Citrus Sinensis ID: 009965
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 521 | 2.2.26 [Sep-21-2011] | |||||||
| C0LGH8 | 664 | Probable LRR receptor-lik | yes | no | 0.963 | 0.756 | 0.690 | 0.0 | |
| C0LGQ4 | 678 | Probable LRR receptor-lik | no | no | 0.892 | 0.685 | 0.325 | 8e-67 | |
| C0LGU7 | 695 | Probable LRR receptor-lik | no | no | 0.892 | 0.669 | 0.305 | 2e-54 | |
| C0LGU5 | 614 | Probable LRR receptor-lik | no | no | 0.783 | 0.664 | 0.312 | 3e-43 | |
| Q9LYN6 | 499 | Probable inactive recepto | no | no | 0.414 | 0.432 | 0.417 | 5e-41 | |
| Q9SIZ4 | 489 | Inactive receptor-like se | no | no | 0.403 | 0.429 | 0.400 | 3e-40 | |
| Q9SHI2 | 1101 | Leucine-rich repeat recep | no | no | 0.735 | 0.347 | 0.295 | 1e-39 | |
| Q9C9N5 | 685 | Probable inactive leucine | no | no | 0.928 | 0.706 | 0.284 | 4e-39 | |
| C0LGF4 | 591 | LRR receptor-like serine/ | no | no | 0.779 | 0.686 | 0.293 | 1e-38 | |
| Q9FIZ3 | 1252 | LRR receptor-like serine/ | no | no | 0.817 | 0.340 | 0.281 | 2e-37 |
| >sp|C0LGH8|Y1634_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g63430 OS=Arabidopsis thaliana GN=At1g63430 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/510 (69%), Positives = 412/510 (80%), Gaps = 8/510 (1%)
Query: 1 MRSYSSLELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHW 60
MRS L VL G+ F +C+ FA+NE AL FKEAIYEDP LV+SNWN ++DPC W
Sbjct: 1 MRSKYFCSLALVL-GLFFVSCDGFASNEVQALRRFKEAIYEDPLLVMSNWNDPNSDPCDW 59
Query: 61 TGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL 120
TGI CS ++D V+KINIS SS+KGFLAPELG +TYLQELILHGN LIG IPKE+G LK L
Sbjct: 60 TGIYCSPSKDHVIKINISASSIKGFLAPELGQITYLQELILHGNILIGTIPKEIGNLKNL 119
Query: 121 KILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
KILDLG N L GPIP EIG+L+G++ INLQSNGLTG+LPAELGNL L ELH+DRNRLQG
Sbjct: 120 KILDLGNNHLMGPIPAEIGSLSGIMIINLQSNGLTGKLPAELGNLKYLRELHIDRNRLQG 179
Query: 181 AVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
++ SGY + ++ SSAN+ GLC LKVADFSYNFFVG+IPKCLE LP TSFQ
Sbjct: 180 SLLVAGASGYQSKVYSS-NSSANIAGLC--KSLKVADFSYNFFVGNIPKCLENLPRTSFQ 236
Query: 241 GNCLQNKDPKQRATTLCGGAPPARTRAGLS--PKHQAAEDVSKHQSASRPAWLLTLEIVT 298
GNC+QNKD K R+++ C A +T S PKHQ+A+ V+KH AS+P WLL LEIVT
Sbjct: 237 GNCMQNKDLKHRSSSQCANAQLVKTHGSPSAAPKHQSAQMVAKHHRASKPKWLLALEIVT 296
Query: 299 GTMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDH--IYIDSEILKDVVRFSRQELE 356
G+MVG+L LVA F+ + R ++ ++IIPWKKS+SEK+ +Y+DSE+LKDV R +RQELE
Sbjct: 297 GSMVGLLLLVALFSAVHRWNNRSTLIIPWKKSSSEKEKFTVYVDSEMLKDVSRLTRQELE 356
Query: 357 VACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN 416
VACEDFSNIIG S DS +YKGT+KGG EIAVISLC+KEE WTGYLELYFQREVADLAR+N
Sbjct: 357 VACEDFSNIIGLSADSQIYKGTLKGGSEIAVISLCVKEEDWTGYLELYFQREVADLARLN 416
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
HENT KLLGYC+E SPFTRMLVF+YASNGTLYEHLHYGE VSW RRMKIVIGIARGLK
Sbjct: 417 HENTAKLLGYCKEISPFTRMLVFEYASNGTLYEHLHYGEAALVSWARRMKIVIGIARGLK 476
Query: 477 YLHTELGPPFTISELNSSAVYLTEDFSPKV 506
YLH EL PPFTISEL+S+A+YLTEDF+PK+
Sbjct: 477 YLHMELDPPFTISELSSNAIYLTEDFTPKL 506
|
Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|C0LGQ4|MRH1_ARATH Probable LRR receptor-like serine/threonine-protein kinase MRH1 OS=Arabidopsis thaliana GN=MRH1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 254 bits (650), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 171/526 (32%), Positives = 265/526 (50%), Gaps = 61/526 (11%)
Query: 26 TNEFWALTTFKEAIYEDPHLVLSNWNALDA-DPCHWTGIACSDARDRVLKINISGSSLKG 84
T++ AL F+ + DPH L+NWN D C+W+G+ C D + ++L ++SG SL+G
Sbjct: 27 TSQGSALLKFRARVNSDPHGTLANWNVSGINDLCYWSGVTCVDGKVQIL--DLSGYSLEG 84
Query: 85 FLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGL 144
LAPEL L+ L+ LIL N+ G IPKE G + L++LDL N L+G IPPE+ N L
Sbjct: 85 TLAPELSQLSDLRSLILSRNHFSGGIPKEYGSFENLEVLDLRENDLSGQIPPELSNGLSL 144
Query: 145 VKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANL 204
+ L N + + ++ L S E+ L ++ P S I+ +
Sbjct: 145 KHLLLSGNKFSDDMRIKIVRLQSSYEVRLKKS------PKLSPLAVLGCINRKLGHCVSR 198
Query: 205 TGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNKDPKQRATTL-------- 256
+ + +++ F + + L+ PS + + + ++ + + L
Sbjct: 199 NRIIQVKKVEAIVFRIK---ATSRRFLKAFPSFLEETDIYKRRELLEETSNLAAEPAPSA 255
Query: 257 --------------CGGAPPARTRAG-----------LSPKHQAAEDVSKHQ-------S 284
G+ PA T A K + D+SK+Q
Sbjct: 256 PSPSPGIITEASPRSSGSFPAVTNAKKRRPPLVPPVPSPDKGSTSPDISKNQPQDNKQSK 315
Query: 285 ASRPAWLLTLEIVTGTMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDHIYIDSEIL 344
S+ WL + I + VG+L +VA ++ K I PWK S + + +
Sbjct: 316 GSKHVWLYVV-IAVASFVGLLIIVAVIFFCRKRAVKS--IGPWKTGLSGQ----LQKAFV 368
Query: 345 KDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKE-EHWTGYLEL 403
V + +R ELE ACEDFSNII + VYKGT+ G EIAV S I E + WT +E+
Sbjct: 369 TGVPKLNRSELETACEDFSNIIETFDGYTVYKGTLSSGVEIAVASTAIAESKEWTRAMEM 428
Query: 404 YFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTR 463
++R++ L+RINH+N L+GYC E PF RM+VF+YA NGTL+EHLH E + W+
Sbjct: 429 AYRRKIDTLSRINHKNFVNLIGYCEEDDPFNRMMVFEYAPNGTLFEHLHDKETEHLDWSA 488
Query: 464 RMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPL 509
RM+I++G A L+++H + PP ++ NSS +YLT+D++ KVS +
Sbjct: 489 RMRIIMGTAYCLQHMHG-MNPPMAHTDFNSSEIYLTDDYAAKVSEI 533
|
May be involved in the regulation of root hairs development. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGU7|Y5458_ARATH Probable LRR receptor-like serine/threonine-protein kinase At5g45840 OS=Arabidopsis thaliana GN=At5g45840 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 213 bits (543), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 164/537 (30%), Positives = 243/537 (45%), Gaps = 72/537 (13%)
Query: 30 WALTTFKEAIYEDPHLVLSNWNALDADP-CHWTGIACSDARDRVLKINISGSSLKGFLAP 88
+ L F+ + DPH L+NWN D D C W G+ C D ++V +N+SG SL G LAP
Sbjct: 35 FVLLKFRARVDSDPHGTLANWNVSDHDHFCSWFGVTCVD--NKVQMLNLSGCSLGGTLAP 92
Query: 89 ELGLLTYLQELIL------------------------HGNNLIGIIPKELGLLKRLKILD 124
EL L+ L+ LIL NNL G++P EL + + L
Sbjct: 93 ELSQLSELRSLILSKNKLSGDIPNEFASFAKLEFLDLRDNNLNGVVPPELNKVLTPENLL 152
Query: 125 LGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAE--------LGNLISLEELHLDRN 176
L N+ G + + L L K+ + N + A+ LG +S L + RN
Sbjct: 153 LSGNKFAGFMTVKFLRLQSLYKVQMNKNRELSSVSADVLDCVNRKLGYCVSRRSL-ITRN 211
Query: 177 RLQGAV-------------PAGSNSGYTANIH------GMYASSANLTGLCHLSQLKVAD 217
+ + V Y N H ++ L +L+ + D
Sbjct: 212 KAKAFVLRIRATSRHYMVRRESHGKNYVVNYHPSENETSIFKRRELLEETSNLAAMPAPD 271
Query: 218 FSYNFFVGSIPKCLEYL-PSTSFQGNCLQNKDPKQRATTLCGGAPPARTRAGLSPKHQAA 276
P+ + + P +S L N K+R L + P +
Sbjct: 272 TP-----SPSPEIITIVFPRSSGSFPALTNA--KKRIPPLIPPSSPPPLPTNNTIASDPP 324
Query: 277 EDVSKHQSASRPAWLLTLEIVTGTMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDH 336
+ + WL + I V +L +VA ++ K I PWK S +
Sbjct: 325 RKFEEKSKGFKDVWLYVV-IGVAAFVAMLIIVAVIFFFRKRAVKS--IGPWKTGLSGQ-- 379
Query: 337 IYIDSEILKDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKE-E 395
+ + V + +R ELE ACEDFSNII + VYKGT+ G EIAV S I E
Sbjct: 380 --LQKAFVTGVPKLNRSELETACEDFSNIIEAFDGYTVYKGTLSSGVEIAVASTAILETR 437
Query: 396 HWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE 455
WT +E+ ++R + ++R+NH+N L+GYC E PF RM+VF+YA NGTL+EHLH E
Sbjct: 438 EWTRAMEMTYRRRIDTMSRVNHKNFINLIGYCEEDEPFNRMMVFEYAPNGTLFEHLHDKE 497
Query: 456 RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512
+ W R +I++G A L+Y+H EL PP + ++L SSA+YLT+D++ KV + S
Sbjct: 498 MEHLDWNARTRIIMGTAYCLQYMH-ELNPPISHTKLVSSAIYLTDDYAAKVGEVPFS 553
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGU5|Y5457_ARATH Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 154/493 (31%), Positives = 213/493 (43%), Gaps = 85/493 (17%)
Query: 28 EFWALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGFLA 87
E AL + K + +D VLS W+ DPC W + CS +GF+
Sbjct: 39 EVAALMSVKNKM-KDEKEVLSGWDINSVDPCTWNMVGCSS---------------EGFVV 82
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
L + L GI+ +G L L L L NQLTGPIP E+G L+ L +
Sbjct: 83 ----------SLEMASKGLSGILSTSIGELTHLHTLLLQNNQLTGPIPSELGQLSELETL 132
Query: 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL 207
+L N +G +PA LG L L L L RN L G VP A L+GL
Sbjct: 133 DLSGNRFSGEIPASLGFLTHLNYLRLSRNLLSGQVPH---------------LVAGLSGL 177
Query: 208 CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNKDPKQRATTLCGGAPPARTRA 267
L D S+N G P GN Q LC A P R
Sbjct: 178 SFL------DLSFNNLSGPTPNI--SAKDYRIVGNAFLCGPASQE---LCSDATPVRNAT 226
Query: 268 GLSPKHQAAEDVSKHQSASRPAWLLTLEIVTGTMVGVLFLVAGFTGLQRCKSKPSIIIPW 327
GLS K D SKH S IV ++ ++FL + W
Sbjct: 227 GLSEK-----DNSKHHSL---VLSFAFGIVVAFIISLMFLF--------------FWVLW 264
Query: 328 KKSASEKDHIYIDSEI-LKDVVRFSRQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPE 384
+S + H+ D E + + RFS +E++ A +FS NI+G +VYKG + G
Sbjct: 265 HRSRLSRSHVQQDYEFEIGHLKRFSFREIQTATSNFSPKNILGQGGFGMVYKGYLPNGTV 324
Query: 385 IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASN 444
+AV L K+ +TG E+ FQ EV + H N +L G+C +P RMLV+ Y N
Sbjct: 325 VAVKRL--KDPIYTG--EVQFQTEVEMIGLAVHRNLLRLFGFCM--TPEERMLVYPYMPN 378
Query: 445 GTLYEHL--HYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF 502
G++ + L +YGE+ + W RR+ I +G ARGL YLH + P ++ ++ + L E F
Sbjct: 379 GSVADRLRDNYGEKPSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESF 438
Query: 503 SPKVSPLCLSFLL 515
V L+ LL
Sbjct: 439 EAIVGDFGLAKLL 451
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LYN6|Y3565_ARATH Probable inactive receptor-like protein kinase At3g56050 OS=Arabidopsis thaliana GN=At3g56050 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 93/223 (41%), Positives = 137/223 (61%), Gaps = 7/223 (3%)
Query: 294 LEIVTGTMVGVLFLVAGFTGLQRCKSKPSIII-PWKKSASEKDHIYIDSEILKDVVRFSR 352
+ IV G + G +F++ TG+ KSK + PW+ S + + + V + R
Sbjct: 145 IPIVAGCIAGAVFILLLATGVFFFKSKAGKSVNPWRTGLSGQ----LQKVFITGVPKLKR 200
Query: 353 QELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKE-EHWTGYLELYFQREVAD 411
E+E ACEDFSN+IGS P ++KGT+ G EIAV S+ + WT +E+ F++++
Sbjct: 201 SEIEAACEDFSNVIGSCPIGTLFKGTLSSGVEIAVASVATASAKEWTNNIEMQFRKKIEM 260
Query: 412 LARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGI 471
L++INH+N LLGYC E PFTR+LVF+YASNGT++EHLHY E + W R++I +GI
Sbjct: 261 LSKINHKNFVNLLGYCEEEEPFTRILVFEYASNGTVFEHLHYKESEHLDWVMRLRIAMGI 320
Query: 472 ARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514
A L ++H L PP S L SS+V LTED++ K++ +L
Sbjct: 321 AYCLDHMHG-LKPPIVHSNLLSSSVQLTEDYAVKIADFNFGYL 362
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9SIZ4|Y2027_ARATH Inactive receptor-like serine/threonine-protein kinase At2g40270 OS=Arabidopsis thaliana GN=At2g40270 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 131/217 (60%), Gaps = 7/217 (3%)
Query: 293 TLEIVTGTMVGVLFLVAGFTGLQRCKSKPSIII-PWKKSASEKDHIYIDSEILKDVVRFS 351
++ +V G + G FL+ TGL SK + PW+ S + + + +
Sbjct: 136 SVPLVVGCVGGAFFLLLVATGLYFFTSKAGKTVNPWRTGLSGQ----LQKVFVTGIPVLK 191
Query: 352 RQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIK-EEHWTGYLELYFQREVA 410
R E+E ACEDFSN+IGS P ++KGT+ G EIAV S + W E++F++++
Sbjct: 192 RSEIEAACEDFSNVIGSCPIGKLFKGTLSSGVEIAVASFATTTAKDWKDSTEIHFRKKIE 251
Query: 411 DLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIG 470
L++INH+N LLGYC E PFTR+L+F+YA NG+L+EHLHY E + W R++I +G
Sbjct: 252 MLSKINHKNFANLLGYCEEKEPFTRILIFEYAPNGSLFEHLHYKESEHLDWGMRLRIAMG 311
Query: 471 IARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVS 507
+A L ++H +L PP + L SS++ LTED++ KVS
Sbjct: 312 LAYCLDHMH-QLNPPIAHTNLVSSSLQLTEDYAVKVS 347
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9SHI2|Y1723_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 OS=Arabidopsis thaliana GN=At1g17230 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 137/464 (29%), Positives = 214/464 (46%), Gaps = 81/464 (17%)
Query: 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131
+ ++++SG+ G++A ELG L YL+ L L N L G IP G L RL L LG N L+
Sbjct: 549 IQRLDLSGNKFSGYIAQELGQLVYLEILRLSDNRLTGEIPHSFGDLTRLMELQLGGNLLS 608
Query: 132 GPIPPEIGNLTGL-VKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGY 190
IP E+G LT L + +N+ N L+G +P LGNL LE L+L+ N+L G +PA
Sbjct: 609 ENIPVELGKLTSLQISLNISHNNLSGTIPDSLGNLQMLEILYLNDNKLSGEIPAS----- 663
Query: 191 TANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPK--CLEYLPSTSFQGNCLQNKD 248
+ +L L + + S N VG++P + + S++F GN
Sbjct: 664 ----------------IGNLMSLLICNISNNNLVGTVPDTAVFQRMDSSNFAGN------ 701
Query: 249 PKQRATTLCGGAPPARTRAGLSPKHQAAEDVSKHQSASRPAWLLT------LEIVTGTMV 302
LC + + + + H S S+ WL+ + +T ++
Sbjct: 702 -----HGLC------------NSQRSHCQPLVPH-SDSKLNWLINGSQRQKILTITCIVI 743
Query: 303 GVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDHIYIDSEILKDVVR--------FSRQE 354
G +FL+ F GL C W E + ++ + DV+ F+ Q
Sbjct: 744 GSVFLIT-FLGL--C---------WTIKRREPAFVALEDQTKPDVMDSYYFPKKGFTYQG 791
Query: 355 LEVACEDFSN--IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADL 412
L A +FS ++G VYK M GG IAV L + E + + F+ E++ L
Sbjct: 792 LVDATRNFSEDVVLGRGACGTVYKAEMSGGEVIAVKKLNSRGEGASS--DNSFRAEISTL 849
Query: 413 ARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGER-CQVSWTRRMKIVIGI 471
+I H N KL G+C + + +L+++Y S G+L E L GE+ C + W R +I +G
Sbjct: 850 GKIRHRNIVKLYGFCYHQN--SNLLLYEYMSKGSLGEQLQRGEKNCLLDWNARYRIALGA 907
Query: 472 ARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
A GL YLH + P ++ S+ + L E F V L+ L+
Sbjct: 908 AEGLCYLHHDCRPQIVHRDIKSNNILLDERFQAHVGDFGLAKLI 951
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9C9N5|Y1668_ARATH Probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 OS=Arabidopsis thaliana GN=At1g66830 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 164/576 (28%), Positives = 249/576 (43%), Gaps = 92/576 (15%)
Query: 7 LELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACS 66
L L F+L+ FA + ++ AL +FK++I V +NWN+ D++PC W G+ C
Sbjct: 6 LILCFILTH-FFAIATSL-NDQGLALLSFKQSIQNQSDSVFTNWNSSDSNPCSWQGVTC- 62
Query: 67 DARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLG 126
+ RV+ I + L G L P +G L L+ + L N+ G +P EL LK L+ L L
Sbjct: 63 NYDMRVVSIRLPNKRLSGSLDPSIGSLLSLRHINLRDNDFQGKLPVELFGLKGLQSLVLS 122
Query: 127 TNQLTGPIPPEIGNLTGLVKIN------------------------LQSNGLTGRLPAEL 162
N +G +P EIG+L L+ ++ L N +G LP L
Sbjct: 123 GNSFSGFVPEEIGSLKSLMTLDLSENSFNGSISLSLIPCKKLKTLVLSKNSFSGDLPTGL 182
Query: 163 G-NLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANL------TGLCHLSQLKV 215
G NL+ L L+L NRL G +P + G N+ G S N T L +L +L
Sbjct: 183 GSNLVHLRTLNLSFNRLTGTIP--EDVGSLENLKGTLDLSHNFFSGMIPTSLGNLPELLY 240
Query: 216 ADFSYNFFVGSIPKCLEYLPS--TSFQGNCLQNKDPKQRATTLCGGAPPARTRAGLSPKH 273
D SYN G IPK L + +FQGN LCG P +
Sbjct: 241 VDLSYNNLSGPIPKFNVLLNAGPNAFQGNPF-----------LCG--LPIKISCSTRNTQ 287
Query: 274 QAAEDVSKHQSASRPAWLLTLEIVTGTMVGVLFLVAGFTGLQRCKS-------------- 319
+ ++ + L GT+ G++FL + F R S
Sbjct: 288 VVPSQLYTRRANHHSRLCIILTATGGTVAGIIFLASLFIYYLRKASARANKDQNNRTCHI 347
Query: 320 --------KPSIIIPWKKSASEKDHIYIDSEILKDVVRFSRQELEVACEDF----SNIIG 367
KP + +K SE + +D + V E+E + + ++G
Sbjct: 348 NEKLKKTTKPEFLC-FKTGNSESE--TLDENKNQQVFMPMDPEIEFDLDQLLKASAFLLG 404
Query: 368 SSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYC 427
S LVYK ++ G +AV L +++ W E F +V +A+I H N L C
Sbjct: 405 KSRIGLVYKVVLENGLMLAVRRL--EDKGWLRLKE--FLADVEAMAKIKHPNVLNLKACC 460
Query: 428 RESSPFTRMLVFDYASNGTLYEHLH---YGERC-QVSWTRRMKIVIGIARGLKYLHTELG 483
SP ++L++DY NG L + C Q++WT R+KI+ GIA+GL Y+H E
Sbjct: 461 W--SPEEKLLIYDYIPNGDLGSAIQGRPGSVSCKQLTWTVRLKILRGIAKGLTYIH-EFS 517
Query: 484 PP-FTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
P + +N+S + L + PKVS L ++ +S
Sbjct: 518 PKRYVHGHINTSNILLGPNLEPKVSGFGLGRIVDTS 553
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|C0LGF4|FEI1_ARATH LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 146/498 (29%), Positives = 221/498 (44%), Gaps = 92/498 (18%)
Query: 31 ALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGFLAPEL 90
AL +F+ A+ + W D DPC+W G+ C RV+ +N
Sbjct: 36 ALLSFRNAVTRSDSFI-HQWRPEDPDPCNWNGVTCDAKTKRVITLN-------------- 80
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150
LTY + ++G +P ++G L L++L L N L G IP +GN T L +I+LQ
Sbjct: 81 --LTY--------HKIMGPLPPDIGKLDHLRLLMLHNNALYGAIPTALGNCTALEEIHLQ 130
Query: 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHL 210
SN TG +PAE+G+L L++L + N L G +PA L L
Sbjct: 131 SNYFTGPIPAEMGDLPGLQKLDMSSNTLSGPIPAS---------------------LGQL 169
Query: 211 SQLKVADFSYNFFVGSIPK--CLEYLPSTSFQGN---CLQNKDPKQRATTLCGGAPPART 265
+L + S NF VG IP L SF GN C ++ D + + G P + +
Sbjct: 170 KKLSNFNVSNNFLVGQIPSDGVLSGFSKNSFIGNLNLCGKHVDVVCQDDS---GNPSSHS 226
Query: 266 RAGLSPKHQAAEDVSKHQSASRPAWLLTLEIVTGTMVGVLFLVA--GFTG--LQRCKSKP 321
++G + K + + L I VG L LVA F G L + K
Sbjct: 227 QSGQNQKKNSGK----------------LLISASATVGALLLVALMCFWGCFLYKKLGKV 270
Query: 322 SIIIPWKKSASEKDHIYIDSEI---LKDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGT 378
I K + ++ KD+++ +LE+ E+ +IIG VYK
Sbjct: 271 EIKSLAKDVGGGASIVMFHGDLPYSSKDIIK----KLEMLNEE--HIIGCGGFGTVYKLA 324
Query: 379 MKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438
M G A+ + E + + +F+RE+ L I H L GYC +SP +++L+
Sbjct: 325 MDDGKVFALKRILKLNEGF----DRFFERELEILGSIKHRYLVNLRGYC--NSPTSKLLL 378
Query: 439 FDYASNGTLYEHLH-YGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVY 497
+DY G+L E LH GE Q+ W R+ I+IG A+GL YLH + P ++ SS +
Sbjct: 379 YDYLPGGSLDEALHERGE--QLDWDSRVNIIIGAAKGLSYLHHDCSPRIIHRDIKSSNIL 436
Query: 498 LTEDFSPKVSPLCLSFLL 515
L + +VS L+ LL
Sbjct: 437 LDGNLEARVSDFGLAKLL 454
|
Involved in the signaling pathway that regulates cell wall function, including cellulose biosynthesis, likely via an 1-aminocyclopropane-1-carboxylic acid (ACC)-mediated signal (a precursor of ethylene). Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FIZ3|GSO2_ARATH LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 139/493 (28%), Positives = 218/493 (44%), Gaps = 67/493 (13%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
++IS +SL G + ELGL L + L+ N L G+IP LG L L L L +N+ G +
Sbjct: 629 LDISRNSLSGIIPVELGLCKKLTHIDLNNNYLSGVIPTWLGKLPLLGELKLSSNKFVGSL 688
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANI 194
P EI +LT ++ + L N L G +P E+GNL +L L+L+ N+L G +P S G + +
Sbjct: 689 PTEIFSLTNILTLFLDGNSLNGSIPQEIGNLQALNALNLEENQLSGPLP--STIGKLSKL 746
Query: 195 HGMYASSANLTG-----LCHLSQLKVA-DFSYNFFVGSIPKCLEYLP---STSFQGNCLQ 245
+ S LTG + L L+ A D SYN F G IP + LP S N L
Sbjct: 747 FELRLSRNALTGEIPVEIGQLQDLQSALDLSYNNFTGRIPSTISTLPKLESLDLSHNQLV 806
Query: 246 NKDPKQRA------------TTLCGGAPPARTR---------AGL--SPKHQAAEDVSKH 282
+ P Q L G +R AGL SP SK+
Sbjct: 807 GEVPGQIGDMKSLGYLNLSYNNLEGKLKKQFSRWQADAFVGNAGLCGSPLSHCNRAGSKN 866
Query: 283 QSASRPAWLLTLEIVTG-------TMVGVLFLVAGFTGLQRCKSKPSIII--------PW 327
Q + P ++ + ++ +V +LF ++ + S P
Sbjct: 867 QRSLSPKTVVIISAISSLAAIALMVLVIILFFKQNHDLFKKVRGGNSAFSSNSSSSQAPL 926
Query: 328 KKSASEKDHIYIDSEILKDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAV 387
+ K I D + + + +E +IGS VYK +K G IAV
Sbjct: 927 FSNGGAKSDIKWDD--IMEATHYLNEEF---------MIGSGGSGKVYKAELKNGETIAV 975
Query: 388 ISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTL 447
+ K++ + F REV L I H + KL+GYC + +L+++Y +NG++
Sbjct: 976 KKILWKDDLMSNK---SFNREVKTLGTIRHRHLVKLMGYCSSKADGLNLLIYEYMANGSV 1032
Query: 448 YEHLHYGERCQ----VSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503
++ LH E + + W R+KI +G+A+G++YLH + PP ++ SS V L +
Sbjct: 1033 WDWLHANENTKKKEVLGWETRLKIALGLAQGVEYLHYDCVPPIVHRDIKSSNVLLDSNIE 1092
Query: 504 PKVSPLCLSFLLV 516
+ L+ +L
Sbjct: 1093 AHLGDFGLAKILT 1105
|
Together with GSO1, receptor-like serine/threonine-kinase required during the development of the epidermal surface in embryos and cotyledons. Involved in the nuclear division phase of megagametogenesis. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 521 | ||||||
| 255537421 | 690 | receptor kinase, putative [Ricinus commu | 0.967 | 0.730 | 0.786 | 0.0 | |
| 225426379 | 660 | PREDICTED: probable LRR receptor-like se | 0.971 | 0.766 | 0.777 | 0.0 | |
| 225426381 | 654 | PREDICTED: probable LRR receptor-like se | 0.959 | 0.764 | 0.771 | 0.0 | |
| 356497232 | 662 | PREDICTED: probable LRR receptor-like se | 0.971 | 0.764 | 0.725 | 0.0 | |
| 147800397 | 636 | hypothetical protein VITISV_020977 [Viti | 0.925 | 0.757 | 0.736 | 0.0 | |
| 356540452 | 662 | PREDICTED: probable LRR receptor-like se | 0.971 | 0.764 | 0.719 | 0.0 | |
| 356528148 | 661 | PREDICTED: probable LRR receptor-like se | 0.971 | 0.765 | 0.722 | 0.0 | |
| 224053933 | 646 | predicted protein [Populus trichocarpa] | 0.942 | 0.760 | 0.756 | 0.0 | |
| 356511498 | 633 | PREDICTED: probable LRR receptor-like se | 0.909 | 0.748 | 0.747 | 0.0 | |
| 357481645 | 672 | hypothetical protein MTR_5g010440 [Medic | 0.978 | 0.758 | 0.706 | 0.0 |
| >gi|255537421|ref|XP_002509777.1| receptor kinase, putative [Ricinus communis] gi|223549676|gb|EEF51164.1| receptor kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 832 bits (2148), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/510 (78%), Positives = 442/510 (86%), Gaps = 6/510 (1%)
Query: 1 MRSYSSL-ELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCH 59
MRS++ L +LLFV++ VLF C +F +E ALTTFKEAI+EDP LVLSNWN LD+DPC
Sbjct: 1 MRSHTPLVQLLFVIASVLFVVCESFPKDEVEALTTFKEAIFEDPLLVLSNWNTLDSDPCD 60
Query: 60 WTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKR 119
W+GIACS ARDRV+KINI+G+SL+GF+ PELG +TYLQEL+LHGNNLIG IPKELG+LK
Sbjct: 61 WSGIACSFARDRVMKINITGASLRGFIPPELGRITYLQELVLHGNNLIGPIPKELGMLKY 120
Query: 120 LKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
LK+LDLG NQLTGPIPPEI NL +++INLQSNGLTG LP ELG L LEEL LDRNRLQ
Sbjct: 121 LKVLDLGVNQLTGPIPPEIANLNNVMRINLQSNGLTGHLPPELGTLKYLEELRLDRNRLQ 180
Query: 180 GAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSF 239
G VPAG NS + +N HGMYAS N +GLC SQLKVAD SYNFFVGSIPKCL+YLPSTSF
Sbjct: 181 GTVPAGGNSDFPSNAHGMYAS--NSSGLCQASQLKVADLSYNFFVGSIPKCLKYLPSTSF 238
Query: 240 QGNCLQNKDPKQRATTLCGGAPPARTRAGLSPKHQAAEDVSK-HQSASRPAWLLTLEIVT 298
QGNCL NKDPKQR+ CGGAPPAR + KHQ AEDVSK HQ AS+PAWLL LEIVT
Sbjct: 239 QGNCLHNKDPKQRSAAQCGGAPPARAHQTFNSKHQPAEDVSKQHQGASKPAWLLALEIVT 298
Query: 299 GTMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDH--IYIDSEILKDVVRFSRQELE 356
GTMVG LFLVA T QRC SK SIIIPWKKSAS+ DH +YIDSE+LKDV RFSRQELE
Sbjct: 299 GTMVGSLFLVAVLTAFQRCNSKSSIIIPWKKSASQNDHMAVYIDSEMLKDVARFSRQELE 358
Query: 357 VACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN 416
VACEDFSNIIGS PDSLVYKG +KGGPEIAVISLCIKEEHWTGYLELYFQ+EVADLAR++
Sbjct: 359 VACEDFSNIIGSCPDSLVYKGNIKGGPEIAVISLCIKEEHWTGYLELYFQKEVADLARLD 418
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
HENTGKLLGYCRES+PFTRMLVF+YASNGTLYEHLHYGE CQ+SWTRRMKI++GIARGLK
Sbjct: 419 HENTGKLLGYCRESNPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRMKIILGIARGLK 478
Query: 477 YLHTELGPPFTISELNSSAVYLTEDFSPKV 506
YLHTEL PPFTISELNSSAVYLTEDFSPKV
Sbjct: 479 YLHTELDPPFTISELNSSAVYLTEDFSPKV 508
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225426379|ref|XP_002271860.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430 isoform 2 [Vitis vinifera] gi|297742540|emb|CBI34689.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 828 bits (2138), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/508 (77%), Positives = 440/508 (86%), Gaps = 2/508 (0%)
Query: 1 MRSYSSLELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHW 60
MRS SSL+LL+V+ GVLFA+C+AFA+NE AL T KE IYEDP VLS WN +D+DPC W
Sbjct: 1 MRSSSSLQLLWVVFGVLFASCDAFASNEVSALNTLKEGIYEDPLTVLSTWNTVDSDPCDW 60
Query: 61 TGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL 120
+GI CS+ARD V+KINISGSSLKGFL PELG L+ LQELILHGNNLIG+IPKE+G LK L
Sbjct: 61 SGITCSEARDHVIKINISGSSLKGFLTPELGQLSSLQELILHGNNLIGVIPKEIGSLKNL 120
Query: 121 KILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
K+LDLG NQLTGPIPPEIGNLT +VKINL+SNGL+GRLP ELGNL LEEL LDRNRL+G
Sbjct: 121 KVLDLGMNQLTGPIPPEIGNLTSIVKINLESNGLSGRLPPELGNLRHLEELRLDRNRLEG 180
Query: 181 AVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
VP + S + ++++GMYASS N+TGLC SQ KVADFSYNFFVGSIPKCL YLP TSFQ
Sbjct: 181 TVPGSNTSNFVSDVNGMYASSRNITGLCRSSQFKVADFSYNFFVGSIPKCLSYLPRTSFQ 240
Query: 241 GNCLQNKDPKQRATTLCGGAPPARTRAGLSPKHQAAEDVSKHQSASRPAWLLTLEIVTGT 300
GNCLQ+ P+QR+T C PPA++ G+ PKHQ D KHQ S+PAWLL LEIVTGT
Sbjct: 241 GNCLQDTAPRQRSTVQCAVPPPAKSHPGVGPKHQPTLDGPKHQDTSKPAWLLALEIVTGT 300
Query: 301 MVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDH--IYIDSEILKDVVRFSRQELEVA 358
MVG L ++A T LQRCKSK SIIIPWKKSASEK+H +YIDSE+LKDV RFSRQELEVA
Sbjct: 301 MVGSLCIIALLTALQRCKSKSSIIIPWKKSASEKEHMQVYIDSEMLKDVFRFSRQELEVA 360
Query: 359 CEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHE 418
CEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHW GYLELYFQ+EVADLAR+NHE
Sbjct: 361 CEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWMGYLELYFQKEVADLARLNHE 420
Query: 419 NTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
NTGKLLGYCRESSPFTRMLVF+YASNGTLYEHLHYGE CQ+SWTRRMKI+IGI RGLKYL
Sbjct: 421 NTGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRMKIIIGIGRGLKYL 480
Query: 479 HTELGPPFTISELNSSAVYLTEDFSPKV 506
HTEL PPFTISELNSSAVY+TEDFSPK+
Sbjct: 481 HTELDPPFTISELNSSAVYITEDFSPKL 508
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225426381|ref|XP_002271829.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430 isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 809 bits (2089), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/508 (77%), Positives = 432/508 (85%), Gaps = 8/508 (1%)
Query: 1 MRSYSSLELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHW 60
MRS SSL+LL+V+ GVLFA+C+AFA+NE AL T KE IYEDP VLS WN +D+DPC W
Sbjct: 1 MRSSSSLQLLWVVFGVLFASCDAFASNEVSALNTLKEGIYEDPLTVLSTWNTVDSDPCDW 60
Query: 61 TGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL 120
+GI CS+ARD V+KINISGSSLKGFL PELG L+ LQELILHGNNLIG+IPKE+G LK L
Sbjct: 61 SGITCSEARDHVIKINISGSSLKGFLTPELGQLSSLQELILHGNNLIGVIPKEIGSLKNL 120
Query: 121 KILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
K+LDLG NQLTGPIPPEIGNLT +VKINL+SNGL+GRLP ELGNL LEEL LDRNRL+G
Sbjct: 121 KVLDLGMNQLTGPIPPEIGNLTSIVKINLESNGLSGRLPPELGNLRHLEELRLDRNRLEG 180
Query: 181 AVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
VP + YASS N+TGLC SQ KVADFSYNFFVGSIPKCL YLP TSFQ
Sbjct: 181 TVPVFHKK------NKKYASSRNITGLCRSSQFKVADFSYNFFVGSIPKCLSYLPRTSFQ 234
Query: 241 GNCLQNKDPKQRATTLCGGAPPARTRAGLSPKHQAAEDVSKHQSASRPAWLLTLEIVTGT 300
GNCLQ+ P+QR+T C PPA++ G+ PKHQ D KHQ S+PAWLL LEIVTGT
Sbjct: 235 GNCLQDTAPRQRSTVQCAVPPPAKSHPGVGPKHQPTLDGPKHQDTSKPAWLLALEIVTGT 294
Query: 301 MVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDH--IYIDSEILKDVVRFSRQELEVA 358
MVG L ++A T LQRCKSK SIIIPWKKSASEK+H +YIDSE+LKDV RFSRQELEVA
Sbjct: 295 MVGSLCIIALLTALQRCKSKSSIIIPWKKSASEKEHMQVYIDSEMLKDVFRFSRQELEVA 354
Query: 359 CEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHE 418
CEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHW GYLELYFQ+EVADLAR+NHE
Sbjct: 355 CEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWMGYLELYFQKEVADLARLNHE 414
Query: 419 NTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
NTGKLLGYCRESSPFTRMLVF+YASNGTLYEHLHYGE CQ+SWTRRMKI+IGI RGLKYL
Sbjct: 415 NTGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRMKIIIGIGRGLKYL 474
Query: 479 HTELGPPFTISELNSSAVYLTEDFSPKV 506
HTEL PPFTISELNSSAVY+TEDFSPK+
Sbjct: 475 HTELDPPFTISELNSSAVYITEDFSPKL 502
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356497232|ref|XP_003517466.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 776 bits (2004), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/510 (72%), Positives = 422/510 (82%), Gaps = 4/510 (0%)
Query: 1 MRSYSSLELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHW 60
M+ + L L +S + F + +NE WAL +FKEA+YEDP+ VLSNW+ +++DPC+W
Sbjct: 1 MKPCTLLLFLSFISTLSFVVSDTVPSNEVWALRSFKEAVYEDPYQVLSNWDTVESDPCNW 60
Query: 61 TGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL 120
G+ C+ RD V+K+NISGSSLKGFLAPELG +TYLQ LILHGNN IG IP+ELG+L+ L
Sbjct: 61 FGVLCTMVRDHVIKLNISGSSLKGFLAPELGQITYLQALILHGNNFIGTIPRELGVLESL 120
Query: 121 KILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
K+LDLG NQLTGPIPPEIGNLT VKINLQSNGLTGRLP ELGNL L+EL LDRNRLQG
Sbjct: 121 KVLDLGMNQLTGPIPPEIGNLTQAVKINLQSNGLTGRLPPELGNLRYLQELRLDRNRLQG 180
Query: 181 AVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
+PAG +S + +N+HGMYAS N+TG C SQLKVADFS+NF VG IPKCLEYLP SFQ
Sbjct: 181 PIPAGGSSNFASNMHGMYASKENVTGFCRSSQLKVADFSFNFLVGRIPKCLEYLPRLSFQ 240
Query: 241 GNCLQNKDPKQRATTLCGGAPP--ARTRAGLSPKHQAAEDVSKHQSASRPAWLLTLEIVT 298
GNCLQ ++ KQR++ C GA P A+++ ++P HQ AE VSKH AS+P WLL LEIVT
Sbjct: 241 GNCLQGQELKQRSSIQCAGASPASAKSQPVVNPNHQPAEYVSKHHRASKPVWLLALEIVT 300
Query: 299 GTMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDH--IYIDSEILKDVVRFSRQELE 356
GTMVG LFLVA QRC K SIIIPWKKS S+KDH +YID E LKDV R+SRQELE
Sbjct: 301 GTMVGSLFLVAVLAAFQRCNKKSSIIIPWKKSGSQKDHTAVYIDPEFLKDVRRYSRQELE 360
Query: 357 VACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN 416
VACEDFSNIIGSSPDS+VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLAR+N
Sbjct: 361 VACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARLN 420
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
HEN GKLLGYCRE +PFTRMLVFDYASNGTL++HLHY E CQ SWTRRMKI IGIARGLK
Sbjct: 421 HENIGKLLGYCREDTPFTRMLVFDYASNGTLHDHLHYEEGCQFSWTRRMKIAIGIARGLK 480
Query: 477 YLHTELGPPFTISELNSSAVYLTEDFSPKV 506
YLHTE+ PPFTISELNSSAVYLTE+FSPK+
Sbjct: 481 YLHTEVEPPFTISELNSSAVYLTEEFSPKL 510
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147800397|emb|CAN66410.1| hypothetical protein VITISV_020977 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 774 bits (1999), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/508 (73%), Positives = 418/508 (82%), Gaps = 26/508 (5%)
Query: 1 MRSYSSLELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHW 60
MRS SSL+LL+V+ GVLFA+C+AFA+NE AL T KE IYEDP VLS WN +D+DPC W
Sbjct: 1 MRSSSSLQLLWVVFGVLFASCDAFASNEVSALNTLKEGIYEDPLTVLSTWNTVDSDPCDW 60
Query: 61 TGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL 120
+GI CS+ARD V+KI ILHGNNLIG+IPKE+G LK L
Sbjct: 61 SGITCSEARDHVIKI------------------------ILHGNNLIGVIPKEIGSLKNL 96
Query: 121 KILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
K+LDLG NQLTGPIPPEIGNLT +VKINL+SNGL+GRLP ELGNL LEEL LDRNRL+G
Sbjct: 97 KVLDLGMNQLTGPIPPEIGNLTSIVKINLESNGLSGRLPPELGNLRHLEELRLDRNRLEG 156
Query: 181 AVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
VP + S + ++++GMYASS N+TGLC SQ KVADFSYNFFVGSIPKCL YLP TSFQ
Sbjct: 157 TVPGSNTSSFVSDVNGMYASSRNITGLCRSSQFKVADFSYNFFVGSIPKCLSYLPRTSFQ 216
Query: 241 GNCLQNKDPKQRATTLCGGAPPARTRAGLSPKHQAAEDVSKHQSASRPAWLLTLEIVTGT 300
GNCLQ+ P+QR+T C PPA++ G+ KHQ D KHQ S+PAWLL LEIVTGT
Sbjct: 217 GNCLQDTAPRQRSTVQCAVPPPAKSHPGVGXKHQPTLDGPKHQDTSKPAWLLALEIVTGT 276
Query: 301 MVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDH--IYIDSEILKDVVRFSRQELEVA 358
MVG L ++A T LQRCKSK SIIIPWKKSASEK+H +YIDSE+LKDV RFSRQELEVA
Sbjct: 277 MVGSLCIIALLTALQRCKSKSSIIIPWKKSASEKEHMQVYIDSEMLKDVFRFSRQELEVA 336
Query: 359 CEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHE 418
CEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHW GYLELYFQ+EVADLAR+NHE
Sbjct: 337 CEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWMGYLELYFQKEVADLARLNHE 396
Query: 419 NTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
NTGKLLGYCRESSPFTRMLVF+YASNGTLYEHLHYGE CQ+SWTRRMKI+IGI RGLKYL
Sbjct: 397 NTGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRMKIIIGIGRGLKYL 456
Query: 479 HTELGPPFTISELNSSAVYLTEDFSPKV 506
HTEL PPFTISELNSSAVY+TEDFSPK+
Sbjct: 457 HTELDPPFTISELNSSAVYITEDFSPKL 484
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356540452|ref|XP_003538703.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 773 bits (1995), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/510 (71%), Positives = 426/510 (83%), Gaps = 4/510 (0%)
Query: 1 MRSYSSLELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHW 60
M+ +SL L ++S + F + +NE WAL +FKEA+YEDP+ VLSNW+ +++DPC+W
Sbjct: 1 MKPCTSLLFLALISALSFVVSDMVPSNEVWALRSFKEAVYEDPYQVLSNWDTVESDPCNW 60
Query: 61 TGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL 120
G+ C+ RD V+K+NISGSSLKGFLAPELG +TYLQELILHGN+ IG IP+ELG+L+ L
Sbjct: 61 FGVLCTMLRDHVIKLNISGSSLKGFLAPELGQITYLQELILHGNSFIGTIPRELGVLESL 120
Query: 121 KILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
K+LDLG NQLTGPIP EIGNLT +VKINLQSNGLTGRLP ELGNL L+EL LDRNRLQG
Sbjct: 121 KVLDLGMNQLTGPIPAEIGNLTQVVKINLQSNGLTGRLPPELGNLRYLQELQLDRNRLQG 180
Query: 181 AVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
VPAG ++ + +N+HGMYAS N+TG C SQLKVADFS+NF VGSIPKCLEYLP +FQ
Sbjct: 181 PVPAGGSANFASNMHGMYASKENVTGFCRSSQLKVADFSFNFLVGSIPKCLEYLPRLNFQ 240
Query: 241 GNCLQNKDPKQRATTLCGGAPP--ARTRAGLSPKHQAAEDVSKHQSASRPAWLLTLEIVT 298
GNCLQ +D KQR++ C GA P A+++ ++P HQ AE VSKH AS+P WLL LEIVT
Sbjct: 241 GNCLQGQDLKQRSSIQCAGASPASAKSQPVVNPNHQPAEYVSKHHRASKPVWLLALEIVT 300
Query: 299 GTMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDH--IYIDSEILKDVVRFSRQELE 356
GTMVG LFLVA QRC K SIIIPWKKS S+KDH +YID E+LKDV R+SRQELE
Sbjct: 301 GTMVGSLFLVAVLAAFQRCNKKSSIIIPWKKSGSQKDHTAVYIDPELLKDVRRYSRQELE 360
Query: 357 VACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN 416
VACEDFSNIIGSSPDS+VYKGTMKGGPEIAV+SLCI EEHWTGYLELYFQREVADLAR++
Sbjct: 361 VACEDFSNIIGSSPDSVVYKGTMKGGPEIAVVSLCINEEHWTGYLELYFQREVADLARLD 420
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
+EN GKLLGYCRE +PFTRMLVFDYASNGTL++HLHY E CQ SWTRRMKI IGIARGLK
Sbjct: 421 NENIGKLLGYCREDTPFTRMLVFDYASNGTLHDHLHYEEGCQFSWTRRMKIAIGIARGLK 480
Query: 477 YLHTELGPPFTISELNSSAVYLTEDFSPKV 506
YLHTE+ PPFTISELNSSAVYLTE+FSPK+
Sbjct: 481 YLHTEVEPPFTISELNSSAVYLTEEFSPKL 510
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356528148|ref|XP_003532667.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 772 bits (1993), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/509 (72%), Positives = 436/509 (85%), Gaps = 3/509 (0%)
Query: 1 MRSYSSLELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHW 60
M+ Y+SL LL ++S + F + E AL TFKEA+YEDPH+VLSNWN LD+D C W
Sbjct: 1 MKLYTSLLLLGLVSMLSFVASVMIPSGEVLALKTFKEAVYEDPHMVLSNWNTLDSDLCDW 60
Query: 61 TGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL 120
G++C+ RD V+K+N+SG+SL+GFLAPE G +TYLQELILHGN+LIG+IPKELG+L L
Sbjct: 61 NGVSCTATRDHVIKLNLSGASLRGFLAPEFGKITYLQELILHGNSLIGVIPKELGMLNSL 120
Query: 121 KILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
K+LDLG NQLTGPIPPEIGNLT ++KINLQSNGLTGRLP ELG L L+EL LDRN+LQG
Sbjct: 121 KVLDLGMNQLTGPIPPEIGNLTQVMKINLQSNGLTGRLPPELGKLKYLQELRLDRNKLQG 180
Query: 181 AVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
++P G +S +++N+HGMYAS N+TG C LSQLKVADFSYNFFVGSIPKCL YLP +SFQ
Sbjct: 181 SLPGGGSSNFSSNMHGMYASGVNMTGFCRLSQLKVADFSYNFFVGSIPKCLAYLPRSSFQ 240
Query: 241 GNCLQNKDPKQRATTLCGGAPPARTRAGLSPKH-QAAEDVSKHQSASRPAWLLTLEIVTG 299
GNCL KD KQR + C GA PA++ ++P++ A + V+KHQ AS+PAWLL LEIVTG
Sbjct: 241 GNCLHIKDIKQRISVQCAGASPAQSGPVVNPRYLPATKHVTKHQEASKPAWLLALEIVTG 300
Query: 300 TMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDH--IYIDSEILKDVVRFSRQELEV 357
TMVG LF++A + +QRC +KPSIIIPWKKSAS KD+ ++IDSE+LKDV+ +SRQ+LEV
Sbjct: 301 TMVGSLFIIAILSAIQRCNNKPSIIIPWKKSASGKDYMAVHIDSEMLKDVMSYSRQDLEV 360
Query: 358 ACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH 417
ACEDFSNIIGSSPDS+VYKGTMKGGPEIAVISLCIKE++WTGYLELYFQREVADLAR+NH
Sbjct: 361 ACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEDNWTGYLELYFQREVADLARLNH 420
Query: 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
+NTGKLLGYCRESSPFTRMLVF+YASNGTLYEHLHY E CQ+SWTRRMKI+IGIARGLKY
Sbjct: 421 DNTGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYEEGCQLSWTRRMKIIIGIARGLKY 480
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKV 506
LHTE+ P FTISELNS+AVYLTEDFSPK+
Sbjct: 481 LHTEIEPAFTISELNSNAVYLTEDFSPKL 509
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224053933|ref|XP_002298045.1| predicted protein [Populus trichocarpa] gi|222845303|gb|EEE82850.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/509 (75%), Positives = 436/509 (85%), Gaps = 18/509 (3%)
Query: 1 MRSYSSLELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHW 60
MRSY+SL+LL V S +LF TC+ FA +E WALT FKEAIYEDPH+VLS+WNALDADPC W
Sbjct: 1 MRSYASLQLLSVFSLLLFVTCDPFARDEVWALTAFKEAIYEDPHMVLSSWNALDADPCGW 60
Query: 61 TGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL 120
+GI+CS A D V+KINI+G SL+GFLAPELG + +LQ+LILHGNNLIGIIPKELG+LK L
Sbjct: 61 SGISCSFAGDHVVKINITGYSLRGFLAPELGQIKFLQQLILHGNNLIGIIPKELGMLKYL 120
Query: 121 KILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
++LDLG NQLTGPIPPEI NL ++KINLQSNGLTG LP ELGNL SL+EL LDRNR QG
Sbjct: 121 QVLDLGANQLTGPIPPEIANLISVIKINLQSNGLTGSLPPELGNLKSLQELRLDRNRFQG 180
Query: 181 AVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
+VPA S+S +T++ YAS+ NLTGLC S+LKVADFSYNFF GSIPKCL YLPSTSFQ
Sbjct: 181 SVPASSSSDFTSS---AYASNTNLTGLCQASELKVADFSYNFFTGSIPKCLGYLPSTSFQ 237
Query: 241 GNCLQNKDPKQRATTLCGGAPPARTRAGLSPKHQAAEDVS-KHQSASRPAWLLTLEIVTG 299
GNCLQNKD +QR+++LCG AED+S +H AS+PAWLL LEIVTG
Sbjct: 238 GNCLQNKDLRQRSSSLCG------------TYEMPAEDLSNQHPRASKPAWLLALEIVTG 285
Query: 300 TMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDHI--YIDSEILKDVVRFSRQELEV 357
TMVG LFL+A T LQRCK K S+IIPWKKS+S+KDH+ YIDSE+LKDVVRFSR ELEV
Sbjct: 286 TMVGCLFLIAFITALQRCKDKSSLIIPWKKSSSQKDHVTVYIDSEMLKDVVRFSRMELEV 345
Query: 358 ACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH 417
ACEDFSNIIGSSPDSLVYKGT+KGGPEIAVISLCIKEEHWTGYLELYFQREVADLAR+N+
Sbjct: 346 ACEDFSNIIGSSPDSLVYKGTVKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARLNN 405
Query: 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
EN GKLLGYC ES+PFTRMLVF+YASNGTLYEHLHYGE CQ++WTRRMKI+IGIARGLKY
Sbjct: 406 ENAGKLLGYCSESTPFTRMLVFEYASNGTLYEHLHYGEGCQLTWTRRMKIIIGIARGLKY 465
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKV 506
H EL PPFTISELNSS+VYLTEDFSPK+
Sbjct: 466 FHAELDPPFTISELNSSSVYLTEDFSPKL 494
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356511498|ref|XP_003524463.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/483 (74%), Positives = 421/483 (87%), Gaps = 9/483 (1%)
Query: 27 NEFWALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGFL 86
NE AL TFKEA+YEDPH+VLSNWN LD+D C W G++C+ RD V+K+N+SG+SL+GFL
Sbjct: 5 NEVLALKTFKEAVYEDPHMVLSNWNTLDSDLCDWNGVSCTATRDHVIKLNLSGASLRGFL 64
Query: 87 APELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVK 146
APE G +TYLQELILHGN+LIG+IPKELG+LK LK+LDLG NQLTGPIPPEIGNLT ++K
Sbjct: 65 APEFGKITYLQELILHGNSLIGVIPKELGMLKSLKVLDLGMNQLTGPIPPEIGNLTQVMK 124
Query: 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG 206
INLQSNGLTGRLP ELG L L+EL LDRN+LQG++P G +S +++N+HGMYAS NLTG
Sbjct: 125 INLQSNGLTGRLPPELGKLKYLQELRLDRNKLQGSLPGGGSSNFSSNMHGMYASGVNLTG 184
Query: 207 LCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNKDPKQRATTLCGGAPPARTR 266
C SQLKVADFS NFFVGSIPKCL YLP +SFQGNCL KD KQR + C GA
Sbjct: 185 FCRSSQLKVADFSCNFFVGSIPKCLAYLPRSSFQGNCLHIKDIKQRTSVQCAGA------ 238
Query: 267 AGLSPKHQ-AAEDVSKHQSASRPAWLLTLEIVTGTMVGVLFLVAGFTGLQRCKSKPSIII 325
+ ++PK+Q A + V+KHQ AS+PAWLL LEIVTGTMVG LF++A T +QRC +K SIII
Sbjct: 239 SVVNPKYQPATKHVTKHQEASKPAWLLALEIVTGTMVGSLFIIAILTAIQRCNNKSSIII 298
Query: 326 PWKKSASEKDH--IYIDSEILKDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGP 383
PWKKSAS KD+ ++IDSE+LKDV+R+SRQ+LEVACEDFSNIIGSSPDS+VYKGTMKGGP
Sbjct: 299 PWKKSASGKDYMAVHIDSEMLKDVMRYSRQDLEVACEDFSNIIGSSPDSVVYKGTMKGGP 358
Query: 384 EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443
EIAVISLCI+E++WTGYLELYFQREVADLAR+NH+NTGKLLGYCRES+PFTRMLVF+YAS
Sbjct: 359 EIAVISLCIREDNWTGYLELYFQREVADLARLNHDNTGKLLGYCRESNPFTRMLVFEYAS 418
Query: 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503
NGTLYEHLHY E CQ+SWTRRMKI+IGIARGLKYLHTE+ PPFTISELNS+AVYLTEDFS
Sbjct: 419 NGTLYEHLHYEEGCQLSWTRRMKIIIGIARGLKYLHTEIEPPFTISELNSNAVYLTEDFS 478
Query: 504 PKV 506
PK+
Sbjct: 479 PKL 481
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357481645|ref|XP_003611108.1| hypothetical protein MTR_5g010440 [Medicago truncatula] gi|355512443|gb|AES94066.1| hypothetical protein MTR_5g010440 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 749 bits (1934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/514 (70%), Positives = 421/514 (81%), Gaps = 4/514 (0%)
Query: 1 MRSYSSLELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHW 60
M+ +S +L ++S + + +NE WALT+FKEAIYEDP+LVLSNWN L++D C+W
Sbjct: 1 MKFLASFLVLSLISTISLVNSDTLPSNEVWALTSFKEAIYEDPNLVLSNWNMLESDLCNW 60
Query: 61 TGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL 120
G++C+ A D V+K+NISGSSLKGFLA ELG +TYL+ELILHGNNLIG IPKEL +LK L
Sbjct: 61 FGVSCTLAGDHVIKLNISGSSLKGFLAKELGQITYLEELILHGNNLIGTIPKELCVLKSL 120
Query: 121 KILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
++LDLG NQLTGPIPPEIGNL LV INLQSNGLTGR+P E GNL L+EL LDRN+ QG
Sbjct: 121 EVLDLGMNQLTGPIPPEIGNLALLVNINLQSNGLTGRIPHEFGNLRYLKELRLDRNKFQG 180
Query: 181 AVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
VPA +S + +N HGMYAS+ N+TG+C QL+VADFSYNF VGSIPKCLE+LP +FQ
Sbjct: 181 PVPASGSSNFASNTHGMYASNENVTGICRSPQLEVADFSYNFLVGSIPKCLEFLPRLNFQ 240
Query: 241 GNCLQNKDPKQRATTLCGGAPPARTRAGLSPK-HQAAEDVSKHQSASRPAWLLTLEIVTG 299
GNCLQ+ DPKQR +T CGGA PA+++ + + HQ V KH S P WLL LEIV G
Sbjct: 241 GNCLQSNDPKQRPSTQCGGASPAKSQPVVDHQFHQLGNHVRKHHGLSEPTWLLALEIVAG 300
Query: 300 TMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDH--IYIDSEILKDVVRFSRQELEV 357
TMVG + L+A QRC +K SIIIPWKKSAS+K H +YID EILKDV R+SRQELE
Sbjct: 301 TMVGSVCLIAILAAFQRCNNKSSIIIPWKKSASQKYHTAVYIDPEILKDVRRYSRQELEE 360
Query: 358 ACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH 417
ACEDFSNIIGSSPDS+VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVA+LAR+NH
Sbjct: 361 ACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVAELARLNH 420
Query: 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH-YGERCQVSWTRRMKIVIGIARGLK 476
ENTGKLLGYCRES+PF+RMLVFDYASNGTL+EHLH Y E CQ SWTRRMKI+IGIARGLK
Sbjct: 421 ENTGKLLGYCRESNPFSRMLVFDYASNGTLHEHLHCYEEGCQFSWTRRMKIIIGIARGLK 480
Query: 477 YLHTELGPPFTISELNSSAVYLTEDFSPKVSPLC 510
YLHTE+ PPFTISELNSSAVYLTE+F+PKV C
Sbjct: 481 YLHTEVEPPFTISELNSSAVYLTEEFAPKVYSHC 514
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 521 | ||||||
| TAIR|locus:2163056 | 664 | AT5G41180 [Arabidopsis thalian | 0.955 | 0.75 | 0.556 | 4.5e-146 | |
| TAIR|locus:2124102 | 678 | MRH1 "morphogenesis of root ha | 0.454 | 0.349 | 0.383 | 2.6e-57 | |
| TAIR|locus:2182915 | 553 | AT5G07150 [Arabidopsis thalian | 0.666 | 0.627 | 0.314 | 2.3e-50 | |
| TAIR|locus:2078436 | 499 | AT3G56050 [Arabidopsis thalian | 0.474 | 0.494 | 0.370 | 3.3e-40 | |
| TAIR|locus:2063146 | 489 | AT2G40270 [Arabidopsis thalian | 0.493 | 0.525 | 0.365 | 1.9e-37 | |
| TAIR|locus:2171233 | 484 | AT5G58540 [Arabidopsis thalian | 0.332 | 0.357 | 0.435 | 4.4e-36 | |
| TAIR|locus:2013021 | 625 | SERK1 "somatic embryogenesis r | 0.328 | 0.273 | 0.359 | 5.8e-36 | |
| TAIR|locus:2206179 | 592 | FEI1 "FEI 1" [Arabidopsis thal | 0.330 | 0.290 | 0.310 | 7.5e-36 | |
| TAIR|locus:2026097 | 628 | SERK2 "somatic embryogenesis r | 0.328 | 0.272 | 0.359 | 4.9e-35 | |
| TAIR|locus:2033000 | 702 | AT1G25320 [Arabidopsis thalian | 0.495 | 0.367 | 0.317 | 2.8e-34 |
| TAIR|locus:2163056 AT5G41180 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1427 (507.4 bits), Expect = 4.5e-146, P = 4.5e-146
Identities = 291/523 (55%), Positives = 358/523 (68%)
Query: 1 MRSYSSLELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHW 60
+ S L L+ ++ G LF +C+AFA+ E A+ FKEAIY+DP LV+SNWN + PC W
Sbjct: 5 LSSTMQLSLMSLVLGFLFVSCDAFASKEVEAVRRFKEAIYKDPLLVMSNWNVPNLSPCDW 64
Query: 61 TGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQEXXXXXXXXXXXXPXXXXXXXXX 120
GI CS ++D ++KINISG+S++GFL PELG +TYLQE P
Sbjct: 65 NGIKCSPSKDHIIKINISGTSMRGFLVPELGQITYLQELILRGNILMGTIPKEIGKLKKL 124
Query: 121 XXXXXGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
G N LTGPIP EIG L+ + INLQSNGL G+LP E+GNL L+EL + RNRL+G
Sbjct: 125 KILDLGNNHLTGPIPAEIGKLSRIKTINLQSNGLIGKLPPEIGNLKHLKELLIGRNRLRG 184
Query: 181 AVPAGSNSGYTANIHGMYAS--SANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTS 238
++P + + YAS SAN++GLC S KVADFSYNFF G +P CL+YLP TS
Sbjct: 185 SIPIAAKTSKK------YASNPSANISGLCKSSLFKVADFSYNFFEGRVPSCLDYLPITS 238
Query: 239 FQGNCLQNKDPKQRATTLCGGAPPARTRAGLSPKHQAAEDVSKHQSASRPAWLLTLEIVT 298
FQGNC++ D KQR + C AR ++ K KH+ ASR WL EIVT
Sbjct: 239 FQGNCMKTMDVKQRPLSEC-----ARLAVTVAKK--------KHR-ASRQTWLRNFEIVT 284
Query: 299 GTMVGVLFLVAGFTGLQRCXXXXXXXXXXXXXXXEKDH--IYIDSEILKDVVRFSRQELE 356
G+ VG+LFLV F+ C EK+ +Y+DSE+LKDV R++RQELE
Sbjct: 285 GSSVGLLFLVVMFSACSLCKIKRSLIVPWKKSASEKEKFTVYVDSEMLKDVSRYTRQELE 344
Query: 357 VACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN 416
VACEDFSNII SS +S +YKGT+KGG EIAVISLC+KEE+WTGYLEL FQREVA LAR+N
Sbjct: 345 VACEDFSNIIDSSAESQIYKGTIKGGTEIAVISLCVKEENWTGYLELNFQREVAALARLN 404
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
HEN GKLLGYC+ES+PFTRMLVF+YASNGTLY+HLHY + VSW +RMKIVIGIARGLK
Sbjct: 405 HENAGKLLGYCKESTPFTRMLVFEYASNGTLYDHLHYADGSLVSWAKRMKIVIGIARGLK 464
Query: 477 YLHTELGPPFTISELNSSAVYLTEDFSPKVSPL-CLSFLLVSS 518
YLHTEL PPFT+SEL+S+AVYLTEDF+PK+ C + V S
Sbjct: 465 YLHTELHPPFTVSELSSTAVYLTEDFTPKLVDFECWKIIQVRS 507
|
|
| TAIR|locus:2124102 MRH1 "morphogenesis of root hair 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 427 (155.4 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 97/253 (38%), Positives = 143/253 (56%)
Query: 262 PARTRAGLSP---KHQAAEDVSKHQSASRPAWLLTLEIVTGTMVGVLFLVAG-FTGLQRC 317
P+ + SP K+Q ++ K S+ WL + I + VG+L +VA F +R
Sbjct: 292 PSPDKGSTSPDISKNQPQDN--KQSKGSKHVWLYVV-IAVASFVGLLIIVAVIFFCRKRA 348
Query: 318 XXXXXXXXXXXXXXXEKDHIYIDSEILKDVVRFSRQELEVACEDFSNIIGSSPDSLVYKG 377
+K + V + +R ELE ACEDFSNII + VYKG
Sbjct: 349 VKSIGPWKTGLSGQLQKAFV-------TGVPKLNRSELETACEDFSNIIETFDGYTVYKG 401
Query: 378 TMKGGPEIAVISLCIKE-EHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436
T+ G EIAV S I E + WT +E+ ++R++ L+RINH+N L+GYC E PF RM
Sbjct: 402 TLSSGVEIAVASTAIAESKEWTRAMEMAYRRKIDTLSRINHKNFVNLIGYCEEDDPFNRM 461
Query: 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAV 496
+VF+YA NGTL+EHLH E + W+ RM+I++G A L+++H + PP ++ NSS +
Sbjct: 462 MVFEYAPNGTLFEHLHDKETEHLDWSARMRIIMGTAYCLQHMHG-MNPPMAHTDFNSSEI 520
Query: 497 YLTEDFSPKVSPL 509
YLT+D++ KVS +
Sbjct: 521 YLTDDYAAKVSEI 533
|
|
| TAIR|locus:2182915 AT5G07150 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 395 (144.1 bits), Expect = 2.3e-50, Sum P(2) = 2.3e-50
Identities = 120/382 (31%), Positives = 178/382 (46%)
Query: 144 LVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNS-------GYTANIHG 196
+V +NL+ L G L ELGNL L+ L L N G VP N G
Sbjct: 77 VVILNLRDLSLQGTLAPELGNLTHLKSLILRNNSFSGKVPEEVTELQELEILDLCDNNFG 136
Query: 197 M-YASSANLTGLCHL-------SQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNKD 248
+ + L + S ++ + FF P+ + P T Q + N
Sbjct: 137 QPFPFARRLLQISPPPSQPSPPSPMEEVPIDFPFFFAPPPQNIGASPPTETQ--VIPNPS 194
Query: 249 PKQRATTLCGGAPPARTRAGLSPKHQAAEDVSKHQSASRPAWLLTLEIVTGTMVGVLFLV 308
P PPA+ +P Q +E H + + + I+ G +VGVL ++
Sbjct: 195 PVP--------PPPAQPPPAQTPPPQLSE--VPHAVNKKKSHKSKMYIIVGVLVGVLGVM 244
Query: 309 AGFTGLQRCXXXXXXXXXXXXXXXEKDHIYIDSEILKDVVRFSRQELEVACEDFSNIIGS 368
A + + V + ELE ACEDFSNIIGS
Sbjct: 245 AALVAFFFLWNQKVKLIKPWGETGSSGQL--QDVVTTGVPKLKLAELETACEDFSNIIGS 302
Query: 369 -SPDSLVYKGTMKGGPEIAVISLCIKE-EHWTGYLELYFQREVADLARINHENTGKLLGY 426
S D+ +YKGT+ G EIAV+++ + W+ E FQ + L+++NH+N ++GY
Sbjct: 303 TSSDATIYKGTLSTGSEIAVLAVASGSLQDWSEDHETQFQEK--RLSQVNHKNFLNVIGY 360
Query: 427 CRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGP-P 485
C E PF RMLVF+YA NG+L+EHLH + + W R++IV+GIA ++++H L P P
Sbjct: 361 CHEDEPFNRMLVFEYAPNGSLFEHLHDQDAEHLDWPMRLRIVMGIAYCMEHMHN-LNPKP 419
Query: 486 FTISELNSSAVYLTEDFSPKVS 507
+ + LNSS+VYL D++ KVS
Sbjct: 420 ISHTNLNSSSVYLATDYAAKVS 441
|
|
| TAIR|locus:2078436 AT3G56050 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 96/259 (37%), Positives = 146/259 (56%)
Query: 260 APPARTRAGLSP-KHQAAEDVSKHQSASRPAWLLTLEIVTGTMVGVLFLVAGFTGLQ--R 316
+PPA+ + P H + S+S+ + T+ IV G + G +F++ TG+ +
Sbjct: 112 SPPAQHVSAPPPFVHHVT--LPSLTSSSKTSSNSTIPIVAGCIAGAVFILLLATGVFFFK 169
Query: 317 CXXXXXXXXXXXXXXXEKDHIYIDSEILKDVVRFSRQELEVACEDFSNIIGSSPDSLVYK 376
+ ++I V + R E+E ACEDFSN+IGS P ++K
Sbjct: 170 SKAGKSVNPWRTGLSGQLQKVFITG-----VPKLKRSEIEAACEDFSNVIGSCPIGTLFK 224
Query: 377 GTMKGGPEIAVISLCIKE-EHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435
GT+ G EIAV S+ + WT +E+ F++++ L++INH+N LLGYC E PFTR
Sbjct: 225 GTLSSGVEIAVASVATASAKEWTNNIEMQFRKKIEMLSKINHKNFVNLLGYCEEEEPFTR 284
Query: 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSA 495
+LVF+YASNGT++EHLHY E + W R++I +GIA L ++H L PP S L SS+
Sbjct: 285 ILVFEYASNGTVFEHLHYKESEHLDWVMRLRIAMGIAYCLDHMHG-LKPPIVHSNLLSSS 343
Query: 496 VYLTEDFSPKVSPLCLSFL 514
V LTED++ K++ +L
Sbjct: 344 VQLTEDYAVKIADFNFGYL 362
|
|
| TAIR|locus:2063146 AT2G40270 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 102/279 (36%), Positives = 148/279 (53%)
Query: 247 KDPKQR---ATTLCGGAP-PA----RTRAGL--SP-KHQAAEDVSKHQSA---SRPAWL- 291
KD K R ATT +P PA T+A P K + +DVS SA + P
Sbjct: 73 KDRKNRVVAATTTPSSSPEPAPKHVSTKASTVSEPQKRSSTQDVSPSPSAPLANSPIPRN 132
Query: 292 --LTLEIVTGTMVGVLFLVAGFTGLQRCXXXXXXXXXXXXXXXEKDHIYIDSEILKDVVR 349
++ +V G + G FL+ TGL + + +
Sbjct: 133 SHSSVPLVVGCVGGAFFLLLVATGLYFFTSKAGKTVNPWRTGLSGQ---LQKVFVTGIPV 189
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKE-EHWTGYLELYFQRE 408
R E+E ACEDFSN+IGS P ++KGT+ G EIAV S + W E++F+++
Sbjct: 190 LKRSEIEAACEDFSNVIGSCPIGKLFKGTLSSGVEIAVASFATTTAKDWKDSTEIHFRKK 249
Query: 409 VADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIV 468
+ L++INH+N LLGYC E PFTR+L+F+YA NG+L+EHLHY E + W R++I
Sbjct: 250 IEMLSKINHKNFANLLGYCEEKEPFTRILIFEYAPNGSLFEHLHYKESEHLDWGMRLRIA 309
Query: 469 IGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVS 507
+G+A L ++H +L PP + L SS++ LTED++ KVS
Sbjct: 310 MGLAYCLDHMH-QLNPPIAHTNLVSSSLQLTEDYAVKVS 347
|
|
| TAIR|locus:2171233 AT5G58540 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 78/179 (43%), Positives = 117/179 (65%)
Query: 342 EILKDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCI-KEEHWTGY 400
+++ DV R EL+ ACEDFSN+IGS D +YKGT+ G EIAV+S+ W+
Sbjct: 184 DLITDVPRLQLSELQAACEDFSNVIGSFSDGTIYKGTLSTGAEIAVVSIVAGSRSDWSTT 243
Query: 401 LELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVS 460
++ +++ +L++++H+N ++GYC E PF RMLVF+YA NG+L EHLH +
Sbjct: 244 MDTQLLQKMHNLSKVDHKNFLNVIGYCLEEEPFKRMLVFEYAPNGSLSEHLHSQYVEHLD 303
Query: 461 WTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSSI 519
W R++IV+GIA L+++H L PP +S L+SS+VYLTED + KVS F +++SI
Sbjct: 304 WPTRLRIVMGIAYCLEHMHN-LNPPILLSNLDSSSVYLTEDNAAKVS----DFSVINSI 357
|
|
| TAIR|locus:2013021 SERK1 "somatic embryogenesis receptor-like kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 232 (86.7 bits), Expect = 5.8e-36, Sum P(2) = 5.8e-36
Identities = 65/181 (35%), Positives = 94/181 (51%)
Query: 340 DSEI-LKDVVRFSRQELEVACEDFSN--IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEH 396
D E+ L + RFS +EL+VA + FSN I+G VYKG + G +AV L KEE
Sbjct: 279 DPEVHLGQLKRFSLRELQVASDGFSNKNILGRGGFGKVYKGRLADGTLVAVKRL--KEER 336
Query: 397 WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGER 456
G EL FQ EV ++ H N +L G+C +P R+LV+ Y +NG++ L
Sbjct: 337 TPGG-ELQFQTEVEMISMAVHRNLLRLRGFCM--TPTERLLVYPYMANGSVASCLRERPP 393
Query: 457 CQ--VSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514
Q + W R +I +G ARGL YLH P ++ ++ + L E+F V L+ L
Sbjct: 394 SQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 453
Query: 515 L 515
+
Sbjct: 454 M 454
|
|
| TAIR|locus:2206179 FEI1 "FEI 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 250 (93.1 bits), Expect = 7.5e-36, Sum P(2) = 7.5e-36
Identities = 55/177 (31%), Positives = 86/177 (48%)
Query: 31 ALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGFLAPEL 90
AL +F+ A+ + W D DPC+W G+ C RV+ +N++ + G L P++
Sbjct: 36 ALLSFRNAVTRSDSFI-HQWRPEDPDPCNWNGVTCDAKTKRVITLNLTYHKIMGPLPPDI 94
Query: 91 GLLTYLQEXXXXXXXXXXXXPXXXXXXXXXXXXXXGTNQLTGPIPPEIGNLTGLVKINLQ 150
G L +L+ P +N TGPIP E+G+L GL K+++
Sbjct: 95 GKLDHLRLLMLHNNALYGAIPTALGNCTALEEIHLQSNYFTGPIPAEMGDLPGLQKLDMS 154
Query: 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA-GSNSGYTANIHGMYASSANLTG 206
SN L+G +PA LG L L ++ N L G +P+ G SG++ N + + NL G
Sbjct: 155 SNTLSGPIPASLGQLKKLSNFNVSNNFLVGQIPSDGVLSGFSKN---SFIGNLNLCG 208
|
|
| TAIR|locus:2026097 SERK2 "somatic embryogenesis receptor-like kinase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 234 (87.4 bits), Expect = 4.9e-35, Sum P(2) = 4.9e-35
Identities = 65/181 (35%), Positives = 96/181 (53%)
Query: 340 DSEI-LKDVVRFSRQELEVACEDFSN--IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEH 396
D E+ L + RFS +EL+VA + FSN I+G VYKG + G +AV L KEE
Sbjct: 282 DPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGTLVAVKRL--KEER 339
Query: 397 WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGER 456
G EL FQ EV ++ H N +L G+C +P R+LV+ Y +NG++ L
Sbjct: 340 TPGG-ELQFQTEVEMISMAVHRNLLRLRGFCM--TPTERLLVYPYMANGSVASCLRERPP 396
Query: 457 CQV--SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514
Q+ +W+ R +I +G ARGL YLH P ++ ++ + L E+F V L+ L
Sbjct: 397 SQLPLAWSIRQQIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLARL 456
Query: 515 L 515
+
Sbjct: 457 M 457
|
|
| TAIR|locus:2033000 AT1G25320 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 288 (106.4 bits), Expect = 2.8e-34, Sum P(2) = 2.8e-34
Identities = 85/268 (31%), Positives = 122/268 (45%)
Query: 3 SYSSLELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHWTG 62
S SL +F+L NA +E +AL T K++I +DP LSNWN+ + +PC W G
Sbjct: 2 SVGSLLFMFLLIWNFNGELNAL-NDEGFALLTLKQSISKDPDGSLSNWNSENQNPCSWNG 60
Query: 63 IACSDARDRVLKINISGSSLKGFLAPELGLLTYLQEXXXXXXXXXXXXPXXXXXXXXXXX 122
+ C D + V+ ++I L G+L LGLL+ L+ P
Sbjct: 61 VTCDDNKV-VVSLSIPKKKLLGYLPSSLGLLSNLRHLNLRSNELSGNLPVELFKAQGLQS 119
Query: 123 XXXGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAV 182
N L+G IP EIG+L L ++L N L G +P + L L +N L G+V
Sbjct: 120 LVLYGNFLSGSIPNEIGDLKFLQILDLSRNSLNGSIPESVLKCNRLRSFDLSQNNLTGSV 179
Query: 183 PAGSNSGYTANIHGMYASSANLTGLC-----HLSQLK-VADFSYNFFVGSIPKCLEYLPS 236
P+G A++ + SS NL GL +L++L+ D S+N F GSIP L LP
Sbjct: 180 PSGFGQSL-ASLQKLDLSSNNLIGLVPDDLGNLTRLQGTLDLSHNSFSGSIPASLGNLPE 238
Query: 237 TSFQGNCLQN-KDPKQRATTLCGGAPPA 263
+ N P + L P A
Sbjct: 239 KVYVNLAYNNLSGPIPQTGALVNRGPTA 266
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| C0LGH8 | Y1634_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.6901 | 0.9635 | 0.7560 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 521 | |||
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 4e-25 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 8e-23 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 5e-21 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-18 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-18 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 5e-14 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-13 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 3e-13 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-12 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-10 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 1e-10 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 1e-10 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 2e-10 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 3e-10 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 3e-09 | |
| pfam08263 | 42 | pfam08263, LRRNT_2, Leucine rich repeat N-terminal | 6e-09 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 2e-08 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 1e-07 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 3e-07 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 5e-07 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 7e-07 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 8e-07 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-06 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 2e-06 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 1e-05 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 1e-05 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 3e-05 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 7e-05 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 8e-05 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 1e-04 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 3e-04 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 4e-04 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 5e-04 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 5e-04 | |
| cd00116 | 319 | cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribo | 5e-04 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 7e-04 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 0.001 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 0.001 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 0.001 | |
| cd05051 | 296 | cd05051, PTKc_DDR, Catalytic domain of the Protein | 0.002 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 0.003 | |
| cd05042 | 269 | cd05042, PTKc_Aatyk, Catalytic domain of the Prote | 0.004 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 4e-25
Identities = 86/289 (29%), Positives = 124/289 (42%), Gaps = 60/289 (20%)
Query: 17 LFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKIN 76
LF + E L +FK +I DP LSNWN+ AD C W GI C+++ RV+ I+
Sbjct: 19 LFLNFSMLHAEELELLLSFKSSI-NDPLKYLSNWNS-SADVCLWQGITCNNS-SRVVSID 75
Query: 77 ISGSSLKGFLAPEL---------------------------------------------- 90
+SG ++ G ++ +
Sbjct: 76 LSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIP 135
Query: 91 -GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149
G + L+ L L N L G IP ++G LK+LDLG N L G IP + NLT L + L
Sbjct: 136 RGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTL 195
Query: 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG--- 206
SN L G++P ELG + SL+ ++L N L G +P G +++ + NLTG
Sbjct: 196 ASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIP--YEIGGLTSLNHLDLVYNNLTGPIP 253
Query: 207 --LCHLSQLKVADFSYNFFVGSIPKC---LEYLPSTSFQGNCLQNKDPK 250
L +L L+ N G IP L+ L S N L + P+
Sbjct: 254 SSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPE 302
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 102 bits (255), Expect = 8e-23
Identities = 111/428 (25%), Positives = 177/428 (41%), Gaps = 88/428 (20%)
Query: 96 LQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLT 155
L+ L L N G +P++LG L L L L N+L+G IP E+ + LV ++L N L+
Sbjct: 477 LENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLS 536
Query: 156 GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKV 215
G++PA + L +L L +N+L G +P NL + L Q+ +
Sbjct: 537 GQIPASFSEMPVLSQLDLSQNQLSGEIPK------------------NLGNVESLVQVNI 578
Query: 216 ADFSYNFFVGSIPKCLEYLP--STSFQGNCLQNKDPKQRATTLCGGAPPARTRAGLSPKH 273
S+N GS+P +L +++ GN LCGG T +GL P
Sbjct: 579 ---SHNHLHGSLPSTGAFLAINASAVAGN-----------IDLCGG----DTTSGLPP-- 618
Query: 274 QAAEDVSKHQSASRPAWLLTLEIVTGTMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASE 333
+ V K P+W + G + + + GF R ++ + K
Sbjct: 619 --CKRVRK-----TPSWWFYITCTLGAFLVLALVAFGFV-FIRGRNNLEL-----KRVEN 665
Query: 334 KDHI----YIDSEILKDV----VRFSRQELEVACEDFSNIIGSSPDSLVYKG-TMKGGPE 384
+D + DS++ K + + S +E N+I YKG ++K G
Sbjct: 666 EDGTWELQFFDSKVSKSITINDILSSLKE--------ENVISRGKKGASYKGKSIKNG-- 715
Query: 385 IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASN 444
+ +KE + + +AD+ ++ H N KL+G CR S L+ +Y
Sbjct: 716 ---MQFVVKEINDVNSIPSSE---IADMGKLQHPNIVKLIGLCR--SEKGAYLIHEYIEG 767
Query: 445 GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSP 504
L E L +SW RR KI IGIA+ L++LH P + L+ + + P
Sbjct: 768 KNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEP 822
Query: 505 KVSPLCLS 512
L LS
Sbjct: 823 H---LRLS 827
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 96.8 bits (241), Expect = 5e-21
Identities = 64/166 (38%), Positives = 91/166 (54%), Gaps = 7/166 (4%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+++ G+ L G + L LT L+ L L N L+G IP+ELG +K LK + LG N L+G I
Sbjct: 169 LDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEI 228
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANI 194
P EIG LT L ++L N LTG +P+ LGNL +L+ L L +N+L G +P S +
Sbjct: 229 PYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFS--LQKL 286
Query: 195 HGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCLEYLP 235
+ S +L+G + L L++ N F G IP L LP
Sbjct: 287 ISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLP 332
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 89.5 bits (222), Expect = 1e-18
Identities = 62/167 (37%), Positives = 86/167 (51%), Gaps = 8/167 (4%)
Query: 71 RVLK-INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQ 129
+ LK I + ++L G + E+G LT L L L NNL G IP LG LK L+ L L N+
Sbjct: 212 KSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNK 271
Query: 130 LTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSG 189
L+GPIPP I +L L+ ++L N L+G +P + L +LE LHL N G +P S
Sbjct: 272 LSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSL 331
Query: 190 YTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCL 231
+ ++ S +G L + L V D S N G IP+ L
Sbjct: 332 PRLQVLQLW--SNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGL 376
|
Length = 968 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 88.7 bits (220), Expect = 1e-18
Identities = 51/147 (34%), Positives = 72/147 (48%), Gaps = 15/147 (10%)
Query: 26 TNEFWALTTFKEAIYEDPHLVLSNWNALDADPC----H-WTGIAC---SDARDRVLK-IN 76
E AL T K ++ WN DPC H W+G C S + +
Sbjct: 371 LEEVSALQTLKSSLGLPLRF---GWNG---DPCVPQQHPWSGADCQFDSTKGKWFIDGLG 424
Query: 77 ISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPP 136
+ L+GF+ ++ L +LQ + L GN++ G IP LG + L++LDL N G IP
Sbjct: 425 LDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPE 484
Query: 137 EIGNLTGLVKINLQSNGLTGRLPAELG 163
+G LT L +NL N L+GR+PA LG
Sbjct: 485 SLGQLTSLRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 74.5 bits (183), Expect = 5e-14
Identities = 42/114 (36%), Positives = 66/114 (57%)
Query: 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQ 129
R+ +++S + G + +LG L+ L +L L N L G IP EL K+L LDL NQ
Sbjct: 475 KRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQ 534
Query: 130 LTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183
L+G IP + L +++L N L+G +P LGN+ SL ++++ N L G++P
Sbjct: 535 LSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP 588
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 73.7 bits (181), Expect = 1e-13
Identities = 50/143 (34%), Positives = 67/143 (46%), Gaps = 11/143 (7%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L LQ L L N G IPK LG L +LDL TN LTG IP + + L K+ L SN
Sbjct: 331 LPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSN 390
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTA--NIHGMYASSANLTG---- 206
L G +P LG SL + L N G +P S +T ++ + S+ NL G
Sbjct: 391 SLEGEIPKSLGACRSLRRVRLQDNSFSGELP----SEFTKLPLVYFLDISNNNLQGRINS 446
Query: 207 -LCHLSQLKVADFSYNFFVGSIP 228
+ L++ + N F G +P
Sbjct: 447 RKWDMPSLQMLSLARNKFFGGLP 469
|
Length = 968 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 68.4 bits (168), Expect = 3e-13
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 5/114 (4%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
+G VY K + I IK+E + LE RE+ L ++NH N KL G
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIK-IIKKEDSSSLLE-ELLREIEILKKLNHPNIVKLYG 58
Query: 426 YCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+ + LV +Y G+L + L E +S ++I++ I GL+YLH
Sbjct: 59 VFEDENHL--YLVMEYCEGGSLKDLLKENEGK-LSEDEILRILLQILEGLEYLH 109
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 69.9 bits (171), Expect = 2e-12
Identities = 44/116 (37%), Positives = 68/116 (58%), Gaps = 6/116 (5%)
Query: 71 RVLKINISGSSLKGFLAPELGLLTYLQEL-ILH--GNNLIGIIPKELGLLKRLKILDLGT 127
+++ +++S +SL G + PEL + LQ L ILH NN G IP L L RL++L L +
Sbjct: 285 KLISLDLSDNSLSGEI-PEL--VIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWS 341
Query: 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183
N+ +G IP +G L ++L +N LTG +P L + +L +L L N L+G +P
Sbjct: 342 NKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIP 397
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 64.1 bits (156), Expect = 1e-10
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 22/161 (13%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+++S ++L G + L L +LIL N+L G IPK LG + L+ + L N +G +
Sbjct: 361 LDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGEL 420
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANI 194
P E L + +++ +N L GR+ + ++ SL+ L L RN+ G +P S
Sbjct: 421 PSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGS------ 474
Query: 195 HGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLP 235
+L+ D S N F G++P+ L L
Sbjct: 475 ----------------KRLENLDLSRNQFSGAVPRKLGSLS 499
|
Length = 968 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 61.8 bits (151), Expect = 1e-10
Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Query: 374 VYKGTMKGGP-----EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCR 428
VYKG +KG E+AV +L KE+ +E F RE + +++H N KLLG C
Sbjct: 15 VYKGKLKGKGGKKKVEVAVKTL--KEDASEQQIEE-FLREARIMRKLDHPNVVKLLGVCT 71
Query: 429 ESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
E P +V +Y G L +L R ++S + + + IARG++YL
Sbjct: 72 EEEPL--YIVMEYMEGGDLLSYLRK-NRPKLSLSDLLSFALQIARGMEYLE 119
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 61.8 bits (151), Expect = 1e-10
Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 10/111 (9%)
Query: 374 VYKGTMKGGP-----EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCR 428
VYKGT+KG E+AV +L KE+ +E F RE + +++H N KLLG C
Sbjct: 15 VYKGTLKGKGDGKEVEVAVKTL--KEDASEQQIEE-FLREARIMRKLDHPNIVKLLGVCT 71
Query: 429 ESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
E P M+V +Y G L ++L ++S + + + IARG++YL
Sbjct: 72 EEEPL--MIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLE 120
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 61.0 bits (149), Expect = 2e-10
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 17/114 (14%)
Query: 374 VYKGTMKGGPEIAVISLCIK-------EEHWTGYLELYFQREVADLARINHENTGKLLGY 426
VYKGT+KG E + +K EE F E + + +++H N +LLG
Sbjct: 15 VYKGTLKGDGEGTETKVAVKTLKEGASEEEREE-----FLEEASIMKKLSHPNIVRLLGV 69
Query: 427 CRESSPFTRMLVFDYASNGTLYEHLH-YGERCQVSWTRRMKIVIGIARGLKYLH 479
C + P +V +Y G L + L +GE+ + +++ + IA+G++YL
Sbjct: 70 CTQGEPL--YIVTEYMPGGDLLDFLRKHGEKLTLKD--LLQMALQIAKGMEYLE 119
|
Length = 258 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 62.6 bits (152), Expect = 3e-10
Identities = 51/150 (34%), Positives = 66/150 (44%), Gaps = 21/150 (14%)
Query: 82 LKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNL 141
L G + P + L L L L N+L G IP+ + L+ L+IL L +N TG IP + +L
Sbjct: 272 LSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSL 331
Query: 142 TGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASS 201
L + L SN +G +P LG +L L L N L G +P G SS
Sbjct: 332 PRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEG------------LCSS 379
Query: 202 ANLTGLCHLSQLKVADFSYNFFVGSIPKCL 231
NL L S N G IPK L
Sbjct: 380 GNLFKLILFS---------NSLEGEIPKSL 400
|
Length = 968 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 57.5 bits (140), Expect = 3e-09
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 16/117 (13%)
Query: 374 VYKGTMKGGP----EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRE 429
VYKG +KG E+AV +L KE+ + F +E + ++ H N +LLG C E
Sbjct: 11 VYKGKLKGKDGKTTEVAVKTL--KEDASEEERKD-FLKEARVMKKLGHPNVVRLLGVCTE 67
Query: 430 SSPFTRMLVFDYASNGTLYEHL-------HYGERCQVSWTRRMKIVIGIARGLKYLH 479
P LV +Y G L ++L E+ +S + I IA+G++YL
Sbjct: 68 EEPL--YLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA 122
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|219766 pfam08263, LRRNT_2, Leucine rich repeat N-terminal domain | Back alignment and domain information |
|---|
Score = 51.2 bits (123), Expect = 6e-09
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 31 ALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACS 66
AL FK ++ DP LS+WN +DPC WTG+ C
Sbjct: 7 ALLAFKSSLNGDPSGALSSWNPSSSDPCSWTGVTCD 42
|
Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats. Length = 42 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 56.1 bits (135), Expect = 2e-08
Identities = 36/88 (40%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLK-RLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151
LT L L L NN I IP +GLLK LK LDL N++ +P + NL L ++L
Sbjct: 115 LTNLTSLDL-DNNNITDIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSF 172
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQ 179
N L+ LP L NL +L L L N++
Sbjct: 173 NDLS-DLPKLLSNLSNLNNLDLSGNKIS 199
|
Length = 394 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 52.6 bits (127), Expect = 1e-07
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 7/116 (6%)
Query: 365 IIGSSPDSLVYKGTMKGGPEI-AVISLCIKEEHWTGYLELYFQREVADLARINHENTGKL 423
+GS VYK KG +I AV L + E + +RE+ L R++H N +L
Sbjct: 6 KLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSK--KDQTARREIRILRRLSHPNIVRL 63
Query: 424 LGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+ + LV +Y G L+++L +S KI + I RGL+YLH
Sbjct: 64 IDAFEDKD--HLYLVMEYCEGGDLFDYLS--RGGPLSEDEAKKIALQILRGLEYLH 115
|
Length = 260 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 51.6 bits (124), Expect = 3e-07
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 12/129 (9%)
Query: 355 LEVACEDFSNIIGSSPDSLVYKGTMK--GGPEIAVISLCIKEEHWTGYLE---LYFQREV 409
++ + +IG V +G +K G EI V IK G + L F E
Sbjct: 1 IDPSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDV---AIKTLK-AGSSDKQRLDFLTEA 56
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
+ + + +H N +L G +S P M++ +Y NG+L + L + + + + + ++
Sbjct: 57 SIMGQFDHPNIIRLEGVVTKSRPV--MIITEYMENGSLDKFLRENDG-KFTVGQLVGMLR 113
Query: 470 GIARGLKYL 478
GIA G+KYL
Sbjct: 114 GIASGMKYL 122
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 5e-07
Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 86 LAPELGLLTY-LQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGL 144
+ P +GLL L+EL L N I +P L L LK LDL N L+ +P + NL+ L
Sbjct: 131 IPPLIGLLKSNLKELDLSDNK-IESLPSPLRNLPNLKNLDLSFNDLSD-LPKLLSNLSNL 188
Query: 145 VKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
++L N ++ LP E+ L +LEEL L N +
Sbjct: 189 NNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII 222
|
Length = 394 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 50.5 bits (121), Expect = 7e-07
Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 23/153 (15%)
Query: 374 VYKGTMKGGPE------IAVISL-CIKEEHWTGYLELYFQREVADLARINHENTGKLLGY 426
V+ KG E + V +L K+E+ L+ F+RE+ +++H+N +LLG
Sbjct: 21 VFLAKAKGIEEEGGETLVLVKALQKTKDEN----LQSEFRRELDMFRKLSHKNVVRLLGL 76
Query: 427 CRESSPFTRMLVFDYASNGTLYEHL-------HYGERCQVSWTRRMKIVIGIARGLKYLH 479
CRE+ P ++ +Y G L + L + +S +++ + IA G+ +L
Sbjct: 77 CREAEPH--YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS 134
Query: 480 TELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512
F +L + ++ KVS L LS
Sbjct: 135 NA---RFVHRDLAARNCLVSSQREVKVSLLSLS 164
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 50.2 bits (121), Expect = 8e-07
Identities = 26/106 (24%), Positives = 40/106 (37%), Gaps = 6/106 (5%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
VY K ++ I IK++ E RE+ L ++ H N +L +
Sbjct: 15 VYLARDKKTGKLVAIK-VIKKKKIKKDRE-RILREIKILKKLKHPNIVRLYDVFEDEDKL 72
Query: 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
LV +Y G L++ L R R + I L+YLH
Sbjct: 73 Y--LVMEYCEGGDLFDLLKKRGRLSEDEAR--FYLRQILSALEYLH 114
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 2e-06
Identities = 52/198 (26%), Positives = 77/198 (38%), Gaps = 47/198 (23%)
Query: 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG 206
+ L + GL G +P ++ L L+ ++L N ++G +P S ++T
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPP---------------SLGSITS 467
Query: 207 LCHLSQLKVADFSYNFFVGSIPKCLEYLPS---TSFQGNCLQNKDPKQRATTLCGGAPPA 263
L +V D SYN F GSIP+ L L S + GN L + P GG
Sbjct: 468 L------EVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAA-----LGGRLLH 516
Query: 264 RTR------AGLS--PKHQAAEDVSKHQSASRPAWLLTLEIVTGTMVGVLFLVAGFTGLQ 315
R AGL P +A H S + I G V LFLV +
Sbjct: 517 RASFNFTDNAGLCGIPGLRAC---GPHLSVG-----AKIGIAFGVSVAFLFLVIC--AMC 566
Query: 316 RCKSKPSIIIPWKKSASE 333
K + +I+ + +A E
Sbjct: 567 WWKRRQNILRAQRIAARE 584
|
Length = 623 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 2e-06
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 14/86 (16%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHY----------- 453
F+RE L HEN K G C E P ++VF+Y +G L + L
Sbjct: 55 FEREAELLTNFQHENIVKFYGVCTEGDPP--IMVFEYMEHGDLNKFLRSHGPDAAFLKSP 112
Query: 454 -GERCQVSWTRRMKIVIGIARGLKYL 478
+++ ++ ++I + IA G+ YL
Sbjct: 113 DSPMGELTLSQLLQIAVQIASGMVYL 138
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 1e-05
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 86 LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLV 145
L PE+ LL+ L+EL L N++I + L LK L L+L N+L IGNL+ L
Sbjct: 201 LPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLEDLPES-IGNLSNLE 258
Query: 146 KINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA 184
++L +N ++ + + LG+L +L EL L N L A+P
Sbjct: 259 TLDLSNNQIS-SISS-LGSLTNLRELDLSGNSLSNALPL 295
|
Length = 394 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 46.7 bits (111), Expect = 1e-05
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 19/122 (15%)
Query: 374 VYKGTMKG-GPEIAVISLCIK--EEHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430
VYKG + G ++ S+ IK +E+ ++ F++E ++ + H N LLG C +
Sbjct: 21 VYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKE 80
Query: 431 SPFTRMLVFDYASNGTLYEHL-----HYGERCQVSWTRRMK---------IVIGIARGLK 476
P T ML F+Y ++G L+E L H + I I IA G++
Sbjct: 81 QP-TCML-FEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGME 138
Query: 477 YL 478
YL
Sbjct: 139 YL 140
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 3e-05
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
VYKG +KG E+AV + C L+ F +E L + +H N KL+G C + P
Sbjct: 11 VYKGVLKGNTEVAVKT-C--RSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPI 67
Query: 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
+V + G+L L ++ +++ + +++ + A G++YL
Sbjct: 68 --YIVMELVPGGSLLTFLR-KKKNRLTVKKLLQMSLDAAAGMEYL 109
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 40.2 bits (95), Expect = 7e-05
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 96 LQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPE-IGNLTGLVKINLQSNGL 154
L+ L L N L I L LK+LDL N LT I PE L L ++L N L
Sbjct: 2 LKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTS-ISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 44.4 bits (105), Expect = 8e-05
Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 22/94 (23%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHY----------- 453
FQRE A +A +H N KLLG C P L+F+Y + G L E L +
Sbjct: 55 FQREAALMAEFDHPNIVKLLGVCAVGKPMC--LLFEYMAYGDLNEFLRHRSPRAQCSLSH 112
Query: 454 ---------GERCQVSWTRRMKIVIGIARGLKYL 478
+S T ++ I +A G+ YL
Sbjct: 113 STSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYL 146
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 39.8 bits (94), Expect = 1e-04
Identities = 24/61 (39%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 119 RLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNR 177
LK LDL N+LT IP L L ++L N LT P L SL L L N
Sbjct: 1 NLKSLDLSNNRLTV-IPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNN 59
Query: 178 L 178
L
Sbjct: 60 L 60
|
Length = 60 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 3e-04
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 10/105 (9%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL--HYGERCQVSWT 462
F E L + +H N +L G + T M+V +Y SNG L L H G Q+
Sbjct: 53 FLAEALTLGQFDHSNIVRLEGVITRGN--TMMIVTEYMSNGALDSFLRKHEG---QLVAG 107
Query: 463 RRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVS 507
+ M ++ G+A G+KYL +E+G + L + V + D K+S
Sbjct: 108 QLMGMLPGLASGMKYL-SEMG--YVHKGLAAHKVLVNSDLVCKIS 149
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 4e-04
Identities = 46/187 (24%), Positives = 76/187 (40%), Gaps = 32/187 (17%)
Query: 354 ELEVACEDFSNIIGSSPDSLVYKG-----TMKGGPEIAVISL--CIKEEHWTGYLELYFQ 406
EL ++ F +G +YKG M +A+ +L + W FQ
Sbjct: 1 ELPLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGE-----FQ 55
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL-----HYGERCQVSW 461
+E + +A ++H N LLG + P ++F+Y + G L+E L H C
Sbjct: 56 QEASLMAELHHPNIVCLLGVVTQEQPVC--MLFEYLNQGDLHEFLIMRSPHSDVGCSSDE 113
Query: 462 TRRMK----------IVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCL 511
+K I I IA G++YL + F +L + + + E K+S L L
Sbjct: 114 DGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQLHVKISDLGL 170
Query: 512 SFLLVSS 518
S + S+
Sbjct: 171 SREIYSA 177
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 5e-04
Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 6/116 (5%)
Query: 366 IGSSPDSLVYKGTMK--GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKL 423
+G +V +G GG I V C+K + + ++ F +E A + ++HEN +L
Sbjct: 3 LGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMD-DFLKEAAIMHSLDHENLIRL 61
Query: 424 LGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
G M+V + A G+L + L + + IA G++YL
Sbjct: 62 YGVVLTHP---LMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLE 114
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 5e-04
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F+RE+ L ++HEN K G C + + L+ +Y +G+L ++L R Q++ R
Sbjct: 53 FEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQ-RHRDQINLKRL 111
Query: 465 MKIVIGIARGLKYLHT 480
+ I +G+ YL +
Sbjct: 112 LLFSSQICKGMDYLGS 127
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|238064 cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 5e-04
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 12/95 (12%)
Query: 96 LQELILHGNNLIGI----IPKELGLLKRLKILDLGTNQLTGP----IPPEIGNLTGLVKI 147
L++L+L N L G + K L + LK L+L N + + + L +
Sbjct: 139 LEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVL 198
Query: 148 NLQSNGLT----GRLPAELGNLISLEELHLDRNRL 178
+L +NGLT L L +L SLE L+L N L
Sbjct: 199 DLNNNGLTDEGASALAETLASLKSLEVLNLGDNNL 233
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). Length = 319 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 7e-04
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
IG V G +G ++AV C+K++ F E + + + H N
Sbjct: 9 KLGATIGKGEFGDVMLGDYRG-QKVAV--KCLKDD---STAAQAFLAEASVMTTLRHPNL 62
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
+LLG + +P +V +Y + G+L ++L R ++ +++ + + G++YL
Sbjct: 63 VQLLGVVLQGNPL--YIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEE 120
Query: 481 ELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512
+ F +L + V ++ED KVS L+
Sbjct: 121 K---NFVHRDLAARNVLVSEDLVAKVSDFGLA 149
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 40.7 bits (95), Expect = 0.001
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 90 LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLT-GLVKIN 148
L L L L L+ N L I + L L L LDL N +T IPP IG L L +++
Sbjct: 89 LLNLLPLPSLDLNLNRLRSNISELLEL-TNLTSLDLDNNNIT-DIPPLIGLLKSNLKELD 146
Query: 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNS 188
L N + LP+ L NL +L+ L L N L SN
Sbjct: 147 LSDNKIE-SLPSPLRNLPNLKNLDLSFNDLSDLPKLLSNL 185
|
Length = 394 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.001
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 10/118 (8%)
Query: 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYL-ELYFQREVADLARINHENT 420
IGS LV+ G ++A+ + I+E G + E F E + +++H
Sbjct: 8 LVQEIGSGQFGLVWLGYWLEKRKVAIKT--IRE----GAMSEEDFIEEAQVMMKLSHPKL 61
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
+L G C E SP LVF++ +G L ++L +R + S + + + + G+ YL
Sbjct: 62 VQLYGVCTERSPIC--LVFEFMEHGCLSDYLR-AQRGKFSQETLLGMCLDVCEGMAYL 116
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.001
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 374 VYKGTMKG-GPEIAVISLCIKEEHWTGYLELY-FQREVADLARINHENTGKLLGYCRESS 431
VY+G K +AV +L KE+ +E+ F +E A + I H N +LLG C
Sbjct: 22 VYEGVWKKYSLTVAVKTL--KEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 75
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
PF ++ ++ + G L ++L R +V+ + + I+ ++YL
Sbjct: 76 PF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 120
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.002
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 11/83 (13%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE--------- 455
F +EV L+R++ N +LLG C P ++ +Y NG L + L
Sbjct: 66 FLKEVKILSRLSDPNIARLLGVCTVDPPL--CMIMEYMENGDLNQFLQKHVAETSGLACN 123
Query: 456 RCQVSWTRRMKIVIGIARGLKYL 478
+S++ + + IA G++YL
Sbjct: 124 SKSLSFSTLLYMATQIASGMRYL 146
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 0.003
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 374 VYKGT--MKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431
V KG MK G E+ V +K+EH + F RE + +A+++H +L+G C +
Sbjct: 11 VVKGVYLMKSGKEVEVAVKTLKQEHIAA-GKKEFLREASVMAQLDHPCIVRLIGVC-KGE 68
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
P MLV + A G L ++L VS + + +A G+ YL
Sbjct: 69 PL--MLVMELAPLGPLLKYLKKRREIPVSDLKEL--AHQVAMGMAYL 111
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Score = 38.7 bits (90), Expect = 0.004
Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 12/117 (10%)
Query: 402 ELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL-----HYGER 456
+L F +EV +NH N + LG C ES P+ +LV ++ G L +L +
Sbjct: 39 QLLFLQEVQPYRELNHPNVLQCLGQCIESIPY--LLVLEFCPLGDLKNYLRSNRGMVAQM 96
Query: 457 CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSF 513
Q +RM +A GL +LH F S+L LT D S K+ L+
Sbjct: 97 AQKDVLQRM--ACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLAL 148
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 521 | |||
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 99.97 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 99.97 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 99.97 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 99.96 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 99.96 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 99.96 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 99.95 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 99.95 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 99.95 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 99.95 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 99.95 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 99.95 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 99.94 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 99.94 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 99.94 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 99.94 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 99.94 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.94 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 99.94 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 99.94 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 99.94 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 99.93 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 99.93 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 99.93 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 99.93 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 99.93 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 99.93 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 99.93 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 99.93 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 99.92 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 99.92 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 99.92 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 99.92 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 99.92 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 99.92 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 99.92 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 99.92 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 99.92 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 99.92 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 99.92 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 99.91 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.91 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 99.91 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 99.91 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 99.91 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 99.91 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 99.91 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.91 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 99.91 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 99.91 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 99.91 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 99.91 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 99.91 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 99.91 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 99.91 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.91 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 99.91 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.91 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.91 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 99.91 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 99.91 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 99.91 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.91 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.91 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 99.91 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.9 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.9 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 99.9 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 99.9 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.9 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 99.9 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 99.9 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 99.9 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 99.9 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 99.9 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 99.9 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.9 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 99.9 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.9 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.9 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 99.9 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.9 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 99.9 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.9 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 99.9 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 99.9 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.9 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 99.9 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.9 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.9 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.9 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.9 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 99.9 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.9 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 99.9 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 99.9 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 99.9 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 99.9 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 99.9 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.9 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 99.9 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.9 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.9 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 99.9 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.9 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.9 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.9 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.9 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 99.9 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 99.89 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.89 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 99.89 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 99.89 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 99.89 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 99.89 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.89 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.89 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 99.89 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.89 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 99.89 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 99.89 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.89 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.89 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.89 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 99.89 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 99.89 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 99.89 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 99.89 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.89 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.89 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.89 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 99.89 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.89 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.89 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.89 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 99.89 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.89 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.89 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.89 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.89 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.89 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 99.89 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 99.89 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.89 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.89 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.89 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.89 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.89 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.89 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 99.89 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.89 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.89 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.89 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.89 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 99.89 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 99.89 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.89 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 99.88 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.88 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 99.88 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.88 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 99.88 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.88 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.88 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.88 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.88 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.88 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.88 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.88 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.88 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.88 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.88 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.88 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 99.88 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.88 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.88 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 99.88 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 99.88 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.88 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 99.88 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 99.88 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 99.88 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.88 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.88 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.88 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.88 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.88 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.88 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.88 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.88 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.88 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 99.88 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 99.88 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.88 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 99.88 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.88 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.88 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.88 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.88 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.88 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.88 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.88 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.88 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.87 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.87 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.87 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 99.87 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.87 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.87 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.87 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.87 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.87 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 99.87 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.87 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.87 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.87 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.87 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.87 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.87 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.87 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.87 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.87 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.87 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.87 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.87 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 99.87 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.87 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.87 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.87 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 99.87 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.87 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.87 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.87 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.87 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 99.87 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.87 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.87 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.87 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.87 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.87 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.87 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.87 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 99.87 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.86 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.86 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.86 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.86 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.86 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 99.86 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 99.86 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.86 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.86 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.86 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.86 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.86 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.86 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.86 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.86 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.86 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 99.86 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.86 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.86 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.86 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.86 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.86 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 99.86 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 99.86 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.86 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.86 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.86 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.86 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.86 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.86 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.86 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.86 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.86 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.86 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.86 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.86 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.86 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.86 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.86 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.86 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 99.86 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.86 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.85 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.85 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.85 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.85 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.85 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.85 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.85 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.85 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.85 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.85 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.85 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.85 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.85 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.85 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 99.85 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.85 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.85 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.85 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 99.85 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.85 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.85 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 99.85 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.85 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.85 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.84 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.84 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.84 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.84 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.84 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.84 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.84 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.84 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.84 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.84 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.84 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.84 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.84 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.84 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.84 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.84 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.84 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.84 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.83 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 99.83 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.83 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.83 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.83 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.83 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.83 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.83 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.83 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.83 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.83 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.83 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.83 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.83 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.83 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.83 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.83 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.83 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.83 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.82 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.82 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.82 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.82 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.82 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.82 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.82 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.82 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.82 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.82 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.81 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.81 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.81 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.81 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.81 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.8 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.8 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.8 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.8 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.8 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.79 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.79 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.79 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.79 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.79 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.79 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.78 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.78 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.77 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.77 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.77 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.77 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.76 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.76 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.75 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.75 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.74 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.74 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.74 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.74 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.74 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.73 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.73 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.73 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.69 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.68 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.68 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.67 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.67 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.66 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.66 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.65 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.65 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.65 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.64 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.62 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 99.61 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.6 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 99.6 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.6 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.6 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.57 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.56 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.56 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.56 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.54 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.53 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.51 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.51 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.48 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.43 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 99.42 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.42 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.41 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.41 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 99.41 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.4 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.39 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.33 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.33 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.32 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 99.29 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.27 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 99.25 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.24 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.2 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.2 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.2 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.2 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 99.19 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.17 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.17 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.16 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.13 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.09 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.09 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 99.08 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.06 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.05 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.05 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 99.02 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 99.01 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.01 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 98.99 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.95 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.95 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.94 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 98.93 | |
| PF08263 | 43 | LRRNT_2: Leucine rich repeat N-terminal domain; In | 98.89 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 98.85 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.78 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 98.76 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 98.73 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 98.69 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 98.62 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 98.59 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.58 | |
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 98.52 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 98.51 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 98.5 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 98.46 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 98.46 | |
| PF12260 | 188 | PIP49_C: Protein-kinase domain of FAM69; InterPro: | 98.43 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.37 | |
| KOG1235 | 538 | consensus Predicted unusual protein kinase [Genera | 98.35 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 98.33 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.32 | |
| TIGR02172 | 226 | Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou | 98.32 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.32 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 98.3 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.24 | |
| COG1718 | 268 | RIO1 Serine/threonine protein kinase involved in c | 98.24 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 98.2 | |
| PF12799 | 44 | LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_ | 98.2 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 98.19 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 98.14 | |
| PF12799 | 44 | LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_ | 98.11 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.1 |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-46 Score=428.70 Aligned_cols=406 Identities=26% Similarity=0.428 Sum_probs=251.8
Q ss_pred CEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCC---------
Q 009965 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNL--------- 141 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l--------- 141 (521)
+++.|++++|.+.+.+|..++.+++|+.|+|++|++++.+|..|..+++|++|+|++|++++.+|..+..+
T Consensus 381 ~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 460 (968)
T PLN00113 381 NLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLA 460 (968)
T ss_pred CCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECc
Confidence 45556666666655555555555555555555555555555555555555555555555555444444333
Q ss_pred --------------ccCceeecccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCc-
Q 009965 142 --------------TGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG- 206 (521)
Q Consensus 142 --------------~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~- 206 (521)
++|+.|+|++|++++.+|..|.++++|+.|+|++|+++|.+|..... ..++..+++++|.+++
T Consensus 461 ~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~--l~~L~~L~Ls~N~l~~~ 538 (968)
T PLN00113 461 RNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSS--CKKLVSLDLSHNQLSGQ 538 (968)
T ss_pred CceeeeecCcccccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcC--ccCCCEEECCCCccccc
Confidence 45666666666666777777777777777777777777777764322 2467778888888875
Q ss_pred ----ccCCCCCCEEeccCCccccCCccccc---cCCCcccCCCcCCCCCCccc------------ccccCCCCCCCCCCC
Q 009965 207 ----LCHLSQLKVADFSYNFFVGSIPKCLE---YLPSTSFQGNCLQNKDPKQR------------ATTLCGGAPPARTRA 267 (521)
Q Consensus 207 ----~~~l~~L~~L~ls~N~l~g~ip~~l~---~l~~l~~~~N~l~~~~~~~~------------~~~~c~~~~~~~~~~ 267 (521)
+..+++|+.|||++|+++|.+|..+. .|..+++++|.+.+..|... ....|++.++.
T Consensus 539 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~---- 614 (968)
T PLN00113 539 IPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTS---- 614 (968)
T ss_pred CChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCcccc----
Confidence 34578888999999999888887664 45667888888876544311 11234321100
Q ss_pred CCCCCCccccccccCCCCCCccceeeeeeeechhhHHHHHhhheeeEeeecCCCccccccCCCCCccCccccchhhhccc
Q 009965 268 GLSPKHQAAEDVSKHQSASRPAWLLTLEIVTGTMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDHIYIDSEILKDV 347 (521)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~iv~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (521)
+ .+.+ .... ....+.+++.++.++++++++++++++++++++..+ . ..... ...............
T Consensus 615 ~-----~~~c---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~---~~~~~~~~~~~~~~~ 680 (968)
T PLN00113 615 G-----LPPC---KRVR-KTPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLE-L-KRVEN---EDGTWELQFFDSKVS 680 (968)
T ss_pred C-----CCCC---cccc-ccceeeeehhHHHHHHHHHHHHHHHHHHHHhhhccc-c-ccccc---ccccccccccccccc
Confidence 0 0001 0011 111222221222222222222222222222222111 0 00000 000000000000011
Q ss_pred cccCHHHHHHHHhhhhchhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeE
Q 009965 348 VRFSRQELEVACEDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGY 426 (521)
Q Consensus 348 ~~~~~~~l~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~ 426 (521)
..++++++.... ...++||+|+||.||+|+.. ++..||||++..... ....|++.+++++|||||+++|+
T Consensus 681 ~~~~~~~~~~~~-~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~l~~l~HpnIv~~~~~ 751 (968)
T PLN00113 681 KSITINDILSSL-KEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS--------IPSSEIADMGKLQHPNIVKLIGL 751 (968)
T ss_pred hhhhHHHHHhhC-CcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc--------ccHHHHHHHhhCCCCCcceEEEE
Confidence 234555554432 12378999999999999985 789999998743211 12346888999999999999999
Q ss_pred EecCCCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeee
Q 009965 427 CRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKV 506 (521)
Q Consensus 427 ~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl 506 (521)
|.+.+ ..++||||+++|+|.++++ .++|.++.+|+.|+|+||+|||+.+.++|+|||+||+||++|+++.+++
T Consensus 752 ~~~~~--~~~lv~Ey~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~ 824 (968)
T PLN00113 752 CRSEK--GAYLIHEYIEGKNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHL 824 (968)
T ss_pred EEcCC--CCEEEEeCCCCCcHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEE
Confidence 98876 7899999999999999995 2899999999999999999999887889999999999999999998887
Q ss_pred CCCchhh
Q 009965 507 SPLCLSF 513 (521)
Q Consensus 507 ~DfGla~ 513 (521)
. ||.+.
T Consensus 825 ~-~~~~~ 830 (968)
T PLN00113 825 R-LSLPG 830 (968)
T ss_pred E-ecccc
Confidence 5 55544
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=327.93 Aligned_cols=166 Identities=40% Similarity=0.634 Sum_probs=149.1
Q ss_pred cccccCHHHHHHHHhhhh--chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccce
Q 009965 346 DVVRFSRQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKL 423 (521)
Q Consensus 346 ~~~~~~~~~l~~~~~~~~--~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l 423 (521)
....|++.|+..||++|+ ++||+|+||.||+|.+++|..||||++.....+ . .++|.+|++++.+++|||+|+|
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~---~-~~eF~~Ei~~ls~l~H~Nlv~L 136 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQ---G-EREFLNEVEILSRLRHPNLVKL 136 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCc---c-hhHHHHHHHHHhcCCCcCcccE
Confidence 356799999999999998 899999999999999999999999987443221 1 4569999999999999999999
Q ss_pred eeEEecCCCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCC
Q 009965 424 LGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503 (521)
Q Consensus 424 ~g~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~ 503 (521)
+|||.+.+. +.+||||||++|+|+++|+.....+++|.+|++||.++|+||+|||+.|.|+||||||||+|||||++++
T Consensus 137 lGyC~e~~~-~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~ 215 (361)
T KOG1187|consen 137 LGYCLEGGE-HRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFN 215 (361)
T ss_pred EEEEecCCc-eEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCC
Confidence 999998762 3899999999999999998654337999999999999999999999999999999999999999999999
Q ss_pred eeeCCCchhhhcc
Q 009965 504 PKVSPLCLSFLLV 516 (521)
Q Consensus 504 ~kl~DfGla~~~~ 516 (521)
|||+|||+|+...
T Consensus 216 aKlsDFGLa~~~~ 228 (361)
T KOG1187|consen 216 AKLSDFGLAKLGP 228 (361)
T ss_pred EEccCccCcccCC
Confidence 9999999997764
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-31 Score=255.20 Aligned_cols=146 Identities=22% Similarity=0.336 Sum_probs=130.3
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
..||+|+||+||+|+++ ++.+||||.+..+.. ..+..+....|+++|+.++|||||++++++++++ ..|||||||
T Consensus 16 ~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l--~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~--~i~lVMEyC 91 (429)
T KOG0595|consen 16 REIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL--NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDD--FIYLVMEYC 91 (429)
T ss_pred hhccCcceEEEEEeEeccCCceEEeeeehhhcc--CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCC--eEEEEEEeC
Confidence 56999999999999997 689999999965532 2344566889999999999999999999999988 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCC------CCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED------FSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~------~~~kl~DfGla~~~~ 516 (521)
.+|+|.+|++.++ .+++.+...++.|+|.||++||+. +||||||||.||||+.. -.+||+|||+||.+.
T Consensus 92 ~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~ 166 (429)
T KOG0595|consen 92 NGGDLSDYIRRRG--RLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQ 166 (429)
T ss_pred CCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccchhhhCC
Confidence 9999999998655 499999999999999999999999 99999999999999764 458999999999987
Q ss_pred cc
Q 009965 517 SS 518 (521)
Q Consensus 517 ~~ 518 (521)
+.
T Consensus 167 ~~ 168 (429)
T KOG0595|consen 167 PG 168 (429)
T ss_pred ch
Confidence 64
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=259.97 Aligned_cols=148 Identities=27% Similarity=0.409 Sum_probs=130.2
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.+|+|+||+||+|.+++...||||++...... ....++|.+|+.+|.+++|||||+++|+|.+... ..++|||||+
T Consensus 47 ~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~--~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~-~~~iVtEy~~ 123 (362)
T KOG0192|consen 47 EVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFD--DESRKAFRREASLLSRLRHPNIVQFYGACTSPPG-SLCIVTEYMP 123 (362)
T ss_pred hhcccCCceeEEEEEeCCceeEEEEEecchhcC--hHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC-ceEEEEEeCC
Confidence 569999999999999987666999998554322 2226789999999999999999999999987532 4799999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC-eEecCCCCCCeeecCCC-CeeeCCCchhhhccc
Q 009965 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP-FTISELNSSAVYLTEDF-SPKVSPLCLSFLLVS 517 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-ivH~Dlk~~NiLld~~~-~~kl~DfGla~~~~~ 517 (521)
+|+|.++++......++|..+++||.|||+||.|||++ + ||||||||+|||++.++ ++||+|||+++....
T Consensus 124 ~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~ 196 (362)
T KOG0192|consen 124 GGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVI 196 (362)
T ss_pred CCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeecc
Confidence 99999999864455799999999999999999999998 6 99999999999999998 999999999987764
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=259.70 Aligned_cols=149 Identities=23% Similarity=0.358 Sum_probs=134.3
Q ss_pred hhchhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEec
Q 009965 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 362 ~~~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.+.||+|.||.||.|.+++...||+|.+..... ..++|.+|+.+|.+++|+|||+++|+|..+. ..+|||||
T Consensus 210 l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m-----~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~--piyIVtE~ 282 (468)
T KOG0197|consen 210 LIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM-----SPEAFLREAQIMKKLRHEKLVKLYGVCTKQE--PIYIVTEY 282 (468)
T ss_pred HHHHhcCCccceEEEEEEcCCCcccceEEecccc-----ChhHHHHHHHHHHhCcccCeEEEEEEEecCC--ceEEEEEe
Confidence 3478999999999999999888999999865432 2457999999999999999999999999876 68999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcccccc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSSII 520 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~~~~ 520 (521)
|++|+|.+||+...+..+.-.+.+.++.|||+||+||+++ .+|||||.++|||++++..+||+||||||...+..+
T Consensus 283 m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y 358 (468)
T KOG0197|consen 283 MPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEY 358 (468)
T ss_pred cccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCCCce
Confidence 9999999999875666789999999999999999999999 999999999999999999999999999997665544
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-29 Score=242.64 Aligned_cols=156 Identities=22% Similarity=0.264 Sum_probs=136.8
Q ss_pred cCHHHHHHHHhhhhchhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEe
Q 009965 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCR 428 (521)
Q Consensus 350 ~~~~~l~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~ 428 (521)
++..|+++. +.||+|..|+|||++++ +++.+|+|.+.. ..+...++++.+|++++++.+||+||.++|.|.
T Consensus 76 i~~~dle~~-----~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~---~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~ 147 (364)
T KOG0581|consen 76 ISLSDLERL-----GVLGSGNGGTVYKVRHKPTGKIYALKVILL---NIDPALQKQILRELEILRSCQSPYIVGFYGAFY 147 (364)
T ss_pred cCHHHhhhh-----hhcccCCCcEEEEEEEcCCCeEEEEEeecc---cCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEE
Confidence 566677765 68999999999999997 788999999832 334566788999999999999999999999999
Q ss_pred cCCCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCC
Q 009965 429 ESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSP 508 (521)
Q Consensus 429 ~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~D 508 (521)
.+.. +..++||||.+|+|++++...+ .+++...-+|+.+|.+||.|||+. .+||||||||+|||++..|++||||
T Consensus 148 ~~~~-~isI~mEYMDgGSLd~~~k~~g--~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicD 222 (364)
T KOG0581|consen 148 SNGE-EISICMEYMDGGSLDDILKRVG--RIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICD 222 (364)
T ss_pred eCCc-eEEeehhhcCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEecc
Confidence 8763 4999999999999999996443 489999999999999999999963 2999999999999999999999999
Q ss_pred Cchhhhcccc
Q 009965 509 LCLSFLLVSS 518 (521)
Q Consensus 509 fGla~~~~~~ 518 (521)
||.++.+.++
T Consensus 223 FGVS~~lvnS 232 (364)
T KOG0581|consen 223 FGVSGILVNS 232 (364)
T ss_pred ccccHHhhhh
Confidence 9999988765
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.9e-30 Score=250.58 Aligned_cols=148 Identities=20% Similarity=0.243 Sum_probs=129.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|.||.||||+.. +|+.||+|++...... .....-..+||.+|+++.|||||+|.+...+......|||+|||
T Consensus 123 ~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~--~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYM 200 (560)
T KOG0600|consen 123 EKIGEGTYGQVYKARDLETGKIVALKKVRFDNEK--EGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYM 200 (560)
T ss_pred HHhcCcchhheeEeeecccCcEEEEEEeecccCC--CcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecc
Confidence 68999999999999875 7999999999654322 23344568999999999999999999999876333799999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~~ 518 (521)
++ +|..++. .....++..++..++.|++.||+|+|+. +|+|||||.+|||||.+|.+||+|||||+++...
T Consensus 201 dh-DL~GLl~-~p~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~ 271 (560)
T KOG0600|consen 201 DH-DLSGLLS-SPGVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFYTPS 271 (560)
T ss_pred cc-hhhhhhc-CCCcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeeccCC
Confidence 99 9999886 3344699999999999999999999999 9999999999999999999999999999987654
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=236.87 Aligned_cols=148 Identities=16% Similarity=0.259 Sum_probs=126.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeecccc-ch--hhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW-TG--YLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.+|+|+||.|-+|.-+ +|+.||||++....... .. .......+|+++|++++|||||++.+++...+ ..|||+
T Consensus 178 ~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d--s~YmVl 255 (475)
T KOG0615|consen 178 KTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD--SSYMVL 255 (475)
T ss_pred eeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC--ceEEEE
Confidence 78999999999999876 79999999996543211 11 11233579999999999999999999999887 789999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCC---CCeeeCCCchhhhcc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED---FSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~---~~~kl~DfGla~~~~ 516 (521)
|||++|+|.+++-.++. +.+..-..++.|++.|+.|||++ +|+||||||+|||+..+ ..+||+|||+|++.+
T Consensus 256 E~v~GGeLfd~vv~nk~--l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g 330 (475)
T KOG0615|consen 256 EYVEGGELFDKVVANKY--LREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSG 330 (475)
T ss_pred EEecCccHHHHHHhccc--cccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEecccchhhccc
Confidence 99999999999975543 77777888999999999999999 99999999999999755 789999999999986
Q ss_pred cc
Q 009965 517 SS 518 (521)
Q Consensus 517 ~~ 518 (521)
..
T Consensus 331 ~~ 332 (475)
T KOG0615|consen 331 EG 332 (475)
T ss_pred cc
Confidence 43
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.7e-28 Score=220.66 Aligned_cols=145 Identities=19% Similarity=0.248 Sum_probs=129.2
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+++|+|.||.||+|+.. +|+.||||++..... .+.......+|++.|+.++|+||+.+++.+...+ ...||+|||
T Consensus 8 ~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~--kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~--~l~lVfEfm 83 (318)
T KOG0659|consen 8 EKLGEGTYGVVYKARDTETGKRVAIKKIKLGNA--KDGINRTALREIKLLQELKHPNIIELIDVFPHKS--NLSLVFEFM 83 (318)
T ss_pred hhhcCcceEEEEEEEecCCCcEEEEEEeecccc--ccCccHHHHHHHHHHHHccCcchhhhhhhccCCC--ceEEEEEec
Confidence 68999999999999885 799999999976532 2233456789999999999999999999998777 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
+. +|+..++. ....++..+...++.++.+|++|+|.. .|+|||+||.|+|++++|.+||+|||+||.+.+
T Consensus 84 ~t-dLe~vIkd-~~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~ 153 (318)
T KOG0659|consen 84 PT-DLEVVIKD-KNIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGS 153 (318)
T ss_pred cc-cHHHHhcc-cccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCC
Confidence 87 99999974 445799999999999999999999999 999999999999999999999999999998864
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.7e-28 Score=228.65 Aligned_cols=148 Identities=20% Similarity=0.186 Sum_probs=129.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.|++|+||.||||+.+ ++..||+|+++...+. ....-.-.+||.+|.+++|||||.+..+....+-...|||||||
T Consensus 82 nrI~EGtyGiVYRakdk~t~eIVALKr~kmekek--~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~ 159 (419)
T KOG0663|consen 82 NRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEK--EGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYV 159 (419)
T ss_pred hhcccCcceeEEEeccCCcceeEEeeeccccccc--CCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHH
Confidence 78999999999999997 7889999999655421 12223458999999999999999999999877666799999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~~ 518 (521)
++ +|...++. ..+++...+...++.|+.+|++|||+. .|+|||||++|+|+..+|.+||+||||||.+++.
T Consensus 160 Eh-DLksl~d~-m~q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 160 EH-DLKSLMET-MKQPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREYGSP 230 (419)
T ss_pred Hh-hHHHHHHh-ccCCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhhcCC
Confidence 98 99999974 336799999999999999999999999 9999999999999999999999999999988754
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5e-28 Score=243.95 Aligned_cols=145 Identities=20% Similarity=0.254 Sum_probs=132.4
Q ss_pred chhCcCCCeeEEEEEe-CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTM-KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~-~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
++||+|+|+.+|+++. ..|..||+|++..+.- .....++...+||++.+.++|||||+++++|++.+ ..|||.|+|
T Consensus 24 ~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l-~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~--nVYivLELC 100 (592)
T KOG0575|consen 24 RFLGKGGFARCYEARDLDTGEVVAVKVVPKKLL-KKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSN--NVYIVLELC 100 (592)
T ss_pred eeeccCcceEEEEEEEcCCCcEEEEEEeehHHh-cCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCC--ceEEEEEec
Confidence 7999999999999999 6899999999965432 23345667899999999999999999999999988 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.++++ .+.++++.+...+..||+.||.|||+. +|+|||||..|++|++++++||+|||||..+.
T Consensus 101 ~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le 169 (592)
T KOG0575|consen 101 HRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLE 169 (592)
T ss_pred CCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeec
Confidence 9999999986 445799999999999999999999999 99999999999999999999999999999876
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.9e-29 Score=254.68 Aligned_cols=161 Identities=24% Similarity=0.335 Sum_probs=141.4
Q ss_pred cccCHHHHHHHHhhhh-----------chhCcCCCeeEEEEEeC-C---CCEEEEEEeeeeccccchhhHHHHHHHHHHH
Q 009965 348 VRFSRQELEVACEDFS-----------NIIGSSPDSLVYKGTMK-G---GPEIAVISLCIKEEHWTGYLELYFQREVADL 412 (521)
Q Consensus 348 ~~~~~~~l~~~~~~~~-----------~~ig~G~~g~Vy~~~~~-~---~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l 412 (521)
..++|+|--.+...|. ++||.|.||+||+|+++ . ...||||.++... .++.+.+|+.|..||
T Consensus 608 DP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy---tekqrrdFL~EAsIM 684 (996)
T KOG0196|consen 608 DPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY---TEKQRRDFLSEASIM 684 (996)
T ss_pred CCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc---cHHHHhhhhhhhhhc
Confidence 3467777776766663 68999999999999986 2 3579999986543 345577899999999
Q ss_pred hccCCCCccceeeEEecCCCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCC
Q 009965 413 ARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELN 492 (521)
Q Consensus 413 ~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk 492 (521)
++++||||++|.|...... ..+||+|||+||+|+.||+.+.+ .++|-+...+.++||.||.||-++ +.|||||.
T Consensus 685 GQFdHPNIIrLEGVVTks~--PvMIiTEyMENGsLDsFLR~~DG-qftviQLVgMLrGIAsGMkYLsdm---~YVHRDLA 758 (996)
T KOG0196|consen 685 GQFDHPNIIRLEGVVTKSK--PVMIITEYMENGSLDSFLRQNDG-QFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLA 758 (996)
T ss_pred ccCCCCcEEEEEEEEecCc--eeEEEhhhhhCCcHHHHHhhcCC-ceEeehHHHHHHHHHHHhHHHhhc---Cchhhhhh
Confidence 9999999999999998877 68999999999999999986665 499999999999999999999999 99999999
Q ss_pred CCCeeecCCCCeeeCCCchhhhccc
Q 009965 493 SSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 493 ~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++|||++.+...||+||||+|++++
T Consensus 759 ARNILVNsnLvCKVsDFGLSRvled 783 (996)
T KOG0196|consen 759 ARNILVNSNLVCKVSDFGLSRVLED 783 (996)
T ss_pred hhheeeccceEEEeccccceeeccc
Confidence 9999999999999999999999854
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.2e-28 Score=224.00 Aligned_cols=144 Identities=19% Similarity=0.260 Sum_probs=125.2
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
.++|+|+||+|||++.+ +|+.||||++....+ +....+-.++|+++|+.++|+|+|.++..|.... ..+||+||+
T Consensus 8 gkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esed--d~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkr--klhLVFE~~ 83 (396)
T KOG0593|consen 8 GKVGEGSYGVVMKCRNKDTGQIVAIKKFVESED--DPVVKKIALREIRMLKQLKHENLVNLIEVFRRKR--KLHLVFEYC 83 (396)
T ss_pred hccccCcceEEEEeccCCcccEEEEEeeccCCc--cHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcc--eeEEEeeec
Confidence 47999999999999997 699999999853322 3445666799999999999999999999998776 799999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++ ++.+-|. +....++.....+|..|+++|+.|+|.. +||||||||+|||++.++.+||||||+||.+.
T Consensus 84 dh-TvL~eLe-~~p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~ 152 (396)
T KOG0593|consen 84 DH-TVLHELE-RYPNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLS 152 (396)
T ss_pred ch-HHHHHHH-hccCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhc
Confidence 98 4444443 2334588999999999999999999999 99999999999999999999999999999887
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-28 Score=223.42 Aligned_cols=152 Identities=18% Similarity=0.193 Sum_probs=131.5
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEE-ecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYC-RESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~-~~~~~~~~~lv~ey 441 (521)
++||+|.||+|||+... +|..+|.|.+. ....+.+.++++..|+.+|+.++|||||+++++- ..++ .-.+|||||
T Consensus 25 ~~IG~GsFg~vykv~~~~~g~l~a~K~i~--f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~-evlnivmE~ 101 (375)
T KOG0591|consen 25 KKIGRGSFGEVYKVQCLLDGKLVALKKIQ--FGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDN-EVLNIVMEL 101 (375)
T ss_pred HHHcCCcchheEEeeeccCcchhhhhhcc--hhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccc-hhhHHHHHh
Confidence 78999999999999874 89999999885 3445667788999999999999999999999954 3333 138999999
Q ss_pred CCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 442 ASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPP--FTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 442 ~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
+..|+|.++++. +..+.+++.++.++..|++.||..+|.. .|+ |+||||||.||+||.+|.+|++||||+|++..
T Consensus 102 c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~-~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s 180 (375)
T KOG0591|consen 102 CDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSK-IPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSS 180 (375)
T ss_pred hcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhcc-ccccceeeccCcchheEEcCCCceeeccchhHhHhcc
Confidence 999999999962 3455689999999999999999999994 335 99999999999999999999999999999876
Q ss_pred cc
Q 009965 518 SI 519 (521)
Q Consensus 518 ~~ 519 (521)
..
T Consensus 181 ~~ 182 (375)
T KOG0591|consen 181 KT 182 (375)
T ss_pred hh
Confidence 53
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-27 Score=233.85 Aligned_cols=145 Identities=25% Similarity=0.383 Sum_probs=124.9
Q ss_pred hchhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHh--ccCCCCccceeeEEecCC--CCceEEE
Q 009965 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLA--RINHENTGKLLGYCRESS--PFTRMLV 438 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~--~l~H~niv~l~g~~~~~~--~~~~~lv 438 (521)
.++||+|+||.||||.+.+ +.||||++... ..+.|.+|-+|.. .++|+||++++++-.... ..+.+||
T Consensus 215 ~eli~~Grfg~V~KaqL~~-~~VAVKifp~~-------~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV 286 (534)
T KOG3653|consen 215 LELIGRGRFGCVWKAQLDN-RLVAVKIFPEQ-------EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV 286 (534)
T ss_pred HHHhhcCccceeehhhccC-ceeEEEecCHH-------HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence 3689999999999999966 88999998432 3457888888766 459999999999875432 3378999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC------CCCCeEecCCCCCCeeecCCCCeeeCCCchh
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTE------LGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~------~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla 512 (521)
+||.++|+|.+||..+ .++|....+|+.-+++||+|||+. .+|+|+|||||++|||+.+|+++.|+|||||
T Consensus 287 t~fh~kGsL~dyL~~n---tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLA 363 (534)
T KOG3653|consen 287 TEFHPKGSLCDYLKAN---TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLA 363 (534)
T ss_pred eeeccCCcHHHHHHhc---cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecccee
Confidence 9999999999999644 389999999999999999999976 3589999999999999999999999999999
Q ss_pred hhcccc
Q 009965 513 FLLVSS 518 (521)
Q Consensus 513 ~~~~~~ 518 (521)
..+.++
T Consensus 364 l~~~p~ 369 (534)
T KOG3653|consen 364 LRLEPG 369 (534)
T ss_pred EEecCC
Confidence 988754
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-27 Score=248.75 Aligned_cols=147 Identities=29% Similarity=0.400 Sum_probs=128.9
Q ss_pred hhchhCcCCCeeEEEEEeCC------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCce
Q 009965 362 FSNIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 362 ~~~~ig~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 435 (521)
|.+.||+|.||+||+|+..+ ...||||.++.+. +.+.+++|++|+++++.++|||||+|+|.|..++ ..
T Consensus 490 ~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a---~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~--P~ 564 (774)
T KOG1026|consen 490 FKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA---ENQARQDFRREAELLAELQHPNIVRLLGVCREGD--PL 564 (774)
T ss_pred ehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc---cHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCC--ee
Confidence 34789999999999998642 4579999985433 3356789999999999999999999999999888 68
Q ss_pred EEEEecCCCCChhhhhccC--------C----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCC
Q 009965 436 MLVFDYASNGTLYEHLHYG--------E----RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503 (521)
Q Consensus 436 ~lv~ey~~~gsL~~~l~~~--------~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~ 503 (521)
++|+|||.+|||.+||+-. . ..+|+..+.+.||.|||.||+||-+. .+|||||.++|+|+.+++.
T Consensus 565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l~ 641 (774)
T KOG1026|consen 565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENLV 641 (774)
T ss_pred EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccceE
Confidence 9999999999999999731 1 22389999999999999999999999 9999999999999999999
Q ss_pred eeeCCCchhhhcc
Q 009965 504 PKVSPLCLSFLLV 516 (521)
Q Consensus 504 ~kl~DfGla~~~~ 516 (521)
+||+||||+|-.-
T Consensus 642 VKIsDfGLsRdiY 654 (774)
T KOG1026|consen 642 VKISDFGLSRDIY 654 (774)
T ss_pred EEecccccchhhh
Confidence 9999999998653
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.9e-28 Score=236.69 Aligned_cols=145 Identities=23% Similarity=0.297 Sum_probs=129.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||.|.||.||+|+-. ++..||||+++.+...|.+.. =.+|+..|.++. |||||++...+.+.+. ..++||||
T Consensus 16 ~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~---nLREvksL~kln~hpniikL~Evi~d~~~-~L~fVfE~ 91 (538)
T KOG0661|consen 16 RKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECM---NLREVKSLRKLNPHPNIIKLKEVIRDNDR-ILYFVFEF 91 (538)
T ss_pred HHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHH---HHHHHHHHHhcCCCCcchhhHHHhhccCc-eEeeeHHh
Confidence 78999999999999876 788999999976666554332 378999999998 9999999999987654 79999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
|+. +|+++++.+ .+.+++..+..|+.||.+||+|+|.+ |+.|||+||+|||+.....+||+||||||.+.+
T Consensus 92 Md~-NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S 162 (538)
T KOG0661|consen 92 MDC-NLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREVRS 162 (538)
T ss_pred hhh-hHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccccccccccc
Confidence 987 999999866 67899999999999999999999999 999999999999999889999999999998754
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.4e-27 Score=224.60 Aligned_cols=147 Identities=24% Similarity=0.252 Sum_probs=129.5
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceE
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
++|. ++||+|+||+||.++-+ +++.+|+|.+.++. .......+...+|..+|.+++||.||++.-.+++.. ..|
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~-iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~--kLy 101 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKK-IVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEE--KLY 101 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhH-hhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCC--eEE
Confidence 4454 89999999999999886 68899999986543 222334567899999999999999999999888877 899
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
+|+||+.||.|..+|.++. .+++.+..-++..|+.||.|||+. +||||||||+|||||++|+++|+||||++.
T Consensus 102 lVld~~~GGeLf~hL~~eg--~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~ 174 (357)
T KOG0598|consen 102 LVLDYLNGGELFYHLQREG--RFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKE 174 (357)
T ss_pred EEEeccCCccHHHHHHhcC--CcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchh
Confidence 9999999999999996544 388998888999999999999999 999999999999999999999999999995
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-27 Score=238.94 Aligned_cols=140 Identities=29% Similarity=0.478 Sum_probs=126.5
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||+||||++.+. ||||++.+.... ....+.|++|+..+++-||.||+-++|||..+. ..||+.||+
T Consensus 398 ~rIGsGsFGtV~Rg~whGd--VAVK~Lnv~~pt--~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~---~AIiTqwCe 470 (678)
T KOG0193|consen 398 ERIGSGSFGTVYRGRWHGD--VAVKLLNVDDPT--PEQLQAFKNEVAVLKKTRHENILLFMGACMNPP---LAIITQWCE 470 (678)
T ss_pred ceeccccccceeecccccc--eEEEEEecCCCC--HHHHHHHHHHHHHHhhcchhhheeeehhhcCCc---eeeeehhcc
Confidence 7899999999999999763 999999776533 335678999999999999999999999998875 499999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
+-+|+.++|-.. ..++..+.+.||.|||+||.|||.+ +|||||||+.||+++++++|||+||||+..
T Consensus 471 GsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGLatv 537 (678)
T KOG0193|consen 471 GSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGLATV 537 (678)
T ss_pred Cchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccceee
Confidence 999999998443 4589999999999999999999999 999999999999999999999999999864
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.4e-26 Score=262.09 Aligned_cols=219 Identities=34% Similarity=0.607 Sum_probs=148.4
Q ss_pred CchhHHHHHHHHHHhcccCCCCCCCCCCCCCCCCCCccceeeCCCCCCEEEEEecCCCCCccCCccccCCCCCCEEECcC
Q 009965 24 FATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHG 103 (521)
Q Consensus 24 ~~~~~~~~L~~~k~~~~~~~~~~l~~W~~~~~~~c~w~gv~C~~~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~ 103 (521)
..++|..+|++||+++. +|...+.+|+. ..+||.|.||+|+. .++|+.|+|++|.++|.+++.+..+++|+.|+|++
T Consensus 26 ~~~~~~~~l~~~~~~~~-~~~~~~~~w~~-~~~~c~w~gv~c~~-~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~ 102 (968)
T PLN00113 26 LHAEELELLLSFKSSIN-DPLKYLSNWNS-SADVCLWQGITCNN-SSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSN 102 (968)
T ss_pred CCHHHHHHHHHHHHhCC-CCcccCCCCCC-CCCCCcCcceecCC-CCcEEEEEecCCCccccCChHHhCCCCCCEEECCC
Confidence 46689999999999995 67777899975 45899999999985 56899999999999999999999999999999999
Q ss_pred CcccccCCcccc-CCCCCcEEEccCCcCCCCCCcccCCCccCceeecccccCcccCchhhhCCCCCCEEeCCCCCCCccC
Q 009965 104 NNLIGIIPKELG-LLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAV 182 (521)
Q Consensus 104 N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~ 182 (521)
|+++|.+|..+. .+++|++|+|++|+++|.+|. +.+++|++|+|++|.+++.+|..++++++|++|+|++|.+++.+
T Consensus 103 n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 180 (968)
T PLN00113 103 NQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKI 180 (968)
T ss_pred CccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccC
Confidence 999988887654 777777777777777665553 23445555555555555555555555555555555555554444
Q ss_pred CCCCCC----------------------cccccccccccccCCcCc-----ccCCCCCCEEeccCCccccCCccccc---
Q 009965 183 PAGSNS----------------------GYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCLE--- 232 (521)
Q Consensus 183 p~~~~~----------------------~~~~~l~~l~l~~n~l~~-----~~~l~~L~~L~ls~N~l~g~ip~~l~--- 232 (521)
|..... ....++..++++.|.+++ +..+++|++|++++|++++.+|..+.
T Consensus 181 p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 260 (968)
T PLN00113 181 PNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLK 260 (968)
T ss_pred ChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCC
Confidence 432111 001344555555555543 33456666666666666666665543
Q ss_pred cCCCcccCCCcCCCC
Q 009965 233 YLPSTSFQGNCLQNK 247 (521)
Q Consensus 233 ~l~~l~~~~N~l~~~ 247 (521)
+|+.+++++|.+.+.
T Consensus 261 ~L~~L~L~~n~l~~~ 275 (968)
T PLN00113 261 NLQYLFLYQNKLSGP 275 (968)
T ss_pred CCCEEECcCCeeecc
Confidence 344556666665543
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=235.46 Aligned_cols=146 Identities=22% Similarity=0.284 Sum_probs=127.7
Q ss_pred chhCcCCCeeEEEEEeCC--C--CE-EEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEE
Q 009965 364 NIIGSSPDSLVYKGTMKG--G--PE-IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~--~--~~-vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
++||+|+||.||+|++.. + .. ||||....+ .........+|++|.++|+.++|||||+++|++.... ..+||
T Consensus 163 kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~-~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~--Pl~iv 239 (474)
T KOG0194|consen 163 KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGS-SELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEE--PLMLV 239 (474)
T ss_pred ceeecccccEEEEEEEEecCCceeeeeEEEeeccc-ccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC--ccEEE
Confidence 799999999999999863 2 23 888887432 2233455688999999999999999999999999887 68999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
||+|++|+|.++|+.... .++..++++++.++|.||+|||.. +++||||.++|+|++.++.+||+|||+++.-.
T Consensus 240 mEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~ 313 (474)
T KOG0194|consen 240 MELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGLSRAGS 313 (474)
T ss_pred EEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCccccccCCc
Confidence 999999999999975543 599999999999999999999999 99999999999999999999999999988653
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.7e-27 Score=223.87 Aligned_cols=147 Identities=19% Similarity=0.259 Sum_probs=131.2
Q ss_pred hchhCcCCCeeEEEEEe-CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEec
Q 009965 363 SNIIGSSPDSLVYKGTM-KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~-~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
.+.+|+|.||.|-++.. ..|+.||||.+... +..+.+..-.+++|++||..++||||++++.+|+..+ ...|||||
T Consensus 58 ~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKd-kIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkd--KIvivMEY 134 (668)
T KOG0611|consen 58 TETLGKGTYGKVKLAYEHKSGREVAIKSIRKD-KIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKD--KIVIVMEY 134 (668)
T ss_pred HHHhcCCcccceeehhhccCCcEeehhhhhhh-hcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCc--eEEEEEEe
Confidence 37899999999999987 47999999998543 3333445567899999999999999999999999877 89999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
..+|.|++|+.++. .|++.+...+++||..|+.|+|.. +++|||||.+|||+|+++++||+||||+.++.+
T Consensus 135 aS~GeLYDYiSer~--~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~~ 205 (668)
T KOG0611|consen 135 ASGGELYDYISERG--SLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYAD 205 (668)
T ss_pred cCCccHHHHHHHhc--cccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhcc
Confidence 99999999997554 499999999999999999999999 999999999999999999999999999988764
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.9e-27 Score=232.08 Aligned_cols=149 Identities=23% Similarity=0.262 Sum_probs=131.0
Q ss_pred hhchhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEEE
Q 009965 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 362 ~~~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
|.+.||+|+|++||+|+.. +++++|||++.++.-. .+...+.+..|-.+|.+| .||.|++|+-.|.++. ..|.|+
T Consensus 77 Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Ii-ke~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~--sLYFvL 153 (604)
T KOG0592|consen 77 FGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYII-KEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEE--SLYFVL 153 (604)
T ss_pred hhheeccccceeEEEeeecCCCceeeHhhhhHHHHH-hhcccchhhHHHHHHHHhhCCCCeEEEEEEeeccc--ceEEEE
Confidence 4589999999999999886 6899999998554321 222345677888999999 8999999999999887 899999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcccc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~~ 518 (521)
||+++|+|.++|++-+ .+++.....++.+|..||+|||+. +||||||||+|||||+||++||+|||-|+.+.++
T Consensus 154 e~A~nGdll~~i~K~G--sfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~ 227 (604)
T KOG0592|consen 154 EYAPNGDLLDLIKKYG--SFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAKILSPS 227 (604)
T ss_pred EecCCCcHHHHHHHhC--cchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccccCChh
Confidence 9999999999997554 488888899999999999999999 9999999999999999999999999999998764
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-26 Score=229.41 Aligned_cols=155 Identities=25% Similarity=0.307 Sum_probs=133.5
Q ss_pred HHHHHHhhhhchhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCC
Q 009965 354 ELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433 (521)
Q Consensus 354 ~l~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 433 (521)
|..+..--|.++||+|.||.|..+....+..||||++... .....+.+|.+|+++|.+++|||||+++|.|..++
T Consensus 534 EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~---a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~De-- 608 (807)
T KOG1094|consen 534 EFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPD---ATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDD-- 608 (807)
T ss_pred hcchhheehhhhhcCcccceeEEEEecCceEEEEeecCcc---cchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCC--
Confidence 3333333345899999999999999988899999998543 33456789999999999999999999999999888
Q ss_pred ceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhh
Q 009965 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSF 513 (521)
Q Consensus 434 ~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~ 513 (521)
..++|+|||++|+|.+|+........+-...++|+.|||.||+||.+. ++||||+.++|+|+|.++++||+|||++|
T Consensus 609 PicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR 685 (807)
T KOG1094|consen 609 PLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSR 685 (807)
T ss_pred chHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCccccc
Confidence 689999999999999999865433345566788999999999999998 99999999999999999999999999999
Q ss_pred hcc
Q 009965 514 LLV 516 (521)
Q Consensus 514 ~~~ 516 (521)
-+-
T Consensus 686 ~ly 688 (807)
T KOG1094|consen 686 NLY 688 (807)
T ss_pred ccc
Confidence 543
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.6e-27 Score=209.51 Aligned_cols=144 Identities=22% Similarity=0.283 Sum_probs=129.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
..+|+|.||.||.|+.+ ++-.||+|++.+. +....+.++++.+|+++-+.++||||+++++|+.+.. ..||++||.
T Consensus 28 r~LgkgkFG~vYlarekks~~IvalKVlfKs-qi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~--riyLilEya 104 (281)
T KOG0580|consen 28 RPLGKGKFGNVYLAREKKSLFIVALKVLFKS-QILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSK--RIYLILEYA 104 (281)
T ss_pred ccccCCccccEeEeeeccCCcEEEEeeeeHH-HHHHhcchhhhhheeEeecccCCccHHhhhhheeccc--eeEEEEEec
Confidence 78999999999999987 6788999998543 3334556788999999999999999999999999988 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhh
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSF 513 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~ 513 (521)
+.|++...|+......+++.....++.|+|.||.|+|.. +|+||||||+|+|++.++..||+|||-+-
T Consensus 105 ~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV 172 (281)
T KOG0580|consen 105 PRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSV 172 (281)
T ss_pred CCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCcee
Confidence 999999999866666688889999999999999999998 99999999999999999999999999654
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.3e-27 Score=221.95 Aligned_cols=143 Identities=21% Similarity=0.320 Sum_probs=120.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCC---ceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF---TRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~---~~~lv~ 439 (521)
+++|+|+||.||+|... ++..||||++....+. --+|+.+|++++|||||+|.-++....+. ...+||
T Consensus 30 ~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~--------knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVl 101 (364)
T KOG0658|consen 30 RLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY--------KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVL 101 (364)
T ss_pred EEEeecccceEEEEEEcCCCceeEEEEecCCCCc--------CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHH
Confidence 78999999999999986 5789999998544322 24699999999999999999988654432 456899
Q ss_pred ecCCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCC-CCeeeCCCchhhhcc
Q 009965 440 DYASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED-FSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~-~~~kl~DfGla~~~~ 516 (521)
||||. +|.++++. ...+.++...+.-+..|+.+||+|||+. +|+||||||.|+|+|.+ |.+||||||-|+.+.
T Consensus 102 eymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~ 177 (364)
T KOG0658|consen 102 EYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAKVLV 177 (364)
T ss_pred HhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcceeec
Confidence 99998 99999973 1234567777788999999999999998 99999999999999965 999999999999887
Q ss_pred cc
Q 009965 517 SS 518 (521)
Q Consensus 517 ~~ 518 (521)
+.
T Consensus 178 ~~ 179 (364)
T KOG0658|consen 178 KG 179 (364)
T ss_pred cC
Confidence 53
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.4e-26 Score=210.82 Aligned_cols=148 Identities=18% Similarity=0.168 Sum_probs=130.5
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
..+|.|+||.|..++.+ +|..+|+|++....-- .-+..+...+|..+|..++||.++++.+.|.+.. ..+|||||+
T Consensus 50 ~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vV-klKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~--~lymvmeyv 126 (355)
T KOG0616|consen 50 KTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVV-KLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNS--NLYMVMEYV 126 (355)
T ss_pred eeeccCccceEEEEEEccCCceeehhhcCHHHHH-HHHHHHHHhhHHHHHhhccCceeEEEEEeeccCC--eEEEEEecc
Confidence 67999999999999997 6889999998544321 1122356789999999999999999999999887 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSSI 519 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~~~ 519 (521)
++|.|..+++..+ .++++...-+|.+|+.||+|||+. .|++|||||+|||||.+|.+||+|||+|+......
T Consensus 127 ~GGElFS~Lrk~~--rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT 198 (355)
T KOG0616|consen 127 PGGELFSYLRKSG--RFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRT 198 (355)
T ss_pred CCccHHHHHHhcC--CCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecCcE
Confidence 9999999997544 489999999999999999999999 99999999999999999999999999999876543
|
|
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-25 Score=213.59 Aligned_cols=147 Identities=19% Similarity=0.227 Sum_probs=126.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCC-ccceeeEEecCCC----CceEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN-TGKLLGYCRESSP----FTRML 437 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n-iv~l~g~~~~~~~----~~~~l 437 (521)
++||+|+||+||+|+.. +|+.||+|++....++ +.......+|+.++.+++|+| ||++.+++...+. ...++
T Consensus 17 eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~--EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~l 94 (323)
T KOG0594|consen 17 EKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE--EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYL 94 (323)
T ss_pred HHhCCCCceEEEEEEEecCCCEEEEEEEeccccc--cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEE
Confidence 67999999999999986 7899999999765432 234455789999999999999 9999999987552 24789
Q ss_pred EEecCCCCChhhhhccCCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 438 VFDYASNGTLYEHLHYGER--CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 438 v~ey~~~gsL~~~l~~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
|+||++. +|..++..... ..++-..+..++.|+.+||+|||+. +|+||||||.|||++++|.+||+|||+|+.+
T Consensus 95 vfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~ 170 (323)
T KOG0594|consen 95 VFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFGLARAF 170 (323)
T ss_pred EEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccchHHHh
Confidence 9999987 99999974432 3577788999999999999999999 9999999999999999999999999999965
Q ss_pred c
Q 009965 516 V 516 (521)
Q Consensus 516 ~ 516 (521)
.
T Consensus 171 ~ 171 (323)
T KOG0594|consen 171 S 171 (323)
T ss_pred c
Confidence 4
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=219.96 Aligned_cols=146 Identities=24% Similarity=0.222 Sum_probs=124.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccc------hh----hHHHHHHHHHHHhccCCCCccceeeEEecCCC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWT------GY----LELYFQREVADLARINHENTGKLLGYCRESSP 432 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~------~~----~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 432 (521)
..||+|.||.|-+|+.. +++.||||++.++..... .. ..+...+||.+|++++|||||+|+.+..+...
T Consensus 103 ~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLDDP~s 182 (576)
T KOG0585|consen 103 KEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLDDPES 182 (576)
T ss_pred hhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeecCccc
Confidence 67999999999999987 789999999965542110 00 12478999999999999999999999988776
Q ss_pred CceEEEEecCCCCChhhhhccCCCCC-CCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCch
Q 009965 433 FTRMLVFDYASNGTLYEHLHYGERCQ-VSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCL 511 (521)
Q Consensus 433 ~~~~lv~ey~~~gsL~~~l~~~~~~~-l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGl 511 (521)
...|||+|||..|.+...- ...+ ++..+..+|.+++..||+|||.+ +||||||||+|+||++++++||+|||.
T Consensus 183 ~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g~VKIsDFGV 256 (576)
T KOG0585|consen 183 DKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDGTVKISDFGV 256 (576)
T ss_pred CceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCCcEEeeccce
Confidence 6899999999998886432 2233 89999999999999999999999 999999999999999999999999999
Q ss_pred hhhc
Q 009965 512 SFLL 515 (521)
Q Consensus 512 a~~~ 515 (521)
+...
T Consensus 257 s~~~ 260 (576)
T KOG0585|consen 257 SNEF 260 (576)
T ss_pred eeec
Confidence 8765
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.5e-26 Score=226.52 Aligned_cols=144 Identities=19% Similarity=0.234 Sum_probs=129.6
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||||+-+ +.+.||+|.+.+..+ ..++.+.+.+|++++++++|||||.++++|+... +.++|+||+
T Consensus 8 e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr--~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~--~~~vVte~a 83 (808)
T KOG0597|consen 8 EMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR--NEKELKNLRQEVRILRSLKHPNIVEMLESFETSA--HLWVVTEYA 83 (808)
T ss_pred HHhcCCccceeeecccccceeEEEEEEehhcCC--chHHHHHHHHHHHHHHhcCCcchhhHHHhhcccc--eEEEEehhh
Confidence 78999999999999887 678899999854332 3445677999999999999999999999999988 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
.+ +|..+|.... .+++.....|+.++..||.|||+. +|+|||+||.|||++..+.+|+||||+||.+..
T Consensus 84 ~g-~L~~il~~d~--~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~ 152 (808)
T KOG0597|consen 84 VG-DLFTILEQDG--KLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMST 152 (808)
T ss_pred hh-hHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhccc
Confidence 87 9999996544 499999999999999999999999 999999999999999999999999999998754
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-25 Score=217.39 Aligned_cols=146 Identities=21% Similarity=0.287 Sum_probs=126.9
Q ss_pred hchhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEec
Q 009965 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
.+.||+|+||.||.+... +|...|||.+...... ..+.+.+|+.+|.+++|||||+++|..........++.|||
T Consensus 22 ~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~----~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy 97 (313)
T KOG0198|consen 22 GKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSP----TSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEY 97 (313)
T ss_pred hccccCccceEEEEEEecCCCcceeeeeeecccch----hHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeec
Confidence 378999999999999986 4889999998544111 14568999999999999999999997544431247899999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC-CCCeeeCCCchhhhcc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~-~~~~kl~DfGla~~~~ 516 (521)
+++|+|.+++...+. .+++..+.++..||++||+|||++ +||||||||+|||++. ++.+||+|||+++...
T Consensus 98 ~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~ 169 (313)
T KOG0198|consen 98 APGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLE 169 (313)
T ss_pred cCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCccccccc
Confidence 999999999976554 699999999999999999999999 9999999999999999 7999999999999776
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=5e-25 Score=222.20 Aligned_cols=145 Identities=20% Similarity=0.267 Sum_probs=126.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccc-cchhhHHHHHHHHHHHhccC-CCCccceeeEEecCCCCceEEEEe
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH-WTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~-~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
+.||+|+||+||.|+.. ++..||+|.+..+... ......+.+.+|+.++++++ ||||++++.++.... ..++|||
T Consensus 23 ~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~--~~~ivmE 100 (370)
T KOG0583|consen 23 RTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT--KIYIVME 100 (370)
T ss_pred eeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC--eEEEEEE
Confidence 78999999999999886 7899999966433111 11133456778999999998 999999999999887 7999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCC-CCeeeCCCchhhhc
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED-FSPKVSPLCLSFLL 515 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~-~~~kl~DfGla~~~ 515 (521)
|+.+|+|.+++... ..+.+....+++.|++.|++|+|+. +|+||||||+|||+|.+ +++||+|||++...
T Consensus 101 y~~gGdL~~~i~~~--g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~ 171 (370)
T KOG0583|consen 101 YCSGGDLFDYIVNK--GRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGLSAIS 171 (370)
T ss_pred ecCCccHHHHHHHc--CCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEecccccccc
Confidence 99999999999763 3588899999999999999999999 99999999999999999 99999999999988
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.9e-25 Score=241.71 Aligned_cols=149 Identities=22% Similarity=0.371 Sum_probs=129.3
Q ss_pred HhhhhchhCcCCCeeEEEEEeCC--CC----EEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC
Q 009965 359 CEDFSNIIGSSPDSLVYKGTMKG--GP----EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432 (521)
Q Consensus 359 ~~~~~~~ig~G~~g~Vy~~~~~~--~~----~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 432 (521)
...+...||+|+||.||+|.+.+ +. .||||.+.. ..+.+...+|.+|..+|++++|||||+++|+|.+..
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~---~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~- 768 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKR---LSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSG- 768 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccc---cCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCC-
Confidence 33345789999999999999863 43 388888743 233456778999999999999999999999999866
Q ss_pred CceEEEEecCCCCChhhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeC
Q 009965 433 FTRMLVFDYASNGTLYEHLHYGE-----RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVS 507 (521)
Q Consensus 433 ~~~~lv~ey~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~ 507 (521)
..+|++|||++|+|..||++.. ...++-.+.+.|+.|||+|+.||+++ ++|||||.++|+||++...|||+
T Consensus 769 -~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIa 844 (1025)
T KOG1095|consen 769 -PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIA 844 (1025)
T ss_pred -CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEc
Confidence 6899999999999999998541 34689999999999999999999999 99999999999999999999999
Q ss_pred CCchhhhc
Q 009965 508 PLCLSFLL 515 (521)
Q Consensus 508 DfGla~~~ 515 (521)
|||+||.+
T Consensus 845 DFGlArDi 852 (1025)
T KOG1095|consen 845 DFGLARDI 852 (1025)
T ss_pred ccchhHhh
Confidence 99999943
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.92 E-value=8e-25 Score=221.01 Aligned_cols=145 Identities=20% Similarity=0.280 Sum_probs=122.5
Q ss_pred chhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceE
Q 009965 364 NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 436 (521)
++||+|+||.||+|... ++..||||++.... .....+.+.+|+.++.++ +||||++++++|...+. ..+
T Consensus 13 ~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~-~~~ 88 (338)
T cd05102 13 KVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA---TASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG-PLM 88 (338)
T ss_pred eEeccCCcceEEEEEEeccCCcccchhhheecccccc---chHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC-ceE
Confidence 78999999999999752 35679999885321 122345789999999999 89999999999876442 578
Q ss_pred EEEecCCCCChhhhhccCC------------------------------------------------------------C
Q 009965 437 LVFDYASNGTLYEHLHYGE------------------------------------------------------------R 456 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~------------------------------------------------------------~ 456 (521)
+||||+++|+|.+++.... .
T Consensus 89 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (338)
T cd05102 89 VIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWK 168 (338)
T ss_pred EEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcccccc
Confidence 9999999999999986321 1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 457 CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 457 ~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
.++++.++.+++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++.+
T Consensus 169 ~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~ 224 (338)
T cd05102 169 SPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDI 224 (338)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeeccccccc
Confidence 3488999999999999999999998 9999999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-24 Score=218.14 Aligned_cols=144 Identities=20% Similarity=0.104 Sum_probs=125.3
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
++||+|+||.||+++.. +|+.||+|.+..... ........+.+|+.++.+++||||+++++++...+ ..++||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~--~~~lv~e~~ 77 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVI-IAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHD--RLCFVMEYA 77 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHh-hhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCC--EEEEEEeCC
Confidence 36899999999999886 788999999854321 11223456789999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
++|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 78 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~ 145 (323)
T cd05571 78 NGGELFFHLSRER--VFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEG 145 (323)
T ss_pred CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCccc
Confidence 9999999986433 589999999999999999999998 9999999999999999999999999998753
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.2e-25 Score=217.52 Aligned_cols=149 Identities=17% Similarity=0.129 Sum_probs=129.6
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceE
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
++|. .+||+|+||.||.|+-+ +|..+|+|++.+.... .....+.++.|-.+|...++|.||+|+-.|.+.. ..|
T Consensus 141 ~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~-~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~--~LY 217 (550)
T KOG0605|consen 141 DDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEML-KKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKE--YLY 217 (550)
T ss_pred ccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHH-hhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCC--eeE
Confidence 4454 78999999999999886 6999999999654422 2233457889999999999999999999998887 899
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|||||++||++..+|.... .|++.....++.+.+-|++-+|+. ++|||||||+|+|||..|++||+||||++-+.
T Consensus 218 LiMEylPGGD~mTLL~~~~--~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~ 292 (550)
T KOG0605|consen 218 LIMEYLPGGDMMTLLMRKD--TLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD 292 (550)
T ss_pred EEEEecCCccHHHHHHhcC--cCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchhh
Confidence 9999999999999997544 488888888999999999999999 99999999999999999999999999997654
|
|
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-24 Score=222.05 Aligned_cols=145 Identities=14% Similarity=0.075 Sum_probs=127.0
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+++.. +++.||+|++..... ........+.+|+.++.+++||||+++++.+.+.. ..++||||+
T Consensus 7 ~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~--~~~lv~E~~ 83 (363)
T cd05628 7 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADM-LEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKL--NLYLIMEFL 83 (363)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHH-HHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCC--eEEEEEcCC
Confidence 78999999999999886 688999999854321 11223456889999999999999999999998877 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 84 ~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~ 152 (363)
T cd05628 84 PGGDMMTLLMKKD--TLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLK 152 (363)
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCccccc
Confidence 9999999996443 589999999999999999999998 99999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-24 Score=213.48 Aligned_cols=147 Identities=18% Similarity=0.122 Sum_probs=127.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|... +++.||+|.+...... .......+.+|+.++.+++|+||+++++++.+.+ ..++||||+
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~--~~~lv~e~~ 82 (285)
T cd05631 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-KRKGEAMALNEKRILEKVNSRFVVSLAYAYETKD--ALCLVLTIM 82 (285)
T ss_pred EEEecCCCEEEEEEEEecCCceEEEEEeeHhhhh-hhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCC--eEEEEEEec
Confidence 68999999999999885 7899999988543211 1223346789999999999999999999998877 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 83 ~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~ 153 (285)
T cd05631 83 NGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIP 153 (285)
T ss_pred CCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcC
Confidence 999999888644444689999999999999999999998 99999999999999999999999999998653
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.1e-24 Score=214.54 Aligned_cols=145 Identities=23% Similarity=0.312 Sum_probs=123.9
Q ss_pred hchhCcCCCeeEEEEEeCC-----------------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceee
Q 009965 363 SNIIGSSPDSLVYKGTMKG-----------------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~~-----------------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g 425 (521)
.+.||+|+||.||+|.+++ +..||+|.+.... ......+|.+|++++.+++||||+++++
T Consensus 10 ~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~ 86 (304)
T cd05096 10 KEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA---NKNARNDFLKEVKILSRLKDPNIIRLLG 86 (304)
T ss_pred eeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC---CHHHHHHHHHHHHHHhhcCCCCeeEEEE
Confidence 3789999999999998642 2369999874321 2234567999999999999999999999
Q ss_pred EEecCCCCceEEEEecCCCCChhhhhccCC-----------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEe
Q 009965 426 YCRESSPFTRMLVFDYASNGTLYEHLHYGE-----------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTI 488 (521)
Q Consensus 426 ~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~-----------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH 488 (521)
++.+.+ ..++||||+++|+|.+++.... ...++|.++.+|+.|++.||+|||+. +|+|
T Consensus 87 ~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~ivH 161 (304)
T cd05096 87 VCVDED--PLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFVH 161 (304)
T ss_pred EEecCC--ceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Cccc
Confidence 998876 7899999999999999985321 12478999999999999999999998 9999
Q ss_pred cCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 489 SELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 489 ~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
|||||+|||+++++.+||+|||+++.+
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~ 188 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNL 188 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceec
Confidence 999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-24 Score=215.47 Aligned_cols=146 Identities=16% Similarity=0.171 Sum_probs=127.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|.+...... .....+.+.+|+.++.+++||||+++++++.+.. ..++||||+
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~ 83 (291)
T cd05612 7 KTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVI-RLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQR--FLYMLMEYV 83 (291)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHh-hhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCC--eEEEEEeCC
Confidence 78999999999999987 6889999998543211 1223456889999999999999999999998776 799999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+..
T Consensus 84 ~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~ 153 (291)
T cd05612 84 PGGELFSYLRNSG--RFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD 153 (291)
T ss_pred CCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccC
Confidence 9999999996443 589999999999999999999998 999999999999999999999999999987643
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.3e-24 Score=216.18 Aligned_cols=144 Identities=19% Similarity=0.112 Sum_probs=125.0
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
++||+|+||.||+++.. +|..||+|.+...... .......+.+|+.++.+++||||+++++++...+ ..++||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~--~~~lv~E~~ 77 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVII-AKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD--RLCFVMEYA 77 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCC--EEEEEEeCC
Confidence 36899999999999886 6899999998543211 1223456788999999999999999999998876 799999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 78 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~ 145 (323)
T cd05595 78 NGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG 145 (323)
T ss_pred CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccc
Confidence 9999999886433 589999999999999999999998 9999999999999999999999999998753
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-24 Score=217.71 Aligned_cols=146 Identities=14% Similarity=0.170 Sum_probs=127.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|.+..... ......+.+.+|+.++.+++||||+++++++.+.+ ..++||||+
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~ 100 (329)
T PTZ00263 24 ETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREI-LKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDEN--RVYFLLEFV 100 (329)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHH-hhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCC--EEEEEEcCC
Confidence 78999999999999987 688999999853321 11223456899999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.+
T Consensus 101 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 170 (329)
T PTZ00263 101 VGGELFTHLRKAG--RFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD 170 (329)
T ss_pred CCChHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence 9999999996443 478899999999999999999998 999999999999999999999999999986643
|
|
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.5e-24 Score=216.38 Aligned_cols=144 Identities=19% Similarity=0.110 Sum_probs=125.5
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. +++.||+|.+..... ........+.+|+.+++.++||||+++.+++...+ ..++||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~Ey~ 77 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVI-IAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKD--RLCFVMEYV 77 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCC--EEEEEEeCC
Confidence 36899999999999886 689999999854321 12233457889999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
++|+|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 78 ~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~ 145 (328)
T cd05593 78 NGGELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEG 145 (328)
T ss_pred CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccC
Confidence 999999988643 3589999999999999999999998 9999999999999999999999999998753
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-24 Score=221.73 Aligned_cols=144 Identities=16% Similarity=0.073 Sum_probs=125.9
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. +++.||||.+..... ......+.+.+|++++.+++||||+++++++.+.. ..++||||+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~--~~~lv~E~~ 83 (377)
T cd05629 7 KVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEM-FKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQ--YLYLIMEFL 83 (377)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHH-HHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC--eeEEEEeCC
Confidence 78999999999999886 788999999854321 12233467889999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+
T Consensus 84 ~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~ 151 (377)
T cd05629 84 PGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGF 151 (377)
T ss_pred CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeeccccccc
Confidence 999999999643 3488999999999999999999998 9999999999999999999999999999743
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-24 Score=210.30 Aligned_cols=146 Identities=16% Similarity=0.203 Sum_probs=130.3
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
++||.|..++||+|+.. .+..||||++....-+ ...+.+.+|+..|+.++||||++++..|..+. ..|+||.||
T Consensus 32 e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~---~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~--~LWvVmpfM 106 (516)
T KOG0582|consen 32 EVIGVGASAVVYLARCIPTNEVVAIKIINLEKCN---NDLDALRKEVQTMSLIDHPNIVTYHCSFVVDS--ELWVVMPFM 106 (516)
T ss_pred EEEeccceeEeeeeeecccCCEEEEEEeehhhhh---hhHHHHHHHHHHhhhcCCCCcceEEEEEEecc--eeEEeehhh
Confidence 79999999999999885 6799999999654322 22567899999999999999999999998887 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
.+|++.+.++..-...+++..+..|.+++.+||.|||++ |.||||||+.|||||++|.+||+|||.+-.+.+
T Consensus 107 a~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~ 178 (516)
T KOG0582|consen 107 AGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFD 178 (516)
T ss_pred cCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeecc
Confidence 999999999865555699999999999999999999999 999999999999999999999999998766544
|
|
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-24 Score=221.21 Aligned_cols=145 Identities=16% Similarity=0.091 Sum_probs=127.3
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +++.||||.+..... ........+.+|+.++..++||||+++++++.+.+ ..++||||+
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~--~~~lv~E~~ 83 (364)
T cd05599 7 KVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEM-LEKEQVAHVRAERDILAEADNPWVVKLYYSFQDEN--YLYLIMEYL 83 (364)
T ss_pred EEEEecCCEEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCC--eEEEEECCC
Confidence 78999999999999986 688999999854321 11233456889999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.... .+++..+..|+.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 84 ~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 152 (364)
T cd05599 84 PGGDMMTLLMKKD--TFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLK 152 (364)
T ss_pred CCcHHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceecc
Confidence 9999999996443 489999999999999999999999 99999999999999999999999999998653
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.5e-24 Score=214.91 Aligned_cols=142 Identities=16% Similarity=0.088 Sum_probs=124.1
Q ss_pred hCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCCC
Q 009965 366 IGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASN 444 (521)
Q Consensus 366 ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~~ 444 (521)
||+|+||.||+|+.. +++.||+|.+..... ........+.+|+.++.+++||||+++++++...+ ..++||||+++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~~~ 77 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHI-VSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPE--KLYLVLAFING 77 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCC--eEEEEEcCCCC
Confidence 699999999999986 578999999853321 12233456889999999999999999999998776 89999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 445 GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 445 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 78 g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~ 143 (312)
T cd05585 78 GELFHHLQREG--RFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLN 143 (312)
T ss_pred CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccC
Confidence 99999996433 489999999999999999999998 9999999999999999999999999999864
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.3e-24 Score=217.60 Aligned_cols=146 Identities=17% Similarity=0.155 Sum_probs=126.3
Q ss_pred chhCcCCCeeEEEEEeCC--CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMKG--GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~--~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|+..+ +..||+|.+..... ......+.+.+|+.++..++||||+++++++.+.+ ..++||||
T Consensus 36 ~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~--~~~lv~Ey 112 (340)
T PTZ00426 36 RTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKI-IKQKQVDHVFSERKILNYINHPFCVNLYGSFKDES--YLYLVLEF 112 (340)
T ss_pred EEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHh-hhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCC--EEEEEEeC
Confidence 789999999999998753 36899998853321 11223456889999999999999999999998877 89999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+..
T Consensus 113 ~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 113 VIGGEFFTFLRRNK--RFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 99999999996443 489999999999999999999998 999999999999999999999999999987653
|
|
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.9e-24 Score=220.62 Aligned_cols=148 Identities=16% Similarity=0.113 Sum_probs=127.5
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceE
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
++|. +.||+|+||.||+++.. +++.+|+|.+.... .......+.+.+|+.+++.++||||+++++++.+.. ..+
T Consensus 43 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~--~~~ 119 (370)
T cd05621 43 EDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFE-MIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDK--YLY 119 (370)
T ss_pred HHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHH-hhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC--EEE
Confidence 4444 78999999999999987 57889999885322 112223456889999999999999999999998877 899
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 120 lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~ 193 (370)
T cd05621 120 MVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMD 193 (370)
T ss_pred EEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccceecc
Confidence 999999999999998633 378889999999999999999998 99999999999999999999999999998764
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.7e-24 Score=210.39 Aligned_cols=143 Identities=26% Similarity=0.336 Sum_probs=122.1
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhc--cCCCCccceeeEEecCCCC--ceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLAR--INHENTGKLLGYCRESSPF--TRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~g~~~~~~~~--~~~lv~ 439 (521)
+.||+|.||.||+|++++ ..||||++... +++.+.+|.++.+. +||+||+.+++.-..+++. +.|||+
T Consensus 217 e~IGkGRyGEVwrG~wrG-e~VAVKiF~sr-------dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvT 288 (513)
T KOG2052|consen 217 EIIGKGRFGEVWRGRWRG-EDVAVKIFSSR-------DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVT 288 (513)
T ss_pred EEecCccccceeeccccC-CceEEEEeccc-------chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEee
Confidence 789999999999999965 56999998543 23567788888765 4999999999886554422 689999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTE-----LGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-----~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
||.++|||+|||.+ ..++-...++++..+|.||++||.+ -+|.|.|||||+.|||+..++...|+|+|||-.
T Consensus 289 dYHe~GSL~DyL~r---~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~ 365 (513)
T KOG2052|consen 289 DYHEHGSLYDYLNR---NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 365 (513)
T ss_pred ecccCCcHHHHHhh---ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEE
Confidence 99999999999964 3489999999999999999999965 368999999999999999999999999999876
Q ss_pred ccc
Q 009965 515 LVS 517 (521)
Q Consensus 515 ~~~ 517 (521)
.++
T Consensus 366 h~~ 368 (513)
T KOG2052|consen 366 HDS 368 (513)
T ss_pred ecc
Confidence 543
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.9e-24 Score=210.49 Aligned_cols=162 Identities=20% Similarity=0.292 Sum_probs=132.2
Q ss_pred cccccCHHHHHHHHhhhhchhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceee
Q 009965 346 DVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425 (521)
Q Consensus 346 ~~~~~~~~~l~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g 425 (521)
+.+.++.+|++..+ ...|++|++|.||+|.+ +|+.||||.+...... .....+.|.+|+.++.+++|||||+++|
T Consensus 11 ~~~~i~~~~i~~~~---~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~~~g 85 (283)
T PHA02988 11 DIKCIESDDIDKYT---SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKG-HKVLIDITENEIKNLRRIDSNNILKIYG 85 (283)
T ss_pred cceecCHHHcCCCC---CeEEeeCCceEEEEEEE-CCEEEEEEeccccccc-cHHHHHHHHHHHHHHHhcCCCCEEEEee
Confidence 34456667764332 25799999999999998 6789999998543221 2223467889999999999999999999
Q ss_pred EEec--CCCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCC
Q 009965 426 YCRE--SSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503 (521)
Q Consensus 426 ~~~~--~~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~ 503 (521)
++.+ ......++||||+++|+|.++++.. ..++|..+.+++.+++.||+|||+.. +++||||||+|||+++++.
T Consensus 86 ~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~ 161 (283)
T PHA02988 86 FIIDIVDDLPRLSLILEYCTRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYK 161 (283)
T ss_pred eEEecccCCCceEEEEEeCCCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCc
Confidence 9976 3323678999999999999999754 35899999999999999999999732 6789999999999999999
Q ss_pred eeeCCCchhhhcc
Q 009965 504 PKVSPLCLSFLLV 516 (521)
Q Consensus 504 ~kl~DfGla~~~~ 516 (521)
+||+|||+++.+.
T Consensus 162 ~kl~dfg~~~~~~ 174 (283)
T PHA02988 162 LKIICHGLEKILS 174 (283)
T ss_pred EEEcccchHhhhc
Confidence 9999999998654
|
|
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.2e-24 Score=220.20 Aligned_cols=144 Identities=15% Similarity=0.088 Sum_probs=126.0
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. ++..||+|++..+... .....+.+.+|+.++.+++||||+++++++.+.+ ..++||||+
T Consensus 7 ~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~--~~~lv~E~~ 83 (381)
T cd05626 7 KTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVL-NRNQVAHVKAERDILAEADNEWVVKLYYSFQDKD--NLYFVMDYI 83 (381)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCC--EEEEEEecC
Confidence 67999999999999886 6789999998543211 2233457899999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
++|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+
T Consensus 84 ~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~ 151 (381)
T cd05626 84 PGGDMMSLLIRME--VFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGF 151 (381)
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCccc
Confidence 9999999996433 488999999999999999999998 9999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.5e-24 Score=213.72 Aligned_cols=143 Identities=20% Similarity=0.121 Sum_probs=123.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. ++..||+|.+..... ........+.+|++++..++||||+++.+++...+ ..++||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~-~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~--~~~lv~E~~ 77 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVI-VAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD--RLCFVMEYA 77 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCC--EEEEEEeCC
Confidence 36899999999999876 788999999854321 11223456788999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
++|+|.+++.... .+++.++..++.|++.||+|||+ . +|+||||||+|||+++++.+||+|||+++.
T Consensus 78 ~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~ 145 (325)
T cd05594 78 NGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKE 145 (325)
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCee
Confidence 9999999886433 58999999999999999999996 6 899999999999999999999999999875
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-24 Score=227.72 Aligned_cols=145 Identities=16% Similarity=0.262 Sum_probs=125.5
Q ss_pred chhCcCCCeeEEEEEeCCC-CEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCCccceeeE-Ee---cCC-CCceE
Q 009965 364 NIIGSSPDSLVYKGTMKGG-PEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGY-CR---ESS-PFTRM 436 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~-~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~-~~---~~~-~~~~~ 436 (521)
+.|.+|+|+.||.+....+ ..+|+|++.... ....+.+.+||++|++++ |+|||.+++. .. ..+ ..+.+
T Consensus 43 ~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~d----e~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Evl 118 (738)
T KOG1989|consen 43 KVLAEGGFAQVYLAQDVKGGKKYALKRMYVND----EEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVL 118 (738)
T ss_pred EEEccCCcEEEEEEEecCCCceeeeeeeecCC----HHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEE
Confidence 7899999999999999765 999999985542 345677899999999996 9999999993 22 122 23789
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhh
Q 009965 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSF 513 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~ 513 (521)
|.||||++|.|-+++..+....|++.++++|+.++++|+++||. ++|+|||||||.+||||+.++..||||||-|.
T Consensus 119 lLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~~g~~KLCDFGSat 194 (738)
T KOG1989|consen 119 LLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSADGNYKLCDFGSAT 194 (738)
T ss_pred eehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcCCCCEEeCcccccc
Confidence 99999999999999975554559999999999999999999998 68999999999999999999999999999775
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.7e-25 Score=220.94 Aligned_cols=158 Identities=23% Similarity=0.309 Sum_probs=136.4
Q ss_pred HHHHHHhhhhchhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC
Q 009965 354 ELEVACEDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432 (521)
Q Consensus 354 ~l~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 432 (521)
|+++......++||-|.||.||.|.|+ -.-.||||.++... -...+|++|..+|+.++|||+|+|+|+|....
T Consensus 263 EmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-----MeveEFLkEAAvMKeikHpNLVqLLGVCT~Ep- 336 (1157)
T KOG4278|consen 263 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEP- 336 (1157)
T ss_pred hccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc-----hhHHHHHHHHHHHHhhcCccHHHHhhhhccCC-
Confidence 344333334589999999999999997 46789999873221 23468999999999999999999999998776
Q ss_pred CceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchh
Q 009965 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512 (521)
Q Consensus 433 ~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla 512 (521)
..|||+|||.+|+|.+||++..+..++--..+.+|.||+.||+||... .+|||||.++|+|+.++..+||+||||+
T Consensus 337 -PFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLs 412 (1157)
T KOG4278|consen 337 -PFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLS 412 (1157)
T ss_pred -CeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchh
Confidence 579999999999999999977776778788899999999999999999 9999999999999999999999999999
Q ss_pred hhccccccC
Q 009965 513 FLLVSSIIC 521 (521)
Q Consensus 513 ~~~~~~~~~ 521 (521)
|+|....+|
T Consensus 413 RlMtgDTYT 421 (1157)
T KOG4278|consen 413 RLMTGDTYT 421 (1157)
T ss_pred hhhcCCcee
Confidence 999876654
|
|
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=4e-24 Score=214.50 Aligned_cols=144 Identities=17% Similarity=0.131 Sum_probs=123.4
Q ss_pred chhCcCCCeeEEEEEeC----CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||.||+++.. +++.||+|.+..............+.+|+.++..++||||+++++++..++ ..++||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~--~~~lv~ 79 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGG--KLYLIL 79 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCC--eEEEEE
Confidence 46999999999999863 578899999854321112223456789999999999999999999998876 789999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
||+++|+|.+++.... .+.+..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 80 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 149 (323)
T cd05584 80 EYLSGGELFMHLEREG--IFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKE 149 (323)
T ss_pred eCCCCchHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCee
Confidence 9999999999996433 478888999999999999999998 999999999999999999999999999874
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.9e-24 Score=214.83 Aligned_cols=145 Identities=16% Similarity=0.086 Sum_probs=127.0
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|++..... ......+.+.+|++++..++||||+++++++...+ ..++||||+
T Consensus 7 ~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~--~~~lv~e~~ 83 (333)
T cd05600 7 TQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLL-FKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDE--YLYLAMEYV 83 (333)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEEEHHHH-hhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCC--EEEEEEeCC
Confidence 78999999999999987 588999999854321 11223457889999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++...
T Consensus 84 ~g~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~ 152 (333)
T cd05600 84 PGGDFRTLLNNLG--VLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIV 152 (333)
T ss_pred CCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCcccc
Confidence 9999999996433 589999999999999999999998 99999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.7e-24 Score=207.81 Aligned_cols=145 Identities=29% Similarity=0.381 Sum_probs=124.1
Q ss_pred hchhCcCCCeeEEEEEeC-----CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEE
Q 009965 363 SNIIGSSPDSLVYKGTMK-----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~-----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
.+.||.|.||.||+|.+. .+..|+||.+... ......+.|.+|++.+.+++||||++++|+|...+ ..++
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~---~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~--~~~l 78 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS---SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENE--PLFL 78 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT---SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSS--SEEE
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc---cccccceeeeecccccccccccccccccccccccc--cccc
Confidence 367999999999999987 2467999988321 22334678999999999999999999999999665 6899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 438 v~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
|+||+++|+|.++++......++|.++.+|+.|||+||+|||+. +++|+||+++||++++++.+||+|||+++..
T Consensus 79 v~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~ 153 (259)
T PF07714_consen 79 VMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPI 153 (259)
T ss_dssp EEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEET
T ss_pred cccccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccc
Confidence 99999999999999876455799999999999999999999999 9999999999999999999999999999876
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.7e-24 Score=218.32 Aligned_cols=146 Identities=18% Similarity=0.243 Sum_probs=124.4
Q ss_pred hchhCcCCCeeEEEEEe------CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCce
Q 009965 363 SNIIGSSPDSLVYKGTM------KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~------~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 435 (521)
.+.||+|+||.||+|+. .++..||||++..... ....+.+.+|+.++..+ +||||++++++|...+ ..
T Consensus 40 ~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~--~~ 114 (375)
T cd05104 40 GKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH---LTEREALMSELKVLSYLGNHINIVNLLGACTVGG--PT 114 (375)
T ss_pred hheecCCccceEEEEEEeccccCccceeEEEEeccCCcC---cHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC--cc
Confidence 48999999999999974 2356899998843221 22345789999999999 8999999999998877 78
Q ss_pred EEEEecCCCCChhhhhccCC------------------------------------------------------------
Q 009965 436 MLVFDYASNGTLYEHLHYGE------------------------------------------------------------ 455 (521)
Q Consensus 436 ~lv~ey~~~gsL~~~l~~~~------------------------------------------------------------ 455 (521)
++||||+++|+|.++++...
T Consensus 115 ~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (375)
T cd05104 115 LVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSY 194 (375)
T ss_pred eeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccccee
Confidence 99999999999999986321
Q ss_pred -------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 456 -------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 456 -------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
...++|..+.+++.||++||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 265 (375)
T cd05104 195 IDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIR 265 (375)
T ss_pred cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceecc
Confidence 12478999999999999999999998 99999999999999999999999999997653
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.7e-24 Score=212.90 Aligned_cols=144 Identities=21% Similarity=0.158 Sum_probs=121.0
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHH-HHhccCCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVA-DLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||+||+|+.. +|+.||+|.+...... .....+++..|.. ++..++||||+++++++...+ ..++||||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~--~~~lv~e~ 77 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAIL-KKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTAD--KLYFVLDY 77 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHh-hhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCC--EEEEEEcC
Confidence 36899999999999986 6899999998543221 1122334555554 567899999999999998776 78999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 78 ~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~ 146 (323)
T cd05575 78 VNGGELFFHLQRER--SFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (323)
T ss_pred CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCccc
Confidence 99999999986433 588999999999999999999998 9999999999999999999999999998753
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.3e-24 Score=218.69 Aligned_cols=143 Identities=14% Similarity=0.076 Sum_probs=125.0
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.+|+|.+..... ......+.+.+|++++++++||||+++++.+.+.+ ..++||||+
T Consensus 7 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~--~~~lv~E~~ 83 (382)
T cd05625 7 KTLGIGAFGEVCLARKVDTKALYAMKTLRKKDV-LLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKD--NLYFVMDYI 83 (382)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHh-hhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCC--EEEEEEeCC
Confidence 78999999999999886 678999999854321 11233457889999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
++|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 84 ~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~ 150 (382)
T cd05625 84 PGGDMMSLLIRMG--IFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTG 150 (382)
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCcc
Confidence 9999999996433 478888899999999999999998 999999999999999999999999999864
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.9e-24 Score=218.57 Aligned_cols=149 Identities=17% Similarity=0.131 Sum_probs=127.1
Q ss_pred Hhhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCce
Q 009965 359 CEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 359 ~~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 435 (521)
.++|. +.||+|+||.||+++.. ++..+|+|.+.... .......+.+.+|+.+++.++||||+++++++.+.+ ..
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~--~~ 118 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFE-MIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDK--YL 118 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHH-hhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCC--EE
Confidence 34454 78999999999999986 68899999985322 111223345789999999999999999999998877 89
Q ss_pred EEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 436 ~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
++||||+++|+|.++++.. .++...+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~ 192 (370)
T cd05596 119 YMVMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 192 (370)
T ss_pred EEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeec
Confidence 9999999999999998643 377888899999999999999998 9999999999999999999999999999865
Q ss_pred c
Q 009965 516 V 516 (521)
Q Consensus 516 ~ 516 (521)
.
T Consensus 193 ~ 193 (370)
T cd05596 193 D 193 (370)
T ss_pred c
Confidence 4
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.2e-24 Score=211.23 Aligned_cols=143 Identities=22% Similarity=0.289 Sum_probs=123.0
Q ss_pred chhCcCCCeeEEEEEeC-CCC----EEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGP----EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~----~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||+|++. ++. .||+|.+... ......++|.+|+.+++.++||||++++|+|... ..++|
T Consensus 13 ~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~---~~~~v 86 (316)
T cd05108 13 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLI 86 (316)
T ss_pred eeeecCCCceEEEEEEecCCCccceeEEEEecccc---CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC---Cceee
Confidence 78999999999999875 333 3888887422 1223456799999999999999999999999865 46899
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+||+++|+|.++++... ..+++..+.+++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 87 ~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~ 160 (316)
T cd05108 87 TQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 160 (316)
T ss_pred eecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcccccccccc
Confidence 99999999999997433 3589999999999999999999998 99999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.1e-24 Score=206.19 Aligned_cols=144 Identities=25% Similarity=0.298 Sum_probs=124.8
Q ss_pred hchhCcCCCeeEEEEEeC----CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEE
Q 009965 363 SNIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
.+.||+|+||.||+|++. .+..||+|.+.... .......|.+|+.++.+++||||++++|++...+ ..++|
T Consensus 10 ~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv 84 (266)
T cd05064 10 ERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC---SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGN--TMMIV 84 (266)
T ss_pred eeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC---CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCC--CcEEE
Confidence 378999999999999864 35689999874321 2233467999999999999999999999998776 78999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
|||+++|+|.+++.... ..++|.++.+++.|++.||+|||+. +++||||||+||++++++.++++|||.+...
T Consensus 85 ~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~ 157 (266)
T cd05064 85 TEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQED 157 (266)
T ss_pred EEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCcccccc
Confidence 99999999999996433 3589999999999999999999998 9999999999999999999999999987643
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.4e-24 Score=212.00 Aligned_cols=143 Identities=20% Similarity=0.144 Sum_probs=120.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHH-HHhccCCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVA-DLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
++||+|+||.||+|+.. +++.||+|.+...... .......+..|.. ++..++||||+++++++.+.+ ..++||||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~--~~~lv~e~ 77 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTIL-KKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAE--KLYFVLDY 77 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHH-HhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCC--EEEEEEcC
Confidence 36999999999999986 6889999998543211 1222345555654 578899999999999998777 89999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
+++|+|.+++... ..+++.++..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 78 ~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 145 (321)
T cd05603 78 VNGGELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKE 145 (321)
T ss_pred CCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCcc
Confidence 9999999888643 3478888999999999999999998 999999999999999999999999999875
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.91 E-value=7e-24 Score=217.37 Aligned_cols=143 Identities=15% Similarity=0.072 Sum_probs=124.5
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. +++.||+|.+..... ......+.+.+|++++.+++||||+++++.+.+.+ ..++||||+
T Consensus 7 ~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~-~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~--~~~lv~E~~ 83 (376)
T cd05598 7 KTIGIGAFGEVCLVRKVDTNALYAMKTLRKADV-LMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKD--NLYFVMDYI 83 (376)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHH-HhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCC--EEEEEEeCC
Confidence 68999999999999986 688999998843221 11223456889999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
++|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+.
T Consensus 84 ~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~ 150 (376)
T cd05598 84 PGGDMMSLLIRLG--IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTG 150 (376)
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCcc
Confidence 9999999996433 478888899999999999999998 999999999999999999999999999864
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-23 Score=211.87 Aligned_cols=143 Identities=17% Similarity=0.111 Sum_probs=124.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
++||+|+||.||+++.. +++.||+|.+..... ......+.+.+|..++..+ +||||+++++++.+.+ ..++||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~--~~~lv~e~ 77 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELV-NDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTES--RLFFVIEF 77 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCC--EEEEEEeC
Confidence 36899999999999986 688999999854321 1122345688899999998 7999999999998877 79999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 78 ~~~g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~ 145 (329)
T cd05588 78 VSGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKE 145 (329)
T ss_pred CCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccc
Confidence 9999999988643 3589999999999999999999998 999999999999999999999999999874
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1e-23 Score=211.02 Aligned_cols=144 Identities=19% Similarity=0.148 Sum_probs=124.4
Q ss_pred chhCcCCCeeEEEEEe----CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTM----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||.||+++. .+|+.+|+|.+..... .......+.+|++++.+++||||+++++++.+.+ ..++||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~ 77 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATL--KVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEG--KLYLIL 77 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCC--EEEEEE
Confidence 4699999999999975 3578999999854321 1223446788999999999999999999998876 899999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
||+++|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 78 e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 149 (318)
T cd05582 78 DFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESI 149 (318)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccC
Confidence 999999999999643 3589999999999999999999998 99999999999999999999999999988653
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-23 Score=204.33 Aligned_cols=144 Identities=19% Similarity=0.254 Sum_probs=128.2
Q ss_pred hchhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
.+.||+|++|.||+|...++..||+|.+..... ..+++.+|+.++++++||||+++++++...+ ..++||||+
T Consensus 11 ~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 83 (261)
T cd05068 11 LRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM-----DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEE--PIYIVTELM 83 (261)
T ss_pred EEEecccCCccEEEEEecCCeEEEEEeeCCCcc-----cHHHHHHHHHHHHHCCCCCccceeEEEecCC--Ceeeeeecc
Confidence 488999999999999988888899998743221 2456899999999999999999999998776 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++.......++|.++.+++.+++.|+.|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 84 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~ 154 (261)
T cd05068 84 KYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIK 154 (261)
T ss_pred cCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEcc
Confidence 999999999755445689999999999999999999998 99999999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-24 Score=197.58 Aligned_cols=148 Identities=21% Similarity=0.300 Sum_probs=129.9
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeecccc----chhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW----TGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~----~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~l 437 (521)
+++|+|..+.|.++..+ +|.+.|+|++....... .....++-.+|+.+|+++ .||+|+++.++|+.+. ..++
T Consensus 23 eilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s--F~Fl 100 (411)
T KOG0599|consen 23 EILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA--FVFL 100 (411)
T ss_pred HHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc--hhhh
Confidence 78999999999999876 78899999986554211 223456678899999999 7999999999999888 8999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 438 v~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
|+|.|+.|.|.|+|.+. ..+++....+|++|+.+|++|||.. .||||||||+|||+|+++++||+|||+|..+.+
T Consensus 101 VFdl~prGELFDyLts~--VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDFGFa~~l~~ 175 (411)
T KOG0599|consen 101 VFDLMPRGELFDYLTSK--VTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDFGFACQLEP 175 (411)
T ss_pred hhhhcccchHHHHhhhh--eeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEeccceeeccCC
Confidence 99999999999999643 3589999999999999999999999 999999999999999999999999999998775
Q ss_pred c
Q 009965 518 S 518 (521)
Q Consensus 518 ~ 518 (521)
+
T Consensus 176 G 176 (411)
T KOG0599|consen 176 G 176 (411)
T ss_pred c
Confidence 4
|
|
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-24 Score=218.85 Aligned_cols=154 Identities=23% Similarity=0.270 Sum_probs=131.8
Q ss_pred hhchhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEe
Q 009965 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 362 ~~~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
|..+||+|+|-+||||.+. +|.+||.--+............++|..|+++|+.|+|||||+++.++.+......-+|+|
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE 123 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE 123 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence 4589999999999999886 688888655543333334455688999999999999999999999998877556889999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeec-CCCCeeeCCCchhhhcccc
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT-EDFSPKVSPLCLSFLLVSS 518 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld-~~~~~kl~DfGla~~~~~~ 518 (521)
.|..|+|+.|+++..+ ++......+++||.+||.|||++ .|||||||||..||+|+ ..|.+||+|+|||+++..+
T Consensus 124 L~TSGtLr~Y~kk~~~--vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s 199 (632)
T KOG0584|consen 124 LFTSGTLREYRKKHRR--VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS 199 (632)
T ss_pred cccCCcHHHHHHHhcc--CCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhcc
Confidence 9999999999975443 78889999999999999999996 78999999999999997 5689999999999987643
|
|
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-23 Score=211.17 Aligned_cols=143 Identities=20% Similarity=0.157 Sum_probs=121.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHH-HHhccCCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVA-DLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||+||+|+.. +|+.+|+|.+..+... ......++..|.. +++.++||||+++++++...+ ..++||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~--~~~lv~e~ 77 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVL-NRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTE--KLYFVLDF 77 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCC--EEEEEEcC
Confidence 36899999999999886 6899999998543211 1223345566655 467789999999999998877 89999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
+++|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 78 ~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~ 145 (325)
T cd05604 78 VNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKE 145 (325)
T ss_pred CCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCccc
Confidence 9999999988643 3589999999999999999999998 999999999999999999999999999875
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-23 Score=211.39 Aligned_cols=144 Identities=17% Similarity=0.129 Sum_probs=123.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
++||+|+||.||+++.. +++.+|+|.+...... .....+.+.+|+.++.++ +||||+++++++...+ ..++||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~--~~~lv~E~ 77 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVN-DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES--RLFFVIEY 77 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhc-chhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCC--EEEEEEeC
Confidence 36899999999999986 6789999998543211 123345678899888877 8999999999998877 89999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 78 ~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~ 146 (329)
T cd05618 78 VNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 146 (329)
T ss_pred CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccc
Confidence 99999999886433 589999999999999999999998 9999999999999999999999999998753
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-23 Score=213.47 Aligned_cols=139 Identities=19% Similarity=0.247 Sum_probs=121.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||||.+.... .....+.+.+|++++++++|+||+++++++...+ ..++||||+
T Consensus 80 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 154 (353)
T PLN00034 80 NRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH---EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNG--EIQVLLEFM 154 (353)
T ss_pred hhccCCCCeEEEEEEECCCCCEEEEEEEecCC---cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCC--eEEEEEecC
Confidence 68999999999999986 68999999984322 2234567899999999999999999999998776 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+.. ..++..+..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 155 ~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~ 219 (353)
T PLN00034 155 DGGSLEGTH------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILA 219 (353)
T ss_pred CCCcccccc------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceecc
Confidence 999987643 256778889999999999999998 99999999999999999999999999998754
|
|
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-23 Score=207.39 Aligned_cols=142 Identities=21% Similarity=0.250 Sum_probs=123.0
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. ++..||+|.+...... .....+.+|+.++++++||||+++++++.... ..++||||+
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e~~ 85 (288)
T cd07871 11 DKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE---GAPCTAIREVSLLKNLKHANIVTLHDIIHTER--CLTLVFEYL 85 (288)
T ss_pred eEEecCCCEEEEEEEECCCCCEEEEEEecccccC---CcchhHHHHHHHHHhCCCCCEeeEEEEEcCCC--eEEEEEeCC
Confidence 68999999999999886 6889999988543211 22346789999999999999999999998776 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
++ +|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 86 ~~-~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~ 153 (288)
T cd07871 86 DS-DLKQYLDNCG-NLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAK 153 (288)
T ss_pred Cc-CHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeec
Confidence 85 9999886332 3578999999999999999999998 9999999999999999999999999998754
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.7e-23 Score=203.13 Aligned_cols=144 Identities=17% Similarity=0.302 Sum_probs=128.1
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|...++..||+|.+.... ...+.+.+|+.++++++|+||+++++++...+ ..+++|||++
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~ 84 (261)
T cd05072 12 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-----MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEE--PIYIITEYMA 84 (261)
T ss_pred eecCCcCCceEEEEEecCCceEEEEEccCCc-----hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC--CcEEEEecCC
Confidence 7899999999999998888889999874321 12457899999999999999999999998776 7899999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
+|+|.++++......+++.++..++.++++||+|||+. +++||||||+||++++++.++|+|||+++.+..
T Consensus 85 ~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05072 85 KGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIED 155 (261)
T ss_pred CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCC
Confidence 99999999755555689999999999999999999998 999999999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-23 Score=207.02 Aligned_cols=147 Identities=19% Similarity=0.128 Sum_probs=127.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
++||+|+||.||++... +++.||+|.+...... .......+.+|+.++++++||||+++++++.+.+ ..++||||+
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 82 (285)
T cd05605 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-KRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD--ALCLVLTLM 82 (285)
T ss_pred EEEecCCCeEEEEEEEcCCCceEEEEEEehhhhh-hhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCC--eEEEEEecc
Confidence 68999999999999886 6889999998543211 1223456788999999999999999999998776 799999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.......+++..+..++.|++.||.|||+. +++||||||+||++++++.++|+|||+++.+.
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 153 (285)
T cd05605 83 NGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIP 153 (285)
T ss_pred CCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecC
Confidence 999999988654445689999999999999999999998 99999999999999999999999999988653
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.1e-23 Score=201.30 Aligned_cols=144 Identities=21% Similarity=0.283 Sum_probs=125.9
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.+|+|.+... ........|.+|++++++++||||++++++|.... ..++|+||+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 75 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRET---LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ--PIYIVMELV 75 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCcc---CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCC--CeEEEEeec
Confidence 36899999999999986 7889999986422 12234567999999999999999999999998876 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++++|.++++... ..++|.++..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 76 ~~~~L~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 145 (252)
T cd05084 76 QGGDFLTFLRTEG-PRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEE 145 (252)
T ss_pred cCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccc
Confidence 9999999996433 3589999999999999999999998 99999999999999999999999999987644
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-23 Score=214.30 Aligned_cols=145 Identities=14% Similarity=0.088 Sum_probs=126.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. +++.||+|.+.... .......+.+.+|+.++..++||||+++++.+.+.+ ..++||||+
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~--~~~lv~E~~ 83 (360)
T cd05627 7 KVIGRGAFGEVRLVQKKDTGHIYAMKILRKAD-MLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKR--NLYLIMEFL 83 (360)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHH-HhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC--EEEEEEeCC
Confidence 78999999999999986 68899999985322 112233457889999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 84 ~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~ 152 (360)
T cd05627 84 PGGDMMTLLMKKD--TLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLK 152 (360)
T ss_pred CCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCcccc
Confidence 9999999996443 489999999999999999999998 99999999999999999999999999988653
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-23 Score=204.71 Aligned_cols=145 Identities=19% Similarity=0.122 Sum_probs=125.1
Q ss_pred hCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCCC
Q 009965 366 IGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASN 444 (521)
Q Consensus 366 ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~~ 444 (521)
||+|+||.||+++.. +|+.+|+|.+..+... .....+.+..|++++.+++||||+++.+++.+.. ..++||||+++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~-~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~--~~~lv~e~~~g 77 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLK-KKSGEKMALLEKEILEKVNSPFIVNLAYAFESKT--HLCLVMSLMNG 77 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhh-cchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCC--eEEEEEecCCC
Confidence 699999999999886 6899999998543211 1122345667999999999999999999998776 79999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 445 GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 445 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||++++++.++|+|||++..+.
T Consensus 78 ~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~ 146 (277)
T cd05607 78 GDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELK 146 (277)
T ss_pred CCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecC
Confidence 9999988755555689999999999999999999998 99999999999999999999999999987654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.3e-23 Score=201.69 Aligned_cols=141 Identities=18% Similarity=0.296 Sum_probs=125.3
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||++++.++..+|+|.+.... ...++|.+|+.++++++||||+++++++.... ..++||||++
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~iv~e~~~ 82 (256)
T cd05114 10 KELGSGQFGVVHLGKWRAQIKVAIKAINEGA-----MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQK--PLYIVTEFME 82 (256)
T ss_pred eEecCCcCceEEEEEeccCceEEEEecccCC-----ccHHHHHHHHHHHHHCCCCCceeEEEEEccCC--CEEEEEEcCC
Confidence 7899999999999999888889999874221 12357899999999999999999999998776 7899999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
+|+|.++++... ..++|..+..++.+++.||+|||+. +++||||||+||++++++.+||+|||+++..
T Consensus 83 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~ 150 (256)
T cd05114 83 NGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYV 150 (256)
T ss_pred CCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCcccc
Confidence 999999997433 2589999999999999999999998 9999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-23 Score=215.31 Aligned_cols=154 Identities=16% Similarity=0.129 Sum_probs=130.1
Q ss_pred HHHHHHhhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecC
Q 009965 354 ELEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430 (521)
Q Consensus 354 ~l~~~~~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 430 (521)
++....++|. +.||+|+||.||+++.. +++.+|+|.+..... ......+.+.+|+.+++.++||||+++++++.+.
T Consensus 37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~ 115 (371)
T cd05622 37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEM-IKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 115 (371)
T ss_pred hcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHh-hhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence 3444445665 78999999999999987 678899998853221 1122345678999999999999999999999877
Q ss_pred CCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCc
Q 009965 431 SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLC 510 (521)
Q Consensus 431 ~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfG 510 (521)
. ..++||||+++|+|.+++... .++...+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||
T Consensus 116 ~--~~~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG 187 (371)
T cd05622 116 R--YLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFG 187 (371)
T ss_pred C--EEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCC
Confidence 6 899999999999999998633 378888899999999999999999 99999999999999999999999999
Q ss_pred hhhhcc
Q 009965 511 LSFLLV 516 (521)
Q Consensus 511 la~~~~ 516 (521)
+++.+.
T Consensus 188 ~a~~~~ 193 (371)
T cd05622 188 TCMKMN 193 (371)
T ss_pred ceeEcC
Confidence 998654
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-23 Score=211.23 Aligned_cols=146 Identities=14% Similarity=0.084 Sum_probs=127.6
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. +++.||+|.+..... ......+.+.+|+.++..++||||+++++++.+.+ ..++||||+
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~--~~~lv~e~~ 83 (330)
T cd05601 7 SLVGRGHFGEVQVVREKATGDIYAMKVMKKSVL-LAQETVSFFEEERDILSISNSPWIPQLQYAFQDKD--NLYLVMEYQ 83 (330)
T ss_pred EEEEeccCEEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCC--eEEEEECCC
Confidence 78999999999999986 688999999854321 12234567889999999999999999999998776 799999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 84 ~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 153 (330)
T cd05601 84 PGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLT 153 (330)
T ss_pred CCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECC
Confidence 999999999643 23589999999999999999999999 99999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.7e-23 Score=205.54 Aligned_cols=145 Identities=21% Similarity=0.115 Sum_probs=123.9
Q ss_pred hCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCCC
Q 009965 366 IGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASN 444 (521)
Q Consensus 366 ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~~ 444 (521)
||+|+||+||++... +++.+|+|.+...... .....+.+..|++++++++||||+++.+++.... ..++||||+++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~--~~~lv~e~~~~ 77 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLK-KRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKT--DLCLVMTIMNG 77 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHh-hhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCC--eEEEEEeCCCC
Confidence 699999999999886 6889999998543211 1122356788999999999999999999988776 78999999999
Q ss_pred CChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 445 GTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 445 gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 78 g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 148 (280)
T cd05608 78 GDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELK 148 (280)
T ss_pred CCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecC
Confidence 9999887532 234589999999999999999999998 99999999999999999999999999997653
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-23 Score=209.87 Aligned_cols=144 Identities=15% Similarity=0.090 Sum_probs=123.2
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
++||+|+||.||+|+.. +++.||+|.+...... .....+.+..|.+++..+ +||||+++++++...+ ..++||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~--~~~lv~E~ 77 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVIL-QDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKD--RLFFVMEY 77 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhh-hhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC--eEEEEEeC
Confidence 36999999999999986 5789999998543211 122345677899998876 8999999999998877 79999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 78 ~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~ 146 (321)
T cd05591 78 VNGGDLMFQIQRSR--KFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEG 146 (321)
T ss_pred CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceec
Confidence 99999999886433 489999999999999999999998 9999999999999999999999999998753
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.2e-23 Score=203.37 Aligned_cols=143 Identities=27% Similarity=0.317 Sum_probs=120.3
Q ss_pred hhCcCCCeeEEEEEeCCC---CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEec
Q 009965 365 IIGSSPDSLVYKGTMKGG---PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 365 ~ig~G~~g~Vy~~~~~~~---~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
.||+|+||.||+|...++ ..+++|.+... ........|.+|+.+++.++||||+++++++.... ..++||||
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~--~~~lv~e~ 76 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRAS---ATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESI--PYLLVLEF 76 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCcc---CChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCC--ceEEEEEe
Confidence 589999999999976533 45777765322 12234467899999999999999999999998776 78999999
Q ss_pred CCCCChhhhhccCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 442 ASNGTLYEHLHYGE---RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 442 ~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
+++|+|.+++.... ....++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~ 150 (269)
T cd05042 77 CPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQ 150 (269)
T ss_pred CCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEecccccccc
Confidence 99999999996432 22357888899999999999999998 9999999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.3e-23 Score=202.16 Aligned_cols=145 Identities=21% Similarity=0.304 Sum_probs=129.7
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|...++..+++|.+.... .....++.+|+.++..++||||+++++++.+.. ..++||||++
T Consensus 12 ~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~e~~~ 85 (261)
T cd05148 12 RKLGSGYFGEVWEGLWKNRVRVAIKILKSDD----LLKQQDFQKEVQALKRLRHKHLISLFAVCSVGE--PVYIITELME 85 (261)
T ss_pred hhhccCCCccEEEeEecCCCcEEEEeccccc----hhhHHHHHHHHHHHhcCCCcchhheeeeEecCC--CeEEEEeecc
Confidence 7899999999999999888999999975432 123456889999999999999999999998877 7899999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
+|+|.++++......+++.++.+++.+++.||+|||+. +++||||||+||++++++.+||+|||+++.+..
T Consensus 86 ~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~ 156 (261)
T cd05148 86 KGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKE 156 (261)
T ss_pred cCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCC
Confidence 99999999765556789999999999999999999998 999999999999999999999999999987643
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-23 Score=215.57 Aligned_cols=146 Identities=18% Similarity=0.261 Sum_probs=123.7
Q ss_pred hchhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCce
Q 009965 363 SNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 435 (521)
.+.||+|+||.||+|+.. ++..||+|++..... ......+.+|+.+++.+ +|+|||+++++|.... ..
T Consensus 43 ~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~--~~ 117 (374)
T cd05106 43 GKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH---TDEREALMSELKILSHLGQHKNIVNLLGACTHGG--PV 117 (374)
T ss_pred hheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC---HHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC--Ce
Confidence 378999999999999752 235799999853321 22345688999999999 8999999999998877 78
Q ss_pred EEEEecCCCCChhhhhccCC------------------------------------------------------------
Q 009965 436 MLVFDYASNGTLYEHLHYGE------------------------------------------------------------ 455 (521)
Q Consensus 436 ~lv~ey~~~gsL~~~l~~~~------------------------------------------------------------ 455 (521)
++||||+++|+|.++++...
T Consensus 118 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (374)
T cd05106 118 LVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDS 197 (374)
T ss_pred EEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccc
Confidence 99999999999999985321
Q ss_pred --------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 456 --------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 456 --------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
..++++.++.+|+.||++||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 198 ~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~ 263 (374)
T cd05106 198 KDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIM 263 (374)
T ss_pred cchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeecc
Confidence 12478999999999999999999998 99999999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-23 Score=209.79 Aligned_cols=144 Identities=21% Similarity=0.133 Sum_probs=119.6
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHH-HHhccCCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVA-DLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||+||+|+.. +++.+|+|.+..+... .......+..|.. ++..++||||+++++++...+ ..++||||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~--~~~lv~e~ 77 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAIL-KKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD--KLYFVLDY 77 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHH-hhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCC--eEEEEEeC
Confidence 36899999999999987 6788999998543211 1122334444544 567889999999999998877 79999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
+++|+|.+++.... .+.+.....++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 78 ~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~ 146 (325)
T cd05602 78 INGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKEN 146 (325)
T ss_pred CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCccc
Confidence 99999999996433 477888888999999999999998 9999999999999999999999999998753
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.3e-23 Score=208.60 Aligned_cols=144 Identities=17% Similarity=0.184 Sum_probs=126.0
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. ++..+|+|.+.... .....+++.+|++++.+++||||+++++++...+ ..++||||+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 85 (331)
T cd06649 11 SELGAGNGGVVTKVQHKPSGLIMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG--EISICMEHM 85 (331)
T ss_pred EeecCCCCEEEEEEEECCCCcEEEEEEeeccc---CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC--EEEEEeecC
Confidence 68999999999999987 67889999875432 2234567999999999999999999999998877 799999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.... .+++..+..++.+++.||+|||+.. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 86 ~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 155 (331)
T cd06649 86 DGGSLDQVLKEAK--RIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 155 (331)
T ss_pred CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccccccc
Confidence 9999999996433 4899999999999999999999851 69999999999999999999999999987653
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.6e-24 Score=218.41 Aligned_cols=149 Identities=21% Similarity=0.240 Sum_probs=127.3
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCC----CCceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----PFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~~~~lv 438 (521)
+.+|+|+||.||+|+.+ +|+.||||.+.... ....++...+|++++++++|+|||++++.-.+.. .....+|
T Consensus 19 e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~---~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlv 95 (732)
T KOG4250|consen 19 ERLGKGAFGNVYRGRNKETGRLVAVKTFNKES---SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLV 95 (732)
T ss_pred hhhcCCccceeeeecccccccchhHHhhhhhc---ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEE
Confidence 68999999999999976 79999999985433 1233567889999999999999999999876554 3468999
Q ss_pred EecCCCCChhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee--cCCC--CeeeCCCchhh
Q 009965 439 FDYASNGTLYEHLHYG-ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL--TEDF--SPKVSPLCLSF 513 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLl--d~~~--~~kl~DfGla~ 513 (521)
||||.+|||+..|.+. ....|++.+.+.+..+++.||.|||+. +|+||||||.||++ .++| --||+|||.||
T Consensus 96 mEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Ar 172 (732)
T KOG4250|consen 96 MEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAR 172 (732)
T ss_pred EeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeecccccc
Confidence 9999999999999743 345799999999999999999999998 99999999999998 3444 46999999999
Q ss_pred hcccc
Q 009965 514 LLVSS 518 (521)
Q Consensus 514 ~~~~~ 518 (521)
-+++.
T Consensus 173 el~d~ 177 (732)
T KOG4250|consen 173 ELDDN 177 (732)
T ss_pred cCCCC
Confidence 88764
|
|
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-23 Score=210.96 Aligned_cols=146 Identities=16% Similarity=0.114 Sum_probs=126.5
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. +++.||+|.+.... .......+.+.+|+.++..++|+||+++++++.+.+ ..++||||+
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv~e~~ 83 (331)
T cd05597 7 KVIGRGAFGEVAVVKMKNTGQVYAMKILNKWE-MLKRAETACFREERDVLVNGDRRWITNLHYAFQDEN--NLYLVMDYY 83 (331)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHH-HhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCC--eEEEEEecC
Confidence 78999999999999986 68899999985321 112233456889999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++... ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 84 ~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 153 (331)
T cd05597 84 VGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLL 153 (331)
T ss_pred CCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecC
Confidence 999999999642 23588999999999999999999999 99999999999999999999999999987543
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.5e-23 Score=203.55 Aligned_cols=145 Identities=20% Similarity=0.279 Sum_probs=124.8
Q ss_pred chhCcCCCeeEEEEEeC-----CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||++... ++..||+|++.... ....+.|.+|++++.+++||||+++++++...+....++|
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 85 (284)
T cd05081 10 QQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST----AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLV 85 (284)
T ss_pred eeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC----HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEE
Confidence 68999999999999853 47789999874321 2334678999999999999999999998865443368999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+||+++|+|.+++.... ..++|..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 86 ~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 86 MEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTKVLP 159 (284)
T ss_pred EEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCccccccc
Confidence 99999999999996432 3589999999999999999999998 99999999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-23 Score=210.97 Aligned_cols=146 Identities=16% Similarity=0.080 Sum_probs=126.3
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. +++.||+|.+.... .......+.+.+|..++..++|+||+++++++.+.+ ..++||||+
T Consensus 7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~--~~~lv~Ey~ 83 (331)
T cd05624 7 KVIGRGAFGEVAVVKMKHTERIYAMKILNKWE-MLKRAETACFREERNVLVNGDCQWITTLHYAFQDEN--YLYLVMDYY 83 (331)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEeHHH-HHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC--EEEEEEeCC
Confidence 78999999999999987 67889999885322 112233456888999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 84 ~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 153 (331)
T cd05624 84 VGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMN 153 (331)
T ss_pred CCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeecc
Confidence 9999999997422 3588999999999999999999998 99999999999999999999999999987654
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-23 Score=213.51 Aligned_cols=146 Identities=16% Similarity=0.099 Sum_probs=128.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +++.||+|++...... .....+.+.+|++++..++||||+++++++.+.+ ..++||||+
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv~e~~ 83 (350)
T cd05573 7 KVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMI-KRNQIAHVRAERDILADADSPWIVKLYYSFQDEE--HLYLVMEYM 83 (350)
T ss_pred EEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHh-hccHHHHHHHHHHHHHhcCCCCccchhhheecCC--eEEEEEcCC
Confidence 78999999999999987 6899999998543211 1233457899999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+..
T Consensus 84 ~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 153 (350)
T cd05573 84 PGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNK 153 (350)
T ss_pred CCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence 999999999754 3589999999999999999999998 999999999999999999999999999987654
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-23 Score=209.45 Aligned_cols=144 Identities=17% Similarity=0.138 Sum_probs=123.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
++||+|+||.||+|+.. +++.||+|.+...... .....+.+..|..++..+ +||||+++++++...+ ..++||||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~--~~~iv~Ey 77 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVIL-QDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPD--RLFFVMEF 77 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHh-hccHHHHHHHHHHHHHhccCCCchhceeeEEEcCC--EEEEEEcC
Confidence 36899999999999986 6889999998533211 122345677888888877 7999999999998877 79999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 78 ~~~g~L~~~i~~~~--~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~ 146 (320)
T cd05590 78 VNGGDLMFHIQKSR--RFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 146 (320)
T ss_pred CCCchHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeec
Confidence 99999999986443 489999999999999999999998 9999999999999999999999999998753
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-23 Score=210.31 Aligned_cols=145 Identities=16% Similarity=0.091 Sum_probs=124.2
Q ss_pred chhCcCCCeeEEEEEeC----CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||+++.. +++.||+|.+............+.+..|+.++.++ +||||+++++++...+ ..++|
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~--~~~lv 83 (332)
T cd05614 6 KVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEA--KLHLI 83 (332)
T ss_pred EEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCC--EEEEE
Confidence 68999999999999763 57899999985332211222345688899999999 5999999999998776 78999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
|||+++|+|.+++..+. .+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+
T Consensus 84 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~ 155 (332)
T cd05614 84 LDYVSGGEMFTHLYQRD--NFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (332)
T ss_pred EeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence 99999999999996433 489999999999999999999998 9999999999999999999999999999864
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.9e-23 Score=208.18 Aligned_cols=144 Identities=17% Similarity=0.197 Sum_probs=125.5
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||++... ++..+|+|.+.... .......+.+|++++.+++||||++++++|.+.+ ..++||||+
T Consensus 11 ~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 85 (333)
T cd06650 11 SELGAGNGGVVFKVSHKPSGLIMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG--EISICMEHM 85 (333)
T ss_pred ccccCCCCEEEEEEEECCCCcEEEEEEeeccc---CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECC--EEEEEEecC
Confidence 78999999999999987 67888888875432 1233467899999999999999999999999877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.... .+++.....++.+++.||+|||+.. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 86 ~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~ 155 (333)
T cd06650 86 DGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 155 (333)
T ss_pred CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhh
Confidence 9999999996433 4889999999999999999999741 69999999999999999999999999998653
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.4e-23 Score=208.19 Aligned_cols=144 Identities=18% Similarity=0.149 Sum_probs=121.0
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
++||+|+||.||+|+.. +++.||+|.+...... .....+.+..|..++... +||||+++++++...+ ..++||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~--~~~lv~e~ 77 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVL-EDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKE--HLFFVMEY 77 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCC--EEEEEEcC
Confidence 36999999999999986 5788999998543211 112234456677777654 8999999999998776 89999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
+++|+|.+++.... .+++.+...++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 78 ~~gg~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~ 146 (316)
T cd05592 78 LNGGDLMFHIQSSG--RFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKEN 146 (316)
T ss_pred CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeEC
Confidence 99999999986433 488999999999999999999998 9999999999999999999999999998754
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.8e-23 Score=201.96 Aligned_cols=145 Identities=23% Similarity=0.327 Sum_probs=127.9
Q ss_pred hchhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEec
Q 009965 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
.+.||+|+||.||+|... .+..||+|.+.... ...+++.+|++++.+++||||+++++++...+ ..++||||
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 83 (263)
T cd05052 11 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--PFYIITEF 83 (263)
T ss_pred eeecCCcccceEEEEEEecCCceEEEEEecCCc-----hHHHHHHHHHHHHHhCCCCChhheEEEEcCCC--CcEEEEEe
Confidence 378999999999999986 57889999874221 22456899999999999999999999998876 78999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
+++|+|.+++.......++|..+..++.|+++||+|||+. +++||||||+||++++++.+||+|||+++.+..
T Consensus 84 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~ 156 (263)
T cd05052 84 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 156 (263)
T ss_pred CCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCcccccccc
Confidence 9999999999755555689999999999999999999998 999999999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.7e-24 Score=212.15 Aligned_cols=145 Identities=22% Similarity=0.359 Sum_probs=125.4
Q ss_pred cCHHHHHHHHhhhhchhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEec
Q 009965 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRE 429 (521)
Q Consensus 350 ~~~~~l~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~ 429 (521)
+.+++|.+. +.+|.|+-|.||+|++++ +.||||++... -..+|+-|++++||||+.+.|+|..
T Consensus 121 iPFe~IsEL-----eWlGSGaQGAVF~Grl~n-etVAVKKV~el-----------kETdIKHLRkLkH~NII~FkGVCtq 183 (904)
T KOG4721|consen 121 IPFEEISEL-----EWLGSGAQGAVFLGRLHN-ETVAVKKVREL-----------KETDIKHLRKLKHPNIITFKGVCTQ 183 (904)
T ss_pred CCHHHhhhh-----hhhccCcccceeeeeccC-ceehhHHHhhh-----------hhhhHHHHHhccCcceeeEeeeecC
Confidence 455666554 679999999999999966 67999987311 1357888999999999999999987
Q ss_pred CCCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCC
Q 009965 430 SSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPL 509 (521)
Q Consensus 430 ~~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~Df 509 (521)
.. ..+||||||+.|.|.+.|+ .+++++....+.+..+||.||.|||.. .|||||||+-||||..+..+||+||
T Consensus 184 sP--cyCIiMEfCa~GqL~~VLk--a~~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDF 256 (904)
T KOG4721|consen 184 SP--CYCIIMEFCAQGQLYEVLK--AGRPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDF 256 (904)
T ss_pred Cc--eeEEeeeccccccHHHHHh--ccCccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccc
Confidence 76 7899999999999999995 444688888999999999999999999 9999999999999999999999999
Q ss_pred chhhhcccc
Q 009965 510 CLSFLLVSS 518 (521)
Q Consensus 510 Gla~~~~~~ 518 (521)
|-++.+.+.
T Consensus 257 GTS~e~~~~ 265 (904)
T KOG4721|consen 257 GTSKELSDK 265 (904)
T ss_pred cchHhhhhh
Confidence 999876543
|
|
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.2e-23 Score=214.49 Aligned_cols=144 Identities=22% Similarity=0.287 Sum_probs=123.0
Q ss_pred chhCcCCCeeEEEEEeCC------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCCccceeeEEecCCCCceE
Q 009965 364 NIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~ 436 (521)
++||+|+||.||+|+... +..||||++..... ....+.|.+|++++.+++ ||||++++++|.+.. ..+
T Consensus 43 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~--~~~ 117 (400)
T cd05105 43 RILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTAR---SSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG--PIY 117 (400)
T ss_pred heecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCC---hHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC--ceE
Confidence 789999999999998632 34699998843321 233467999999999995 999999999998776 799
Q ss_pred EEEecCCCCChhhhhccCC-------------------------------------------------------------
Q 009965 437 LVFDYASNGTLYEHLHYGE------------------------------------------------------------- 455 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~------------------------------------------------------------- 455 (521)
+||||+++|+|.++++...
T Consensus 118 lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (400)
T cd05105 118 IITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEA 197 (400)
T ss_pred EEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhh
Confidence 9999999999999886321
Q ss_pred ---------------------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCC
Q 009965 456 ---------------------------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF 502 (521)
Q Consensus 456 ---------------------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~ 502 (521)
...++|.++.+++.|+++||+|||+. +|+||||||+|||+++++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill~~~~ 274 (400)
T cd05105 198 SKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLLAQGK 274 (400)
T ss_pred hhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEEeCCC
Confidence 12478999999999999999999998 999999999999999999
Q ss_pred CeeeCCCchhhhc
Q 009965 503 SPKVSPLCLSFLL 515 (521)
Q Consensus 503 ~~kl~DfGla~~~ 515 (521)
.+||+|||+++.+
T Consensus 275 ~~kL~DfGla~~~ 287 (400)
T cd05105 275 IVKICDFGLARDI 287 (400)
T ss_pred EEEEEeCCcceec
Confidence 9999999999865
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.8e-24 Score=211.42 Aligned_cols=142 Identities=19% Similarity=0.267 Sum_probs=126.2
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
..||+|..|.||.++-. +++.||||++...... .++-+.+|+.+|+..+|+|||.++..|...+ +.|+|||||
T Consensus 279 ~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~----~keLilnEi~Vm~~~~H~NiVnfl~Sylv~d--eLWVVMEym 352 (550)
T KOG0578|consen 279 KKIGQGATGGVYVARKISTKQEVAIKRMDLRKQP----KKELLLNEILVMRDLHHPNIVNFLDSYLVGD--ELWVVMEYM 352 (550)
T ss_pred hhhccccccceeeeeeccCCceEEEEEEEeccCC----chhhhHHHHHHHHhccchHHHHHHHHhcccc--eeEEEEeec
Confidence 58999999999999775 7889999999655332 2334789999999999999999999988776 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+.+... .+++.++..|++++++||+|||.. +|+|||||..|||++.++.+||+|||++..+..
T Consensus 353 ~ggsLTDvVt~~---~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~ 421 (550)
T KOG0578|consen 353 EGGSLTDVVTKT---RMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISE 421 (550)
T ss_pred CCCchhhhhhcc---cccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeecccc
Confidence 999999998532 389999999999999999999999 999999999999999999999999999987764
|
|
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.90 E-value=4e-23 Score=201.54 Aligned_cols=142 Identities=23% Similarity=0.252 Sum_probs=118.5
Q ss_pred hhCcCCCeeEEEEEeCCCC---EEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEec
Q 009965 365 IIGSSPDSLVYKGTMKGGP---EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 365 ~ig~G~~g~Vy~~~~~~~~---~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
.||+|+||.||+|+..++. .+++|.+... ......+.|.+|+.+++.++||||++++++|.... ..++||||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 76 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKAN---ASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAI--PYLLVFEY 76 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCC---CChHHHHHHHHHHHHHhccCCcchhheEEEecCCC--ccEEEEec
Confidence 6999999999999865443 3445554221 12234568999999999999999999999998776 78999999
Q ss_pred CCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 442 ASNGTLYEHLHYGE--RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 442 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
+++|+|.++++... ....++.....++.|+++||+|||+. +++||||||+|||+++++.+||+|||+++.
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~ 148 (268)
T cd05086 77 CELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPS 148 (268)
T ss_pred CCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccc
Confidence 99999999997432 23467778889999999999999998 999999999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.8e-23 Score=197.99 Aligned_cols=144 Identities=22% Similarity=0.308 Sum_probs=126.2
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
++||+|+||.||+|...++..+|+|.+.... .......|.+|+.++.+++||||+++++++.... ..++||||++
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~ 75 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDL---PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQ--PIYIVMELVP 75 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcC---CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCC--ccEEEEECCC
Confidence 3689999999999998888999999874322 2233457899999999999999999999998876 7899999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+|+|.+++.... ..++|..+..++.+++.||.|+|+. +++||||||+||++++++.+||+|||+++...
T Consensus 76 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 144 (250)
T cd05085 76 GGDFLSFLRKKK-DELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQED 144 (250)
T ss_pred CCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceecc
Confidence 999999986433 3589999999999999999999998 99999999999999999999999999987543
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=6e-23 Score=199.91 Aligned_cols=145 Identities=24% Similarity=0.354 Sum_probs=126.5
Q ss_pred hchhCcCCCeeEEEEEeCC----CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEE
Q 009965 363 SNIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
.+.||+|+||.||+|++.. ...||+|.+.... ......+|.+|+.++.+++||||+++++++...+ ..++|
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~iv 83 (266)
T cd05033 9 EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS---SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSR--PVMII 83 (266)
T ss_pred eeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC---ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCC--ceEEE
Confidence 3789999999999998852 3578999874322 2334567999999999999999999999998776 78999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|||+++|+|.+++.... ..++|.++.+++.|++.||+|||+. +|+||||||+||++++++.++|+|||+++.+.
T Consensus 84 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 157 (266)
T cd05033 84 TEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRLE 157 (266)
T ss_pred EEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhccc
Confidence 99999999999997433 3689999999999999999999998 99999999999999999999999999998774
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.9e-23 Score=199.39 Aligned_cols=143 Identities=21% Similarity=0.312 Sum_probs=125.7
Q ss_pred hchhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
.+.||+|+||.||+|+.+++..+|+|.+..... ...+|.+|++++.+++||||+++++++...+ ..++|+||+
T Consensus 9 ~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~e~~ 81 (256)
T cd05059 9 LKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-----SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQR--PIFIVTEYM 81 (256)
T ss_pred hhhhccCCCceEEEeEecCCccEEEEEeccCCC-----CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC--ceEEEEecC
Confidence 378999999999999988777899998743221 2346889999999999999999999998776 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++++|.++++.... .++|..+..|+.|+++||+|||+. +++||||||+||++++++.+||+|||+++...
T Consensus 82 ~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~ 151 (256)
T cd05059 82 ANGCLLNYLRERKG-KLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVL 151 (256)
T ss_pred CCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceecc
Confidence 99999999974332 589999999999999999999998 99999999999999999999999999987643
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.9e-23 Score=209.13 Aligned_cols=145 Identities=14% Similarity=0.099 Sum_probs=125.2
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
++||+|+||.||+++.+ +++.+|+|.+.... .......+.+.+|+.++..++|+||+++++++.+.+ ..++||||+
T Consensus 7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv~ey~ 83 (332)
T cd05623 7 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWE-MLKRAETACFREERDVLVNGDNQWITTLHYAFQDEN--NLYLVMDYY 83 (332)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEeHHH-HHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC--EEEEEEecc
Confidence 78999999999999987 57789999874322 112223456889999999999999999999998876 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
++|+|.++++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+
T Consensus 84 ~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~ 152 (332)
T cd05623 84 VGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKL 152 (332)
T ss_pred CCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheec
Confidence 9999999997422 3589999999999999999999998 9999999999999999999999999998754
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.3e-23 Score=199.24 Aligned_cols=142 Identities=21% Similarity=0.330 Sum_probs=125.3
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|+..++..+|+|.+..... ...+|.+|+.++.+++||||+++++++.... ..++||||++
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~ 82 (256)
T cd05113 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-----SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQR--PIYIVTEYMS 82 (256)
T ss_pred eEecCcccceEEEEEecCCCcEEEEEcCCCcc-----cHHHHHHHHHHHhcCCCCCeeeEEEEEccCC--CcEEEEEcCC
Confidence 68999999999999988777899998743221 2356899999999999999999999998766 6899999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+|+|.+++..... .++|..+.+++.+|+.||+|||+. +++|+||||+||++++++.+||+|||+++...
T Consensus 83 ~~~l~~~i~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~ 151 (256)
T cd05113 83 NGCLLNYLREHGK-RFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVL 151 (256)
T ss_pred CCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecC
Confidence 9999999964332 589999999999999999999998 99999999999999999999999999987543
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.6e-23 Score=207.91 Aligned_cols=143 Identities=17% Similarity=0.131 Sum_probs=123.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|+.. +++.+|+|.+..... ......+.+.+|+.++.++ +||||+++++++...+ ..++||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~--~~~lv~e~ 77 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELV-HDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTS--RLFLVIEY 77 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCC--EEEEEEeC
Confidence 36999999999999986 678999999854321 1223345688999999888 6999999999998776 79999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 78 ~~~~~L~~~~~~~~--~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~ 145 (327)
T cd05617 78 VNGGDLMFHMQRQR--KLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKE 145 (327)
T ss_pred CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEecccccee
Confidence 99999999885433 589999999999999999999998 999999999999999999999999999875
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.2e-23 Score=205.16 Aligned_cols=142 Identities=21% Similarity=0.269 Sum_probs=122.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|.+...... .....+.+|+.+++.++||||+++++++.+.. ..++||||+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e~~ 85 (303)
T cd07869 11 EKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE---GTPFTAIREASLLKGLKHANIVLLHDIIHTKE--TLTLVFEYV 85 (303)
T ss_pred eeEEecCCEEEEEEEECCCCCEEEEEEecccccc---ccchhHHHHHHHHhhCCCCCcCeEEEEEecCC--eEEEEEECC
Confidence 78999999999999987 6889999998543221 12345788999999999999999999998876 799999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
+ ++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 86 ~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 153 (303)
T cd07869 86 H-TDLCQYMDKH-PGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAK 153 (303)
T ss_pred C-cCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceec
Confidence 6 5888888643 23588999999999999999999998 9999999999999999999999999998754
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.8e-23 Score=203.25 Aligned_cols=145 Identities=25% Similarity=0.349 Sum_probs=124.2
Q ss_pred hchhCcCCCeeEEEEEe-----CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEE
Q 009965 363 SNIIGSSPDSLVYKGTM-----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~-----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
.+.||+|+||.||+|+. .++..+++|.+.... ......+|.+|++++++++||||+++++++.... ..++
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~l 84 (283)
T cd05090 10 MEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN---NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQ--PVCM 84 (283)
T ss_pred eeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC---CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCC--ceEE
Confidence 37899999999999985 245789999874322 1233457899999999999999999999998776 7899
Q ss_pred EEecCCCCChhhhhccCC---------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCC
Q 009965 438 VFDYASNGTLYEHLHYGE---------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF 502 (521)
Q Consensus 438 v~ey~~~gsL~~~l~~~~---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~ 502 (521)
||||+++|+|.+++..+. ...+++.+...++.+++.||+|||+. +++||||||+|||+++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCCC
Confidence 999999999999985221 23478999999999999999999998 999999999999999999
Q ss_pred CeeeCCCchhhhc
Q 009965 503 SPKVSPLCLSFLL 515 (521)
Q Consensus 503 ~~kl~DfGla~~~ 515 (521)
.+||+|||+++.+
T Consensus 162 ~~kl~dfg~~~~~ 174 (283)
T cd05090 162 HVKISDLGLSREI 174 (283)
T ss_pred cEEeccccccccc
Confidence 9999999999865
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-23 Score=181.43 Aligned_cols=144 Identities=15% Similarity=0.212 Sum_probs=126.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
++||+|.||+||||+.. ++..||+|++..... ++.......+|+.+++.++|+|||++++....++ ..-+|+||+
T Consensus 8 ekigegtygtvfkarn~~t~eivalkrvrlddd--degvpssalreicllkelkhknivrl~dvlhsdk--kltlvfe~c 83 (292)
T KOG0662|consen 8 EKIGEGTYGTVFKARNRETHEIVALKRVRLDDD--DEGVPSSALREICLLKELKHKNIVRLHDVLHSDK--KLTLVFEFC 83 (292)
T ss_pred HhhcCCcceeeEecccCCccceEEEEEEeccCC--CCCCcHHHHHHHHHHHHhhhcceeehhhhhccCc--eeEEeHHHh
Confidence 68999999999999886 578899999865442 2345567899999999999999999999998877 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
.. +|..|...-. ..++......++.|+.+||.|+|+. .+.|||+||.|.||+.+|+.|++|||+||-++
T Consensus 84 dq-dlkkyfdsln-g~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafg 152 (292)
T KOG0662|consen 84 DQ-DLKKYFDSLN-GDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFG 152 (292)
T ss_pred hH-HHHHHHHhcC-CcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcC
Confidence 76 8888875332 2488899999999999999999999 99999999999999999999999999999765
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-23 Score=213.24 Aligned_cols=146 Identities=18% Similarity=0.224 Sum_probs=129.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+-||+|+.|.|-.|++. +|+.+|||++....+. .......+.+|+.+|+-+.||||+++++.+++.. +.|+|.||+
T Consensus 18 kTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~-s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~--~lylvlEyv 94 (786)
T KOG0588|consen 18 KTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSEL-SSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQ--HLYLVLEYV 94 (786)
T ss_pred ccccCCCCceehhhhcccccceeEEEeecccccc-ccccccchhhhhHHHHHhcCCCeeeeeeeeccCc--eEEEEEEec
Confidence 56999999999999885 8999999999655321 2223456889999999999999999999999887 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++|.|++++..++ ++++.+..++..||..|+.|+|.. +|+|||+||+|+|||.+.++||+|||+|.+-.+
T Consensus 95 ~gGELFdylv~kG--~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~ 164 (786)
T KOG0588|consen 95 PGGELFDYLVRKG--PLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEVP 164 (786)
T ss_pred CCchhHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeecccC
Confidence 9999999997655 489999999999999999999999 999999999999999999999999999987543
|
|
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-23 Score=209.34 Aligned_cols=148 Identities=17% Similarity=0.191 Sum_probs=133.0
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCc-eEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFT-RMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~-~~lv~ey 441 (521)
+.+|+|+||.++.++.+ ++..+++|.+..... ....++...+|+.++++++|||||.+.+.+..++ . .+|||+|
T Consensus 10 ~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~--t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~--~~l~Ivm~Y 85 (426)
T KOG0589|consen 10 RQVGRGAFGSALLVRHKSDDKLYVLKKINLEKL--TEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDG--QLLCIVMEY 85 (426)
T ss_pred hhcCccccchhhhhhhccCCceEEEEEEecccc--CchhhHHHHHHHHHHHhccCCCeeeeccchhcCC--ceEEEEEee
Confidence 78999999999999887 678899999866542 2345567899999999999999999999998877 5 8999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcccc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~~ 518 (521)
+++|++.+.+.+..+..+++.+..+++.|++.|+.|||+. .|+|||||+.||++..+..+||+|||+||.+.+.
T Consensus 86 ~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 86 CEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE 159 (426)
T ss_pred cCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence 9999999999866666789999999999999999999998 9999999999999999999999999999998764
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.7e-23 Score=199.42 Aligned_cols=146 Identities=23% Similarity=0.241 Sum_probs=124.6
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecC---CCCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES---SPFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~---~~~~~~lv~ 439 (521)
+.||+|+||.|+.+... +|..||||++...- ...-..++..+|++++++++|+||+.+...+..+ +-...|+|+
T Consensus 28 ~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F--~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~ 105 (359)
T KOG0660|consen 28 EPIGRGAYGVVCSAKDKRTGEKVAIKKILNPF--ENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVF 105 (359)
T ss_pred ccccCcceeeEEEEEEcCCCCEeehhhhhhhh--hchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEeh
Confidence 57999999999999986 78999999984221 1223456788999999999999999999998652 222689999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
|+|+. +|.+.++.+. .|+.....-+..|+.+||.|+|+. +|+||||||+|+|++.+...||+|||+||.+++
T Consensus 106 elMet-DL~~iik~~~--~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~ 177 (359)
T KOG0660|consen 106 ELMET-DLHQIIKSQQ--DLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLARYLDK 177 (359)
T ss_pred hHHhh-HHHHHHHcCc--cccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccceeeccc
Confidence 99965 9999996433 488888999999999999999999 999999999999999999999999999999853
|
|
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.5e-23 Score=203.14 Aligned_cols=144 Identities=16% Similarity=0.183 Sum_probs=123.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.+ +++.+|+|++..... .....+.+.+|+.++.+++||||+++++++...+ ..++||||+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 82 (287)
T cd07848 7 GVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE--NEEVKETTLRELKMLRTLKQENIVELKEAFRRRG--KLYLVFEYV 82 (287)
T ss_pred EEecccCCEEEEEEEECCCCcEEEEEEEecccc--cccchhhHHHHHHHHHhCCCccccchhhhEecCC--EEEEEEecC
Confidence 68999999999999997 678899999854321 1233456889999999999999999999998776 799999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+++.+..+... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 83 ~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 151 (287)
T cd07848 83 EKNMLELLEEM--PNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLS 151 (287)
T ss_pred CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccccc
Confidence 98777655432 23589999999999999999999998 99999999999999999999999999998754
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.2e-23 Score=197.75 Aligned_cols=142 Identities=23% Similarity=0.329 Sum_probs=121.7
Q ss_pred hhCcCCCeeEEEEEeC---CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEec
Q 009965 365 IIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 365 ~ig~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
.||+|+||.||+|++. ++..||+|.+.... .....++|.+|+.++++++||||+++++++... ..++||||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~---~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~---~~~lv~e~ 75 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN---EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAE---ALMLVMEM 75 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc---ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCC---CeEEEEEe
Confidence 3899999999999874 34568999874332 233456799999999999999999999998643 57999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+++|+|.+++... ...+++.++.+++.|+++||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 76 ~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~ 146 (257)
T cd05115 76 ASGGPLNKFLSGK-KDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALG 146 (257)
T ss_pred CCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCcccccc
Confidence 9999999999643 23589999999999999999999998 99999999999999999999999999997653
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.5e-23 Score=205.82 Aligned_cols=143 Identities=18% Similarity=0.152 Sum_probs=123.2
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||+||+|+.. ++..||+|.+...... .......+..|.+++..+ +||||+++++++...+ ..++||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~--~~~lv~e~ 77 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVIL-QDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKD--RLFFVMEY 77 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHh-hhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC--EEEEEEcC
Confidence 36899999999999987 5789999998543211 122345677899999888 7999999999998876 89999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 78 ~~~~~L~~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~ 145 (318)
T cd05570 78 VNGGDLMFHIQRSG--RFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKE 145 (318)
T ss_pred CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCee
Confidence 99999999886443 489999999999999999999998 999999999999999999999999999864
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.5e-23 Score=206.37 Aligned_cols=142 Identities=19% Similarity=0.172 Sum_probs=120.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHH---hccCCCCccceeeEEecCCCCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADL---ARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l---~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||.||+|... +++.||||.+...... .....+.+.+|++++ .+++||||+++++++...+ ..++||
T Consensus 5 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~--~~~lv~ 81 (324)
T cd05589 5 AVLGRGHFGKVLLAEYKKTGELYAIKALKKGDII-ARDEVESLMCEKRIFETANSERHPFLVNLFACFQTED--HVCFVM 81 (324)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCC--EEEEEE
Confidence 67999999999999886 6889999998543211 122334566676654 5678999999999998877 899999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
||+++|+|..+++. ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 82 E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~ 150 (324)
T cd05589 82 EYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKE 150 (324)
T ss_pred cCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCcc
Confidence 99999999988853 2489999999999999999999998 999999999999999999999999999875
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.2e-23 Score=205.21 Aligned_cols=143 Identities=17% Similarity=0.167 Sum_probs=121.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|+.. +++.||+|.+...... .....+.+..|..++... +||||+++++++.+.+ ..++||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~--~~~lv~ey 77 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVL-MDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKE--NLFFVMEY 77 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCC--EEEEEEeC
Confidence 36899999999999987 5789999998543211 112234566788888764 9999999999998877 79999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
+++|+|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 78 ~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~ 145 (316)
T cd05619 78 LNGGDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKE 145 (316)
T ss_pred CCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceE
Confidence 9999999999643 3489999999999999999999998 999999999999999999999999999874
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.9e-23 Score=197.80 Aligned_cols=146 Identities=18% Similarity=0.122 Sum_probs=130.5
Q ss_pred chhCcCCCeeEEEEEeCC-CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
..||+|.-|+||.+++++ +..+|+|++.+... ..+....+...|-+||+.++||-+++|++.++.+. ..+++||||
T Consensus 83 k~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l-~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~--~~cl~meyC 159 (459)
T KOG0610|consen 83 KRLGCGDIGTVYLVELRGTNCLFAMKVMDKESL-ASRKKLKRAQTEREILSLLDHPFLPTLYASFETDK--YSCLVMEYC 159 (459)
T ss_pred HHcCCCCceeEEEEEecCCCceEEEEEecHHHH-hhhhHHHHHHHHHHHHHhcCCCccchhhheeeccc--eeEEEEecC
Confidence 689999999999999984 68999999854432 22334456788999999999999999999999988 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
++|+|...++++....++.....-+|.+|.-||+|||-. |||.|||||+|||+.++|++-|+||-|+...
T Consensus 160 pGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 160 PGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRC 229 (459)
T ss_pred CCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccC
Confidence 999999999877777899999999999999999999999 9999999999999999999999999998764
|
|
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.7e-23 Score=196.95 Aligned_cols=147 Identities=20% Similarity=0.201 Sum_probs=129.9
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||+|+.. ++..|++|.+.... ......+++.+|++++++++|||++++++++.+.+ ..++||||+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 81 (256)
T cd08529 6 NKIGKGSFGVVFKVVRKADKRVYAMKQIDLSK--MNRREREEAIDEARVLAKLDSSYIIRYYESFLDKG--KLNIVMEYA 81 (256)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEeehhh--CCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCC--EEEEEEEeC
Confidence 78999999999999986 68899999875432 12344567999999999999999999999998876 799999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++++|.++++......+++.++.+++.+++.||.|||+. +++||||||+||++++++.++|+|||+++.+..
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~ 153 (256)
T cd08529 82 ENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSD 153 (256)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccC
Confidence 999999999765445689999999999999999999998 999999999999999999999999999886543
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.8e-23 Score=206.67 Aligned_cols=146 Identities=16% Similarity=0.096 Sum_probs=123.3
Q ss_pred hhchhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCCccceeeEEecCCCCceEEEE
Q 009965 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 362 ~~~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.+.||+|+||.||+|+.. +++.||+|.+...... .....+.+..|..++..+. |++|+++.+++...+ ..++||
T Consensus 4 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~--~~~lv~ 80 (323)
T cd05615 4 FLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVI-QDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVD--RLYFVM 80 (323)
T ss_pred EEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhccCCCchhheeeEEecCC--EEEEEE
Confidence 3478999999999999886 6889999988533211 1223456788999998885 577888988888776 789999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
||+++|+|.+++.... .+++.++..|+.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 81 Ey~~~g~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~ 151 (323)
T cd05615 81 EYVNGGDLMYHIQQVG--KFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEH 151 (323)
T ss_pred cCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEecccccccc
Confidence 9999999999986433 489999999999999999999998 9999999999999999999999999998753
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.3e-23 Score=205.15 Aligned_cols=143 Identities=18% Similarity=0.156 Sum_probs=121.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
++||+|+||.||+|+.. +|..||+|.+...... .....+.+..|.+++... +||||+++++++.+.+ ..++||||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~--~~~lv~E~ 77 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVL-IDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKE--HLFFVMEF 77 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCC--EEEEEECC
Confidence 36999999999999987 6889999998543211 112234567788888755 8999999999998877 89999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
+++|+|.+++.... .+++.+...++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 78 ~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~ 145 (316)
T cd05620 78 LNGGDLMFHIQDKG--RFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKE 145 (316)
T ss_pred CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCee
Confidence 99999999986443 488999999999999999999998 999999999999999999999999999874
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.7e-23 Score=200.72 Aligned_cols=140 Identities=17% Similarity=0.270 Sum_probs=116.7
Q ss_pred hhCcCCCeeEEEEEeCC-------------------------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCC
Q 009965 365 IIGSSPDSLVYKGTMKG-------------------------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN 419 (521)
Q Consensus 365 ~ig~G~~g~Vy~~~~~~-------------------------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n 419 (521)
.||+|+||.||+|++.. ...|++|.+.... .....+|.+|+.+++.++|||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~~~~~~~~~l~h~n 77 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH----RDIALAFFETASLMSQVSHIH 77 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH----HHHHHHHHHHHHHHhcCCCCC
Confidence 58999999999997531 1247777763221 223457889999999999999
Q ss_pred ccceeeEEecCCCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeec
Q 009965 420 TGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT 499 (521)
Q Consensus 420 iv~l~g~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld 499 (521)
|++++++|.+.. ..++||||+++|+|..++... ...+++..+.+++.|+++||+|||+. +|+||||||+|||++
T Consensus 78 iv~~~~~~~~~~--~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~ 151 (274)
T cd05076 78 LAFVHGVCVRGS--ENIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLA 151 (274)
T ss_pred eeeEEEEEEeCC--ceEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEe
Confidence 999999998877 789999999999999998643 33589999999999999999999998 999999999999997
Q ss_pred CCC-------CeeeCCCchhhh
Q 009965 500 EDF-------SPKVSPLCLSFL 514 (521)
Q Consensus 500 ~~~-------~~kl~DfGla~~ 514 (521)
+++ .+|++|||+++.
T Consensus 152 ~~~~~~~~~~~~kl~d~g~~~~ 173 (274)
T cd05076 152 RLGLAEGTSPFIKLSDPGVSFT 173 (274)
T ss_pred ccCcccCccceeeecCCccccc
Confidence 644 379999998754
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.3e-23 Score=205.95 Aligned_cols=143 Identities=17% Similarity=0.092 Sum_probs=121.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCC-CccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHE-NTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~-niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|+.. +++.||+|.+..... ......+.+..|.+++..++|+ +|+++.+++...+ ..++||||
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~--~~~lv~E~ 82 (324)
T cd05587 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVI-IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--RLYFVMEY 82 (324)
T ss_pred EEEeeccCeEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCC--EEEEEEcC
Confidence 78999999999999987 578899999854321 1122345688899999999765 5788888887766 79999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 83 ~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~ 150 (324)
T cd05587 83 VNGGDLMYHIQQVG--KFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKE 150 (324)
T ss_pred CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCccee
Confidence 99999999986433 489999999999999999999998 999999999999999999999999999874
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.89 E-value=7e-23 Score=200.73 Aligned_cols=144 Identities=19% Similarity=0.327 Sum_probs=122.8
Q ss_pred chhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEE
Q 009965 364 NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
+.||+|+||.||+|... ++..||+|++.... ......+|.+|+.++..++||||+++++++.... ..++
T Consensus 12 ~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~---~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~--~~~l 86 (277)
T cd05062 12 RELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ--PTLV 86 (277)
T ss_pred eeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC--CeEE
Confidence 78999999999999764 24679999873221 1223457899999999999999999999998776 7899
Q ss_pred EEecCCCCChhhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCC
Q 009965 438 VFDYASNGTLYEHLHYGE--------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPL 509 (521)
Q Consensus 438 v~ey~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~Df 509 (521)
||||+++|+|.++++... ...++|.++..++.|+++||+|||+. +++||||||+||++++++.++|+||
T Consensus 87 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~l~df 163 (277)
T cd05062 87 IMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDF 163 (277)
T ss_pred EEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEEECCC
Confidence 999999999999986421 23468999999999999999999998 9999999999999999999999999
Q ss_pred chhhhc
Q 009965 510 CLSFLL 515 (521)
Q Consensus 510 Gla~~~ 515 (521)
|+++.+
T Consensus 164 g~~~~~ 169 (277)
T cd05062 164 GMTRDI 169 (277)
T ss_pred CCcccc
Confidence 998754
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.8e-23 Score=198.10 Aligned_cols=143 Identities=20% Similarity=0.286 Sum_probs=124.8
Q ss_pred hchhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
.+.||+|+||.||+|+..++..||+|++..... ..++|.+|+.++.+++||||+++++++... ..++||||+
T Consensus 11 ~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-----~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~---~~~lv~e~~ 82 (262)
T cd05071 11 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----SPEAFLQEAQVMKKLRHEKLVQLYAVVSEE---PIYIVTEYM 82 (262)
T ss_pred eeecCCCCCCcEEEEEecCCceEEEEecccCcc-----CHHHHHHHHHHHHhCCCCCcceEEEEECCC---CcEEEEEcC
Confidence 378999999999999988777899998853221 235689999999999999999999987543 579999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.++++......++|..+..++.++++||+|||+. +++||||||+||++++++.++|+|||.++.+.
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~ 153 (262)
T cd05071 83 SKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 153 (262)
T ss_pred CCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeecc
Confidence 999999999754444689999999999999999999998 99999999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.5e-23 Score=216.36 Aligned_cols=146 Identities=16% Similarity=0.224 Sum_probs=125.0
Q ss_pred hchhCcCCCeeEEEEEeC-C-CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEe
Q 009965 363 SNIIGSSPDSLVYKGTMK-G-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~-~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
.+.||+|++|.||+|... + +..||+|.+.... ......+.+|+.+++.++|||||++++++...+ ..++|||
T Consensus 72 ~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~----~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~--~~~lv~E 145 (478)
T PTZ00267 72 TTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND----ERQAAYARSELHCLAACDHFGIVKHFDDFKSDD--KLLLIME 145 (478)
T ss_pred EEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC----HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECC--EEEEEEE
Confidence 378999999999999765 4 5678888763321 223356788999999999999999999998877 8999999
Q ss_pred cCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 441 YASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 441 y~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
|+++|+|.++++.. ...++++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+..
T Consensus 146 ~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~ 221 (478)
T PTZ00267 146 YGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSD 221 (478)
T ss_pred CCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCC
Confidence 99999999988532 234689999999999999999999998 999999999999999999999999999987643
|
|
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.2e-23 Score=205.41 Aligned_cols=144 Identities=16% Similarity=0.074 Sum_probs=122.5
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|+.. ++..||+|.+...... .....+.+..|..++..+ +|++|+++.+++...+ ..++||||
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~--~~~lv~E~ 82 (323)
T cd05616 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVI-QDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMD--RLYFVMEY 82 (323)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCC--EEEEEEcC
Confidence 78999999999999887 5789999998543211 122334567788888877 5899999999998776 79999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 83 ~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~ 151 (323)
T cd05616 83 VNGGDLMYQIQQVG--RFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 151 (323)
T ss_pred CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceec
Confidence 99999999986433 489999999999999999999998 9999999999999999999999999998753
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-22 Score=198.33 Aligned_cols=143 Identities=24% Similarity=0.277 Sum_probs=121.6
Q ss_pred hhCcCCCeeEEEEEeCC---CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEec
Q 009965 365 IIGSSPDSLVYKGTMKG---GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 365 ~ig~G~~g~Vy~~~~~~---~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
.||+|+||.||+|+..+ +..+|+|.+.... .......|.+|+.++++++||||+++++++.+.. ..++||||
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 76 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSA---SVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVT--PYLLVMEF 76 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCC---ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC--CcEEEEEC
Confidence 58999999999998753 3568888874332 1233457899999999999999999999998776 78999999
Q ss_pred CCCCChhhhhccCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 442 ASNGTLYEHLHYGE---RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 442 ~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
+++|+|.++++... ....++..+..++.|++.||+|||+. +++||||||+||++++++++||+|||+++..
T Consensus 77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~ 150 (269)
T cd05087 77 CPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNK 150 (269)
T ss_pred CCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccc
Confidence 99999999996422 23467888899999999999999998 9999999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.9e-23 Score=201.02 Aligned_cols=146 Identities=19% Similarity=0.125 Sum_probs=126.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+++.. +++.+|+|.+...... .......+.+|+.++.+++|+|++++.+++...+ ..++||||+
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~--~~~lv~e~~ 82 (285)
T cd05632 6 RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIK-KRKGESMALNEKQILEKVNSQFVVNLAYAYETKD--ALCLVLTIM 82 (285)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEeehhhhh-hhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCC--EEEEEEEec
Confidence 67999999999999886 6889999988543211 1223345788999999999999999999998776 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
++|+|.+++.......+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~ 152 (285)
T cd05632 83 NGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKI 152 (285)
T ss_pred cCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceec
Confidence 999999988654444699999999999999999999998 9999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-22 Score=197.38 Aligned_cols=143 Identities=17% Similarity=0.315 Sum_probs=124.9
Q ss_pred hchhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
...||+|++|.||++...++..+|+|.+.... ...+.+.+|+.++++++|||++++++++.. + ..+++|||+
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~--~~~~v~e~~ 82 (260)
T cd05069 11 DVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-----MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-E--PIYIVTEFM 82 (260)
T ss_pred eeeecCcCCCeEEEEEEcCCceEEEEEcccCC-----ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC-C--CcEEEEEcC
Confidence 37899999999999998877789999874322 124568999999999999999999998854 3 578999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.++++......++|..+..++.+++.||+|||+. +++||||||+||++++++.++|+|||+++.+.
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~ 153 (260)
T cd05069 83 GKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIE 153 (260)
T ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEcc
Confidence 999999999755445689999999999999999999998 99999999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-22 Score=198.01 Aligned_cols=149 Identities=21% Similarity=0.304 Sum_probs=123.0
Q ss_pred hchhCcCCCeeEEEEEeCC-CC--EEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCC----CCce
Q 009965 363 SNIIGSSPDSLVYKGTMKG-GP--EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----PFTR 435 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~~-~~--~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~~~ 435 (521)
.+.||+|+||.||+|+..+ +. .+|+|.+..... .....+.|.+|+.++..++||||++++++|.... ....
T Consensus 4 ~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 4 GKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAIC--TRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccCcccCceEEEeEEccCCCeeeEEEEecccCcC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 4689999999999999864 33 588888743321 2233567899999999999999999999885422 1146
Q ss_pred EEEEecCCCCChhhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCch
Q 009965 436 MLVFDYASNGTLYEHLHYG----ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCL 511 (521)
Q Consensus 436 ~lv~ey~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGl 511 (521)
++++||+++|+|.+++... ....++|.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCCc
Confidence 8999999999999987421 234589999999999999999999998 999999999999999999999999999
Q ss_pred hhhcc
Q 009965 512 SFLLV 516 (521)
Q Consensus 512 a~~~~ 516 (521)
++.+.
T Consensus 159 ~~~~~ 163 (272)
T cd05075 159 SKKIY 163 (272)
T ss_pred ccccC
Confidence 98764
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.2e-23 Score=206.56 Aligned_cols=144 Identities=17% Similarity=0.207 Sum_probs=122.0
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC---CceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP---FTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~---~~~~lv~ 439 (521)
+.||+|+||.||+|+.. ++..||||++...... .....++.+|+.++++++||||+++++++..... ...++||
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~ 83 (338)
T cd07859 6 EVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEH--VSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVF 83 (338)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEechhhcc--chhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEE
Confidence 68999999999999986 6899999988532211 1223568899999999999999999999864331 1479999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
||++ ++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 84 e~~~-~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~ 153 (338)
T cd07859 84 ELME-SDLHQVIKAND--DLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARVA 153 (338)
T ss_pred ecCC-CCHHHHHHhcc--cCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCcccccc
Confidence 9996 59999986433 489999999999999999999999 9999999999999999999999999999854
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.9e-23 Score=223.37 Aligned_cols=146 Identities=16% Similarity=0.113 Sum_probs=126.6
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
++||+|+||.||+|+.. +++.||+|++.... .......++|.+|++++++++||||+++++++.+.+ ..++||||+
T Consensus 8 ~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l-~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~--~lyLVMEY~ 84 (932)
T PRK13184 8 RLIGKGGMGEVYLAYDPVCSRRVALKKIREDL-SENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGD--PVYYTMPYI 84 (932)
T ss_pred EEEecCCCEEEEEEEECCCCcEEEEEEECccc-ccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCC--EEEEEEEcC
Confidence 78999999999999986 68899999985332 122334567999999999999999999999998876 789999999
Q ss_pred CCCChhhhhccC---------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhh
Q 009965 443 SNGTLYEHLHYG---------ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSF 513 (521)
Q Consensus 443 ~~gsL~~~l~~~---------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~ 513 (521)
++|+|.+++... ....+++..+.+++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 85 eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFGLAk 161 (932)
T PRK13184 85 EGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWGAAI 161 (932)
T ss_pred CCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecCcce
Confidence 999999998631 123467888999999999999999998 99999999999999999999999999998
Q ss_pred hc
Q 009965 514 LL 515 (521)
Q Consensus 514 ~~ 515 (521)
..
T Consensus 162 ~i 163 (932)
T PRK13184 162 FK 163 (932)
T ss_pred ec
Confidence 76
|
|
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-22 Score=198.82 Aligned_cols=143 Identities=20% Similarity=0.285 Sum_probs=119.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCE----EEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPE----IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~----vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||+||+|++. ++.. +++|.+... .......++..|+.++++++||||+++++++... ..+++
T Consensus 13 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~---~~~~i 86 (279)
T cd05111 13 KLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR---SGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGA---SLQLV 86 (279)
T ss_pred cccCccCCcceEEEEEcCCCCceeeEEEEeecccc---cchHHHHHHHHHHHHHhcCCCCCcceEEEEECCC---ccEEE
Confidence 68999999999999885 4543 556655221 1123345788899999999999999999998643 46899
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+||+++|+|.++++... ..++|..+..++.||+.||+|||+. +++||||||+|||+++++.+||+|||+++.+.
T Consensus 87 ~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~ 160 (279)
T cd05111 87 TQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADLLY 160 (279)
T ss_pred EEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccceecc
Confidence 99999999999996433 3589999999999999999999998 99999999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.4e-23 Score=201.96 Aligned_cols=147 Identities=20% Similarity=0.238 Sum_probs=126.3
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+++|.|.||+||-|+.+ +|+.||||.+.+.+.. .+.+...++|+.||++++||.||.+.-.|+..+ ..++|||-+
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp--~kqesqlR~EVaILq~l~HPGiV~le~M~ET~e--rvFVVMEKl 645 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFP--TKQESQLRNEVAILQNLHHPGIVNLECMFETPE--RVFVVMEKL 645 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCC--CchHHHHHHHHHHHHhcCCCCeeEEEEeecCCc--eEEEEehhh
Confidence 89999999999999987 7999999998654322 233467899999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCC---CCeeeCCCchhhhcccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED---FSPKVSPLCLSFLLVSS 518 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~---~~~kl~DfGla~~~~~~ 518 (521)
. |+..+++-......|++..-..++.||..||.|||.. +|+|+||||+|||+.+. -.+||||||+||++.+.
T Consensus 646 ~-GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk 720 (888)
T KOG4236|consen 646 H-GDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK 720 (888)
T ss_pred c-chHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecchh
Confidence 4 5887777655545688988888999999999999999 99999999999999643 37999999999998754
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.5e-23 Score=207.93 Aligned_cols=148 Identities=22% Similarity=0.294 Sum_probs=128.3
Q ss_pred hhchhCcCCCeeEEEEEeCC---CC--EEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceE
Q 009965 362 FSNIIGSSPDSLVYKGTMKG---GP--EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 362 ~~~~ig~G~~g~Vy~~~~~~---~~--~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
..++||.|-||.||+|.+.+ |. .||||..+. +......+.|+.|.-+|++++|||||+++|+|.+. ..|
T Consensus 393 l~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~---d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~---P~W 466 (974)
T KOG4257|consen 393 LKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKT---DCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ---PMW 466 (974)
T ss_pred HHHhhcCCcccceeeeEecccccCcceeeeeehhcc---CCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc---cee
Confidence 34799999999999998843 33 577776532 23334467899999999999999999999999876 489
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
||||.++.|.|++||..+. ..|+..+...++.|++.||+|||+. ++|||||.++|||+.....+|++||||+|.++
T Consensus 467 ivmEL~~~GELr~yLq~nk-~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~e 542 (974)
T KOG4257|consen 467 IVMELAPLGELREYLQQNK-DSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRYLE 542 (974)
T ss_pred EEEecccchhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhhcc
Confidence 9999999999999997544 3589999999999999999999999 99999999999999999999999999999988
Q ss_pred ccc
Q 009965 517 SSI 519 (521)
Q Consensus 517 ~~~ 519 (521)
+.+
T Consensus 543 d~~ 545 (974)
T KOG4257|consen 543 DDA 545 (974)
T ss_pred ccc
Confidence 754
|
|
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.6e-23 Score=200.79 Aligned_cols=147 Identities=19% Similarity=0.136 Sum_probs=127.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||++... +++.+|+|.+...... .....+.+.+|+.++.+++|+|++++++.+.+.+ ..++||||+
T Consensus 6 ~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~--~~~lv~e~~ 82 (285)
T cd05630 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-KRKGESMALNEKQILEKVNSRFVVSLAYAYETKD--ALCLVLTLM 82 (285)
T ss_pred EEeecCCCeEEEEEEEcCCCceEEEEEEehhhcc-chHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCC--EEEEEEEec
Confidence 67999999999999887 6889999988543211 2223356788999999999999999999998876 799999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.......+++.++..++.|++.||+|||+. +|+||||||+||++++++.++|+|||++....
T Consensus 83 ~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 153 (285)
T cd05630 83 NGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVP 153 (285)
T ss_pred CCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecC
Confidence 999999998654445689999999999999999999998 99999999999999999999999999987643
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-22 Score=197.33 Aligned_cols=144 Identities=17% Similarity=0.317 Sum_probs=126.8
Q ss_pred hhchhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEec
Q 009965 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 362 ~~~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.++||+|+||.||+|..++++.+|+|.+..... ...+|.+|+.++++++|+||+++++++... ..+++|||
T Consensus 10 ~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~v~e~ 81 (260)
T cd05067 10 LVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-----SPEAFLAEANLMKQLQHPRLVRLYAVVTQE---PIYIITEY 81 (260)
T ss_pred eeeeeccCccceEEeeecCCCceEEEEEecCCCC-----cHHHHHHHHHHHHhcCCcCeeeEEEEEccC---CcEEEEEc
Confidence 3478999999999999988889999998753221 235689999999999999999999987543 58999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+++|+|.+++.......+++.++..++.|++.||+|||+. +++||||||+||++++++.++|+|||+++...
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 153 (260)
T cd05067 82 MENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIE 153 (260)
T ss_pred CCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecC
Confidence 9999999998755555789999999999999999999998 99999999999999999999999999997654
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-23 Score=195.90 Aligned_cols=148 Identities=23% Similarity=0.288 Sum_probs=123.1
Q ss_pred chhCcCCCeeEEEEEeCC-----CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEE
Q 009965 364 NIIGSSPDSLVYKGTMKG-----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~-----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
..||+|.||.||+++-.+ ...+|+|++....+. ........+|+.+++.++||||+.|..++...+ ...+++
T Consensus 30 g~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~--tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d-~~v~l~ 106 (438)
T KOG0666|consen 30 GKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDG--TGISMSACREIALLRELKHPNVISLVKVFLSHD-KKVWLL 106 (438)
T ss_pred ceecccccceeeEeeeccCCcccchhhHHHHHhccCCC--CCcCHHHHHHHHHHHHhcCCcchhHHHHHhccC-ceEEEE
Confidence 579999999999996542 237999998544322 223456778999999999999999999987732 278999
Q ss_pred EecCCCCChhhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCC----CCeeeCCCch
Q 009965 439 FDYASNGTLYEHLHYG---ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED----FSPKVSPLCL 511 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~----~~~kl~DfGl 511 (521)
+||.++ +|.+.++.. ....++......|..||..|+.|||+. -|+||||||.|||+..+ |.+||+|||+
T Consensus 107 fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKIaDlGl 182 (438)
T KOG0666|consen 107 FDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKIADLGL 182 (438)
T ss_pred ehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEeecccH
Confidence 999999 999998732 235688999999999999999999999 89999999999999776 8999999999
Q ss_pred hhhcccc
Q 009965 512 SFLLVSS 518 (521)
Q Consensus 512 a~~~~~~ 518 (521)
||++.+.
T Consensus 183 aR~~~~p 189 (438)
T KOG0666|consen 183 ARLFNNP 189 (438)
T ss_pred HHHhhcc
Confidence 9987653
|
|
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=5e-23 Score=208.11 Aligned_cols=145 Identities=22% Similarity=0.272 Sum_probs=128.2
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
..||+|.|++|..++.. ++.+||+|.+.....+ ....+.+.+|+++|..++|||||+++.+..... ..|+||||+
T Consensus 62 ~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln--~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~--~lylV~eya 137 (596)
T KOG0586|consen 62 KTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLN--PSKRQKLGREVDIMKSLNHPNIVKLFSVIETEA--TLYLVMEYA 137 (596)
T ss_pred eeeccceeEEEEeeEecCCCceEEEEEehhcccC--hHHHHHHHHHHHHHHhcCCcceeeeeeeeeecc--eeEEEEEec
Confidence 67999999999999987 7899999988544322 334456899999999999999999999999877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
.+|.+++|+....+ +.......+..|+..|++|+|++ .|||||||++|||||.++++||+|||++.+++.
T Consensus 138 ~~ge~~~yl~~~gr--~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~ 207 (596)
T KOG0586|consen 138 SGGELFDYLVKHGR--MKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFDY 207 (596)
T ss_pred cCchhHHHHHhccc--chhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeecc
Confidence 99999999976554 45577888999999999999999 999999999999999999999999999998764
|
|
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.6e-23 Score=209.62 Aligned_cols=144 Identities=19% Similarity=0.274 Sum_probs=123.3
Q ss_pred chhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCCccceeeEEecCCCCceE
Q 009965 364 NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~ 436 (521)
+.||+|+||.||+|++. .+..||+|++..... ....+.+.+|++++.++. |||||+++++|.... ..+
T Consensus 43 ~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~--~~~ 117 (401)
T cd05107 43 RTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR---SSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG--PIY 117 (401)
T ss_pred hhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC---hhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC--CcE
Confidence 78999999999999864 245799999853321 223456899999999997 999999999998876 789
Q ss_pred EEEecCCCCChhhhhccCC-------------------------------------------------------------
Q 009965 437 LVFDYASNGTLYEHLHYGE------------------------------------------------------------- 455 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~------------------------------------------------------------- 455 (521)
+|+||+++|+|.++++...
T Consensus 118 iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (401)
T cd05107 118 IITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKG 197 (401)
T ss_pred EEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchh
Confidence 9999999999999996421
Q ss_pred -----------------------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC
Q 009965 456 -----------------------------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE 500 (521)
Q Consensus 456 -----------------------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~ 500 (521)
...++|.++.+|+.|++.||+|||+. +++||||||+|||+++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~NiLl~~ 274 (401)
T cd05107 198 TVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNVLICE 274 (401)
T ss_pred hhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcceEEEeC
Confidence 12478888999999999999999998 9999999999999999
Q ss_pred CCCeeeCCCchhhhc
Q 009965 501 DFSPKVSPLCLSFLL 515 (521)
Q Consensus 501 ~~~~kl~DfGla~~~ 515 (521)
++.+||+|||+++.+
T Consensus 275 ~~~~kL~DfGla~~~ 289 (401)
T cd05107 275 GKLVKICDFGLARDI 289 (401)
T ss_pred CCEEEEEecCcceec
Confidence 999999999999864
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-22 Score=200.45 Aligned_cols=147 Identities=22% Similarity=0.275 Sum_probs=120.0
Q ss_pred chhCcCCCeeEEEEEeC--CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc---CCCCccceeeEEecC---CCCce
Q 009965 364 NIIGSSPDSLVYKGTMK--GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI---NHENTGKLLGYCRES---SPFTR 435 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~--~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~~---~~~~~ 435 (521)
+.||+|+||.||+|+.. ++..||+|.+...... ......+.+|+.++..+ +||||++++++|... .....
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~ 84 (290)
T cd07862 7 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE--EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKL 84 (290)
T ss_pred eEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCC--CCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcE
Confidence 67999999999999874 4678999988543321 12233566777776665 699999999998532 12258
Q ss_pred EEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 436 ~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
++||||++ ++|.+++.......+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 85 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T cd07862 85 TLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY 160 (290)
T ss_pred EEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccccceEec
Confidence 99999997 5999999755555689999999999999999999998 9999999999999999999999999999765
Q ss_pred c
Q 009965 516 V 516 (521)
Q Consensus 516 ~ 516 (521)
.
T Consensus 161 ~ 161 (290)
T cd07862 161 S 161 (290)
T ss_pred c
Confidence 4
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.6e-22 Score=195.98 Aligned_cols=142 Identities=25% Similarity=0.321 Sum_probs=122.9
Q ss_pred hhCcCCCeeEEEEEeC---CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEec
Q 009965 365 IIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 365 ~ig~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
.||+|+||.||+|.++ ++..+|+|++.... ......+++.+|+.++++++||||+++++++... ..++||||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~lv~e~ 76 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN--NDPALKDELLREANVMQQLDNPYIVRMIGICEAE---SWMLVMEL 76 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC--CcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC---CcEEEEec
Confidence 5899999999999763 56789999874332 2233456799999999999999999999998654 47899999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+++|+|.+++.... .+++..+.+++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 77 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~ 146 (257)
T cd05116 77 AELGPLNKFLQKNK--HVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALG 146 (257)
T ss_pred CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccC
Confidence 99999999996433 589999999999999999999998 99999999999999999999999999998664
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.6e-22 Score=196.27 Aligned_cols=143 Identities=20% Similarity=0.326 Sum_probs=125.8
Q ss_pred hchhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
.+.||+|+||.||+|..+++..+|+|.+..... ..++|.+|+.++.+++|+|++++++++... ..+++|||+
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-----~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~---~~~lv~e~~ 82 (260)
T cd05070 11 IKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-----SPESFLEEAQIMKKLRHDKLVQLYAVVSEE---PIYIVTEYM 82 (260)
T ss_pred hheeccccCceEEEEEecCCceeEEEEecCCCC-----CHHHHHHHHHHHHhcCCCceEEEEeEECCC---CcEEEEEec
Confidence 378999999999999988888899998854322 235689999999999999999999988543 578999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.++++......+++.++..++.+++.||+|||+. +++||||||+||++++++.++|+|||+++.+.
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~ 153 (260)
T cd05070 83 SKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIE 153 (260)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeecc
Confidence 999999999755445689999999999999999999998 99999999999999999999999999987654
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.8e-22 Score=198.11 Aligned_cols=143 Identities=22% Similarity=0.285 Sum_probs=122.8
Q ss_pred chhCcCCCeeEEEEEeC-CCC----EEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGP----EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~----~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||+||+|++. ++. .||+|.+... ......+++.+|+.++..++||||+++++++... ..+++
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~---~~~l~ 86 (279)
T cd05109 13 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLREN---TSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS---TVQLV 86 (279)
T ss_pred eecCCCCCceEEEEEEecCCCccceEEEEEEecCC---CCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC---CcEEE
Confidence 78999999999999864 444 3788887432 2233456789999999999999999999999764 47899
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+||+++|+|.++++... ..+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 87 ~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~ 160 (279)
T cd05109 87 TQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLD 160 (279)
T ss_pred EEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceeecc
Confidence 99999999999997433 3589999999999999999999998 99999999999999999999999999998664
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-22 Score=196.72 Aligned_cols=141 Identities=18% Similarity=0.297 Sum_probs=119.8
Q ss_pred chhCcCCCeeEEEEEeCCCC-----------EEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGP-----------EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~-----------~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 432 (521)
+.||+|+||.||+|...+.. .+++|.+.... .....|.+|+.++++++||||+++++++.. .
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~- 73 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH-----RDSLAFFETASLMSQLSHKHLVKLYGVCVR-D- 73 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch-----hhHHHHHHHHHHHHcCCCcchhheeeEEec-C-
Confidence 46899999999999986432 46666553221 114678999999999999999999999987 4
Q ss_pred CceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCC-------Cee
Q 009965 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-------SPK 505 (521)
Q Consensus 433 ~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~-------~~k 505 (521)
..++|+||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+|
T Consensus 74 -~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~k 148 (259)
T cd05037 74 -ENIMVEEYVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIK 148 (259)
T ss_pred -CcEEEEEcCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEE
Confidence 67999999999999999974432 589999999999999999999998 999999999999999888 799
Q ss_pred eCCCchhhhcc
Q 009965 506 VSPLCLSFLLV 516 (521)
Q Consensus 506 l~DfGla~~~~ 516 (521)
|+|||+++.+.
T Consensus 149 l~Dfg~a~~~~ 159 (259)
T cd05037 149 LSDPGIPITVL 159 (259)
T ss_pred eCCCCcccccc
Confidence 99999988743
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.8e-22 Score=198.45 Aligned_cols=144 Identities=22% Similarity=0.274 Sum_probs=123.6
Q ss_pred chhCcCCCeeEEEEEe-----CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEE
Q 009965 364 NIIGSSPDSLVYKGTM-----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~-----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||+||++.+ .++..||+|.+.... .......|.+|++++++++||||+++++++........++|
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 10 RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC---GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eecccCCCcEEEEeeEccccCCCCceEEEEEecccc---ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 6899999999988754 256789999874322 12335678899999999999999999999876543368999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|||+++|+|.+++... .++|.++..++.|+++||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 87 ~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 87 MEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred ecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccccccC
Confidence 9999999999999643 489999999999999999999998 99999999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.8e-22 Score=198.67 Aligned_cols=146 Identities=21% Similarity=0.324 Sum_probs=125.7
Q ss_pred chhCcCCCeeEEEEEeC-----CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||++++. ++..||+|.+.... .......+.+|+.++++++|||++++.+++...+....++|
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (284)
T cd05079 10 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES---GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLI 86 (284)
T ss_pred eecCCCCceeEEEEEEccCCCCccceEEEEEcCccc---cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEE
Confidence 67999999999999852 46789999874332 12334679999999999999999999999987643368999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|||+++++|.+++.... ..++|.++..++.+++.||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 87 ~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05079 87 MEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 160 (284)
T ss_pred EEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCccccccc
Confidence 99999999999986432 3589999999999999999999998 99999999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-22 Score=198.01 Aligned_cols=145 Identities=21% Similarity=0.272 Sum_probs=125.0
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCC----CceEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSP----FTRML 437 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~----~~~~l 437 (521)
+.||+|+||.||+|... +++.||+|.+.... .....+..|+.++.++ +||||+++++++..... ...++
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~i 86 (272)
T cd06637 12 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWL 86 (272)
T ss_pred HheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEE
Confidence 68999999999999886 67889999875332 1235688999999998 79999999999875321 25799
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 438 v~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
||||+++|+|.+++.......++|..+..++.|++.||+|||+. +|+||||||+||++++++.++|+|||+++.+.
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~ 162 (272)
T cd06637 87 VMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 162 (272)
T ss_pred EEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCCCceecc
Confidence 99999999999999754445689999999999999999999998 99999999999999999999999999998654
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=2e-22 Score=195.44 Aligned_cols=143 Identities=22% Similarity=0.378 Sum_probs=127.8
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||++..+++..+|||.+..... ..+++.+|+.++++++|+||+++++++.... ..++||||++
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e~~~ 84 (261)
T cd05034 12 RKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM-----SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEE--PIYIVTEYMS 84 (261)
T ss_pred eeeccCcceEEEEEEEcCCceEEEEEecCCcc-----CHHHHHHHHHHHhhCCCCCEeeeeeeeecCC--ceEEEEeccC
Confidence 78999999999999988888899998753221 2357899999999999999999999998766 7899999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+++|.+++.......+++.++..++.+++.|++|||+. +++|+||||+||++++++.+||+|||+++.+.
T Consensus 85 ~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~ 154 (261)
T cd05034 85 KGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIE 154 (261)
T ss_pred CCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceecc
Confidence 99999999765545689999999999999999999999 99999999999999999999999999987654
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.7e-22 Score=195.42 Aligned_cols=143 Identities=23% Similarity=0.364 Sum_probs=127.2
Q ss_pred hchhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
.+.||+|+||.||+|... |+.||+|.+..... ..+++.+|+.++.+++|+||+++++++.+.+ ..++||||+
T Consensus 11 ~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~v~e~~ 82 (256)
T cd05039 11 GATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-----AAQAFLAEASVMTTLRHPNLVQLLGVVLQGN--PLYIVTEYM 82 (256)
T ss_pred eeeeecCCCceEEEEEec-CcEEEEEEeccchh-----HHHHHHHHHHHHHhcCCcceeeeEEEEcCCC--CeEEEEEec
Confidence 378999999999999875 68899998843221 3567899999999999999999999998766 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++.......++|..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++...
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~ 153 (256)
T cd05039 83 AKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEAS 153 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccccccc
Confidence 999999999765545689999999999999999999998 99999999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.5e-23 Score=209.47 Aligned_cols=134 Identities=12% Similarity=0.135 Sum_probs=119.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||++... +++.||+|... .+.+.+|+.++++++|||||++++++.... ..++|+||+
T Consensus 98 ~~lg~G~~g~V~~~~d~~~~~~vaiK~~~----------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~--~~~lv~e~~ 165 (391)
T PHA03212 98 ETFTPGAEGFAFACIDNKTCEHVVIKAGQ----------RGGTATEAHILRAINHPSIIQLKGTFTYNK--FTCLILPRY 165 (391)
T ss_pred EEEcCCCCeEEEEEEECCCCCEEEEechh----------hhhhHHHHHHHHhCCCCCCCCEeEEEEECC--eeEEEEecC
Confidence 78999999999999886 68899998642 124678999999999999999999998766 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
. ++|.+++.... .+++.++..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+..
T Consensus 166 ~-~~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~ 232 (391)
T PHA03212 166 K-TDLYCYLAAKR--NIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFP 232 (391)
T ss_pred C-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccccc
Confidence 6 69998886433 489999999999999999999998 9999999999999999999999999999753
|
|
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-22 Score=205.46 Aligned_cols=146 Identities=18% Similarity=0.235 Sum_probs=122.4
Q ss_pred hchhCcCCCeeEEEEEe------CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCce
Q 009965 363 SNIIGSSPDSLVYKGTM------KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~------~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 435 (521)
.+.||+|+||.||+|+. .+++.||||++.... .....+.+.+|+.++.++ +||||++++++|...+. ..
T Consensus 12 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~-~~ 87 (343)
T cd05103 12 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG-PL 87 (343)
T ss_pred cccccCCccceEEEEeeccCCccccceeEEEEEeccCC---ChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC-ce
Confidence 47899999999999974 246789999985322 122345688999999999 78999999999865432 57
Q ss_pred EEEEecCCCCChhhhhccCC------------------------------------------------------------
Q 009965 436 MLVFDYASNGTLYEHLHYGE------------------------------------------------------------ 455 (521)
Q Consensus 436 ~lv~ey~~~gsL~~~l~~~~------------------------------------------------------------ 455 (521)
++||||+++|+|.++++...
T Consensus 88 ~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (343)
T cd05103 88 MVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAE 167 (343)
T ss_pred EEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhh
Confidence 89999999999999986321
Q ss_pred -----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 456 -----RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 456 -----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
...++|.++.+++.|+++||+|||+. +|+||||||+|||+++++++||+|||+++.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~ 229 (343)
T cd05103 168 QEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDI 229 (343)
T ss_pred hhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEeccccccc
Confidence 12478899999999999999999998 9999999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=2e-22 Score=200.77 Aligned_cols=144 Identities=17% Similarity=0.176 Sum_probs=125.0
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. ++..+|+|.+.... ......++.+|++++.+++||||+++++++..++ ..++||||+
T Consensus 7 ~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~ey~ 81 (308)
T cd06615 7 GELGAGNGGVVTKVLHRPSGLIMARKLIHLEI---KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDG--EISICMEHM 81 (308)
T ss_pred eeccCCCCeEEEEEEEcCCCeEEEEEEecccc---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC--EEEEEeecc
Confidence 78999999999999886 57788888874321 1233456889999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.++++.. ..+++..+..++.|+++||+|||+.+ +++||||||+|||+++++.+||+|||+++.+.
T Consensus 82 ~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 151 (308)
T cd06615 82 DGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 151 (308)
T ss_pred CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCccccc
Confidence 999999999644 35899999999999999999999732 89999999999999999999999999987654
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-22 Score=204.03 Aligned_cols=142 Identities=23% Similarity=0.116 Sum_probs=119.7
Q ss_pred hCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc---CCCCccceeeEEecCCCCceEEEEec
Q 009965 366 IGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI---NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 366 ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
||+|+||+||+|+.. +++.||+|++..+... .......+..|..++.+. +||||+++++++...+ ..++||||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~--~~~lv~e~ 77 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIV-AKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDS--DLYLVTDY 77 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHh-hhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCC--eEEEEEcC
Confidence 699999999999886 6889999998543211 112233455677777665 6999999999998877 79999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
+++|+|.+++.... .+++..+..++.||++||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 78 ~~~g~L~~~l~~~~--~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~ 146 (330)
T cd05586 78 MSGGELFWHLQKEG--RFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKAN 146 (330)
T ss_pred CCCChHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCC
Confidence 99999999986433 489999999999999999999998 9999999999999999999999999998753
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.1e-22 Score=196.29 Aligned_cols=145 Identities=26% Similarity=0.331 Sum_probs=125.1
Q ss_pred hchhCcCCCeeEEEEEeC-C---CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEE
Q 009965 363 SNIIGSSPDSLVYKGTMK-G---GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~-~---~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
.+.||+|+||.||+|+.. + +..+|+|.+.... .....+.|.+|+.++.+++||||+++++++...+ ..++|
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 83 (267)
T cd05066 9 EKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY---TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSK--PVMIV 83 (267)
T ss_pred eeeecccCCCceEEEEEecCCCCceEEEEEECCCCC---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC--ccEEE
Confidence 378999999999999874 2 2368888874322 2234567999999999999999999999998776 78999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|||+++|+|.+++.... ..+++.++..|+.|++.||+|||+. +++||||||+||++++++.++++|||+++.+.
T Consensus 84 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd05066 84 TEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 157 (267)
T ss_pred EEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCcccccc
Confidence 99999999999997443 3589999999999999999999998 99999999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-22 Score=199.85 Aligned_cols=144 Identities=18% Similarity=0.316 Sum_probs=122.1
Q ss_pred chhCcCCCeeEEEEEeCC------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEE
Q 009965 364 NIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
+.||+|+||.||+|..++ +..||+|.+.... ......++.+|+.++++++||||+++++++.... ..++
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~l 86 (288)
T cd05061 12 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA---SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ--PTLV 86 (288)
T ss_pred eeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC---CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC--CcEE
Confidence 789999999999997642 4579999874221 1223456889999999999999999999998776 7899
Q ss_pred EEecCCCCChhhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCC
Q 009965 438 VFDYASNGTLYEHLHYGE--------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPL 509 (521)
Q Consensus 438 v~ey~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~Df 509 (521)
||||+++|+|.++++... ....++..+.+++.|++.||+|||+. +|+||||||+||++++++.++|+||
T Consensus 87 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~L~Df 163 (288)
T cd05061 87 VMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDF 163 (288)
T ss_pred EEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEEECcC
Confidence 999999999999996321 23457888999999999999999998 9999999999999999999999999
Q ss_pred chhhhc
Q 009965 510 CLSFLL 515 (521)
Q Consensus 510 Gla~~~ 515 (521)
|+++.+
T Consensus 164 g~~~~~ 169 (288)
T cd05061 164 GMTRDI 169 (288)
T ss_pred Cccccc
Confidence 998854
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.2e-22 Score=202.27 Aligned_cols=144 Identities=17% Similarity=0.151 Sum_probs=124.4
Q ss_pred hchhCcC--CCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEE
Q 009965 363 SNIIGSS--PDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 363 ~~~ig~G--~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
.++||+| +|++||+++.. +|..||+|++..... .....+.+.+|+.+++.++||||+++++++..++ ..++|+
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~--~~~lv~ 78 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC--TNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN--ELWVVT 78 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhc--cHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECC--EEEEEE
Confidence 3689999 67899999886 789999999854321 1233456788999999999999999999998877 899999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhh
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSF 513 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~ 513 (521)
||+++|+|.+++.......+++..+.+++.|++.||+|||+. +|+||||||+|||++.++.++++|||.+.
T Consensus 79 e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~ 149 (327)
T cd08227 79 SFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNL 149 (327)
T ss_pred eccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhh
Confidence 999999999999654444589999999999999999999998 99999999999999999999999998644
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.8e-22 Score=201.14 Aligned_cols=142 Identities=21% Similarity=0.241 Sum_probs=122.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. ++..||+|.+...... .....+.+|+.++++++||||+++++++..++ ..++||||+
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 86 (309)
T cd07872 12 EKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE---GAPCTAIREVSLLKDLKHANIVTLHDIVHTDK--SLTLVFEYL 86 (309)
T ss_pred EEecccCCEEEEEEEecCCCCeEEEEEeeccccC---CcchhHHHHHHHHHhCCCCCcceEEEEEeeCC--eEEEEEeCC
Confidence 68999999999999986 6788999988543221 22345788999999999999999999998876 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
++ +|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 87 ~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 154 (309)
T cd07872 87 DK-DLKQYMDDCG-NIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAK 154 (309)
T ss_pred CC-CHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceec
Confidence 85 8988886432 3578999999999999999999998 9999999999999999999999999998754
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-22 Score=197.58 Aligned_cols=150 Identities=19% Similarity=0.199 Sum_probs=126.6
Q ss_pred HHHHhhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC
Q 009965 356 EVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432 (521)
Q Consensus 356 ~~~~~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 432 (521)
+.+++++. ..||+|+||.||+|+.. ++..|++|.+..+. ....+.+.+|+.++++++|+||+++++++...+
T Consensus 4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~- 78 (268)
T cd06624 4 EYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD----SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENG- 78 (268)
T ss_pred ccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC----HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCC-
Confidence 33444443 68999999999999876 67789999874332 123457899999999999999999999998876
Q ss_pred CceEEEEecCCCCChhhhhccCCCCCC--CHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC-CCCeeeCCC
Q 009965 433 FTRMLVFDYASNGTLYEHLHYGERCQV--SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-DFSPKVSPL 509 (521)
Q Consensus 433 ~~~~lv~ey~~~gsL~~~l~~~~~~~l--~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~-~~~~kl~Df 509 (521)
..++|+||+++++|.++++... .++ ++..+..++.|+++||+|||+. +|+||||||+||+++. ++.++|+||
T Consensus 79 -~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~df 153 (268)
T cd06624 79 -FFKIFMEQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDF 153 (268)
T ss_pred -EEEEEEecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecc
Confidence 7899999999999999997432 234 8888999999999999999998 9999999999999986 679999999
Q ss_pred chhhhc
Q 009965 510 CLSFLL 515 (521)
Q Consensus 510 Gla~~~ 515 (521)
|++..+
T Consensus 154 g~~~~~ 159 (268)
T cd06624 154 GTSKRL 159 (268)
T ss_pred hhheec
Confidence 998765
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.6e-22 Score=203.99 Aligned_cols=145 Identities=19% Similarity=0.247 Sum_probs=122.1
Q ss_pred chhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceE
Q 009965 364 NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 436 (521)
+.||+|+||.||+|+.. +++.||+|++..... ....+.+.+|+.++.++ +|+||++++++|..... ..+
T Consensus 13 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~-~~~ 88 (337)
T cd05054 13 KPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT---ASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG-PLM 88 (337)
T ss_pred cccccCcCceEEeccccccccccccceeeeeeccCCCC---HHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC-CEE
Confidence 78999999999999653 246899998743211 12345678899999999 89999999999875432 688
Q ss_pred EEEecCCCCChhhhhccCC-----------------------------------------------------------CC
Q 009965 437 LVFDYASNGTLYEHLHYGE-----------------------------------------------------------RC 457 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~-----------------------------------------------------------~~ 457 (521)
+++||+++|+|.+++.... ..
T Consensus 89 ~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (337)
T cd05054 89 VIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKE 168 (337)
T ss_pred EEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhc
Confidence 9999999999999985321 12
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 458 QVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 458 ~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
+++|..+.+++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.+
T Consensus 169 ~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~ 223 (337)
T cd05054 169 PLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDI 223 (337)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhc
Confidence 689999999999999999999998 9999999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.6e-22 Score=195.40 Aligned_cols=147 Identities=20% Similarity=0.245 Sum_probs=127.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. ++..||||.+.... .........+.+|+++++.++||||+++++++.+.+ ..++|+||+
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e~~ 84 (267)
T cd08228 8 KKIGRGQFSEVYRATCLLDRKPVALKKVQIFE-MMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDN--ELNIVLELA 84 (267)
T ss_pred eeeccCCCeeEEEEEEeCCCCEEEEEEeeccc-cCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECC--eEEEEEEec
Confidence 78999999999999986 78899999875432 222344567899999999999999999999998776 789999999
Q ss_pred CCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.. .....+++..+..++.|+++||+|||+. +++||||||+||+++.++.++|+|||+++.+.
T Consensus 85 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~ 157 (267)
T cd08228 85 DAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred CCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceecc
Confidence 99999998852 2234578999999999999999999998 99999999999999999999999999987654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.9e-22 Score=195.14 Aligned_cols=142 Identities=18% Similarity=0.210 Sum_probs=124.9
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
..||+|+||.||+|+.. +++.||+|++..+.. .....+.+|+.++.+++||||+++++++...+ ..++|+||+
T Consensus 15 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~----~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~--~~~iv~e~~ 88 (267)
T cd06646 15 QRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG----DDFSLIQQEIFMVKECKHCNIVAYFGSYLSRE--KLWICMEYC 88 (267)
T ss_pred heeecCCCeEEEEEEECCCCeEEEEEEEecCcc----chHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC--EEEEEEeCC
Confidence 68999999999999985 678899998854321 12345788999999999999999999998776 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.++++... ++++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 89 ~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06646 89 GGGSLQDIYHVTG--PLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKIT 157 (267)
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeec
Confidence 9999999986433 589999999999999999999998 99999999999999999999999999988654
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=2e-22 Score=199.52 Aligned_cols=145 Identities=23% Similarity=0.306 Sum_probs=123.2
Q ss_pred chhCcCCCeeEEEEEeCC---------------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEe
Q 009965 364 NIIGSSPDSLVYKGTMKG---------------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCR 428 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~---------------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~ 428 (521)
+.||+|+||.||+++..+ ...||+|.+... ........|.+|++++.+++|||++++++++.
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~ 87 (295)
T cd05097 11 EKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRAD---VTKTARNDFLKEIKIMSRLKNPNIIRLLGVCV 87 (295)
T ss_pred hccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCC---CCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEc
Confidence 789999999999997643 124888887432 12234567999999999999999999999998
Q ss_pred cCCCCceEEEEecCCCCChhhhhccCC----------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee
Q 009965 429 ESSPFTRMLVFDYASNGTLYEHLHYGE----------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL 498 (521)
Q Consensus 429 ~~~~~~~~lv~ey~~~gsL~~~l~~~~----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLl 498 (521)
..+ ..++||||+++++|.+++.... ...++|.++.+++.+++.||+|||+. +++||||||+||++
T Consensus 88 ~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nill 162 (295)
T cd05097 88 SDD--PLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNCLV 162 (295)
T ss_pred CCC--ccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhEEE
Confidence 776 7899999999999999986321 12478999999999999999999998 99999999999999
Q ss_pred cCCCCeeeCCCchhhhcc
Q 009965 499 TEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 499 d~~~~~kl~DfGla~~~~ 516 (521)
++++.+||+|||+++.+.
T Consensus 163 ~~~~~~kl~dfg~~~~~~ 180 (295)
T cd05097 163 GNHYTIKIADFGMSRNLY 180 (295)
T ss_pred cCCCcEEecccccccccc
Confidence 999999999999997653
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.1e-22 Score=196.68 Aligned_cols=144 Identities=25% Similarity=0.423 Sum_probs=123.8
Q ss_pred chhCcCCCeeEEEEEeCC-C-----CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEE
Q 009965 364 NIIGSSPDSLVYKGTMKG-G-----PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~-~-----~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
+.||+|+||.||+|...+ + ..||+|.+.... .....++|.+|+.++.+++||||+++++++.... ..++
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~---~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~--~~~~ 85 (283)
T cd05048 11 EELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA---EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQ--PTCM 85 (283)
T ss_pred hcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC---CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCC--ceEE
Confidence 789999999999998753 2 468888874321 2234567999999999999999999999998776 7899
Q ss_pred EEecCCCCChhhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCC
Q 009965 438 VFDYASNGTLYEHLHYGER--------------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503 (521)
Q Consensus 438 v~ey~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~ 503 (521)
+|||+++|+|.+++..... ..+++.++..++.|++.||+|||+. +++||||||+||++++++.
T Consensus 86 ~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~~~ 162 (283)
T cd05048 86 LFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEGLT 162 (283)
T ss_pred EEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCCCc
Confidence 9999999999999964311 4588999999999999999999998 9999999999999999999
Q ss_pred eeeCCCchhhhc
Q 009965 504 PKVSPLCLSFLL 515 (521)
Q Consensus 504 ~kl~DfGla~~~ 515 (521)
+||+|||+++..
T Consensus 163 ~~L~dfg~~~~~ 174 (283)
T cd05048 163 VKISDFGLSRDI 174 (283)
T ss_pred EEECCCcceeec
Confidence 999999998764
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.3e-22 Score=197.68 Aligned_cols=145 Identities=26% Similarity=0.339 Sum_probs=124.2
Q ss_pred chhCcCCCeeEEEEEeCC------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEE
Q 009965 364 NIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
+.||+|+||.||+|+..+ +..||+|.+..+. .....+.|.+|+.++..++||||+++++++.... ..++
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~--~~~~ 85 (283)
T cd05091 11 EELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA---EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQ--PLSM 85 (283)
T ss_pred HHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC---CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCC--ceEE
Confidence 789999999999998742 4679999885332 1233467899999999999999999999998876 7899
Q ss_pred EEecCCCCChhhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCC
Q 009965 438 VFDYASNGTLYEHLHYG--------------ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503 (521)
Q Consensus 438 v~ey~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~ 503 (521)
++||+++++|.+++..+ ....+++..+.+++.|++.||+|+|+. +|+||||||+||++++++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCCCc
Confidence 99999999999998521 123488999999999999999999998 9999999999999999999
Q ss_pred eeeCCCchhhhcc
Q 009965 504 PKVSPLCLSFLLV 516 (521)
Q Consensus 504 ~kl~DfGla~~~~ 516 (521)
+||+|||+++.+.
T Consensus 163 ~kl~Dfg~~~~~~ 175 (283)
T cd05091 163 VKISDLGLFREVY 175 (283)
T ss_pred eEecccccccccc
Confidence 9999999988653
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.6e-22 Score=193.30 Aligned_cols=142 Identities=23% Similarity=0.310 Sum_probs=123.1
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||++..+ +..+|+|.+... ...+.|.+|+.++++++|+|++++++++...+. ..++|+||++
T Consensus 12 ~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~-~~~lv~e~~~ 83 (256)
T cd05082 12 QTIGKGEFGDVMLGDYR-GNKVAVKCIKND------ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMA 83 (256)
T ss_pred eeecccCCCeEEEEEEc-CCcEEEEEeCCC------chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCC-ceEEEEECCC
Confidence 78999999999999775 567899986321 124578999999999999999999998754331 6899999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+|+|.++++......++|..+.+++.+++.||+|||+. +++||||||+||++++++.+||+|||+++...
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~ 153 (256)
T cd05082 84 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 153 (256)
T ss_pred CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceecc
Confidence 99999999765555689999999999999999999998 99999999999999999999999999988643
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.9e-22 Score=194.84 Aligned_cols=142 Identities=15% Similarity=0.259 Sum_probs=118.8
Q ss_pred chhCcCCCeeEEEEEeCC-------------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecC
Q 009965 364 NIIGSSPDSLVYKGTMKG-------------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~-------------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 430 (521)
+.||+|+||.||+|+..+ ...|++|.+.... ......|.+|+.++..++||||+++++++...
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~ 76 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH----RDISLAFFETASMMRQVSHKHIVLLYGVCVRD 76 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh----hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 368999999999998642 1247777763321 23345788999999999999999999999877
Q ss_pred CCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCC-------
Q 009965 431 SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS------- 503 (521)
Q Consensus 431 ~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~------- 503 (521)
. ..++||||+++|+|..+++... ..+++..+.+++.|+++||+|||+. +|+||||||+|||++.++.
T Consensus 77 ~--~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~ 150 (262)
T cd05077 77 V--ENIMVEEFVEFGPLDLFMHRKS-DVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPF 150 (262)
T ss_pred C--CCEEEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCce
Confidence 6 7899999999999999886432 3589999999999999999999998 9999999999999987664
Q ss_pred eeeCCCchhhhc
Q 009965 504 PKVSPLCLSFLL 515 (521)
Q Consensus 504 ~kl~DfGla~~~ 515 (521)
++++|||++..+
T Consensus 151 ~~l~d~g~~~~~ 162 (262)
T cd05077 151 IKLSDPGIPITV 162 (262)
T ss_pred eEeCCCCCCccc
Confidence 899999998754
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.9e-22 Score=199.17 Aligned_cols=144 Identities=24% Similarity=0.368 Sum_probs=121.7
Q ss_pred hchhCcCCCeeEEEEEeC-CCCE--EEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEE
Q 009965 363 SNIIGSSPDSLVYKGTMK-GGPE--IAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~-~~~~--vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv 438 (521)
.+.||+|+||.||+|..+ ++.. +++|.+.. .......+++.+|++++.++ +||||+++++++...+ ..++|
T Consensus 12 ~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~---~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~--~~~lv 86 (303)
T cd05088 12 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE---YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG--YLYLA 86 (303)
T ss_pred eeeecCCCCceEEEEEEccCCceeeEEEEEecc---cCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCC--CceEE
Confidence 378999999999999985 4543 56665532 11223456789999999999 8999999999998876 78999
Q ss_pred EecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCe
Q 009965 439 FDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSP 504 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~ 504 (521)
+||+++|+|.++++... ...+++.++..++.|++.|++|||+. +++||||||+|||+++++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCCcE
Confidence 99999999999996432 12578999999999999999999998 99999999999999999999
Q ss_pred eeCCCchhhh
Q 009965 505 KVSPLCLSFL 514 (521)
Q Consensus 505 kl~DfGla~~ 514 (521)
||+|||+++.
T Consensus 164 kl~dfg~~~~ 173 (303)
T cd05088 164 KIADFGLSRG 173 (303)
T ss_pred EeCccccCcc
Confidence 9999999863
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.5e-22 Score=194.71 Aligned_cols=145 Identities=25% Similarity=0.356 Sum_probs=125.4
Q ss_pred hchhCcCCCeeEEEEEeC-CCC---EEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEE
Q 009965 363 SNIIGSSPDSLVYKGTMK-GGP---EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~-~~~---~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
.+.||+|+||.||+|+.. ++. .+|+|.+.... .....+++..|++++.+++|||++++.+++...+ ..++|
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 84 (268)
T cd05063 10 QKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY---TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFK--PAMII 84 (268)
T ss_pred eeEecCCCCccEEEEEEecCCCCceEEEEEeccccC---CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCC--CcEEE
Confidence 378999999999999885 333 68888874332 1233567899999999999999999999998777 78999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|||+++|+|.++++... ..++|.++..++.|++.|++|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 85 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 158 (268)
T cd05063 85 TEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVLE 158 (268)
T ss_pred EEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceecc
Confidence 99999999999996433 3589999999999999999999998 99999999999999999999999999987654
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.5e-22 Score=199.51 Aligned_cols=145 Identities=19% Similarity=0.262 Sum_probs=125.0
Q ss_pred chhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceE
Q 009965 364 NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 436 (521)
+.||+|+||.||++... ++..+|+|.+..... ....+.+.+|+.+++++ +||||+++++++...+ ..+
T Consensus 41 ~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~--~~~ 115 (302)
T cd05055 41 KTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH---SSEREALMSELKIMSHLGNHENIVNLLGACTIGG--PIL 115 (302)
T ss_pred ceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC---hHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC--ceE
Confidence 78999999999999752 345799998743221 23345789999999999 7999999999998776 789
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+||||+++|+|.++++......+++.++..++.+++.||+|||+. +|+|+||||+|||+++++.++++|||+++.+.
T Consensus 116 lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 192 (302)
T cd05055 116 VITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGLARDIM 192 (302)
T ss_pred EEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCccccccc
Confidence 999999999999999754444589999999999999999999998 99999999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.88 E-value=2e-22 Score=199.08 Aligned_cols=145 Identities=23% Similarity=0.289 Sum_probs=124.6
Q ss_pred chhCcCCCeeEEEEEeCC------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceE
Q 009965 364 NIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 436 (521)
+.||+|+||.||++...+ ...+|+|.+.... ......++.+|+.++.++ +|+||+++++++...+ ..+
T Consensus 18 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~--~~~ 92 (293)
T cd05053 18 KPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG--PLY 92 (293)
T ss_pred eEecccccccEEEEEEecCCCCCCceeEEEEEccCCC---CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC--CeE
Confidence 789999999999998742 3578998874321 123345688999999999 8999999999998776 789
Q ss_pred EEEecCCCCChhhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCC
Q 009965 437 LVFDYASNGTLYEHLHYG--------------ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF 502 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~ 502 (521)
++|||+++|+|.++++.. ....++|..+.+++.|++.||+|||+. +|+||||||+||++++++
T Consensus 93 li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~~~~~ 169 (293)
T cd05053 93 VVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLVTEDH 169 (293)
T ss_pred EEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEEcCCC
Confidence 999999999999998632 234689999999999999999999998 999999999999999999
Q ss_pred CeeeCCCchhhhcc
Q 009965 503 SPKVSPLCLSFLLV 516 (521)
Q Consensus 503 ~~kl~DfGla~~~~ 516 (521)
.+||+|||+++.+.
T Consensus 170 ~~kL~Dfg~~~~~~ 183 (293)
T cd05053 170 VMKIADFGLARDIH 183 (293)
T ss_pred eEEeCccccccccc
Confidence 99999999998764
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.6e-22 Score=194.30 Aligned_cols=145 Identities=23% Similarity=0.293 Sum_probs=125.6
Q ss_pred chhCcCCCeeEEEEEeCC--C--CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMKG--G--PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~--~--~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
++||+|++|.||+|.+.+ + ..||+|.+...... ...++|.+|+.++++++||||+++++++.. . ..++|+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~--~~~~v~ 74 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS---DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-H--PLMMVT 74 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH---HHHHHHHHHHHHHhhcCCCCccceeEEEcC-C--eEEEEE
Confidence 468999999999998753 3 26899987543221 456789999999999999999999999987 4 789999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
||+++|+|.+++.......++|.....++.|+++||+|||+. +++||||||+||+++.++.+||+|||+++.+..
T Consensus 75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~ 149 (257)
T cd05040 75 ELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQ 149 (257)
T ss_pred EecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccc
Confidence 999999999999754434689999999999999999999998 999999999999999999999999999987643
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.3e-22 Score=195.03 Aligned_cols=146 Identities=25% Similarity=0.341 Sum_probs=126.1
Q ss_pred hhchhCcCCCeeEEEEEeC-CC---CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEE
Q 009965 362 FSNIIGSSPDSLVYKGTMK-GG---PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 362 ~~~~ig~G~~g~Vy~~~~~-~~---~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
+.+.||+|+||.||+|... ++ ..||+|.+.... .....++|..|+.++++++||||+++++++.+.. ..++
T Consensus 8 ~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~--~~~l 82 (269)
T cd05065 8 IEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY---TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSR--PVMI 82 (269)
T ss_pred EEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC---CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCC--ceEE
Confidence 3478999999999999886 33 369999874321 2334567999999999999999999999998776 7899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 438 v~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
||||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 83 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~ 157 (269)
T cd05065 83 ITEFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 157 (269)
T ss_pred EEecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCccccccc
Confidence 999999999999996433 3589999999999999999999998 99999999999999999999999999987654
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.5e-24 Score=219.10 Aligned_cols=145 Identities=23% Similarity=0.309 Sum_probs=126.7
Q ss_pred chhCcCCCeeEEEEEe-CCC----CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEE
Q 009965 364 NIIGSSPDSLVYKGTM-KGG----PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~-~~~----~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
.+||+|+||+||||.+ ++| .+||+|.+... ...+...++..|+-+|++++|||+++++|+|..+. ..||
T Consensus 702 kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~---t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~---~qlv 775 (1177)
T KOG1025|consen 702 KVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEF---TSPKASIELLDEALRMASLDHPNLLRLLGVCMLST---LQLV 775 (1177)
T ss_pred ceeccccceeEEeeeEecCCceecceeEEEEeecc---CCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch---HHHH
Confidence 7899999999999977 344 36888877432 23345678999999999999999999999998764 7899
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcccc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~~ 518 (521)
++||+.|+|.+|++.+. ..+.-...+.|..|||+||.|||.+ ++|||||.++|||+.+-..+||.|||+|+++.+.
T Consensus 776 tq~mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d 851 (1177)
T KOG1025|consen 776 TQLMPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD 851 (1177)
T ss_pred HHhcccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence 99999999999998543 4688889999999999999999998 9999999999999999999999999999998754
|
|
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.8e-22 Score=196.58 Aligned_cols=145 Identities=23% Similarity=0.363 Sum_probs=125.6
Q ss_pred hchhCcCCCeeEEEEEeCC------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceE
Q 009965 363 SNIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
.+.||+|+||.||+|+..+ +..||+|.+.... .....+.|.+|++++.+++||||+++++++.... ..+
T Consensus 10 ~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~ 84 (280)
T cd05049 10 KRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA---SNDARKDFEREAELLTNFQHENIVKFYGVCTEGD--PPI 84 (280)
T ss_pred HhhccccCCceEeeeeeccccCcCCcceEEEEeecccC---CHHHHHHHHHHHHHHHhcCCCCchheeeEEecCC--CeE
Confidence 3789999999999998743 4689999874322 1224568999999999999999999999998876 799
Q ss_pred EEEecCCCCChhhhhccCC------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCe
Q 009965 437 LVFDYASNGTLYEHLHYGE------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSP 504 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~ 504 (521)
+||||+++|+|.++++... ...+++.++..++.+++.|++|||+. +++||||||+||++++++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCCeE
Confidence 9999999999999996432 23588999999999999999999998 99999999999999999999
Q ss_pred eeCCCchhhhc
Q 009965 505 KVSPLCLSFLL 515 (521)
Q Consensus 505 kl~DfGla~~~ 515 (521)
||+|||+++.+
T Consensus 162 kl~d~g~~~~~ 172 (280)
T cd05049 162 KIGDFGMSRDV 172 (280)
T ss_pred EECCcccceec
Confidence 99999998754
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.7e-22 Score=194.06 Aligned_cols=149 Identities=25% Similarity=0.347 Sum_probs=124.4
Q ss_pred hchhCcCCCeeEEEEEeCC----CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC----Cc
Q 009965 363 SNIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FT 434 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~----~~ 434 (521)
.+.||+|+||.||+|+... +..||+|++..... .......+.+|++.+..++||||+++++++..... ..
T Consensus 4 ~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 81 (273)
T cd05035 4 GKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH--TYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPK 81 (273)
T ss_pred ccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC--CHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcc
Confidence 3689999999999998752 36799998854321 12334578999999999999999999999865441 13
Q ss_pred eEEEEecCCCCChhhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCc
Q 009965 435 RMLVFDYASNGTLYEHLHYG----ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLC 510 (521)
Q Consensus 435 ~~lv~ey~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfG 510 (521)
.++++||+++|+|.+++... ....+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||
T Consensus 82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg 158 (273)
T cd05035 82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADFG 158 (273)
T ss_pred cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCcc
Confidence 68999999999999998532 224589999999999999999999998 99999999999999999999999999
Q ss_pred hhhhcc
Q 009965 511 LSFLLV 516 (521)
Q Consensus 511 la~~~~ 516 (521)
+++.+.
T Consensus 159 ~~~~~~ 164 (273)
T cd05035 159 LSKKIY 164 (273)
T ss_pred ceeecc
Confidence 998654
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.9e-22 Score=194.15 Aligned_cols=147 Identities=19% Similarity=0.228 Sum_probs=127.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||++... ++..+|||.+.... .......+++.+|+.++..++||||+++++++...+ ..+++|||+
T Consensus 8 ~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~-~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~~v~e~~ 84 (267)
T cd08229 8 KKIGRGQFSEVYRATCLLDGVPVALKKVQIFD-LMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN--ELNIVLELA 84 (267)
T ss_pred hhhcccCCeEEEEEeecCCCceEEEEeeeehh-hhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCC--eEEEEEEec
Confidence 78999999999999975 78899999875432 122334567899999999999999999999998776 789999999
Q ss_pred CCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++.. .....++|.++..++.++++||+|||+. +++|+||||+||+++.++.++|+|||+++.+.
T Consensus 85 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd08229 85 DAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred CCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhccc
Confidence 99999999863 2234689999999999999999999998 99999999999999999999999999987654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.5e-22 Score=192.49 Aligned_cols=146 Identities=14% Similarity=0.147 Sum_probs=128.5
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
++||+|+||.||.++.. ++..+++|.+...... ....+++.+|+.++++++|+||+++++++.+.+ ..+++|||+
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~~~~e~~ 81 (256)
T cd08221 6 RVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLS--EKERRDALNEIVILSLLQHPNIIAYYNHFMDDN--TLLIEMEYA 81 (256)
T ss_pred eEecccCCceEEEEEEcCCCcEEEEEEEeecccc--hhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCC--eEEEEEEec
Confidence 78999999999999875 6889999988544322 234567899999999999999999999998876 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.......+++.++..++.|+++||+|||+. +++||||||+||++++++.+||+|||+++...
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~ 152 (256)
T cd08221 82 NGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILG 152 (256)
T ss_pred CCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEcc
Confidence 999999999755445689999999999999999999998 99999999999999999999999999988653
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-23 Score=194.72 Aligned_cols=142 Identities=16% Similarity=0.217 Sum_probs=128.2
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
.++|+|+||.|||+.++ .|+.+|+|.+.+.. ..+++.+|+.+++..+.|++|+++|.|.... ..|+|||||
T Consensus 39 ~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s------DLQEIIKEISIMQQC~S~yVVKYYGSYFK~s--DLWIVMEYC 110 (502)
T KOG0574|consen 39 GKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT------DLQEIIKEISIMQQCKSKYVVKYYGSYFKHS--DLWIVMEYC 110 (502)
T ss_pred HHhcCCcchHHHHHHHhccCcEEEEEecCccc------hHHHHHHHHHHHHHcCCchhhhhhhhhccCC--ceEeehhhc
Confidence 78999999999999886 79999999986543 2467999999999999999999999887665 699999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
.-|++.+.++- .+.+|.+.++..|.+...+||+|||.. .-+|||||+.|||++.+|.+|++|||.|-.+.+
T Consensus 111 GAGSiSDI~R~-R~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTD 181 (502)
T KOG0574|consen 111 GAGSISDIMRA-RRKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTD 181 (502)
T ss_pred CCCcHHHHHHH-hcCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhh
Confidence 99999999974 345799999999999999999999998 899999999999999999999999999987654
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.5e-22 Score=219.37 Aligned_cols=145 Identities=19% Similarity=0.159 Sum_probs=127.3
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|++..... ........+.+|+.++..++||||+++++++.... ..++||||+
T Consensus 10 ~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~-~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~--~~~lVmEy~ 86 (669)
T cd05610 10 KPISRGAFGKVYLGRKKNNSKLYAVKVVKKADM-INKNMVHQVQAERDALALSKSPFIVHLYYSLQSAN--NVYLVMEYL 86 (669)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEehhhc-cCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECC--EEEEEEeCC
Confidence 78999999999999987 688999999854321 22334567899999999999999999999988776 799999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.++++... .+++.....|+.||+.||+|||.. +|+||||||+|||++.++.+||+|||+++...
T Consensus 87 ~g~~L~~li~~~~--~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~~~~ 155 (669)
T cd05610 87 IGGDVKSLLHIYG--YFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSKVTL 155 (669)
T ss_pred CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCcccc
Confidence 9999999996433 488999999999999999999998 99999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.4e-22 Score=207.14 Aligned_cols=142 Identities=17% Similarity=0.162 Sum_probs=123.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
.+||+|+||+|+.+.++ +++.+|||.+++.. .-.+...+..+.|.+++.-. +||-++.++..+.... +.|.||||
T Consensus 374 ~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~-Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~--~l~fvmey 450 (694)
T KOG0694|consen 374 AVLGRGSFGKVLLAELKGTNEYYAIKVLKKGD-ILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE--HLFFVMEY 450 (694)
T ss_pred EEeccCcCceEEEEEEcCCCcEEEEEEeeccc-eeccccHHHHHHHHHHHHHhccCCeEeecccccccCC--eEEEEEEe
Confidence 89999999999999997 67899999985443 22334455778888888877 6999999999999887 89999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
+.+|++..+.+. ..+++++..-+|..|+-||.|||+. +||+||||..|||||.+|.+||+|||++|.
T Consensus 451 ~~Ggdm~~~~~~---~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe 517 (694)
T KOG0694|consen 451 VAGGDLMHHIHT---DVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKE 517 (694)
T ss_pred cCCCcEEEEEec---ccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccc
Confidence 999996555542 3489999999999999999999999 999999999999999999999999999985
|
|
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.6e-22 Score=193.57 Aligned_cols=148 Identities=18% Similarity=0.175 Sum_probs=125.2
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccc-cchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH-WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~-~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|... ++..||+|.+...... ......+.+.+|+.++.+++||||+++++++.+......+++|||
T Consensus 8 ~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~ 87 (265)
T cd06652 8 KLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEH 87 (265)
T ss_pred eEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEEe
Confidence 78999999999999886 5889999987533221 112234578899999999999999999998876443367899999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+++|+|.+++.... .+++....+++.+++.||+|||+. +++|+||||+||++++++.++|+|||+++.+.
T Consensus 88 ~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~ 157 (265)
T cd06652 88 MPGGSIKDQLKSYG--ALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKRLQ 157 (265)
T ss_pred cCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCccccccc
Confidence 99999999986433 478889999999999999999998 99999999999999999999999999987543
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.1e-22 Score=192.32 Aligned_cols=142 Identities=25% Similarity=0.324 Sum_probs=122.7
Q ss_pred chhCcCCCeeEEEEEeCC----CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
++||+|+||.||+|++.. +..+|+|.+...... ...+++.+|+.+++.++||||+++++++... ..++||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~~v~ 74 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA---AGKKEFLREASVMAQLDHPCIVRLIGVCKGE---PLMLVM 74 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch---HHHHHHHHHHHHHHhcCCCCeeeEEEEEcCC---ceEEEE
Confidence 469999999999998742 268999987533221 3456799999999999999999999998644 579999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
||+++|+|.+++.... .++|..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 75 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~ 146 (257)
T cd05060 75 ELAPLGPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALG 146 (257)
T ss_pred EeCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceee
Confidence 9999999999997544 589999999999999999999998 99999999999999999999999999998664
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.4e-23 Score=206.88 Aligned_cols=147 Identities=18% Similarity=0.211 Sum_probs=126.9
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
..||+|+||.||-++.. +...||||++.-..++ .....+++.+|++.|.+++|||+|.+-|+|.... ..|||||||
T Consensus 32 rEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQ-s~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~--TaWLVMEYC 108 (948)
T KOG0577|consen 32 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ-SNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREH--TAWLVMEYC 108 (948)
T ss_pred HHhcCCccceeEEeeccCccceeeeeeccccccc-cHHHHHHHHHHHHHHHhccCCCcccccceeeccc--hHHHHHHHH
Confidence 57999999999999986 6788999998544333 2234568999999999999999999999998877 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~~ 518 (521)
-+ +-.|.+.- ...++.+-.+..|..|+.+||+|||+. +.||||||+.|||+++.|.+|++|||-|.++.+.
T Consensus 109 lG-SAsDlleV-hkKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA 179 (948)
T KOG0577|consen 109 LG-SASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA 179 (948)
T ss_pred hc-cHHHHHHH-HhccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCch
Confidence 64 77777742 234688999999999999999999999 9999999999999999999999999999887653
|
|
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.8e-22 Score=202.19 Aligned_cols=145 Identities=21% Similarity=0.239 Sum_probs=128.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|.||.||+++.+ +|+.+|+|.+.++... .......+.+|+.+|+++. |||||.+.+.+++.. ..++|||+
T Consensus 41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~-~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~--~~~lvmEL 117 (382)
T KOG0032|consen 41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLR-GKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPD--SVYLVMEL 117 (382)
T ss_pred hhhCCCCceEEEEEEecCCCceeEEEEeehhhcc-ccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCC--eEEEEEEe
Confidence 78999999999999998 5999999998654322 2224567899999999998 999999999999988 89999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCC----CCeeeCCCchhhhccc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED----FSPKVSPLCLSFLLVS 517 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~----~~~kl~DfGla~~~~~ 517 (521)
+.+|.|.+.+... .+++.....++.+++.|+.|||+. +|+|||+||+|+|+... +.+|++|||+|+....
T Consensus 118 ~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~ 191 (382)
T KOG0032|consen 118 CEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP 191 (382)
T ss_pred cCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC
Confidence 9999999999755 289999999999999999999998 99999999999999633 5799999999998765
|
|
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.2e-22 Score=195.78 Aligned_cols=144 Identities=22% Similarity=0.333 Sum_probs=123.7
Q ss_pred hchhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceE
Q 009965 363 SNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
.+.||+|+||.||++... ++..+|+|.+... .....+.+.+|+.++.+++||||+++++++...+ ..+
T Consensus 10 ~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~ 83 (288)
T cd05093 10 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA----SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD--PLI 83 (288)
T ss_pred ccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc----CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC--ccE
Confidence 378999999999999752 3456888877432 1234567999999999999999999999998776 789
Q ss_pred EEEecCCCCChhhhhccCC-----------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCee
Q 009965 437 LVFDYASNGTLYEHLHYGE-----------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPK 505 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~k 505 (521)
+||||+++|+|.++++... ...++|.++..++.|++.||+|||+. +++||||||+||++++++.+|
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcEE
Confidence 9999999999999986322 23489999999999999999999998 999999999999999999999
Q ss_pred eCCCchhhhc
Q 009965 506 VSPLCLSFLL 515 (521)
Q Consensus 506 l~DfGla~~~ 515 (521)
|+|||+++.+
T Consensus 161 l~dfg~~~~~ 170 (288)
T cd05093 161 IGDFGMSRDV 170 (288)
T ss_pred eccCCccccc
Confidence 9999999855
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.1e-22 Score=194.95 Aligned_cols=139 Identities=17% Similarity=0.173 Sum_probs=122.3
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
++||+|+||.||+|+.. ++..+|+|.+.... .....+++.+|+.++.+++||||+++++++...+ ..++||||+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 81 (279)
T cd06619 7 EILGHGNGGTVYKAYHLLTRRILAVKVIPLDI---TVELQKQIMSELEILYKCDSPYIIGFYGAFFVEN--RISICTEFM 81 (279)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecCC---ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECC--EEEEEEecC
Confidence 68999999999999875 68899999875321 2234467999999999999999999999998877 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|..+. .+++.....++.|++.||+|||+. +|+|+||||+||+++.++.++|+|||+++.+.
T Consensus 82 ~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~ 146 (279)
T cd06619 82 DGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLV 146 (279)
T ss_pred CCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceecc
Confidence 999997653 368889999999999999999998 99999999999999999999999999997654
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.2e-22 Score=204.79 Aligned_cols=145 Identities=17% Similarity=0.130 Sum_probs=122.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC---CceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP---FTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~---~~~~lv~ 439 (521)
+.||+|+||.||+++.. +++.||+|++..... .....+++.+|++++..++||||+++++++..... ...++|+
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 83 (372)
T cd07853 6 RPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQ--NLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVT 83 (372)
T ss_pred ceeeeCCCEEEEEEEECCCCCEEEEEecccccc--chHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEe
Confidence 68999999999999985 789999998743221 12234578899999999999999999999975431 1579999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
||++ ++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++...
T Consensus 84 e~~~-~~l~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~ 154 (372)
T cd07853 84 ELMQ-SDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARVEE 154 (372)
T ss_pred eccc-cCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceeecc
Confidence 9997 5888888543 3589999999999999999999998 99999999999999999999999999998643
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.9e-22 Score=194.45 Aligned_cols=143 Identities=14% Similarity=0.261 Sum_probs=125.7
Q ss_pred hchhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
.+.||+|+||.||++...++..+|+|.+.... ...+.|.+|+.++++++|+||+++.+++.. . ..+++|||+
T Consensus 11 ~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~--~~~~v~e~~ 82 (260)
T cd05073 11 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-----MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-E--PIYIITEFM 82 (260)
T ss_pred EeEecCccceEEEEEEecCCccEEEEecCCCh-----hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-C--CeEEEEEeC
Confidence 47899999999999998877889999874321 224578999999999999999999999877 4 689999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.......++|.++..++.+++.||+|||+. +++||||||+||+++.++.+||+|||+++.+.
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 153 (260)
T cd05073 83 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIE 153 (260)
T ss_pred CCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeecc
Confidence 999999999755445689999999999999999999998 99999999999999999999999999987654
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.5e-22 Score=193.16 Aligned_cols=146 Identities=19% Similarity=0.221 Sum_probs=126.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccc-cchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH-WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~-~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|++|.||++... +++.+|+|.+...... ......+.+.+|++++.+++||||+++++++.... ..++|+||
T Consensus 8 ~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~v~e~ 85 (263)
T cd06625 8 KLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDE--TLSIFMEY 85 (263)
T ss_pred ceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCC--eEEEEEEE
Confidence 78999999999999875 6889999987543321 11223457889999999999999999999998877 89999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+++++|.+++.... .+++..+.+++.+++.||+|||+. +++||||||+||++++++.++|+|||+++.+.
T Consensus 86 ~~~~~l~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~ 155 (263)
T cd06625 86 MPGGSVKDQLKAYG--ALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 155 (263)
T ss_pred CCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence 99999999986433 488999999999999999999998 99999999999999999999999999987543
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.5e-22 Score=199.00 Aligned_cols=143 Identities=20% Similarity=0.273 Sum_probs=118.7
Q ss_pred chhCcCCCeeEEEEEeC---CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEe
Q 009965 364 NIIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
..||+|+||+||+|+.. +++.+|+|.+.... ....+.+|+.++.+++||||+++++++........++|+|
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07868 7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG------ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 80 (317)
T ss_pred cccccCCCeEEEEEEEccCCCCceEEEEEECCCC------CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEe
Confidence 68999999999999875 45789999874321 1235788999999999999999999986544346899999
Q ss_pred cCCCCChhhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee----cCCCCeeeCCC
Q 009965 441 YASNGTLYEHLHYG-------ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL----TEDFSPKVSPL 509 (521)
Q Consensus 441 y~~~gsL~~~l~~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLl----d~~~~~kl~Df 509 (521)
|+++ +|.+++... ....+++..+..|+.|++.||+|||+. +|+||||||+|||+ +.++.+||+||
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07868 81 YAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred ccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeec
Confidence 9975 888887521 123588999999999999999999999 99999999999999 45679999999
Q ss_pred chhhhcc
Q 009965 510 CLSFLLV 516 (521)
Q Consensus 510 Gla~~~~ 516 (521)
|+++.+.
T Consensus 157 G~a~~~~ 163 (317)
T cd07868 157 GFARLFN 163 (317)
T ss_pred CceeccC
Confidence 9998764
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.1e-22 Score=193.21 Aligned_cols=145 Identities=21% Similarity=0.238 Sum_probs=126.8
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccc--cchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEH--WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|...+++.+|+|.+..+... ......+.+.+|++++++++|+||+++++++.+.+ ..++|+||
T Consensus 6 ~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~e~ 83 (265)
T cd06631 6 EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDN--TISIFMEF 83 (265)
T ss_pred ceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCC--eEEEEEec
Confidence 679999999999999888899999988544321 11223356889999999999999999999998876 89999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
+++|+|.+++.... ++++..+..++.|++.||+|||+. +++|+||||+||++++++.++|+|||+++..
T Consensus 84 ~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 152 (265)
T cd06631 84 VPGGSISSILNRFG--PLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRL 152 (265)
T ss_pred CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhh
Confidence 99999999996433 488999999999999999999998 9999999999999999999999999998865
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.3e-22 Score=197.23 Aligned_cols=146 Identities=21% Similarity=0.248 Sum_probs=126.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccc-cchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH-WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~-~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|++|.||+|... +++.||+|.+...... ........+..|++++.+++|+||+++++++.+.+ ..++||||
T Consensus 6 ~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~lv~e~ 83 (298)
T cd07841 6 KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKS--NINLVFEF 83 (298)
T ss_pred eeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCC--EEEEEEcc
Confidence 67999999999999986 6889999998544321 11223456788999999999999999999998866 78999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+ +|+|.+++.... ..+++..+.+++.|+++||+|||+. +++||||||+||+++.++.++|+|||+++...
T Consensus 84 ~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~ 153 (298)
T cd07841 84 M-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFG 153 (298)
T ss_pred c-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeecc
Confidence 9 889999996443 3689999999999999999999999 99999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.3e-22 Score=192.66 Aligned_cols=144 Identities=24% Similarity=0.321 Sum_probs=120.5
Q ss_pred chhCcCCCeeEEEEEeCC----CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||.||+|+..+ ...+|+|++.... .....+.+.+|+.+++.++||||+++++++...+. ..++|+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~-~~~lv~ 76 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT---DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEG-SPLVVL 76 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccC---CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCC-CcEEEE
Confidence 468999999999998642 3568999873221 12334678899999999999999999998864432 578999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
||+++|+|.+++.... ..+++..+..++.++++||+|||+. +++||||||+|||+++++.+||+|||+++.+
T Consensus 77 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~ 148 (262)
T cd05058 77 PYMKHGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDI 148 (262)
T ss_pred ecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccc
Confidence 9999999999996433 2468888999999999999999998 9999999999999999999999999999754
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.7e-22 Score=193.50 Aligned_cols=142 Identities=18% Similarity=0.152 Sum_probs=124.2
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|... ++..+++|.+.... ....+.+.+|++++..++|||++++++++...+ ..++|+||+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~--~~~~v~e~~ 84 (282)
T cd06643 11 GELGDGAFGKVYKAQNKETGVLAAAKVIDTKS----EEELEDYMVEIDILASCDHPNIVKLLDAFYYEN--NLWILIEFC 84 (282)
T ss_pred hhcccCCCeEEEEEEECCCCeEEEEEEeCCCC----HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCC--EEEEEEEec
Confidence 67999999999999987 46778888874322 223457889999999999999999999998876 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
++|+|.+++... ..+++|..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||+++..
T Consensus 85 ~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~ 153 (282)
T cd06643 85 AGGAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKN 153 (282)
T ss_pred CCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccc
Confidence 999999988632 34689999999999999999999998 9999999999999999999999999998754
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.2e-22 Score=195.93 Aligned_cols=144 Identities=24% Similarity=0.290 Sum_probs=122.2
Q ss_pred chhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEE
Q 009965 364 NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
+.||+|+||.||+|+.. +...+++|.+.... .....+++.+|+.+++.++||||+++++.|...+ ..++
T Consensus 6 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~l 80 (290)
T cd05045 6 KTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA---SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDG--PLLL 80 (290)
T ss_pred ccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC---CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC--CcEE
Confidence 68999999999999863 22468887764322 1223457899999999999999999999998776 7899
Q ss_pred EEecCCCCChhhhhccC----------------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCC
Q 009965 438 VFDYASNGTLYEHLHYG----------------------ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSA 495 (521)
Q Consensus 438 v~ey~~~gsL~~~l~~~----------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~N 495 (521)
++||+++|+|.+++... ....++|.++..++.|++.||+|||+. +++||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhhhe
Confidence 99999999999997531 123588999999999999999999998 99999999999
Q ss_pred eeecCCCCeeeCCCchhhhc
Q 009965 496 VYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 496 iLld~~~~~kl~DfGla~~~ 515 (521)
||+++++.+||+|||+++.+
T Consensus 158 ill~~~~~~kl~dfg~~~~~ 177 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDV 177 (290)
T ss_pred EEEcCCCcEEeccccccccc
Confidence 99999999999999999764
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=4e-22 Score=207.79 Aligned_cols=136 Identities=13% Similarity=0.104 Sum_probs=119.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
..||+|+||.||+++.. .++.||||... ...+.+|++++++++|+|||++++++.... ..++||||+
T Consensus 175 ~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~----------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~--~~~lv~e~~ 242 (461)
T PHA03211 175 RALTPGSEGCVFESSHPDYPQRVVVKAGW----------YASSVHEARLLRRLSHPAVLALLDVRVVGG--LTCLVLPKY 242 (461)
T ss_pred EEEccCCCeEEEEEEECCCCCEEEEeccc----------ccCHHHHHHHHHHCCCCCCCcEEEEEEECC--EEEEEEEcc
Confidence 68999999999999987 57889998531 123578999999999999999999998776 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
. |+|.+++.... ..++|.++..|+.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 243 ~-~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~ 311 (461)
T PHA03211 243 R-SDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFAR 311 (461)
T ss_pred C-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceecc
Confidence 5 69999886432 3699999999999999999999998 99999999999999999999999999998654
|
|
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.5e-22 Score=197.19 Aligned_cols=146 Identities=23% Similarity=0.255 Sum_probs=123.8
Q ss_pred hchhCcCCCeeEEEEEeC--------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCC
Q 009965 363 SNIIGSSPDSLVYKGTMK--------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPF 433 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~--------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 433 (521)
.+.||+|+||.||+++.. ++..||+|.+.... .....+++.+|+.++..+ +||||+++++++....
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~-- 94 (304)
T cd05101 20 GKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG-- 94 (304)
T ss_pred cceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc---chHHHHHHHHHHHHHHhhccCCCchheeEEEecCC--
Confidence 378999999999999752 23468888874221 123346789999999999 8999999999998776
Q ss_pred ceEEEEecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeec
Q 009965 434 TRMLVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT 499 (521)
Q Consensus 434 ~~~lv~ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld 499 (521)
..++||||+++|+|.+++.... ...++|.++..++.|+++||+|||+. +++||||||+||+++
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nili~ 171 (304)
T cd05101 95 PLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNVLVT 171 (304)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceEEEc
Confidence 7899999999999999997431 23578999999999999999999998 999999999999999
Q ss_pred CCCCeeeCCCchhhhcc
Q 009965 500 EDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 500 ~~~~~kl~DfGla~~~~ 516 (521)
+++.+||+|||+++.+.
T Consensus 172 ~~~~~kl~D~g~~~~~~ 188 (304)
T cd05101 172 ENNVMKIADFGLARDVN 188 (304)
T ss_pred CCCcEEECCCccceecc
Confidence 99999999999998654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.5e-22 Score=194.97 Aligned_cols=144 Identities=22% Similarity=0.321 Sum_probs=123.3
Q ss_pred chhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEE
Q 009965 364 NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
+.||+|+||.||+|+.. ++..+++|.+... .....+.+.+|+.++++++||||+++++++.... ..++
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~l 84 (291)
T cd05094 11 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP----TLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD--PLIM 84 (291)
T ss_pred eeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc----cHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCC--ceEE
Confidence 78999999999999753 3456888876322 1233467899999999999999999999998776 7899
Q ss_pred EEecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCC
Q 009965 438 VFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503 (521)
Q Consensus 438 v~ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~ 503 (521)
||||+++|+|.+++.... ...++|..+.+++.+++.||+|||+. +|+||||||+||++++++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCc
Confidence 999999999999996422 13489999999999999999999999 9999999999999999999
Q ss_pred eeeCCCchhhhcc
Q 009965 504 PKVSPLCLSFLLV 516 (521)
Q Consensus 504 ~kl~DfGla~~~~ 516 (521)
++|+|||+++...
T Consensus 162 ~~l~dfg~a~~~~ 174 (291)
T cd05094 162 VKIGDFGMSRDVY 174 (291)
T ss_pred EEECCCCcccccC
Confidence 9999999997543
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.9e-22 Score=192.20 Aligned_cols=142 Identities=24% Similarity=0.386 Sum_probs=120.5
Q ss_pred chhCcCCCeeEEEEEeCC-CC--EEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMKG-GP--EIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~-~~--~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
++||+|+||.||+|+..+ +. .+++|.+... ......+.+.+|++++.++ +||||+++++++...+ ..++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~--~~~lv~ 75 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY---ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG--YLYLAI 75 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEcccc---CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCC--CceEEE
Confidence 468999999999999864 44 4577766321 1223345788999999999 8999999999998876 789999
Q ss_pred ecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCee
Q 009965 440 DYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPK 505 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~k 505 (521)
||+++|+|.++++... ...+++.++..++.|++.||+|||+. +++||||||+||++++++.+|
T Consensus 76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~k 152 (270)
T cd05047 76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAK 152 (270)
T ss_pred EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEE
Confidence 9999999999986422 12478999999999999999999998 999999999999999999999
Q ss_pred eCCCchhh
Q 009965 506 VSPLCLSF 513 (521)
Q Consensus 506 l~DfGla~ 513 (521)
|+|||+++
T Consensus 153 l~dfgl~~ 160 (270)
T cd05047 153 IADFGLSR 160 (270)
T ss_pred ECCCCCcc
Confidence 99999985
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=9e-22 Score=193.07 Aligned_cols=143 Identities=22% Similarity=0.308 Sum_probs=123.1
Q ss_pred chhCcCCCeeEEEEEeC-CCC----EEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGP----EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~----~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||+|..+ +|. .+|+|...... ......++.+|+.++++++||||++++++|.. . ..++|
T Consensus 13 ~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~--~~~~v 86 (279)
T cd05057 13 KVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET---SPKANKEILDEAYVMASVDHPHVVRLLGICLS-S--QVQLI 86 (279)
T ss_pred ceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-C--ceEEE
Confidence 78999999999999875 333 57888764321 12345678999999999999999999999987 3 68999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+||+++|+|.++++... ..+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 87 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~ 160 (279)
T cd05057 87 TQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLD 160 (279)
T ss_pred EecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCccccccc
Confidence 99999999999997543 3489999999999999999999998 99999999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.1e-22 Score=192.02 Aligned_cols=148 Identities=18% Similarity=0.210 Sum_probs=125.6
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccc-cchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH-WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~-~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|... ++..|++|.+...... ......+.+.+|+.++++++||||+++++++........++++||
T Consensus 8 ~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~ 87 (266)
T cd06651 8 KLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEY 87 (266)
T ss_pred ceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEeC
Confidence 78999999999999886 6889999987543221 122234568899999999999999999999876433367899999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+++++|.+++.... .+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 88 ~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~ 157 (266)
T cd06651 88 MPGGSVKDQLKAYG--ALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 157 (266)
T ss_pred CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCccccc
Confidence 99999999996433 488999999999999999999998 99999999999999999999999999987653
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.9e-22 Score=196.21 Aligned_cols=145 Identities=21% Similarity=0.288 Sum_probs=123.2
Q ss_pred chhCcCCCeeEEEEEeC-----------------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeE
Q 009965 364 NIIGSSPDSLVYKGTMK-----------------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGY 426 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-----------------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~ 426 (521)
+.||+|+||.||++... ++..+|+|.+.... .....++|.+|+.++.+++|+||++++++
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~~~~ 87 (296)
T cd05095 11 EKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA---NKNARNDFLKEIKIMSRLKDPNIIRLLAV 87 (296)
T ss_pred eeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCcceEEEE
Confidence 78999999999998643 23468888874321 22345679999999999999999999999
Q ss_pred EecCCCCceEEEEecCCCCChhhhhccCC---------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCee
Q 009965 427 CRESSPFTRMLVFDYASNGTLYEHLHYGE---------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVY 497 (521)
Q Consensus 427 ~~~~~~~~~~lv~ey~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiL 497 (521)
+...+ ..++||||+++|+|.+++.... ...+++.++.+++.|++.||+|||+. +++||||||+||+
T Consensus 88 ~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~Nil 162 (296)
T cd05095 88 CITSD--PLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRNCL 162 (296)
T ss_pred EecCC--ccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChheEE
Confidence 98877 7899999999999999986432 12478899999999999999999998 9999999999999
Q ss_pred ecCCCCeeeCCCchhhhcc
Q 009965 498 LTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 498 ld~~~~~kl~DfGla~~~~ 516 (521)
+++++.++|+|||+++.+.
T Consensus 163 i~~~~~~~l~dfg~~~~~~ 181 (296)
T cd05095 163 VGKNYTIKIADFGMSRNLY 181 (296)
T ss_pred EcCCCCEEeccCccccccc
Confidence 9999999999999998653
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.7e-22 Score=194.03 Aligned_cols=147 Identities=19% Similarity=0.248 Sum_probs=125.7
Q ss_pred hchhCcCCCeeEEEEEeCC-----CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEE
Q 009965 363 SNIIGSSPDSLVYKGTMKG-----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~~-----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
.++||+|+||.||+|...+ +..|++|++... ......+.+.+|+.++.+++||||+++++++...+ ...++
T Consensus 11 ~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~-~~~~~ 86 (280)
T cd05043 11 SDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH---ASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDG-EPPFV 86 (280)
T ss_pred eeeecccCCceEEEEEEecCCCCceeEEEEEEccCC---CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC-CCCEE
Confidence 3789999999999999865 678888887422 22334567899999999999999999999987643 26899
Q ss_pred EEecCCCCChhhhhccCCC------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCch
Q 009965 438 VFDYASNGTLYEHLHYGER------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCL 511 (521)
Q Consensus 438 v~ey~~~gsL~~~l~~~~~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGl 511 (521)
++||+++|+|.+++..... ..+++.++..++.+++.||+|||+. +++||||||+||++++++.+||+|||+
T Consensus 87 ~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d~g~ 163 (280)
T cd05043 87 LYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITDNAL 163 (280)
T ss_pred EEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECCCCC
Confidence 9999999999999864321 4589999999999999999999998 999999999999999999999999999
Q ss_pred hhhcc
Q 009965 512 SFLLV 516 (521)
Q Consensus 512 a~~~~ 516 (521)
++.+.
T Consensus 164 ~~~~~ 168 (280)
T cd05043 164 SRDLF 168 (280)
T ss_pred ccccc
Confidence 98653
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.3e-22 Score=193.78 Aligned_cols=145 Identities=19% Similarity=0.321 Sum_probs=124.3
Q ss_pred chhCcCCCeeEEEEEeCC------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEE
Q 009965 364 NIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
+.||+|+||.||+|...+ +..||+|.+.... .......+.+|+.++..++||||+++++++.... ..++
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~---~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~~ 86 (277)
T cd05032 12 RELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA---SMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ--PTLV 86 (277)
T ss_pred eEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc---CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC--CcEE
Confidence 789999999999998753 3679999874321 2233457899999999999999999999998876 7899
Q ss_pred EEecCCCCChhhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCC
Q 009965 438 VFDYASNGTLYEHLHYGE--------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPL 509 (521)
Q Consensus 438 v~ey~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~Df 509 (521)
||||+++|+|.+++.... ...++|..+..++.|++.||.|||+. +++||||||+||++++++.+||+||
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl~df 163 (277)
T cd05032 87 VMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKIGDF 163 (277)
T ss_pred EEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEECCc
Confidence 999999999999986322 22478999999999999999999998 9999999999999999999999999
Q ss_pred chhhhcc
Q 009965 510 CLSFLLV 516 (521)
Q Consensus 510 Gla~~~~ 516 (521)
|+++.+.
T Consensus 164 g~~~~~~ 170 (277)
T cd05032 164 GMTRDIY 170 (277)
T ss_pred ccchhhc
Confidence 9987653
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.9e-22 Score=194.83 Aligned_cols=144 Identities=19% Similarity=0.213 Sum_probs=124.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||+|+.. ++..||+|.+...... ....+.+.+|+.++..++||||+++++++.+++ ..++|+||+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e~~ 81 (285)
T cd07861 6 EKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEE--EGVPSTAIREISLLKELQHPNIVCLQDVLMQES--RLYLIFEFL 81 (285)
T ss_pred eEecccCceEEEEEEECCCCcEEEEEEecccccc--CCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCC--eEEEEEecC
Confidence 67999999999999986 6889999988543211 223356889999999999999999999998776 789999999
Q ss_pred CCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 443 SNGTLYEHLHYGE-RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
+ |+|.+++.... ...+++..+..++.|+++||+|||+. +++||||||+||++++++.+||+|||+++..
T Consensus 82 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 151 (285)
T cd07861 82 S-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAF 151 (285)
T ss_pred C-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeec
Confidence 7 68998886433 24689999999999999999999998 9999999999999999999999999998754
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.9e-22 Score=190.35 Aligned_cols=145 Identities=13% Similarity=0.187 Sum_probs=127.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||++... ++..+|+|.+..... ....+.+.+|+.++++++|+||+++.+.+.+.+ ..++||||+
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 80 (255)
T cd08219 6 RVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS---SSAVEDSRKEAVLLAKMKHPNIVAFKESFEADG--HLYIVMEYC 80 (255)
T ss_pred EEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc---hHHHHHHHHHHHHHHhCCCCCcceEEEEEEECC--EEEEEEeeC
Confidence 78999999999999886 688999998753321 123457889999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.......+++.....++.+++.||.|||+. +|+|+||||+||++++++.++++|||+++.+.
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~ 151 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLT 151 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeec
Confidence 999999998754455689999999999999999999998 99999999999999999999999999987654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.6e-22 Score=197.45 Aligned_cols=146 Identities=25% Similarity=0.285 Sum_probs=124.0
Q ss_pred hchhCcCCCeeEEEEEeCC--------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCC
Q 009965 363 SNIIGSSPDSLVYKGTMKG--------GPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPF 433 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~~--------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 433 (521)
.+.||+|+||.||+++..+ ...+|+|.+.... ......++.+|+.++.++ +||||++++++|...+
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~-- 97 (307)
T cd05098 23 GKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA---TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG-- 97 (307)
T ss_pred eeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC---ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC--
Confidence 3789999999999997632 3469999874321 122345688899999999 8999999999998877
Q ss_pred ceEEEEecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeec
Q 009965 434 TRMLVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT 499 (521)
Q Consensus 434 ~~~lv~ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld 499 (521)
..++||||+++|+|.+++.... ...++|.++.+++.|++.||+|||+. +++||||||+||+++
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill~ 174 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVT 174 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheEEc
Confidence 7899999999999999997432 13589999999999999999999998 999999999999999
Q ss_pred CCCCeeeCCCchhhhcc
Q 009965 500 EDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 500 ~~~~~kl~DfGla~~~~ 516 (521)
+++.+||+|||+++.+.
T Consensus 175 ~~~~~kL~dfg~a~~~~ 191 (307)
T cd05098 175 EDNVMKIADFGLARDIH 191 (307)
T ss_pred CCCcEEECCCccccccc
Confidence 99999999999987653
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.5e-22 Score=194.53 Aligned_cols=145 Identities=19% Similarity=0.249 Sum_probs=125.6
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
..||+|++|.||+|+.+ +++.||+|++..... .....+.+.+|+.++.+++|||++++++++.... ..++||||+
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~~v~e~~ 82 (286)
T cd07847 7 SKIGEGSYGVVFKCRNRETGQIVAIKKFVESED--DPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKR--KLHLVFEYC 82 (286)
T ss_pred eeecccCCeEEEEEEECCCCcEEEEEEEeeccc--CccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCC--EEEEEEecc
Confidence 67999999999999987 688999998854321 1123456889999999999999999999998876 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
+++.|..++... ..++|.++..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.+..
T Consensus 83 ~~~~l~~~~~~~--~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 152 (286)
T cd07847 83 DHTVLNELEKNP--RGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTG 152 (286)
T ss_pred CccHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCC
Confidence 998888877533 2489999999999999999999998 999999999999999999999999999987643
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.9e-22 Score=190.84 Aligned_cols=146 Identities=28% Similarity=0.443 Sum_probs=127.9
Q ss_pred chhCcCCCeeEEEEEeCC----CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||.||+|...+ +..+++|.+...... ...+.+.+|++.+..++|+|++++++++.... ..++||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv~ 75 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASE---EERKDFLKEARVMKKLGHPNVVRLLGVCTEEE--PLYLVL 75 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccch---hHHHHHHHHHHHHhhcCCCChheeeeeecCCC--ceEEEE
Confidence 469999999999999864 788999988543222 13567899999999999999999999998866 789999
Q ss_pred ecCCCCChhhhhccCC-------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchh
Q 009965 440 DYASNGTLYEHLHYGE-------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla 512 (521)
||+++|+|.+++.... ...+++.++.+++.++++||+|||+. +++||||||+||++++++.+||+|||.+
T Consensus 76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~ 152 (262)
T cd00192 76 EYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLS 152 (262)
T ss_pred EeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEcccccc
Confidence 9999999999997541 35689999999999999999999998 9999999999999999999999999999
Q ss_pred hhccc
Q 009965 513 FLLVS 517 (521)
Q Consensus 513 ~~~~~ 517 (521)
+.+..
T Consensus 153 ~~~~~ 157 (262)
T cd00192 153 RDVYD 157 (262)
T ss_pred ccccc
Confidence 87654
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.8e-22 Score=196.40 Aligned_cols=144 Identities=22% Similarity=0.344 Sum_probs=121.7
Q ss_pred hchhCcCCCeeEEEEEeCC-CC--EEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEE
Q 009965 363 SNIIGSSPDSLVYKGTMKG-GP--EIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~~-~~--~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv 438 (521)
.++||+|+||.||+|+..+ +. .+++|.+... ......+.|.+|+.++.++ +||||+++++++...+ ..++|
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~--~~~lv 81 (297)
T cd05089 7 EDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEF---ASENDHRDFAGELEVLCKLGHHPNIINLLGACENRG--YLYIA 81 (297)
T ss_pred eeeecCCCcceEEEEEecCCCCcceeEEEEcccc---CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCC--cceEE
Confidence 3789999999999998863 33 4677776321 1123346789999999999 7999999999998776 78999
Q ss_pred EecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCe
Q 009965 439 FDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSP 504 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~ 504 (521)
+||+++|+|.++++... ...+++..+..|+.|++.||+|||+. +++||||||+|||+++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCeE
Confidence 99999999999996432 13488999999999999999999998 99999999999999999999
Q ss_pred eeCCCchhhh
Q 009965 505 KVSPLCLSFL 514 (521)
Q Consensus 505 kl~DfGla~~ 514 (521)
||+|||+++.
T Consensus 159 kl~dfg~~~~ 168 (297)
T cd05089 159 KIADFGLSRG 168 (297)
T ss_pred EECCcCCCcc
Confidence 9999999864
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.8e-22 Score=193.36 Aligned_cols=145 Identities=21% Similarity=0.292 Sum_probs=122.8
Q ss_pred chhCcCCCeeEEEEEeCC------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEE
Q 009965 364 NIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
+.||+|++|.||+|.+.+ +..||+|.+... ........|.+|+.++++++|+||+++++++.+.. ..++
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~---~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~l 86 (277)
T cd05036 12 RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPES---CSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERL--PRFI 86 (277)
T ss_pred eECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCC---CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--CcEE
Confidence 789999999999998854 456888876322 12233457999999999999999999999998776 6799
Q ss_pred EEecCCCCChhhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCC---CeeeCCC
Q 009965 438 VFDYASNGTLYEHLHYGE-----RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF---SPKVSPL 509 (521)
Q Consensus 438 v~ey~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~---~~kl~Df 509 (521)
||||+++|+|.++++... ...++|.++.+++.||+.||+|||+. +++||||||+||++++++ .+||+||
T Consensus 87 v~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl~df 163 (277)
T cd05036 87 LLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKIADF 163 (277)
T ss_pred EEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEeccC
Confidence 999999999999986432 13589999999999999999999998 999999999999998754 5999999
Q ss_pred chhhhcc
Q 009965 510 CLSFLLV 516 (521)
Q Consensus 510 Gla~~~~ 516 (521)
|+++.+.
T Consensus 164 g~~~~~~ 170 (277)
T cd05036 164 GMARDIY 170 (277)
T ss_pred ccccccC
Confidence 9998653
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.8e-22 Score=191.87 Aligned_cols=148 Identities=20% Similarity=0.241 Sum_probs=128.6
Q ss_pred hchhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEec
Q 009965 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
.+.||+|+||.||+|... +++.+|+|.+..... ......+.+.+|++++++++|+|++++++++...+ ..++||||
T Consensus 7 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~--~~~lv~e~ 83 (267)
T cd08224 7 EKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEM-MDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENN--ELNIVLEL 83 (267)
T ss_pred eeeeccCCceEEEEEEEcCCCCEEEEEEeecccc-cchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCC--eEEEEEec
Confidence 378999999999999997 789999998754321 12233567899999999999999999999998876 78999999
Q ss_pred CCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 442 ASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+++|+|.+++.. .....+++.++..++.++++||+|||+. +++||||||+||++++++.++|+|||+++.+.
T Consensus 84 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~ 157 (267)
T cd08224 84 ADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred CCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeecc
Confidence 999999999863 2234589999999999999999999998 99999999999999999999999999987654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.3e-22 Score=190.00 Aligned_cols=144 Identities=24% Similarity=0.336 Sum_probs=126.8
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
++||+|+||.||++...+++.||+|.+..... ......|.+|+.++++++||||+++++++.+.. ..++||||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~v~e~~~ 75 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLP---PDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQ--PIYIVMELVP 75 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCC---HHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCC--CeEEEEEcCC
Confidence 36899999999999987789999998744322 134567999999999999999999999998877 7899999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+++|.+++.... ..+++..+..++.+++.|++|||+. +++||||||+||++++++.+||+|||+++...
T Consensus 76 ~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~ 144 (251)
T cd05041 76 GGSLLTFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEE 144 (251)
T ss_pred CCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeecccccccc
Confidence 999999996433 3589999999999999999999999 99999999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=7e-22 Score=193.71 Aligned_cols=145 Identities=20% Similarity=0.123 Sum_probs=125.8
Q ss_pred hCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCCC
Q 009965 366 IGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASN 444 (521)
Q Consensus 366 ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~~ 444 (521)
||+|+||+||++... +|+.+|+|.+..+... .....+.+.+|++++..++||||+++.+++...+ ..++||||+++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~e~~~~ 77 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLK-KRKGEQMALNEKKILEKVSSRFIVSLAYAFETKD--DLCLVMTLMNG 77 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhh-hhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCC--eEEEEEecCCC
Confidence 689999999999876 6889999988543211 1223456788999999999999999999998776 78999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 445 GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 445 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|.+++.......+++.++..++.|++.||.|||+. +++||||+|+||++++++.+||+|||+++.+.
T Consensus 78 ~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~ 146 (277)
T cd05577 78 GDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELK 146 (277)
T ss_pred CcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhc
Confidence 9999999755545689999999999999999999998 99999999999999999999999999988654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.3e-22 Score=191.34 Aligned_cols=140 Identities=25% Similarity=0.369 Sum_probs=122.8
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||++.. +++.+|+|.+... ...+.+.+|+.++.+++|||++++++++... ..++||||++
T Consensus 12 ~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~------~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~---~~~~v~e~~~ 81 (254)
T cd05083 12 EIIGEGEFGAVLQGEY-TGQKVAVKNIKCD------VTAQAFLEETAVMTKLHHKNLVRLLGVILHN---GLYIVMELMS 81 (254)
T ss_pred eeeccCCCCceEeccc-CCCceEEEeecCc------chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC---CcEEEEECCC
Confidence 7899999999999975 5677999987432 1235789999999999999999999998764 4689999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+|+|.+++.......+++.++.+++.|+++|++|||+. +++||||||+||+++.++.+||+|||+++...
T Consensus 82 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~ 151 (254)
T cd05083 82 KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGS 151 (254)
T ss_pred CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceecc
Confidence 99999999755555689999999999999999999998 99999999999999999999999999987643
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.4e-22 Score=195.08 Aligned_cols=144 Identities=27% Similarity=0.361 Sum_probs=124.2
Q ss_pred chhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEE
Q 009965 364 NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
..||+|+||.||+++.. ++..+|+|.+.... .....++|.+|+.++++++||||+++++++.... ..++
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~--~~~l 85 (288)
T cd05050 11 RDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA---SADMQADFQREAALMAEFDHPNIVKLLGVCAVGK--PMCL 85 (288)
T ss_pred ccccccccccEEEEEEcccCCCCcceeEEEEecCCCc---CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC--ccEE
Confidence 78999999999999864 45789999874321 2234567999999999999999999999998776 7899
Q ss_pred EEecCCCCChhhhhccCC--------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCee
Q 009965 438 VFDYASNGTLYEHLHYGE--------------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVY 497 (521)
Q Consensus 438 v~ey~~~gsL~~~l~~~~--------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiL 497 (521)
|+||+++|+|.+++.... ...+++.+++.++.|++.||+|||+. +++||||||+||+
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~nil 162 (288)
T cd05050 86 LFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATRNCL 162 (288)
T ss_pred EEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHhheE
Confidence 999999999999996321 13478999999999999999999998 9999999999999
Q ss_pred ecCCCCeeeCCCchhhhc
Q 009965 498 LTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 498 ld~~~~~kl~DfGla~~~ 515 (521)
+++++.++|+|||+++.+
T Consensus 163 ~~~~~~~~l~dfg~~~~~ 180 (288)
T cd05050 163 VGENMVVKIADFGLSRNI 180 (288)
T ss_pred ecCCCceEECccccceec
Confidence 999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.6e-22 Score=195.91 Aligned_cols=142 Identities=21% Similarity=0.256 Sum_probs=123.2
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. ++..||+|.+...... .....+.+|+.++++++||||+++++++...+ ..++||||+
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~--~~~lv~e~~ 86 (301)
T cd07873 12 DKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE---GAPCTAIREVSLLKDLKHANIVTLHDIIHTEK--SLTLVFEYL 86 (301)
T ss_pred eEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc---CchhHHHHHHHHHHhcCCCCcceEEEEEecCC--eEEEEEecc
Confidence 67999999999999886 6789999988543221 22345788999999999999999999998776 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
+ ++|.+++... ...+++.....++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 87 ~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 154 (301)
T cd07873 87 D-KDLKQYLDDC-GNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAK 154 (301)
T ss_pred c-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhcc
Confidence 7 5999988643 23588999999999999999999998 9999999999999999999999999998764
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.7e-22 Score=192.89 Aligned_cols=142 Identities=18% Similarity=0.139 Sum_probs=125.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||++... ++..+|+|.+.... ....+.|.+|++++++++||||+++++++.... ..++||||+
T Consensus 11 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 84 (280)
T cd06611 11 GELGDGAFGKVYKAQHKETGLFAAAKIIQIES----EEELEDFMVEIDILSECKHPNIVGLYEAYFYEN--KLWILIEFC 84 (280)
T ss_pred HHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC----HHHHHHHHHHHHHHHhCCCCceeEEEEEEecCC--eEEEEeecc
Confidence 67999999999999986 67899999875432 223457899999999999999999999998776 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
++|+|.+++... ...+++..+..++.|++.||.|||+. +|+|+||||+||+++.++.++|+|||++...
T Consensus 85 ~~~~L~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~ 153 (280)
T cd06611 85 DGGALDSIMLEL-ERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKN 153 (280)
T ss_pred CCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhh
Confidence 999999998643 23589999999999999999999999 9999999999999999999999999988654
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.87 E-value=9e-22 Score=190.30 Aligned_cols=146 Identities=19% Similarity=0.249 Sum_probs=127.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeecc-ccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEE-HWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~-~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|++|.||+|... ++..|++|.+..... .......+.+.+|+.++++++|+||+++++++.+.. ..++++||
T Consensus 6 ~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~lv~e~ 83 (258)
T cd06632 6 ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREED--NLYIFLEL 83 (258)
T ss_pred ceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCC--eEEEEEEe
Confidence 67999999999999987 788999999865432 122334567899999999999999999999998776 78999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+++++|.+++.... .+++..+..++.++++||+|||+. +++|+||+|+||++++++.+||+|||+++...
T Consensus 84 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~ 153 (258)
T cd06632 84 VPGGSLAKLLKKYG--SFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVV 153 (258)
T ss_pred cCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceecc
Confidence 99999999996433 489999999999999999999998 99999999999999999999999999987654
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.6e-22 Score=192.68 Aligned_cols=144 Identities=24% Similarity=0.369 Sum_probs=123.3
Q ss_pred chhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEE
Q 009965 364 NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
..||+|+||.||+|+.+ +...+++|.+.... .....+++.+|++++++++||||+++++++.+.+ ..++
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~l 85 (275)
T cd05046 11 TTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK---DENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE--PHYM 85 (275)
T ss_pred eeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc---chHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC--cceE
Confidence 67999999999999874 23568888764321 1223567999999999999999999999998766 7899
Q ss_pred EEecCCCCChhhhhccCCC-------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCc
Q 009965 438 VFDYASNGTLYEHLHYGER-------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLC 510 (521)
Q Consensus 438 v~ey~~~gsL~~~l~~~~~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfG 510 (521)
||||+++|+|.+++..... ..++|..+..++.|++.||+|||+. +|+||||||+||++++++.++++|||
T Consensus 86 v~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~~~ 162 (275)
T cd05046 86 ILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSLLS 162 (275)
T ss_pred EEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEcccc
Confidence 9999999999999974331 2589999999999999999999998 99999999999999999999999999
Q ss_pred hhhhc
Q 009965 511 LSFLL 515 (521)
Q Consensus 511 la~~~ 515 (521)
+++..
T Consensus 163 ~~~~~ 167 (275)
T cd05046 163 LSKDV 167 (275)
T ss_pred ccccc
Confidence 98753
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.2e-22 Score=194.97 Aligned_cols=145 Identities=19% Similarity=0.173 Sum_probs=126.9
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||++... +++.+|+|.+.... .......+.+.+|++++++++||||+++++++.+.. ..++||||+
T Consensus 7 ~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e~~ 83 (290)
T cd05580 7 KTLGTGSFGRVMLVRHKGSGKYYALKILSKAK-IVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDS--NLYLVMEYV 83 (290)
T ss_pred EEeecCCCeEEEEEEEcCCCCEEEEEEEEHHH-hhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCC--eEEEEEecC
Confidence 78999999999999986 68899999874322 112233467889999999999999999999998876 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++... ..+++..+..++.|+++||+|||+. +++||||+|+||++++++.+||+|||+++.+.
T Consensus 84 ~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~ 152 (290)
T cd05580 84 PGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVK 152 (290)
T ss_pred CCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccC
Confidence 999999999644 3589999999999999999999998 99999999999999999999999999998754
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=1e-21 Score=192.92 Aligned_cols=146 Identities=23% Similarity=0.330 Sum_probs=126.8
Q ss_pred chhCcCCCeeEEEEEeC-----CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||++++. ++..+|||.+...... ...+.|.+|+++++.++||||+++++++........++|
T Consensus 10 ~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~---~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 86 (284)
T cd05038 10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE---QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLI 86 (284)
T ss_pred eeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch---HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEE
Confidence 68999999999999864 3678999988543221 345679999999999999999999999977444478999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|||+++|+|.+++.... ..++|.++..++.|++.||+|||+. +++||||||+||+++.++.++|+|||+++.+.
T Consensus 87 ~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 87 MEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLAKVLP 160 (284)
T ss_pred EecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence 99999999999997443 2589999999999999999999998 99999999999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.7e-22 Score=208.98 Aligned_cols=148 Identities=17% Similarity=0.164 Sum_probs=125.3
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC------CceE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP------FTRM 436 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~------~~~~ 436 (521)
+.||+|+||+||+|+.. +++.||||.+..... .......+.+|+.++..++|+|++++...+..... ...+
T Consensus 38 ~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~--~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~ 115 (496)
T PTZ00283 38 RVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM--SEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIA 115 (496)
T ss_pred EEEecCCCEEEEEEEEcCCCCEEEEEEEecccC--CHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEE
Confidence 78999999999999875 789999999854322 23345678899999999999999999887653321 1367
Q ss_pred EEEecCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 437 LVFDYASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
+||||+++|+|.++++.. ....+++..+..|+.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 116 lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~DFGls~~ 192 (496)
T PTZ00283 116 LVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLGDFGFSKM 192 (496)
T ss_pred EEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEEecccCee
Confidence 999999999999999643 234689999999999999999999998 999999999999999999999999999986
Q ss_pred cc
Q 009965 515 LV 516 (521)
Q Consensus 515 ~~ 516 (521)
+.
T Consensus 193 ~~ 194 (496)
T PTZ00283 193 YA 194 (496)
T ss_pred cc
Confidence 54
|
|
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-21 Score=190.66 Aligned_cols=149 Identities=15% Similarity=0.198 Sum_probs=126.6
Q ss_pred hchhCcCCCeeEEEEEeC-CCCEEEEEEeeeecc-ccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEe
Q 009965 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEE-HWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~-~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
.+.||+|+||.||+|... ++..+|+|.+..... .......+.+.+|++++++++||||+++++++.+......++++|
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e 86 (264)
T cd06653 7 GKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVE 86 (264)
T ss_pred eeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEE
Confidence 378999999999999886 688999998743221 112234467899999999999999999999987654336789999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|+++++|.+++.... .+++....+++.+++.||.|||+. +++|+||||+||++++++.++|+|||+++.+.
T Consensus 87 ~~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 157 (264)
T cd06653 87 YMPGGSIKDQLKAYG--ALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRIQ 157 (264)
T ss_pred eCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECccccccccc
Confidence 999999999986433 488999999999999999999998 99999999999999999999999999998653
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.9e-22 Score=188.36 Aligned_cols=150 Identities=20% Similarity=0.263 Sum_probs=130.7
Q ss_pred CHHHHHHHHhhhhchhCcCCCeeEEEEEe-CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEe
Q 009965 351 SRQELEVACEDFSNIIGSSPDSLVYKGTM-KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCR 428 (521)
Q Consensus 351 ~~~~l~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~ 428 (521)
+++|+-+.| ++++|+|+|+.|-.++. .+|.++|||++.+. .+..+.+..+|++++... .|+||++|+.|++
T Consensus 74 ~F~d~YkLt---~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq----~gHsR~RvfREVe~f~~Cqgh~nilqLiefFE 146 (463)
T KOG0607|consen 74 KFEDMYKLT---SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ----PGHSRSRVFREVETFYQCQGHKNILQLIEFFE 146 (463)
T ss_pred hHHHHHHhH---HHHhcCccceeeeeeeeeccchhhhhhhhhcC----CchHHHHHHHHHHHHHHhcCCccHHHHHHHhc
Confidence 356777777 48999999999999875 58999999998432 456778899999999999 6999999999999
Q ss_pred cCCCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCC---Cee
Q 009965 429 ESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF---SPK 505 (521)
Q Consensus 429 ~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~---~~k 505 (521)
++. ..|||||-|.+|+|.++++++. .+++.+..++..+||.||.|||.. +|.||||||+|||..+.. -+|
T Consensus 147 dd~--~FYLVfEKm~GGplLshI~~~~--~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvK 219 (463)
T KOG0607|consen 147 DDT--RFYLVFEKMRGGPLLSHIQKRK--HFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVK 219 (463)
T ss_pred ccc--eEEEEEecccCchHHHHHHHhh--hccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCcee
Confidence 988 7899999999999999997544 489999999999999999999999 999999999999996543 479
Q ss_pred eCCCchhhh
Q 009965 506 VSPLCLSFL 514 (521)
Q Consensus 506 l~DfGla~~ 514 (521)
|+||.|+.-
T Consensus 220 iCDfDLgSg 228 (463)
T KOG0607|consen 220 ICDFDLGSG 228 (463)
T ss_pred eeccccccc
Confidence 999988754
|
|
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.7e-22 Score=196.73 Aligned_cols=146 Identities=23% Similarity=0.273 Sum_probs=123.6
Q ss_pred hchhCcCCCeeEEEEEeC--------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCC
Q 009965 363 SNIIGSSPDSLVYKGTMK--------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPF 433 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~--------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 433 (521)
.+.||+|+||.||+++.. +...+|+|.+.... ......++.+|+.++.++ +||||++++++|....
T Consensus 17 ~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-- 91 (314)
T cd05099 17 GKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA---TDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG-- 91 (314)
T ss_pred eeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC---ChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC--
Confidence 378999999999999752 24568888874321 123345688999999999 6999999999998766
Q ss_pred ceEEEEecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeec
Q 009965 434 TRMLVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT 499 (521)
Q Consensus 434 ~~~lv~ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld 499 (521)
..++|+||+++|+|.+++.... ...++|.++.+++.|++.||+|||+. +++||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill~ 168 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVLVT 168 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeEEEc
Confidence 7899999999999999996421 23589999999999999999999998 999999999999999
Q ss_pred CCCCeeeCCCchhhhcc
Q 009965 500 EDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 500 ~~~~~kl~DfGla~~~~ 516 (521)
+++.+||+|||+++.+.
T Consensus 169 ~~~~~kL~Dfg~~~~~~ 185 (314)
T cd05099 169 EDNVMKIADFGLARGVH 185 (314)
T ss_pred CCCcEEEcccccccccc
Confidence 99999999999998654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.3e-22 Score=193.86 Aligned_cols=143 Identities=17% Similarity=0.269 Sum_probs=119.5
Q ss_pred chhCcCCCeeEEEEEeCC-C-------CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCce
Q 009965 364 NIIGSSPDSLVYKGTMKG-G-------PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~-~-------~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 435 (521)
+.||+|+||.||+|.... + ..+++|.+... .....+++.+|+.+++.++||||+++++++.... ..
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~--~~ 74 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS----HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGD--ES 74 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch----hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCC--Cc
Confidence 469999999999998742 2 24777766322 1234467889999999999999999999998766 78
Q ss_pred EEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCC--------eeeC
Q 009965 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS--------PKVS 507 (521)
Q Consensus 436 ~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~--------~kl~ 507 (521)
++||||+++|+|.++++.+. ..++|..+.+++.|++.||+|||+. +|+||||||+||+++.++. ++++
T Consensus 75 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~ 150 (258)
T cd05078 75 IMVQEYVKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLS 150 (258)
T ss_pred EEEEecCCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEec
Confidence 99999999999999997443 3589999999999999999999998 9999999999999987765 5999
Q ss_pred CCchhhhcc
Q 009965 508 PLCLSFLLV 516 (521)
Q Consensus 508 DfGla~~~~ 516 (521)
|||++....
T Consensus 151 d~g~~~~~~ 159 (258)
T cd05078 151 DPGISITVL 159 (258)
T ss_pred ccccccccC
Confidence 999887543
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.6e-22 Score=198.58 Aligned_cols=146 Identities=24% Similarity=0.274 Sum_probs=123.7
Q ss_pred hchhCcCCCeeEEEEEeCC--------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCC
Q 009965 363 SNIIGSSPDSLVYKGTMKG--------GPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPF 433 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~~--------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 433 (521)
.+.||+|+||.||+++..+ +..||+|.+.... .....+++.+|+.++.++ +||||++++++|...+
T Consensus 17 ~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-- 91 (334)
T cd05100 17 GKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA---TDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG-- 91 (334)
T ss_pred cceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc---CHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC--
Confidence 4789999999999997531 2368898764321 123346789999999999 8999999999998776
Q ss_pred ceEEEEecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeec
Q 009965 434 TRMLVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT 499 (521)
Q Consensus 434 ~~~lv~ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld 499 (521)
..++++||+++|+|.+++.... ...++|.++..++.|+++||+|||+. +++||||||+|||++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEc
Confidence 7899999999999999986421 23589999999999999999999998 999999999999999
Q ss_pred CCCCeeeCCCchhhhcc
Q 009965 500 EDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 500 ~~~~~kl~DfGla~~~~ 516 (521)
+++.+||+|||+++.+.
T Consensus 169 ~~~~~kL~Dfg~~~~~~ 185 (334)
T cd05100 169 EDNVMKIADFGLARDVH 185 (334)
T ss_pred CCCcEEECCcccceecc
Confidence 99999999999998654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-21 Score=193.41 Aligned_cols=142 Identities=21% Similarity=0.175 Sum_probs=124.9
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. ++..+++|.+.... ....+.+.+|+.+++.++||||+++++++..++ ..++||||+
T Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 91 (292)
T cd06644 18 GELGDGAFGKVYKAKNKETGALAAAKVIETKS----EEELEDYMVEIEILATCNHPYIVKLLGAFYWDG--KLWIMIEFC 91 (292)
T ss_pred heecCCCCeEEEEEEECCCCceEEEEEeccCC----HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCC--eEEEEEecC
Confidence 67999999999999986 57889999875332 234567889999999999999999999998776 799999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
++++|..++.... ..+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||+++..
T Consensus 92 ~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 160 (292)
T cd06644 92 PGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKN 160 (292)
T ss_pred CCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceec
Confidence 9999998875332 3589999999999999999999998 9999999999999999999999999988753
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.2e-22 Score=196.65 Aligned_cols=143 Identities=22% Similarity=0.279 Sum_probs=118.3
Q ss_pred chhCcCCCeeEEEEEeCC---CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEe
Q 009965 364 NIIGSSPDSLVYKGTMKG---GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~---~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
.+||+|+||.||+|+..+ +..||+|.+.... ....+.+|+.++.+++||||+++++++........++|+|
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG------ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFD 80 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC------CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEe
Confidence 579999999999998753 4689999874321 1235788999999999999999999986544346899999
Q ss_pred cCCCCChhhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee----cCCCCeeeCCC
Q 009965 441 YASNGTLYEHLHYG-------ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL----TEDFSPKVSPL 509 (521)
Q Consensus 441 y~~~gsL~~~l~~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLl----d~~~~~kl~Df 509 (521)
|+++ +|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+|||+ ++++.+||+||
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07867 81 YAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred eeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeec
Confidence 9975 888877421 123588999999999999999999998 99999999999999 56779999999
Q ss_pred chhhhcc
Q 009965 510 CLSFLLV 516 (521)
Q Consensus 510 Gla~~~~ 516 (521)
|+++.+.
T Consensus 157 G~a~~~~ 163 (317)
T cd07867 157 GFARLFN 163 (317)
T ss_pred cceeccC
Confidence 9998764
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-21 Score=190.49 Aligned_cols=142 Identities=18% Similarity=0.221 Sum_probs=124.6
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.+|+|.+..... .....+.+|+.++..++||||+++++++...+ ..++|+||+
T Consensus 15 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~----~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~--~~~lv~e~~ 88 (267)
T cd06645 15 QRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG----EDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRD--KLWICMEFC 88 (267)
T ss_pred HHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch----hHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC--EEEEEEecc
Confidence 78999999999999876 688999998754321 22345788999999999999999999998776 889999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.... .+++.+...++.|++.||+|||+. +++|+||||+||+++.++.+||+|||++..+.
T Consensus 89 ~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06645 89 GGGSLQDIYHVTG--PLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQIT 157 (267)
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEcc
Confidence 9999999986433 589999999999999999999999 99999999999999999999999999987543
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.87 E-value=1e-21 Score=194.73 Aligned_cols=141 Identities=16% Similarity=0.212 Sum_probs=124.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. +++.||+|.+..... ...+.+.+|+.+++.++||||+++++++.... ..++||||+
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~lv~e~~ 98 (297)
T cd06656 25 EKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ----PKKELIINEILVMRENKNPNIVNYLDSYLVGD--ELWVVMEYL 98 (297)
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEEEecCcc----chHHHHHHHHHHHHhCCCCCEeeEEEEEecCC--EEEEeeccc
Confidence 68999999999999975 789999998854322 22356889999999999999999999998876 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++... .+++.++..++.+++.||+|||+. +++||||||+||++++++.++|+|||+++...
T Consensus 99 ~~~~L~~~~~~~---~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~ 166 (297)
T cd06656 99 AGGSLTDVVTET---CMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 166 (297)
T ss_pred CCCCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEcc
Confidence 999999998532 478999999999999999999998 99999999999999999999999999987653
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-21 Score=192.36 Aligned_cols=142 Identities=20% Similarity=0.254 Sum_probs=124.9
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|... ++..||+|.+..... ....+.+.+|+.++++++||||+++++++...+ ..++||||+
T Consensus 10 ~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 84 (277)
T cd06642 10 ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA---EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGT--KLWIIMEYL 84 (277)
T ss_pred HHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc---hHHHHHHHHHHHHHHcCCCCccHhhhcccccCC--ceEEEEEcc
Confidence 67999999999999876 578899998743221 223467899999999999999999999998776 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++.. ..+++..+..++.++++|++|||+. +++|+||+|+||++++++.++|+|||+++.+.
T Consensus 85 ~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06642 85 GGGSALDLLKP---GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLT 152 (277)
T ss_pred CCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEcccccccccc
Confidence 99999999853 3489999999999999999999998 99999999999999999999999999997654
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-21 Score=193.96 Aligned_cols=144 Identities=22% Similarity=0.337 Sum_probs=124.0
Q ss_pred chhCcCCCeeEEEEEeCC-----------------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeE
Q 009965 364 NIIGSSPDSLVYKGTMKG-----------------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGY 426 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~-----------------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~ 426 (521)
+.||+|+||.||+++..+ +..||+|.+.... .....++|.+|++++.+++||||++++++
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~ 87 (296)
T cd05051 11 EKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA---SDNAREDFLKEVKILSRLSDPNIARLLGV 87 (296)
T ss_pred ccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc---CHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence 789999999999998753 2357888874322 12345679999999999999999999999
Q ss_pred EecCCCCceEEEEecCCCCChhhhhccCC---------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCee
Q 009965 427 CRESSPFTRMLVFDYASNGTLYEHLHYGE---------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVY 497 (521)
Q Consensus 427 ~~~~~~~~~~lv~ey~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiL 497 (521)
+..+. ..++++||+++++|.+++.... ...+++..+..++.|++.||+|||+. +++||||||+||+
T Consensus 88 ~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~Nil 162 (296)
T cd05051 88 CTVDP--PLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATRNCL 162 (296)
T ss_pred EecCC--CcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchhcee
Confidence 98776 7899999999999999986433 12589999999999999999999998 9999999999999
Q ss_pred ecCCCCeeeCCCchhhhc
Q 009965 498 LTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 498 ld~~~~~kl~DfGla~~~ 515 (521)
+++++.++|+|||+++.+
T Consensus 163 i~~~~~~~l~dfg~~~~~ 180 (296)
T cd05051 163 VGKNYTIKIADFGMSRNL 180 (296)
T ss_pred ecCCCceEEccccceeec
Confidence 999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.87 E-value=4e-22 Score=193.01 Aligned_cols=143 Identities=24% Similarity=0.291 Sum_probs=123.7
Q ss_pred hchhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEec
Q 009965 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
.+.||+|+||+||+++.. +++.+|+|.+...... ........+|+.++.+++||||+++++++.... ..++||||
T Consensus 4 ~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~--~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~--~~~~v~~~ 79 (260)
T PF00069_consen 4 VKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIE--EEEREENIREIKILRRLRHPNIVQILDVFQDDN--YLYIVMEY 79 (260)
T ss_dssp EEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHH--HHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESS--EEEEEEEE
T ss_pred eEEEEeCCCEEEEEEEECCCCeEEEEEEecccccc--ccccchhhhhhhccccccccccccccccccccc--cccccccc
Confidence 368999999999999997 4568999998544321 222234456999999999999999999998876 88999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
+++++|.+++. ....+++..+..++.|+++||+|||+. +++|+||||+||++++++.++|+|||.+..
T Consensus 80 ~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~ 147 (260)
T PF00069_consen 80 CPGGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVK 147 (260)
T ss_dssp ETTEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEE
T ss_pred ccccccccccc--ccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccc
Confidence 99999999996 223589999999999999999999999 999999999999999999999999999874
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-21 Score=198.41 Aligned_cols=145 Identities=21% Similarity=0.169 Sum_probs=121.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCC----CCceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----PFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~~~~lv 438 (521)
+.||+|+||.||+|... ++..||||++..... .....+.+.+|+.++.+++||||+++++++.... ....+++
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~ 98 (343)
T cd07878 21 TPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ--SLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLV 98 (343)
T ss_pred eecccCCCeEEEEEEECCCCCEEEEEEeCchhh--hhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEE
Confidence 78999999999999875 678999998843221 1223456788999999999999999999875432 1246899
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
+|++ +++|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 99 ~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~ 170 (343)
T cd07878 99 TNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLARQADD 170 (343)
T ss_pred eecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCCccceecCC
Confidence 9998 6799888753 2489999999999999999999998 999999999999999999999999999987654
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-21 Score=194.01 Aligned_cols=141 Identities=16% Similarity=0.219 Sum_probs=124.2
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||+|+.. +++.+++|.+...... ..+.+.+|+.++..++||||+++++++.... ..++||||+
T Consensus 26 ~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~----~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~--~~~lv~e~~ 99 (296)
T cd06654 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP----KKELIINEILVMRENKNPNIVNYLDSYLVGD--ELWVVMEYL 99 (296)
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc----hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC--EEEEeeccc
Confidence 67999999999999875 6889999988543221 2356889999999999999999999998766 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++... .+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 100 ~~~~L~~~~~~~---~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~ 167 (296)
T cd06654 100 AGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167 (296)
T ss_pred CCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhcc
Confidence 999999998532 478999999999999999999998 99999999999999999999999999987643
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.2e-22 Score=193.78 Aligned_cols=145 Identities=19% Similarity=0.265 Sum_probs=126.2
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||+|+.. ++..||||++...... ....+.+.+|++++.+++||||+++++++.+.+ ..++||||+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e~~ 81 (284)
T cd07860 6 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET--EGVPSTAIREISLLKELNHPNIVKLLDVIHTEN--KLYLVFEFL 81 (284)
T ss_pred eeecCCCceEEEEEEECCCCCEEEEEEccccccc--cccchHHHHHHHHHHhcCCCCCcchhhhcccCC--cEEEEeecc
Confidence 67999999999999886 6889999987543221 223356889999999999999999999998776 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+ ++|.+++.......+++..+..++.++++||+|||+. +++||||+|+||++++++.+||+|||+++.+.
T Consensus 82 ~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~ 151 (284)
T cd07860 82 H-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 151 (284)
T ss_pred c-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcc
Confidence 6 6899998755555689999999999999999999998 99999999999999999999999999988654
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.4e-21 Score=189.05 Aligned_cols=146 Identities=19% Similarity=0.248 Sum_probs=128.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. +++.+|+|.+..... .....+++.+|+.++++++||||+++.+++.+.+ ..++|+||+
T Consensus 6 ~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~e~~ 81 (256)
T cd08218 6 KKIGEGSFGKAILVKSKEDGKQYVIKEINISKM--SPKEREESRKEVAVLSNMKHPNIVQYQESFEENG--NLYIVMDYC 81 (256)
T ss_pred EEeccCCceEEEEEEEcCCCCEEEEEEEEhHhC--ChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCC--eEEEEEecC
Confidence 78999999999999886 688999999854321 2234457899999999999999999999998876 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++.......+++.++.+++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++..+.
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~ 152 (256)
T cd08218 82 EGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLN 152 (256)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecC
Confidence 999999999754444689999999999999999999998 99999999999999999999999999987653
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-21 Score=192.16 Aligned_cols=143 Identities=22% Similarity=0.306 Sum_probs=123.1
Q ss_pred chhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEE
Q 009965 364 NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
..||+|+||.||++... ++..+|+|.+... .....+.|.+|++++..++|+||+++++++.+.. ..++
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~l 84 (280)
T cd05092 11 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA----SESARQDFQREAELLTVLQHQHIVRFYGVCTEGR--PLLM 84 (280)
T ss_pred cccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC----CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCC--ceEE
Confidence 78999999999999642 3557888876422 2234567999999999999999999999998776 7899
Q ss_pred EEecCCCCChhhhhccCCC-------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCe
Q 009965 438 VFDYASNGTLYEHLHYGER-------------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSP 504 (521)
Q Consensus 438 v~ey~~~gsL~~~l~~~~~-------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~ 504 (521)
++||+++|+|.++++.... ..++|.++..++.|++.|++|||+. +++||||||+||++++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCCCE
Confidence 9999999999999864321 3489999999999999999999998 99999999999999999999
Q ss_pred eeCCCchhhhc
Q 009965 505 KVSPLCLSFLL 515 (521)
Q Consensus 505 kl~DfGla~~~ 515 (521)
||+|||+++.+
T Consensus 162 kL~dfg~~~~~ 172 (280)
T cd05092 162 KIGDFGMSRDI 172 (280)
T ss_pred EECCCCceeEc
Confidence 99999998754
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1e-21 Score=191.73 Aligned_cols=144 Identities=19% Similarity=0.237 Sum_probs=123.0
Q ss_pred hchhCcCCCeeEEEEEeCC----CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEE
Q 009965 363 SNIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
.+.||+|+||.||+|...+ ...|++|...... .....+.+.+|+.++++++||||+++++++.+. ..++|
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~---~~~lv 84 (270)
T cd05056 11 GRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT---SPSVREKFLQEAYIMRQFDHPHIVKLIGVITEN---PVWIV 84 (270)
T ss_pred eeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC---CHHHHHHHHHHHHHHHhCCCCchhceeEEEcCC---CcEEE
Confidence 4789999999999998753 2468888764322 123456799999999999999999999998764 47899
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|||+++|+|.+++.... ..+++.++..++.+++.||+|||+. +++||||||+||+++.++.+||+|||+++.+.
T Consensus 85 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 158 (270)
T cd05056 85 MELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLE 158 (270)
T ss_pred EEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeecc
Confidence 99999999999996433 3589999999999999999999998 99999999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.3e-22 Score=195.34 Aligned_cols=156 Identities=18% Similarity=0.180 Sum_probs=127.7
Q ss_pred HHHHHHHhhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEe
Q 009965 353 QELEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCR 428 (521)
Q Consensus 353 ~~l~~~~~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~ 428 (521)
+++.++.++|. +.||+|+||.||+++.. +++.+|+|.+.... ....++.+|+.++.++ +||||+++++++.
T Consensus 11 ~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 85 (286)
T cd06638 11 DSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-----DIDEEIEAEYNILKALSDHPNVVKFYGMYY 85 (286)
T ss_pred ecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-----chHHHHHHHHHHHHHHhcCCCeeeeeeeee
Confidence 44445556665 78999999999999886 67889999864321 1234688899999999 6999999999885
Q ss_pred cC---CCCceEEEEecCCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCC
Q 009965 429 ES---SPFTRMLVFDYASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503 (521)
Q Consensus 429 ~~---~~~~~~lv~ey~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~ 503 (521)
.. .....++||||+++|+|.++++. .....+++..+..++.|+++||.|||+. +++||||||+||++++++.
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~ 162 (286)
T cd06638 86 KKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGG 162 (286)
T ss_pred ecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCC
Confidence 32 12268999999999999998753 2234589999999999999999999998 9999999999999999999
Q ss_pred eeeCCCchhhhcc
Q 009965 504 PKVSPLCLSFLLV 516 (521)
Q Consensus 504 ~kl~DfGla~~~~ 516 (521)
+||+|||+++.+.
T Consensus 163 ~kl~dfg~~~~~~ 175 (286)
T cd06638 163 VKLVDFGVSAQLT 175 (286)
T ss_pred EEEccCCceeecc
Confidence 9999999987654
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.6e-21 Score=194.96 Aligned_cols=147 Identities=21% Similarity=0.155 Sum_probs=128.9
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||+|... ++..+|+|.+...... .....+.+..|++++..++||||+++++.+.... ..++||||+
T Consensus 7 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~e~~ 83 (316)
T cd05574 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMI-KRNKVKRVLTEQEILATLDHPFLPTLYASFQTET--YLCLVMDYC 83 (316)
T ss_pred eeecCCccEEEEEEEEcCCCcEEEEEEEeccccc-hHHHHHHHHHHHHHHHhCCCCCchhheeeeecCC--EEEEEEEec
Confidence 67999999999999987 5889999998644321 1234467899999999999999999999998776 799999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++.......+++..+..++.|+++||+|||+. +++||||||+||++++++.++|+|||++....
T Consensus 84 ~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 154 (316)
T cd05574 84 PGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSD 154 (316)
T ss_pred CCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhccc
Confidence 999999999754445689999999999999999999998 99999999999999999999999999988654
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-21 Score=190.41 Aligned_cols=147 Identities=22% Similarity=0.269 Sum_probs=126.7
Q ss_pred hchhCcCCCeeEEEEEeC-CCCEEEEEEeeeecccc-----chhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceE
Q 009965 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW-----TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
...||+|++|.||+|... +++.+|+|.+....... .....+.+.+|+.++.+++||||+++++++.+.. ..+
T Consensus 5 ~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~ 82 (267)
T cd06628 5 GALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDAD--HLN 82 (267)
T ss_pred cceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC--ccE
Confidence 367999999999999875 67899999875433221 1122356889999999999999999999998876 789
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+|+||+++++|.+++... ..+++..+..++.+++.||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 83 lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06628 83 IFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISKKLE 157 (267)
T ss_pred EEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCCcccc
Confidence 999999999999999643 3588999999999999999999998 99999999999999999999999999988765
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1e-21 Score=205.00 Aligned_cols=141 Identities=17% Similarity=0.223 Sum_probs=115.9
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCC------CCceE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS------PFTRM 436 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------~~~~~ 436 (521)
++||+|+||.||+|+.. +++.||||++.... ....+|+.+++.++|||||++.+++.... ....+
T Consensus 72 ~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~--------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~ 143 (440)
T PTZ00036 72 NIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP--------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLN 143 (440)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEecCc--------chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEE
Confidence 78999999999999986 68899999874221 12457999999999999999999874321 11367
Q ss_pred EEEecCCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCC-CeeeCCCchhh
Q 009965 437 LVFDYASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-SPKVSPLCLSF 513 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~-~~kl~DfGla~ 513 (521)
+||||+++ ++.+++.. .....+++.....++.|+++||+|||+. +|+||||||+|||++.++ .+||+|||+|+
T Consensus 144 lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DFGla~ 219 (440)
T PTZ00036 144 VVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDFGSAK 219 (440)
T ss_pred EEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeeccccch
Confidence 89999985 78777642 2334689999999999999999999998 999999999999999664 79999999998
Q ss_pred hcc
Q 009965 514 LLV 516 (521)
Q Consensus 514 ~~~ 516 (521)
.+.
T Consensus 220 ~~~ 222 (440)
T PTZ00036 220 NLL 222 (440)
T ss_pred hcc
Confidence 654
|
|
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.6e-21 Score=191.80 Aligned_cols=143 Identities=15% Similarity=0.154 Sum_probs=125.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||++... ++..+|+|.+.... .....+.+.+|++++..++||||+++++++...+ ..++||||+
T Consensus 11 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 85 (284)
T cd06620 11 SDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA---KSSVRKQILRELQIMHECRSPYIVSFYGAFLNEN--NICMCMEFM 85 (284)
T ss_pred HHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC---cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCC--EEEEEEecC
Confidence 78999999999999886 68889999875332 2234567899999999999999999999998876 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
++|+|.+++.... .+++..+..++.+++.||.|||+.. +++||||||+||++++++.++|+|||+++.+
T Consensus 86 ~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~ 154 (284)
T cd06620 86 DCGSLDRIYKKGG--PIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGEL 154 (284)
T ss_pred CCCCHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccch
Confidence 9999999986433 5899999999999999999999732 7999999999999999999999999998754
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-21 Score=194.54 Aligned_cols=143 Identities=24% Similarity=0.334 Sum_probs=120.8
Q ss_pred chhCcCCCeeEEEEEeC-CCC----EEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGP----EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~----~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||+|... ++. .+|+|.+.... ......++.+|+.++++++||||++++|+|... ..+++
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~---~~~~v 86 (303)
T cd05110 13 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT---GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP---TIQLV 86 (303)
T ss_pred cccccCCCccEEEEEEecCCCcceeeEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC---Cceee
Confidence 68999999999999875 444 46777763221 123344689999999999999999999999764 36799
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 87 ~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~ 160 (303)
T cd05110 87 TQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLE 160 (303)
T ss_pred ehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEcccccccccc
Confidence 99999999999986433 3589999999999999999999998 99999999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-21 Score=192.52 Aligned_cols=146 Identities=16% Similarity=0.157 Sum_probs=126.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||++... ++..+|+|.+.... .......+.+|+.++.+++||||+++++++...+ ..++||||+
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv~e~~ 81 (286)
T cd06622 7 DELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL---DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEG--AVYMCMEYM 81 (286)
T ss_pred hhhcccCCeEEEEEEEcCCCcEEEEEEeeccc---CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCC--eEEEEEeec
Confidence 68999999999999987 78899999875321 1223457899999999999999999999998876 799999999
Q ss_pred CCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGE-RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++++|.++++... ...+++..+..++.++++||.|||+.+ +++||||||+||+++.++.+||+|||+++.+.
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 154 (286)
T cd06622 82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLV 154 (286)
T ss_pred CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 9999999986432 235899999999999999999999632 89999999999999999999999999987653
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-21 Score=193.28 Aligned_cols=142 Identities=22% Similarity=0.273 Sum_probs=123.3
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||+|+.+ +++.||+|.+...... .....+.+|++++++++|+||+++++++.+.+ ..++||||+
T Consensus 11 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 85 (291)
T cd07844 11 DKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE---GAPFTAIREASLLKDLKHANIVTLHDIIHTKK--TLTLVFEYL 85 (291)
T ss_pred EEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc---CCchhHHHHHHHHhhCCCcceeeEEEEEecCC--eEEEEEecC
Confidence 68999999999999987 6889999998543221 12235678999999999999999999998776 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
++ +|.+++.... ..+++.....++.|+++||.|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 86 ~~-~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 153 (291)
T cd07844 86 DT-DLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAK 153 (291)
T ss_pred CC-CHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECcccccccc
Confidence 85 9999886433 3689999999999999999999998 9999999999999999999999999998753
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.87 E-value=2e-21 Score=187.97 Aligned_cols=147 Identities=18% Similarity=0.235 Sum_probs=126.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||+++.. +++.+|+|++..+.. .....+.+.+|++++++++|+|++++.+.+...+ ...+++|||+
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~~lv~e~~ 82 (257)
T cd08223 6 RVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA--SRRERKAAEQEAQLLSQLKHPNIVAYRESWEGED-GLLYIVMGFC 82 (257)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc--CHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCC-CEEEEEeccc
Confidence 68999999999999986 578899999854322 2234556889999999999999999998876433 1578999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++.......+++.++..++.+++.|++|||+. +++||||||+||++++++.++|+|||+++.+.
T Consensus 83 ~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~ 153 (257)
T cd08223 83 EGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLE 153 (257)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEec
Confidence 999999999754455689999999999999999999999 99999999999999999999999999987654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.6e-21 Score=194.02 Aligned_cols=143 Identities=14% Similarity=0.062 Sum_probs=124.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. +++.|++|.+..... ......+.+.+|++++..++||||+++++.+...+ ..++||||+
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv~e~~ 83 (305)
T cd05609 7 KLISNGAYGAVYLVRHKETRQRFAMKKINKQNL-ILRNQIQQVFVERDILTFAENPFVVSMFCSFETKR--HLCMVMEYV 83 (305)
T ss_pred eEeecCCCeeEEEEEECCCCcEEEEEEeehhhh-hhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCC--EEEEEEecC
Confidence 78999999999999986 578899998754321 11233457889999999999999999999998776 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
++|+|.+++... ..+++..+..++.+++.||+|||+. +++||||||+||++++++.+||+|||+++.
T Consensus 84 ~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~ 150 (305)
T cd05609 84 EGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKI 150 (305)
T ss_pred CCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccc
Confidence 999999999643 3589999999999999999999998 999999999999999999999999999874
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.9e-21 Score=188.05 Aligned_cols=142 Identities=22% Similarity=0.321 Sum_probs=124.9
Q ss_pred hchhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
.+.||+|+||.||++.+.++..+|+|.+..... ...+|.+|++++.+++|||++++++++.... ..++|+||+
T Consensus 9 ~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~v~e~~ 81 (256)
T cd05112 9 VQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-----SEEDFIEEAQVMMKLSHPKLVQLYGVCTERS--PICLVFEFM 81 (256)
T ss_pred EeeecCcccceEEEEEEeCCCeEEEEECCCCCC-----CHHHHHHHHHHHHhCCCCCeeeEEEEEccCC--ceEEEEEcC
Confidence 378999999999999988788899998743221 2346899999999999999999999998776 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
++|+|.+++.... ..++|..+..++.+++.|++|||+. +++||||||+||+++.++.+||+|||+++..
T Consensus 82 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~ 150 (256)
T cd05112 82 EHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFV 150 (256)
T ss_pred CCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeec
Confidence 9999999986433 3589999999999999999999998 9999999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.4e-21 Score=192.50 Aligned_cols=147 Identities=24% Similarity=0.282 Sum_probs=120.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc---CCCCccceeeEEecCC---CCceE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI---NHENTGKLLGYCRESS---PFTRM 436 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~~~---~~~~~ 436 (521)
+.||+|+||+||+|+.. +++.||+|.+...... ......+.+|+.++..+ +||||+++++++.... ....+
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~ 83 (288)
T cd07863 6 AEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNE--DGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVT 83 (288)
T ss_pred eEEeecCCeEEEEEEECCCCcEEEEEEeccCcCC--CCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEE
Confidence 67999999999999887 6889999988543221 11223456677776655 7999999999986432 22579
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+||||+++ +|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 84 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~ 159 (288)
T cd07863 84 LVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGLARIYS 159 (288)
T ss_pred EEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCcccccc
Confidence 99999985 899998755445689999999999999999999999 99999999999999999999999999998764
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.86 E-value=1e-21 Score=193.97 Aligned_cols=159 Identities=21% Similarity=0.202 Sum_probs=131.6
Q ss_pred cCHHHHHHHHhhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceee
Q 009965 350 FSRQELEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLG 425 (521)
Q Consensus 350 ~~~~~l~~~~~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g 425 (521)
++.+++.+++++|. +.||+|+||.||++... +++.+|+|.+.... .....+.+|+.++.++ +|||++++++
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-----~~~~~~~~e~~~l~~l~~h~ni~~~~~ 86 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-----DVDEEIEAEYNILQSLPNHPNVVKFYG 86 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-----cHHHHHHHHHHHHHHhcCCCCeEEEEE
Confidence 34455666667776 78999999999999985 68899999874321 1234678899999999 8999999999
Q ss_pred EEecCC---CCceEEEEecCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC
Q 009965 426 YCRESS---PFTRMLVFDYASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE 500 (521)
Q Consensus 426 ~~~~~~---~~~~~lv~ey~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~ 500 (521)
++...+ ....++|+||+++|+|.++++.. ....++|..+..++.|++.||+|||+. +++||||||+||++++
T Consensus 87 ~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~ 163 (291)
T cd06639 87 MFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTT 163 (291)
T ss_pred EEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcC
Confidence 987533 12579999999999999988631 234589999999999999999999998 9999999999999999
Q ss_pred CCCeeeCCCchhhhcc
Q 009965 501 DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 501 ~~~~kl~DfGla~~~~ 516 (521)
++.+||+|||+++.+.
T Consensus 164 ~~~~kl~dfg~~~~~~ 179 (291)
T cd06639 164 EGGVKLVDFGVSAQLT 179 (291)
T ss_pred CCCEEEeecccchhcc
Confidence 9999999999988654
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.2e-21 Score=189.50 Aligned_cols=146 Identities=18% Similarity=0.200 Sum_probs=125.6
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccc------cchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH------WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~------~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
+.||+|+||.||+|... +++.+|+|.+...... ......+.+.+|+.++.+++|||++++++++...+ ..+
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~ 84 (272)
T cd06629 7 ELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE--YLS 84 (272)
T ss_pred ceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC--ceE
Confidence 68999999999999875 6889999987532211 01112356888999999999999999999998776 789
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+||||+++|+|.++++.. ..+++..+..++.|++.||.|||+. +++||||+|+||++++++.++|+|||+++...
T Consensus 85 lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~ 159 (272)
T cd06629 85 IFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGISKKSD 159 (272)
T ss_pred EEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeecccccccc
Confidence 999999999999999654 3589999999999999999999998 99999999999999999999999999987653
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.6e-21 Score=192.81 Aligned_cols=140 Identities=19% Similarity=0.273 Sum_probs=123.6
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
..||+|+||.||++... ++..||+|.+.... ....+.+.+|+.++.+++||||+++++.+...+ ..++||||+
T Consensus 28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~--~~~lv~e~~ 101 (292)
T cd06658 28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK----QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGD--ELWVVMEFL 101 (292)
T ss_pred hcccCCCCeEEEEEEECCCCCEEEEEEEecch----HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCC--eEEEEEeCC
Confidence 56999999999999886 68899999874322 223456889999999999999999999998776 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
++++|.+++... .+++.++..++.+++.||+|||+. +|+||||||+||++++++.++|+|||+++.+
T Consensus 102 ~~~~L~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~ 168 (292)
T cd06658 102 EGGALTDIVTHT---RMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQV 168 (292)
T ss_pred CCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhc
Confidence 999999988532 489999999999999999999998 9999999999999999999999999998764
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.5e-22 Score=194.17 Aligned_cols=144 Identities=19% Similarity=0.313 Sum_probs=125.2
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|..+ +++.+|+|.+...... ....+.+.+|+++++.++||||+++++++.... ..++|+||+
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 82 (286)
T cd07846 7 GLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDD--KMVKKIAMREIRMLKQLRHENLVNLIEVFRRKK--RLYLVFEFV 82 (286)
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEeHhhccCc--chhhHHHHHHHHHHHhcCCcchhhHHHhcccCC--eEEEEEecC
Confidence 78999999999999987 5889999987433221 123456889999999999999999999998776 799999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++++|.++.... ..++|.++..++.|+++||+|||+. +++||||+|+||++++++.++|+|||+++.+.
T Consensus 83 ~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~ 151 (286)
T cd07846 83 DHTVLDDLEKYP--NGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLA 151 (286)
T ss_pred CccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeecc
Confidence 999998877533 2489999999999999999999998 99999999999999999999999999987653
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=3e-22 Score=203.66 Aligned_cols=145 Identities=21% Similarity=0.341 Sum_probs=127.8
Q ss_pred chhCcCCCeeEEEEEeC--CCC--EEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMK--GGP--EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~--~~~--~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
++||+|.||.|++|.|. +|+ .||||.+...... ....+|++|+.+|.+++|||+++|+|...+. ...+|+
T Consensus 116 e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~---~~mddflrEas~M~~L~H~hliRLyGvVl~q---p~mMV~ 189 (1039)
T KOG0199|consen 116 ELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLN---AIMDDFLREASHMLKLQHPHLIRLYGVVLDQ---PAMMVF 189 (1039)
T ss_pred HHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccc---hhHHHHHHHHHHHHhccCcceeEEeeeeccc---hhhHHh
Confidence 78999999999999885 343 6899988544332 2567899999999999999999999999874 478999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
|.++.|+|.+.|+......|-......++.|||.||.||..+ ++|||||.++|+|+-..-.+||+||||.|-+..
T Consensus 190 ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ 264 (1039)
T KOG0199|consen 190 ELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGE 264 (1039)
T ss_pred hhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCC
Confidence 999999999999874555688889999999999999999999 999999999999999999999999999997653
|
|
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.86 E-value=8e-22 Score=201.35 Aligned_cols=146 Identities=22% Similarity=0.213 Sum_probs=127.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-C-----CCccceeeEEecCCCCceE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-H-----ENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H-----~niv~l~g~~~~~~~~~~~ 436 (521)
++||+|+||.|.||... +++.||||+++.+.. ...+-..|+++|..++ | -|+|++++|+...+ +.+
T Consensus 192 e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-----f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~--Hlc 264 (586)
T KOG0667|consen 192 EVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-----FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRN--HLC 264 (586)
T ss_pred EEecccccceeEEEEecCCCcEEEEEeeccChH-----HHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccc--cee
Confidence 89999999999999886 689999999854432 2345678999999996 4 68999999999888 899
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCC--CCeeeCCCchhhh
Q 009965 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED--FSPKVSPLCLSFL 514 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~--~~~kl~DfGla~~ 514 (521)
||+|.++. +|+++++.+...+++......|+.||+.||.+||+. +|||+||||+||||-+- -.+||+|||.|.+
T Consensus 265 iVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~ 340 (586)
T KOG0667|consen 265 IVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGSSCF 340 (586)
T ss_pred eeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEecccccc
Confidence 99999987 999999988878899999999999999999999998 99999999999999643 4799999999988
Q ss_pred cccccc
Q 009965 515 LVSSII 520 (521)
Q Consensus 515 ~~~~~~ 520 (521)
.....+
T Consensus 341 ~~q~vy 346 (586)
T KOG0667|consen 341 ESQRVY 346 (586)
T ss_pred cCCcce
Confidence 766543
|
|
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.9e-21 Score=198.02 Aligned_cols=146 Identities=21% Similarity=0.236 Sum_probs=121.6
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC----
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP---- 432 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~---- 432 (521)
++|. +.||+|+||.||+++.. ++..||+|.+..... ......++.+|+.++..++||||+++++++.....
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 21 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ--NQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hceEEEEEeecCCCEEEEEEEEcCCCceeEEEEeccccc--chhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 4454 78999999999999886 688999999854321 12334568899999999999999999999864431
Q ss_pred CceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchh
Q 009965 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512 (521)
Q Consensus 433 ~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla 512 (521)
...++||||+++ ++.+.++. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg~a 170 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 170 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCCCc
Confidence 146999999975 67776642 378899999999999999999999 9999999999999999999999999999
Q ss_pred hhc
Q 009965 513 FLL 515 (521)
Q Consensus 513 ~~~ 515 (521)
+..
T Consensus 171 ~~~ 173 (359)
T cd07876 171 RTA 173 (359)
T ss_pred ccc
Confidence 764
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-21 Score=192.65 Aligned_cols=142 Identities=20% Similarity=0.236 Sum_probs=121.5
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|... ++..+|+|.+..+... .....+.+|+.+++.++|+||+++.+++.... ..++|+||+
T Consensus 11 ~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~--~~~lv~e~~ 85 (291)
T cd07870 11 EKLGEGSYATVYKGISRINGQLVALKVISMKTEE---GVPFTAIREASLLKGLKHANIVLLHDIIHTKE--TLTFVFEYM 85 (291)
T ss_pred EEEEecCCEEEEEEEEcCCCcEEEEEEecccCcC---CCcHHHHHHHHHHHhcCCCCEeEEEEEEecCC--eEEEEEecc
Confidence 68999999999999886 6889999998543221 22345788999999999999999999998776 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
+ +++.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++++||+|||+++..
T Consensus 86 ~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~ 153 (291)
T cd07870 86 H-TDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAK 153 (291)
T ss_pred c-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEecccccccc
Confidence 6 68887775332 3578888999999999999999998 9999999999999999999999999998754
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.7e-21 Score=187.75 Aligned_cols=144 Identities=15% Similarity=0.101 Sum_probs=125.8
Q ss_pred hCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCCC
Q 009965 366 IGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASN 444 (521)
Q Consensus 366 ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~~ 444 (521)
||.|++|.||+++.. ++..+|+|.+.... .......+.+.+|+.+++.++||||+++++++.+.. ..++|+||+++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~ 77 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRH-IVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKK--YIYMLMEYCLG 77 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhc-chhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCC--ccEEEEecCCC
Confidence 689999999999987 48899999885432 112234567999999999999999999999998776 78999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 445 GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 445 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
|+|.+++.... .+++..+..++.++++||+|||+. +++|+||||+||++++++.++|+|||+++.+..
T Consensus 78 ~~L~~~l~~~~--~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~ 145 (262)
T cd05572 78 GELWTILRDRG--LFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKS 145 (262)
T ss_pred CcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCc
Confidence 99999996443 489999999999999999999998 999999999999999999999999999987654
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-21 Score=199.38 Aligned_cols=135 Identities=14% Similarity=0.150 Sum_probs=118.0
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. ++..||+|..... ....|+.++.+++||||+++++++.... ..++|+||+
T Consensus 72 ~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~----------~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 139 (357)
T PHA03209 72 KTLTPGSEGRVFVATKPGQPDPVVLKIGQKG----------TTLIEAMLLQNVNHPSVIRMKDTLVSGA--ITCMVLPHY 139 (357)
T ss_pred EEecCCCCeEEEEEEECCCCceEEEEeCCcc----------ccHHHHHHHHhCCCCCCcChhheEEeCC--eeEEEEEcc
Confidence 78999999999999987 5678888864211 2356899999999999999999998876 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
. |+|.+++... ...++|..+..|+.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 140 ~-~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 207 (357)
T PHA03209 140 S-SDLYTYLTKR-SRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFP 207 (357)
T ss_pred C-CcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCcccccc
Confidence 5 5999988643 34689999999999999999999998 9999999999999999999999999999753
|
|
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.6e-21 Score=189.99 Aligned_cols=144 Identities=19% Similarity=0.095 Sum_probs=117.8
Q ss_pred hhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHh---ccCCCCccceeeEEecCCCCceEEEEe
Q 009965 365 IIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLA---RINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 365 ~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~---~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
+||+|+||.||++... +++.+|+|.+....... ......+.+|..++. ..+||||+.+.+++...+ ..++|||
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~lv~e 77 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM-KQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPD--KLCFILD 77 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEcccccc-chHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCC--eEEEEEe
Confidence 4899999999999986 68899999885432211 112233445544433 347999999999998776 7899999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|+++|+|.+++.... .++|..+..|+.|++.||+|||+. +|+||||||+|||+++++.++|+|||+++...
T Consensus 78 ~~~~~~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~ 148 (279)
T cd05633 78 LMNGGDLHYHLSQHG--VFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFS 148 (279)
T ss_pred cCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceecc
Confidence 999999999986443 489999999999999999999998 99999999999999999999999999987543
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.1e-21 Score=189.02 Aligned_cols=146 Identities=17% Similarity=0.214 Sum_probs=125.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccc--cchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEe
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH--WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
+.||+|++|.||++... ++..+|+|.+...... ......+.+.+|++++++++|+||+++++++.+.+ ..++|+|
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~~v~e 83 (268)
T cd06630 6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDS--HFNLFVE 83 (268)
T ss_pred ceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCC--eEEEEEe
Confidence 67999999999999874 7889999988543311 11224567899999999999999999999998776 7899999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCC-CeeeCCCchhhhcc
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-SPKVSPLCLSFLLV 516 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~-~~kl~DfGla~~~~ 516 (521)
|+++++|.+++... .++++..+..++.|++.||+|||+. +++|+||||+||+++.++ .+||+|||+++.+.
T Consensus 84 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~ 155 (268)
T cd06630 84 WMAGGSVSHLLSKY--GAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARLA 155 (268)
T ss_pred ccCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEcccccccccc
Confidence 99999999999643 3589999999999999999999998 999999999999998776 59999999987654
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-21 Score=191.27 Aligned_cols=144 Identities=24% Similarity=0.324 Sum_probs=121.8
Q ss_pred chhCcCCCeeEEEEEeCC-------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceE
Q 009965 364 NIIGSSPDSLVYKGTMKG-------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~-------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
+.||+|+||.||+|+..+ +..+|+|.+.... .......|.+|+.+++.++||||+++++++.... ..+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~ 75 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA---TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNE--PQY 75 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc---chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCC--CeE
Confidence 368999999999998753 2468888874321 1223457899999999999999999999998776 789
Q ss_pred EEEecCCCCChhhhhccC-----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCC-----Ceee
Q 009965 437 LVFDYASNGTLYEHLHYG-----ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-----SPKV 506 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~-----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~-----~~kl 506 (521)
+||||+++|+|.++++.. ....++|.++..++.|++.||+|||+. +++|+||||+||+++++. .+++
T Consensus 76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l 152 (269)
T cd05044 76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKI 152 (269)
T ss_pred EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEE
Confidence 999999999999999642 123479999999999999999999998 999999999999999877 8999
Q ss_pred CCCchhhhc
Q 009965 507 SPLCLSFLL 515 (521)
Q Consensus 507 ~DfGla~~~ 515 (521)
+|||+++.+
T Consensus 153 ~dfg~~~~~ 161 (269)
T cd05044 153 GDFGLARDI 161 (269)
T ss_pred CCccccccc
Confidence 999998754
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-21 Score=189.72 Aligned_cols=146 Identities=16% Similarity=0.121 Sum_probs=128.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. ++..+|+|.+..+. .......+.+.+|+.++++++||||+++++++.+.+ ..++|+||+
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 82 (258)
T cd05578 6 RVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQK-CVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEE--NMYLVVDLL 82 (258)
T ss_pred EEeccCCCceEEEEEEccCCcEEEEEEEehhh-hcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCC--eEEEEEeCC
Confidence 78999999999999987 68899999985432 122234567999999999999999999999998776 799999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++++|.+++... .++++..+..++.++++||+|||+. +++|+||||+||++++++.++|+|||++.....
T Consensus 83 ~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~ 152 (258)
T cd05578 83 LGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTP 152 (258)
T ss_pred CCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCC
Confidence 999999999644 3589999999999999999999998 999999999999999999999999999876543
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.9e-21 Score=191.86 Aligned_cols=146 Identities=16% Similarity=0.092 Sum_probs=124.9
Q ss_pred chhCcCCCeeEEEEEe----CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEE
Q 009965 364 NIIGSSPDSLVYKGTM----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||+++. .+|..||+|.+............+++.+|+.++.++ +|+||+++.+++..+. ..++|
T Consensus 6 ~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~--~~~lv 83 (290)
T cd05613 6 KVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDT--KLHLI 83 (290)
T ss_pred eeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCC--eEEEE
Confidence 6899999999999986 367899999985432222223345688999999999 6999999999988766 78999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|||+++|+|.+++... ..+++.+...++.|+++||+|||+. +++||||||+|||+++++.+||+|||+++.+.
T Consensus 84 ~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 156 (290)
T cd05613 84 LDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFH 156 (290)
T ss_pred EecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCccceecc
Confidence 9999999999999643 3588999999999999999999998 99999999999999999999999999988654
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.4e-21 Score=191.42 Aligned_cols=147 Identities=18% Similarity=0.177 Sum_probs=125.2
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|..+ +++.+++|.+...... ......+.+|+.++.+++||||+++++++........++||||+
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~ 88 (293)
T cd07843 11 NRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK--EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYV 88 (293)
T ss_pred hhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc--ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhc
Confidence 78999999999999987 6889999998544322 22234577899999999999999999999876333799999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++ +|.+++.... ..+++..+..++.|+++||+|||+. +++||||||+||++++++.+||+|||+++.+..
T Consensus 89 ~~-~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 89 EH-DLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYGS 158 (293)
T ss_pred Cc-CHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence 85 9999886433 3589999999999999999999998 999999999999999999999999999886543
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.9e-23 Score=188.35 Aligned_cols=145 Identities=21% Similarity=0.229 Sum_probs=124.6
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
++||+|.|+.||++... +|+.+|+|++..+... ....+++.+|+++.+.++|||||+|...+.+.. ..|||+|+|
T Consensus 17 e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~--~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~--~~ylvFe~m 92 (355)
T KOG0033|consen 17 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS--ARDFQKLEREARICRKLQHPNIVRLHDSIQEES--FHYLVFDLV 92 (355)
T ss_pred HHHccCchHHHHHHHhccchHHHHHHHhhhhhhc--cccHHHHHHHHHHHHhcCCCcEeehhhhhcccc--eeEEEEecc
Confidence 78999999999999775 7899999988655422 224567899999999999999999999998777 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC---CCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~---~~~~kl~DfGla~~~~~ 517 (521)
.+|+|..-+-.+ ...++......++||.++|.|+|.. +|||||+||+|+|+.. .-.+|++|||+|..+.+
T Consensus 93 ~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~ 165 (355)
T KOG0033|consen 93 TGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVND 165 (355)
T ss_pred cchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEEeCC
Confidence 999998777533 3478888999999999999999999 9999999999999953 34689999999988764
|
|
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.6e-21 Score=190.69 Aligned_cols=147 Identities=20% Similarity=0.202 Sum_probs=125.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||++... +++.+|+|.+..... .....++.+|++++++++||||++++++|.+......++||||+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~ 83 (287)
T cd06621 7 SRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN---PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYC 83 (287)
T ss_pred EEeccCCceEEEEEEECCCCeEEEEEEEecCCc---hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEec
Confidence 68999999999999986 678899998753321 13456789999999999999999999999765444689999999
Q ss_pred CCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++.. .....+++.....|+.|+++||+|||+. +++|+||+|+||++++++.++|+|||++....
T Consensus 84 ~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~ 156 (287)
T cd06621 84 EGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELV 156 (287)
T ss_pred CCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccccccc
Confidence 99999998753 2234588999999999999999999998 99999999999999999999999999987543
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.7e-21 Score=186.84 Aligned_cols=147 Identities=30% Similarity=0.449 Sum_probs=127.1
Q ss_pred hchhCcCCCeeEEEEEeCC-----CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEE
Q 009965 363 SNIIGSSPDSLVYKGTMKG-----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~~-----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
.+.||+|+||.||+++..+ +..||+|.+..... ....+.+..|++++..++|+||+++++++.+.+ ..++
T Consensus 4 ~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~ 78 (258)
T smart00219 4 GKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD---EQQIEEFLREARIMRKLDHPNIVKLLGVCTEEE--PLMI 78 (258)
T ss_pred cceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC---hHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC--eeEE
Confidence 3679999999999999864 37899998843221 124567999999999999999999999998876 7899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 438 v~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
+|||+++++|.+++.......+++.++..++.|++.||+|||+. +++||||||+||++++++.++|+|||+++....
T Consensus 79 i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 155 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYD 155 (258)
T ss_pred EEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceeccc
Confidence 99999999999999754433389999999999999999999999 999999999999999999999999999976543
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.9e-21 Score=185.72 Aligned_cols=142 Identities=18% Similarity=0.265 Sum_probs=126.4
Q ss_pred chhCcCCCeeEEEEEeCC-CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|...+ +..+++|.+.... ..+++.+|++++++++||||+++++++.+.. ..++++||+
T Consensus 9 ~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~------~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~--~~~l~~e~~ 80 (256)
T cd06612 9 EKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE------DLQEIIKEISILKQCDSPYIVKYYGSYFKNT--DLWIVMEYC 80 (256)
T ss_pred hhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH------HHHHHHHHHHHHHhCCCCcEeeeeeeeecCC--cEEEEEecC
Confidence 789999999999999874 7899999874321 1467999999999999999999999998876 799999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++++|.+++... ...++|..+..++.+++.||.|||+. +++||||+|+||++++++.+||+|||++..+..
T Consensus 81 ~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~ 151 (256)
T cd06612 81 GAGSVSDIMKIT-NKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTD 151 (256)
T ss_pred CCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhccc
Confidence 999999998633 34689999999999999999999998 999999999999999999999999999887543
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.5e-21 Score=191.92 Aligned_cols=141 Identities=16% Similarity=0.231 Sum_probs=124.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
..||+|+||.||++... +++.||+|.+..+.. ...+.+.+|+.++..++||||+++++++...+ ..++|+||+
T Consensus 27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~----~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~--~~~iv~e~~ 100 (297)
T cd06659 27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ----QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGE--ELWVLMEFL 100 (297)
T ss_pred hhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc----chHHHHHHHHHHHHhCCCCchhhhhhheeeCC--eEEEEEecC
Confidence 47999999999999886 688999999854322 22456889999999999999999999998776 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++.. ..+++.++..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 101 ~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~ 168 (297)
T cd06659 101 QGGALTDIVSQ---TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQIS 168 (297)
T ss_pred CCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhcc
Confidence 99999998753 2489999999999999999999998 99999999999999999999999999987543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.5e-21 Score=190.11 Aligned_cols=145 Identities=16% Similarity=0.159 Sum_probs=120.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHH-HhccCCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVAD-LARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~-l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+++.. +|..||+|++...... ....++..|+.. ++..+||||+++++++...+ ..+++|||
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~--~~~lv~e~ 81 (283)
T cd06617 7 EELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS---QEQKRLLMDLDISMRSVDCPYTVTFYGALFREG--DVWICMEV 81 (283)
T ss_pred EEecccCCeEEEEEEEcCCCcEEEEEEEecCCCc---HHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCC--cEEEEhhh
Confidence 67999999999999986 6899999988543211 223456666665 55668999999999998776 78999999
Q ss_pred CCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 442 ASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++ |+|.+++... ....+++.++..++.|++.||+|||+.+ +++||||||+||++++++.+||+|||+++.+.
T Consensus 82 ~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~ 155 (283)
T cd06617 82 MD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLV 155 (283)
T ss_pred hc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecccccccc
Confidence 97 5888887532 2346899999999999999999999753 79999999999999999999999999988653
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.9e-21 Score=197.80 Aligned_cols=148 Identities=18% Similarity=0.203 Sum_probs=122.8
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC----
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP---- 432 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~---- 432 (521)
++|. +.||+|+||.||++... .++.||||++..... .....+.+.+|+.+++.++||||+++++++.....
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ--NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCccc--ChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4554 78999999999999876 688999998853321 22334568899999999999999999999864321
Q ss_pred CceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchh
Q 009965 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512 (521)
Q Consensus 433 ~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla 512 (521)
...++||||+++ ++.+++.. .+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||++
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg~~ 166 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 166 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCccc
Confidence 146999999975 77777642 378999999999999999999998 9999999999999999999999999999
Q ss_pred hhccc
Q 009965 513 FLLVS 517 (521)
Q Consensus 513 ~~~~~ 517 (521)
+....
T Consensus 167 ~~~~~ 171 (355)
T cd07874 167 RTAGT 171 (355)
T ss_pred ccCCC
Confidence 87644
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.6e-21 Score=213.57 Aligned_cols=151 Identities=13% Similarity=0.125 Sum_probs=123.9
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
..||+|+||+||+++.. ++..+|+|.+.... ........|..|+.++.+++|||||++++++........+|||||+
T Consensus 19 ~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~--l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~ 96 (1021)
T PTZ00266 19 KKIGNGRFGEVFLVKHKRTQEFFCWKAISYRG--LKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFC 96 (1021)
T ss_pred EEEecCCCeEEEEEEECCCCeEEEEEEEeccc--cCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCC
Confidence 78999999999999986 56788898875432 1223456789999999999999999999998654433689999999
Q ss_pred CCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCC----CCeEecCCCCCCeeecCC---------------
Q 009965 443 SNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELG----PPFTISELNSSAVYLTED--------------- 501 (521)
Q Consensus 443 ~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~----~~ivH~Dlk~~NiLld~~--------------- 501 (521)
++|+|.++|... ....+++..++.|+.||+.||+|||+... .+||||||||+||||+.+
T Consensus 97 ~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~n 176 (1021)
T PTZ00266 97 DAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLN 176 (1021)
T ss_pred CCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccC
Confidence 999999999642 22468999999999999999999998521 259999999999999642
Q ss_pred --CCeeeCCCchhhhcc
Q 009965 502 --FSPKVSPLCLSFLLV 516 (521)
Q Consensus 502 --~~~kl~DfGla~~~~ 516 (521)
..+||+|||+++.+.
T Consensus 177 g~~iVKLsDFGlAr~l~ 193 (1021)
T PTZ00266 177 GRPIAKIGDFGLSKNIG 193 (1021)
T ss_pred CCCceEEccCCcccccc
Confidence 348999999998754
|
|
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.8e-21 Score=186.66 Aligned_cols=144 Identities=22% Similarity=0.258 Sum_probs=127.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|... +++.+++|.+...... ....+.+.+|+.++++++|+||+++++++...+ ..++|+||+
T Consensus 6 ~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~--~~~lv~e~~ 81 (264)
T cd06626 6 NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND--PKTIKEIADEMKVLELLKHPNLVKYYGVEVHRE--KVYIFMEYC 81 (264)
T ss_pred eEeecCCCcEEEEEEECCCCcEEEEEEEECcccc--hHHHHHHHHHHHHHHhCCCCChhheeeeEecCC--EEEEEEecC
Confidence 67999999999999886 6889999998544322 335678999999999999999999999988776 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++.... .+++..+..|+.++++||+|||+. +++|+||+|+||++++++.+||+|||++..+.
T Consensus 82 ~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~ 150 (264)
T cd06626 82 SGGTLEELLEHGR--ILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLK 150 (264)
T ss_pred CCCcHHHHHhhcC--CCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccC
Confidence 9999999996433 478999999999999999999998 99999999999999999999999999988764
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.9e-21 Score=186.40 Aligned_cols=152 Identities=19% Similarity=0.182 Sum_probs=127.0
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.+|+|+||.||++... ++..+|+|.+.... ......+++..|+.++++++||||+++++++........+++|||+
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~ 83 (265)
T cd08217 6 ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGN--MTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYC 83 (265)
T ss_pred eeeccCCCeEEEEeeecCCCCEEEEEEEeccc--CCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhc
Confidence 67999999999999876 67889999875432 2233456788999999999999999999988754433679999999
Q ss_pred CCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCC--CCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTEL--GPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++++|.+++... ...++++..+..++.++++||+|||..+ ..+++|+||||+||++++++.+||+|||+++.+..
T Consensus 84 ~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~ 162 (265)
T cd08217 84 EGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGH 162 (265)
T ss_pred cCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccC
Confidence 999999998642 2356899999999999999999999321 23999999999999999999999999999987653
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.9e-21 Score=191.16 Aligned_cols=144 Identities=15% Similarity=0.224 Sum_probs=124.2
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +|..+|+|.+...... ......+.+|+.++.+++||||+++++++.+.. ..++|+||+
T Consensus 6 ~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~--~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 81 (284)
T cd07839 6 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD--EGVPSSALREICLLKELKHKNIVRLYDVLHSDK--KLTLVFEYC 81 (284)
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEeeccccc--ccCccchhHHHHHHHhcCCCCeeeHHHHhccCC--ceEEEEecC
Confidence 67999999999999986 6889999998543221 222346788999999999999999999998776 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+ ++|.+++.... ..+++..+..++.||++||+|||+. +++||||||+||+++.++.+||+|||+++.+.
T Consensus 82 ~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~ 150 (284)
T cd07839 82 D-QDLKKYFDSCN-GDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFG 150 (284)
T ss_pred C-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccC
Confidence 7 58888876432 3589999999999999999999998 99999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.6e-21 Score=187.05 Aligned_cols=147 Identities=17% Similarity=0.257 Sum_probs=127.0
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|..+ +|..+|+|.+..... .....+.+.+|+.++++++|+||+++++++.... ..++|+||+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~--~~~lv~e~~ 81 (257)
T cd08225 6 KKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKM--PVKEKEASKKEVILLAKMKHPNIVTFFASFQENG--RLFIVMEYC 81 (257)
T ss_pred EEecCCCcceEEEEEEcCCCceEEEEEeeHhhc--cchhhHHHHHHHHHHHhCCCCChhhhhheeccCC--eEEEEEecC
Confidence 78999999999999987 578899998754321 1223456889999999999999999999998876 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCC-CeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-SPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~-~~kl~DfGla~~~~~ 517 (521)
++++|.+++.......++|..+..++.++++||+|||+. +++|+||||+||++++++ .+||+|||.+..+.+
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~ 154 (257)
T cd08225 82 DGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLND 154 (257)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccC
Confidence 999999999755545689999999999999999999998 999999999999999875 469999999876643
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.4e-21 Score=189.24 Aligned_cols=157 Identities=22% Similarity=0.243 Sum_probs=128.9
Q ss_pred HHHHHHHHhhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEE
Q 009965 352 RQELEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYC 427 (521)
Q Consensus 352 ~~~l~~~~~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~ 427 (521)
+.++..+...|. +.||+|+||.||+|+.. +++.+|+|.+.... ....++..|+.++.++ +||||+++++++
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~ 82 (282)
T cd06636 8 LSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-----DEEEEIKLEINMLKKYSHHRNIATYYGAF 82 (282)
T ss_pred hhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-----HHHHHHHHHHHHHHHhcCCCcEEEEeeeh
Confidence 334444444454 78999999999999986 67889999874332 2235688899999998 799999999998
Q ss_pred ecCC----CCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCC
Q 009965 428 RESS----PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503 (521)
Q Consensus 428 ~~~~----~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~ 503 (521)
.... ....+++|||+++|+|.+++.......+++..+..++.|++.||+|||+. +++||||||+||++++++.
T Consensus 83 ~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~ 159 (282)
T cd06636 83 IKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAE 159 (282)
T ss_pred hcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCC
Confidence 5321 22689999999999999999754445688999999999999999999998 9999999999999999999
Q ss_pred eeeCCCchhhhcc
Q 009965 504 PKVSPLCLSFLLV 516 (521)
Q Consensus 504 ~kl~DfGla~~~~ 516 (521)
++|+|||+++...
T Consensus 160 ~~l~dfg~~~~~~ 172 (282)
T cd06636 160 VKLVDFGVSAQLD 172 (282)
T ss_pred EEEeeCcchhhhh
Confidence 9999999987653
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.1e-21 Score=188.72 Aligned_cols=144 Identities=18% Similarity=0.263 Sum_probs=124.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||+|+.. +|..||+|.+...... .....+.+|+.++++++||||+++++++.+.+ ..++||||+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 80 (284)
T cd07836 6 EKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE---GTPSTAIREISLMKELKHENIVRLHDVIHTEN--KLMLVFEYM 80 (284)
T ss_pred eeeccCCceEEEEEEECCCCeEEEEEEecccccc---cchHHHHHHHHHHHhhcCCCEeeeeeeEeeCC--cEEEEEecC
Confidence 78999999999999986 6889999988543221 22345778999999999999999999998876 789999999
Q ss_pred CCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGE-RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++ +|.+++.... ...+++..+.+++.|++.||+|||+. +++||||||+||++++++.++|+|||+++.+.
T Consensus 81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~ 151 (284)
T cd07836 81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFG 151 (284)
T ss_pred Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhc
Confidence 85 8998886433 34689999999999999999999998 99999999999999999999999999998653
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.8e-21 Score=185.15 Aligned_cols=143 Identities=22% Similarity=0.250 Sum_probs=126.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|... ++..+++|.+..... ...+.+.+|+.++++++||||+++++++.+.+ ..+++|||+
T Consensus 9 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~----~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~l~~e~~ 82 (262)
T cd06613 9 QRIGSGTYGDVYKARDIATGELVAIKVIKLEPG----DDFEIIQQEISMLKECRHPNIVAYFGSYLRRD--KLWIVMEYC 82 (262)
T ss_pred EEecCCCceEEEEeEecCCCCEEEEEEEEcCch----hhHHHHHHHHHHHHhCCCCChhceEEEEEeCC--EEEEEEeCC
Confidence 78999999999999886 578899998854322 13467899999999999999999999998776 799999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++... ...+++.++..++.|++.||+|||+. +++|+||||+||++++++.+||+|||++..+.
T Consensus 83 ~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~ 152 (262)
T cd06613 83 GGGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLT 152 (262)
T ss_pred CCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhh
Confidence 999999998643 23589999999999999999999998 99999999999999999999999999987654
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.1e-21 Score=188.87 Aligned_cols=145 Identities=21% Similarity=0.295 Sum_probs=127.3
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||+|+.. ++..||+|++..... .......+.+|+.++++++||||+++++++.... ..++||||+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~~v~e~~ 81 (286)
T cd07832 6 GRIGEGAHGIVFKAKDRETGETVALKKVALRRL--EGGIPNQALREIKALQACQHPYVVKLLDVFPHGS--GFVLVMEYM 81 (286)
T ss_pred eecccCCCcEEEEEEECCCCceEEEEEEEcccc--cchhhHHHHHHHHHHHhCCCCCCcceeeEEecCC--eeEEEeccc
Confidence 67999999999999986 688999999854332 1233467899999999999999999999998876 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
+++|.+++.... .++++.++..++.|+++||+|||+. +++|+||||+||++++++.++|+|||+++.+..
T Consensus 82 -~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~ 151 (286)
T cd07832 82 -PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSE 151 (286)
T ss_pred -CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccC
Confidence 999999986433 4689999999999999999999998 999999999999999999999999999887643
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.9e-21 Score=190.40 Aligned_cols=141 Identities=16% Similarity=0.234 Sum_probs=124.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||.|++|.||+|... +++.|++|.+..... ...+.+.+|+.+++.++|||++++++++...+ ..++|+||+
T Consensus 25 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 98 (296)
T cd06655 25 EKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ----PKKELIINEILVMKELKNPNIVNFLDSFLVGD--ELFVVMEYL 98 (296)
T ss_pred EEEecCCCeEEEEEEEcCCCcEEEEEEEecccC----chHHHHHHHHHHHHhcCCCceeeeeeeEecCc--eEEEEEEec
Confidence 67999999999999875 788999998854322 22456889999999999999999999998776 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++... .++|.++..++.+++.||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 99 ~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~ 166 (296)
T cd06655 99 AGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQIT 166 (296)
T ss_pred CCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhcc
Confidence 999999998532 489999999999999999999999 99999999999999999999999999987653
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.9e-21 Score=193.14 Aligned_cols=137 Identities=16% Similarity=0.066 Sum_probs=107.9
Q ss_pred chhCcCCCeeEEEEEeC--CCCEEEEEEeeeeccc-cchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEe
Q 009965 364 NIIGSSPDSLVYKGTMK--GGPEIAVISLCIKEEH-WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~--~~~~vavk~~~~~~~~-~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
+.||+|+||+||+|... +++.+|||++...... ......+.|.+|++++.+++|+|+++.+..+ + ..++|||
T Consensus 24 ~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---~--~~~LVmE 98 (365)
T PRK09188 24 AVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---G--KDGLVRG 98 (365)
T ss_pred cEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---C--CcEEEEE
Confidence 78999999999999875 5677899986422110 1223456799999999999999999643222 2 5799999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCC-CCCCeeecCCCCeeeCCCchhhhccc
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISEL-NSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dl-k~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
|+++++|... . .. . ...++.++++||+|||+. +|+|||| ||+|||++.++.+||+|||+|+.+..
T Consensus 99 ~~~G~~L~~~-~-~~----~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~ 164 (365)
T PRK09188 99 WTEGVPLHLA-R-PH----G---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRR 164 (365)
T ss_pred ccCCCCHHHh-C-cc----c---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECccceeccc
Confidence 9999999732 1 11 1 146788999999999998 9999999 99999999999999999999997653
|
|
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.4e-21 Score=187.93 Aligned_cols=142 Identities=17% Similarity=0.120 Sum_probs=124.4
Q ss_pred hCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCCC
Q 009965 366 IGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASN 444 (521)
Q Consensus 366 ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~~ 444 (521)
||+|+||.||+++.. +++.+++|.+..... ......+.+.+|++++.+++||||+++++.+.... ..++++||+++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~lv~e~~~~ 77 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADM-IRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKK--NLYLVMEYLPG 77 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhh-hhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCc--EEEEEEecCCC
Confidence 689999999999997 489999998854322 12234567899999999999999999999988766 78999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 445 GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 445 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
++|.+++.... .+++..+..++.|+++||+|||+. +++||||+|+||++++++.++|+|||++...
T Consensus 78 ~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~ 143 (265)
T cd05579 78 GDLASLLENVG--SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVG 143 (265)
T ss_pred CcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhc
Confidence 99999996433 589999999999999999999998 9999999999999999999999999998754
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.8e-21 Score=187.31 Aligned_cols=143 Identities=22% Similarity=0.260 Sum_probs=126.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
..||.|++|.||+|+.. ++..+|+|.+.... .......+.+|+.++++++|+|++++++++.+.. ..++|+||+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e~~ 81 (274)
T cd06609 7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE---AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGS--KLWIIMEYC 81 (274)
T ss_pred hhhcCCCCeEEEEEEECCCCeEEEEEEeeccc---cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECC--eEEEEEEee
Confidence 67999999999999986 68899999885432 1223456889999999999999999999998776 799999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++++|.++++.. .+++..+..++.|++.||.|||+. +++||||+|+||++++++.++|+|||+++.+..
T Consensus 82 ~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~ 150 (274)
T cd06609 82 GGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTS 150 (274)
T ss_pred CCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeecc
Confidence 999999999643 589999999999999999999998 999999999999999999999999999987654
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.4e-21 Score=186.89 Aligned_cols=142 Identities=20% Similarity=0.258 Sum_probs=124.6
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|... ++..+|+|.+..... ....+.+.+|+.++.+++||||+++++++.... ..++||||+
T Consensus 10 ~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 84 (277)
T cd06641 10 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA---EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT--KLWIIMEYL 84 (277)
T ss_pred eeEeecCCeEEEEEEECCCCcEEEEEEeccccc---hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCC--eEEEEEEeC
Confidence 67999999999999875 678999998743211 223457899999999999999999999998876 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.. ..+++.....++.+++.|+.|||+. +++|+||||+||+++.++.++|+|||+++.+.
T Consensus 85 ~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06641 85 GGGSALDLLEP---GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 152 (277)
T ss_pred CCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecc
Confidence 99999999853 2489999999999999999999998 99999999999999999999999999987543
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.86 E-value=6e-21 Score=186.42 Aligned_cols=149 Identities=23% Similarity=0.290 Sum_probs=122.6
Q ss_pred hchhCcCCCeeEEEEEeC----CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC----Cc
Q 009965 363 SNIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FT 434 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~----~~ 434 (521)
.+.||+|+||.||+|.+. ++..||+|.+..+.. .....+++.+|+.++++++||||+++++++..... ..
T Consensus 4 ~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 81 (273)
T cd05074 4 GRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIF--SSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPI 81 (273)
T ss_pred hhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccC--ChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccc
Confidence 367999999999999864 357899998854321 22334578899999999999999999999865321 12
Q ss_pred eEEEEecCCCCChhhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCc
Q 009965 435 RMLVFDYASNGTLYEHLHYG----ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLC 510 (521)
Q Consensus 435 ~~lv~ey~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfG 510 (521)
.++++||+++|+|.+++... ....+++....+++.|++.||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg 158 (273)
T cd05074 82 PMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADFG 158 (273)
T ss_pred eEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECccc
Confidence 47899999999999887421 123578999999999999999999998 99999999999999999999999999
Q ss_pred hhhhcc
Q 009965 511 LSFLLV 516 (521)
Q Consensus 511 la~~~~ 516 (521)
+++.+.
T Consensus 159 ~~~~~~ 164 (273)
T cd05074 159 LSKKIY 164 (273)
T ss_pred cccccc
Confidence 988653
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.4e-21 Score=186.88 Aligned_cols=142 Identities=19% Similarity=0.245 Sum_probs=125.2
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|... ++..||+|.+..... ......+.+|+.++++++||||+++++++.+.. ..++||||+
T Consensus 10 ~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 84 (277)
T cd06640 10 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA---EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGT--KLWIIMEYL 84 (277)
T ss_pred hhcccCCCeEEEEEEEccCCEEEEEEEEecccc---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--EEEEEEecC
Confidence 67999999999999986 578899998753321 233467899999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.. .++++.+...++.+++.||+|||+. +++|+||+|+||++++++.++|+|||+++.+.
T Consensus 85 ~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06640 85 GGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLT 152 (277)
T ss_pred CCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceecc
Confidence 99999999863 2488999999999999999999998 99999999999999999999999999997654
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.2e-21 Score=186.58 Aligned_cols=144 Identities=19% Similarity=0.237 Sum_probs=127.3
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||++... +++.+|+|.+..... ....+++.+|++++++++||||+++++++...+ ..++++||+
T Consensus 7 ~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv~e~~ 81 (265)
T cd06605 7 GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN---EAIQKQILRELDILHKCNSPYIVGFYGAFYNNG--DISICMEYM 81 (265)
T ss_pred HHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC---hHHHHHHHHHHHHHHHCCCCchhhhheeeecCC--EEEEEEEec
Confidence 68999999999999987 688999998854322 234567899999999999999999999998876 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++.... ..+++....+++.+++.||+|||+ . +++||||||+||++++++.++|+|||.+..+.
T Consensus 82 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~ 152 (265)
T cd06605 82 DGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLV 152 (265)
T ss_pred CCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhH
Confidence 9999999996432 468999999999999999999999 7 99999999999999999999999999987654
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.3e-21 Score=196.66 Aligned_cols=148 Identities=17% Similarity=0.186 Sum_probs=122.8
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCC----C
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----P 432 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~ 432 (521)
++|. +.||+|+||.||++... .++.||||++..... .....+.+.+|+.+++.++||||+++++++.... .
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ--NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred cceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCcccc--CchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 4444 78999999999999876 688999999854321 1233456889999999999999999999885432 1
Q ss_pred CceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchh
Q 009965 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512 (521)
Q Consensus 433 ~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla 512 (521)
...++||||+++ +|.+++.. .+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a 173 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 173 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCCCc
Confidence 147999999975 78877742 378999999999999999999998 9999999999999999999999999999
Q ss_pred hhccc
Q 009965 513 FLLVS 517 (521)
Q Consensus 513 ~~~~~ 517 (521)
+....
T Consensus 174 ~~~~~ 178 (364)
T cd07875 174 RTAGT 178 (364)
T ss_pred cccCC
Confidence 87654
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.3e-21 Score=184.76 Aligned_cols=146 Identities=19% Similarity=0.226 Sum_probs=126.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||++... ++..+|+|.+.... ......+.+.+|+.++++++|||++++++.+...+ ..++|+||+
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv~e~~ 81 (256)
T cd08220 6 RVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQ--MTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDK--ALMIVMEYA 81 (256)
T ss_pred EEecccCceEEEEEEEcCCCcEEEEEEEeccc--cccHHHHHHHHHHHHHhhCCCCchhheeeeEecCC--EEEEEEecC
Confidence 68999999999999886 67899999985432 22334567999999999999999999999988766 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCC-CCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED-FSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~-~~~kl~DfGla~~~~ 516 (521)
++++|.+++.......+++..+.+++.++++||+|||+. +++||||||+||+++++ ..+||+|||+++.+.
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~ 153 (256)
T cd08220 82 PGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILS 153 (256)
T ss_pred CCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecC
Confidence 999999999765555689999999999999999999998 99999999999999855 468999999988654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.1e-21 Score=186.76 Aligned_cols=144 Identities=19% Similarity=0.083 Sum_probs=117.8
Q ss_pred hhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHH---HHhccCCCCccceeeEEecCCCCceEEEEe
Q 009965 365 IIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVA---DLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 365 ~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~---~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
+||+|+||.||+++.. +++.||+|.+..+.... ......+..|.. .+....||||+++.+++.+.+ ..++|||
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~v~e 77 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM-KQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD--KLSFILD 77 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeecccccc-chhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCC--EEEEEEe
Confidence 4899999999999885 68899999886443211 111222344433 444558999999999998776 7899999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|+++|+|.+++... ..++|..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 78 ~~~g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~ 148 (278)
T cd05606 78 LMNGGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFS 148 (278)
T ss_pred cCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccC
Confidence 99999999988643 3589999999999999999999998 99999999999999999999999999987543
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.6e-21 Score=176.30 Aligned_cols=143 Identities=12% Similarity=0.119 Sum_probs=109.6
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchh----------------------hHHHHHHHHHHHhccCCCCcc
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGY----------------------LELYFQREVADLARINHENTG 421 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~----------------------~~~~~~~E~~~l~~l~H~niv 421 (521)
..||+|++|.||+|...+|+.||||++.......... .......|++.+.++.|+++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~ 82 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIP 82 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 5799999999999998889999999986542110000 012234599999999888875
Q ss_pred ceeeEEecCCCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHH-hcCCCCCeEecCCCCCCeeecC
Q 009965 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL-HTELGPPFTISELNSSAVYLTE 500 (521)
Q Consensus 422 ~l~g~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ivH~Dlk~~NiLld~ 500 (521)
....+... ..+|||||++++++....... .++++.+..+++.|++.+|+|+ |+. +|+||||||+|||++
T Consensus 83 ~p~~~~~~----~~~iVmE~i~g~~l~~~~~~~--~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~- 152 (190)
T cd05147 83 CPEPILLK----SHVLVMEFIGDDGWAAPRLKD--APLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH- 152 (190)
T ss_pred CCcEEEec----CCEEEEEEeCCCCCcchhhhc--CCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE-
Confidence 54433322 348999999988776553222 3588999999999999999999 677 999999999999998
Q ss_pred CCCeeeCCCchhhhcc
Q 009965 501 DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 501 ~~~~kl~DfGla~~~~ 516 (521)
++.++|+|||+|...+
T Consensus 153 ~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 153 DGKLYIIDVSQSVEHD 168 (190)
T ss_pred CCcEEEEEccccccCC
Confidence 4789999999998543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.6e-21 Score=198.31 Aligned_cols=136 Identities=16% Similarity=0.168 Sum_probs=118.1
Q ss_pred chhCcCCCeeEEEEEeC---CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEe
Q 009965 364 NIIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
..||+|+||.||++... .+..||+|.+... +.+.+|++++.+++|||||++++++.... ..++|||
T Consensus 98 ~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~---------~~~~~E~~il~~l~h~~iv~~~~~~~~~~--~~~lv~e 166 (392)
T PHA03207 98 SSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG---------KTPGREIDILKTISHRAIINLIHAYRWKS--TVCMVMP 166 (392)
T ss_pred EeecCCCCeEEEEEEEcCCccceeEEEEecccc---------ccHHHHHHHHHhcCCCCccceeeeEeeCC--EEEEEeh
Confidence 78999999999999764 3567888876321 23568999999999999999999998776 7899999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|+. ++|.+++.. ...++|.++..|+.|++.||+|||+. +|+||||||+|||+++++.++|+|||+++.+.
T Consensus 167 ~~~-~~l~~~l~~--~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~~ 236 (392)
T PHA03207 167 KYK-CDLFTYVDR--SGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLD 236 (392)
T ss_pred hcC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccccC
Confidence 996 589998842 34589999999999999999999998 99999999999999999999999999997654
|
|
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.7e-21 Score=188.59 Aligned_cols=151 Identities=23% Similarity=0.307 Sum_probs=125.6
Q ss_pred Hhhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCC----
Q 009965 359 CEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS---- 431 (521)
Q Consensus 359 ~~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~---- 431 (521)
.++|. +.||+|+||.||+|... +++.||+|.+...... ......+.+|+.++++++||||+++++++.+..
T Consensus 6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 6 VDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEK--EGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccc--cCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 34454 78999999999999986 6889999998543321 123346788999999999999999999986543
Q ss_pred ----CCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeC
Q 009965 432 ----PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVS 507 (521)
Q Consensus 432 ----~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~ 507 (521)
....++|+||+++ ++.+.+... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~kl~ 158 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIKLA 158 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEEeC
Confidence 1258999999986 777777543 33589999999999999999999998 99999999999999999999999
Q ss_pred CCchhhhcc
Q 009965 508 PLCLSFLLV 516 (521)
Q Consensus 508 DfGla~~~~ 516 (521)
|||+++.+.
T Consensus 159 dfg~~~~~~ 167 (302)
T cd07864 159 DFGLARLYN 167 (302)
T ss_pred ccccccccc
Confidence 999998754
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.9e-21 Score=189.16 Aligned_cols=145 Identities=21% Similarity=0.226 Sum_probs=124.2
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|.+...... .....+++.+|++++.+++||||+++.++|.+.+ ..++|+||+
T Consensus 21 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~--~~~lv~e~~ 97 (307)
T cd06607 21 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQ-SNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREH--TAWLVMEYC 97 (307)
T ss_pred eeecCCCCeEEEEEEEcCCCcEEEEEEEeccccC-cHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCC--eEEEEHHhh
Confidence 68999999999999886 6889999987533221 2233457899999999999999999999998877 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+ |++.+++... ...+++..+..++.|++.||.|||+. +++||||+|+||++++++.++|+|||+++...
T Consensus 98 ~-g~l~~~~~~~-~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~ 166 (307)
T cd06607 98 L-GSASDILEVH-KKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVS 166 (307)
T ss_pred C-CCHHHHHHHc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecC
Confidence 7 5887777532 23589999999999999999999998 99999999999999999999999999987654
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.85 E-value=5e-21 Score=188.10 Aligned_cols=145 Identities=19% Similarity=0.242 Sum_probs=126.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||+|... +|..||+|++...... ....+.+.+|++++++++|||++++++++.+.+ ..+++|||+
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~--~~~iv~e~~ 80 (283)
T cd07835 5 EKIGEGTYGVVYKARDKLTGEIVALKKIRLETED--EGVPSTAIREISLLKELNHPNIVRLLDVVHSEN--KLYLVFEFL 80 (283)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEeeccccc--ccchhHHHHHHHHHHhcCCCCccCHhheeccCC--eEEEEEecc
Confidence 67999999999999886 7899999988543211 223356889999999999999999999998776 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+ ++|.+++.......+++..+.+++.|+++||+|||+. +++||||+|+||++++++.++|+|||+++.+.
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~ 150 (283)
T cd07835 81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFG 150 (283)
T ss_pred C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccC
Confidence 5 6999998755434689999999999999999999998 99999999999999999999999999987653
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.2e-21 Score=184.21 Aligned_cols=146 Identities=20% Similarity=0.278 Sum_probs=127.3
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|... ++..+++|++...... ...+.+.+|+++++.++|+|++++++.+...+ ..++|+||+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~iv~e~~ 81 (267)
T cd06610 7 EVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQ---TSVDELRKEVQAMSQCNHPNVVKYYTSFVVGD--ELWLVMPYL 81 (267)
T ss_pred eeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcc---hHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCC--EEEEEEecc
Confidence 78999999999999876 6788999987533221 13467899999999999999999999998776 899999999
Q ss_pred CCCChhhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGER-CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++++|.++++.... ..+++.....++.|++.||+|||+. +++||||||+||++++++.++|+|||++..+..
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~ 154 (267)
T cd06610 82 SGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLAD 154 (267)
T ss_pred CCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhcc
Confidence 99999999974332 4689999999999999999999998 999999999999999999999999999876653
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.7e-22 Score=211.40 Aligned_cols=151 Identities=23% Similarity=0.300 Sum_probs=120.5
Q ss_pred HHHhhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCC--
Q 009965 357 VACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS-- 431 (521)
Q Consensus 357 ~~~~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-- 431 (521)
+-..+|+ .+||+|+||.|||++.+ ||+.+|||++..+. ....-..+.+|++.+++++|||||+++..+.+..
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~---s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~ 552 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA---SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAE 552 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch---HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCc
Confidence 3445666 68999999999999998 99999999997654 2233456889999999999999998876321100
Q ss_pred --------------------------------------------------------------------------------
Q 009965 432 -------------------------------------------------------------------------------- 431 (521)
Q Consensus 432 -------------------------------------------------------------------------------- 431 (521)
T Consensus 553 ~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~ 632 (1351)
T KOG1035|consen 553 LTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSN 632 (1351)
T ss_pred cccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccc
Confidence
Q ss_pred ----------------------------C-------CceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHH
Q 009965 432 ----------------------------P-------FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476 (521)
Q Consensus 432 ----------------------------~-------~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~ 476 (521)
+ ...||-||||+.-.++++++++.... .-....+++++|++||+
T Consensus 633 tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFreIlEGLa 711 (1351)
T KOG1035|consen 633 TSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFREILEGLA 711 (1351)
T ss_pred ccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHHHHHHHHH
Confidence 0 12467889999877777776544211 24456779999999999
Q ss_pred HHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 477 YLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 477 yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
|+|++ +||||||||.||++|++..+||+|||+|+.
T Consensus 712 YIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~ 746 (1351)
T KOG1035|consen 712 YIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATD 746 (1351)
T ss_pred HHHhC---ceeeccCCcceeEEcCCCCeeecccccchh
Confidence 99999 999999999999999999999999999987
|
|
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.4e-21 Score=184.89 Aligned_cols=144 Identities=14% Similarity=0.074 Sum_probs=118.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHH-hccCCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADL-ARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l-~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|... +++.||+|.+....... ......+..|..++ ...+|+|++++++++...+ ..++|+||
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~--~~~lv~e~ 78 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIA-KNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKD--YLYLVMEY 78 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhH-HHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCC--eEEEEEec
Confidence 35899999999999886 68899999875332111 11223345555444 4558999999999998776 79999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
+++|+|.+++.... .+++..+..++.|+++||.|||+. +++||||+|+||++++++.+||+|||+++..
T Consensus 79 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 147 (260)
T cd05611 79 LNGGDCASLIKTLG--GLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNG 147 (260)
T ss_pred cCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceec
Confidence 99999999996433 588999999999999999999998 9999999999999999999999999998754
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.4e-21 Score=184.16 Aligned_cols=143 Identities=20% Similarity=0.284 Sum_probs=127.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||+++.. +++.+++|++...... ...+.+.+|+..+.+++|+|++++++++...+ ..++|+||+
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~e~~ 81 (264)
T cd06623 7 KVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE---EFRKQLLRELKTLRSCESPYVVKCYGAFYKEG--EISIVLEYM 81 (264)
T ss_pred eeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch---HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCC--eEEEEEEec
Confidence 78999999999999997 5899999988543221 34567999999999999999999999998876 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++... ..+++..+.+++.|+++|++|||+ . +++||||+|+||++++++.++|+|||+++.+.
T Consensus 82 ~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~ 151 (264)
T cd06623 82 DGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLE 151 (264)
T ss_pred CCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecc
Confidence 999999999644 458999999999999999999999 8 99999999999999999999999999988654
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.6e-21 Score=186.18 Aligned_cols=142 Identities=20% Similarity=0.291 Sum_probs=124.3
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC---CCCccceeeEEecCCCCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN---HENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||.||+|... ++..+|+|.+..+.. ....+++.+|+.++++++ |||++++++++.... ..++||
T Consensus 7 ~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~--~~~lv~ 81 (277)
T cd06917 7 ELIGRGAYGAVYRGKHVPTGRVVALKIINLDTP---DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGP--RLWIIM 81 (277)
T ss_pred hheeccCCceEEEEEEcCCCcEEEEEEecCCCC---chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCC--EEEEEE
Confidence 67999999999999985 788999998753321 223456889999999996 999999999998766 789999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
||+++++|.+++... .+++.....++.+++.||.|||+. +++||||+|+||++++++.++|+|||++..+.
T Consensus 82 e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06917 82 EYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLN 152 (277)
T ss_pred ecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecC
Confidence 999999999998542 589999999999999999999998 99999999999999999999999999987654
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.7e-21 Score=191.85 Aligned_cols=144 Identities=20% Similarity=0.246 Sum_probs=122.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|... ++..+|+|++...... ......+.+|+.++.++ +||||+++++++...+....++||||
T Consensus 13 ~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~--~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~ 90 (337)
T cd07852 13 QKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRN--ATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEY 90 (337)
T ss_pred HhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCc--chhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEecc
Confidence 78999999999999986 6788999987432211 12234577899999999 99999999999876543368999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++ ++|.+++... .++|..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 91 ~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~ 158 (337)
T cd07852 91 ME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARSLS 158 (337)
T ss_pred cc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchhccc
Confidence 97 5999988643 589999999999999999999998 99999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.8e-21 Score=190.36 Aligned_cols=143 Identities=19% Similarity=0.125 Sum_probs=123.3
Q ss_pred chhCcC--CCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEe
Q 009965 364 NIIGSS--PDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~ig~G--~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
..||+| +||+||+++.. +|+.||+|.+...... ....+.+.+|+.+++.++||||+++++++.... ..++|+|
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~--~~~~v~e 79 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCT--EEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGS--WLWVISP 79 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCcceEeeeEecCC--ceEEEEe
Confidence 357777 89999999985 7899999987543222 233467899999999999999999999998876 7899999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhh
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSF 513 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~ 513 (521)
|+++|++.+++.......+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++||+.+.
T Consensus 80 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~ 149 (328)
T cd08226 80 FMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLY 149 (328)
T ss_pred cccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHh
Confidence 99999999998755444689999999999999999999998 99999999999999999999999998654
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.1e-20 Score=186.74 Aligned_cols=144 Identities=19% Similarity=0.255 Sum_probs=122.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||+|+.. +++.||+|.+..... .....+.+.+|++++++++||||+++++++.+.. ..++||||+
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 83 (294)
T PLN00009 8 EKIGEGTYGVVYKARDRVTNETIALKKIRLEQE--DEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK--RLYLVFEYL 83 (294)
T ss_pred EEecCCCCEEEEEEEecCCCcEEEEEehhhccc--cccchHHHHHHHHHHHhccCCCEeeEEEEEecCC--eEEEEEecc
Confidence 68999999999999986 688999998744321 1223456889999999999999999999998876 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC-CCCeeeCCCchhhhc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-DFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~-~~~~kl~DfGla~~~ 515 (521)
+ ++|.+++.......+++.....++.|++.||+|||+. +++||||||+||++++ ++.+||+|||+++..
T Consensus 84 ~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~ 153 (294)
T PLN00009 84 D-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAF 153 (294)
T ss_pred c-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEccccccccc
Confidence 6 5888888654444468888899999999999999998 9999999999999985 567999999999765
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.5e-22 Score=194.28 Aligned_cols=145 Identities=19% Similarity=0.277 Sum_probs=127.2
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|.||.||||... .++.||+|.+...... ....++.+|+.++..++++||.+++|.+..+. ..+++||||
T Consensus 19 ~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~---deIediqqei~~Ls~~~~~~it~yygsyl~g~--~LwiiMey~ 93 (467)
T KOG0201|consen 19 ELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAE---DEIEDIQQEISVLSQCDSPNITEYYGSYLKGT--KLWIIMEYC 93 (467)
T ss_pred hhccccccceeeeeeeccccceEEEEEechhhcc---hhhHHHHHHHHHHHhcCcchHHhhhhheeecc--cHHHHHHHh
Confidence 68999999999999886 6889999998654322 33457889999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~~ 518 (521)
.+|++.+.+... ..+++....-|.+++..|+.|||.+ +.+|||||+.|||+..+|.+|++|||++-.+...
T Consensus 94 ~gGsv~~lL~~~--~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~ 164 (467)
T KOG0201|consen 94 GGGSVLDLLKSG--NILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNT 164 (467)
T ss_pred cCcchhhhhccC--CCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeech
Confidence 999999999533 2357777888999999999999999 9999999999999999999999999998776543
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.6e-21 Score=175.06 Aligned_cols=144 Identities=12% Similarity=0.128 Sum_probs=112.6
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccc----------------------hhhHHHHHHHHHHHhccCCCCcc
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWT----------------------GYLELYFQREVADLARINHENTG 421 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~----------------------~~~~~~~~~E~~~l~~l~H~niv 421 (521)
..||+|++|.||+|+..+|+.||||.+........ ......+..|.+.+.+++|+++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 82 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVP 82 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 46999999999999988899999999865421100 00122346899999999999986
Q ss_pred ceeeEEecCCCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeEecCCCCCCeeecC
Q 009965 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTE 500 (521)
Q Consensus 422 ~l~g~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlk~~NiLld~ 500 (521)
....+... ..++||||++++++....... ..++..+..+++.+++.++.|+|+ . +|+||||||+||+++
T Consensus 83 ~p~~~~~~----~~~lVmE~~~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~- 152 (190)
T cd05145 83 VPEPILLK----KNVLVMEFIGDDGSPAPRLKD--VPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH- 152 (190)
T ss_pred CceEEEec----CCEEEEEEecCCCchhhhhhh--ccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE-
Confidence 55554433 248999999987554432212 247788899999999999999999 8 999999999999999
Q ss_pred CCCeeeCCCchhhhccc
Q 009965 501 DFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 501 ~~~~kl~DfGla~~~~~ 517 (521)
++.++|+|||+++.+..
T Consensus 153 ~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 153 DGKPYIIDVSQAVELDH 169 (190)
T ss_pred CCCEEEEEcccceecCC
Confidence 78999999999988754
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=9e-21 Score=187.52 Aligned_cols=141 Identities=16% Similarity=0.226 Sum_probs=123.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||++... ++..+++|.+..... ...+.+.+|+.++.+++||||+++++++...+ ..++|+||+
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~----~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~--~~~lv~e~~ 98 (293)
T cd06647 25 EKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ----PKKELIINEILVMRENKHPNIVNYLDSYLVGD--ELWVVMEYL 98 (293)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEeccccc----hHHHHHHHHHHHHhhcCCCCeeehhheeeeCC--cEEEEEecC
Confidence 78999999999999875 678899998743221 22456889999999999999999999998876 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++... .+++..+..++.+++.||+|||+. +++||||||+||++++++.++|+|||++..+.
T Consensus 99 ~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~ 166 (293)
T cd06647 99 AGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 166 (293)
T ss_pred CCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceeccc
Confidence 999999998632 378999999999999999999999 99999999999999999999999999876543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.1e-21 Score=188.89 Aligned_cols=146 Identities=22% Similarity=0.265 Sum_probs=123.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|... +|..||+|.+...... ......+.+|+.++.+++|+||+++++++.+......++||||+
T Consensus 13 ~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~ 90 (309)
T cd07845 13 NRIGEGTYGIVYRARDTTSGEIVALKKVRMDNER--DGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYC 90 (309)
T ss_pred eeeeecCCEEEEEEEECCCCcEEEEEEEEeccCC--CCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecC
Confidence 78999999999999986 6899999998543321 12223467899999999999999999999765433689999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++ +|.+++... ...+++.++..++.|+++||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 91 ~~-~l~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~ 159 (309)
T cd07845 91 EQ-DLASLLDNM-PTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTYG 159 (309)
T ss_pred CC-CHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeecC
Confidence 75 898888643 24689999999999999999999999 99999999999999999999999999988654
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.4e-21 Score=190.93 Aligned_cols=148 Identities=15% Similarity=0.139 Sum_probs=127.8
Q ss_pred hchhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEec
Q 009965 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
++.||+|.|..|-.+++- +|..||||++.+...+ ......+.+|++.|+-++|||||+|+.+..... ..|||+|.
T Consensus 23 ekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD--~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQT--KlyLiLEL 98 (864)
T KOG4717|consen 23 EKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLD--TLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQT--KLYLILEL 98 (864)
T ss_pred hhhhcCCceehhhhhhhhcccceeEEEEecccccc--hhhhhHHHHHHHHHHHhcCcCeeeeeehhcccc--eEEEEEEe
Confidence 356999999999999875 8899999999655432 344567889999999999999999999987766 79999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee-cCCCCeeeCCCchhhhcccc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL-TEDFSPKVSPLCLSFLLVSS 518 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLl-d~~~~~kl~DfGla~~~~~~ 518 (521)
-.+|+|++|+.... ..+.+....+++.||..|+.|+|+. .+|||||||+||.+ ..-|-+|+.|||++..+.++
T Consensus 99 GD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG 172 (864)
T KOG4717|consen 99 GDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG 172 (864)
T ss_pred cCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCCc
Confidence 99999999997443 3589999999999999999999998 99999999999876 45688999999999877653
|
|
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.85 E-value=7e-21 Score=185.80 Aligned_cols=150 Identities=22% Similarity=0.251 Sum_probs=126.6
Q ss_pred Hhhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCC---
Q 009965 359 CEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESS--- 431 (521)
Q Consensus 359 ~~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~--- 431 (521)
+++|. +.||+|++|.||+|... +++.+++|.+..... ..+++.+|+.++.++ +|+||+++++++....
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-----EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPG 79 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-----hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCC
Confidence 34454 78999999999999986 678899998743321 235789999999999 7999999999997643
Q ss_pred -CCceEEEEecCCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCC
Q 009965 432 -PFTRMLVFDYASNGTLYEHLHYGE--RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSP 508 (521)
Q Consensus 432 -~~~~~lv~ey~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~D 508 (521)
....++||||+++++|.+++.... ...+++..+..++.|+++||+|||+. +++|+||+|+||++++++.+||+|
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d 156 (275)
T cd06608 80 NDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVD 156 (275)
T ss_pred cceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECC
Confidence 225799999999999999986432 35689999999999999999999998 999999999999999999999999
Q ss_pred Cchhhhcc
Q 009965 509 LCLSFLLV 516 (521)
Q Consensus 509 fGla~~~~ 516 (521)
||++....
T Consensus 157 ~~~~~~~~ 164 (275)
T cd06608 157 FGVSAQLD 164 (275)
T ss_pred Cccceecc
Confidence 99987543
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.85 E-value=5e-21 Score=188.42 Aligned_cols=145 Identities=18% Similarity=0.196 Sum_probs=124.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||+|..+ ++..||+|.+..... .....+.+.+|++++++++|+||+++++++...+ ..++||||+
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~iv~e~~ 82 (288)
T cd07833 7 GVVGEGAYGVVLKCRNKATGEIVAIKKFKESED--DEDVKKTALREVKVLRQLRHENIVNLKEAFRRKG--RLYLVFEYV 82 (288)
T ss_pred EEecccCCeeEEEEEeCCCCcEEEEehhhhhcc--cccchhHHHHHHHHHHhcCCCCeeehhheEEECC--EEEEEEecC
Confidence 68999999999999987 578999998754321 1233467899999999999999999999998866 799999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
+++.+..+.... ..+++.++..++.++++||+|||+. +++||||+|+||++++++.+||+|||+++.+..
T Consensus 83 ~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~ 152 (288)
T cd07833 83 ERTLLELLEASP--GGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRA 152 (288)
T ss_pred CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCC
Confidence 987776665432 3489999999999999999999998 999999999999999999999999999887553
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.3e-21 Score=175.49 Aligned_cols=147 Identities=20% Similarity=0.232 Sum_probs=126.5
Q ss_pred chhCcCCCeeEEEEEe-CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCC---CCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTM-KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS---PFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~-~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~---~~~~~lv~ 439 (521)
+.+|+|+|+-||.++. .+++.+|+|++.... .+..+..++|++..++++||||+++++++..+. ..+.||++
T Consensus 27 ~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~----~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~ 102 (302)
T KOG2345|consen 27 RLLGEGGFSFVDLVKGLSTGHLYALKKILCHS----QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLL 102 (302)
T ss_pred eeecCCCceeeeeecccCcccchhhheeeccc----hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEe
Confidence 7899999999999985 478899999985543 234567899999999999999999999985432 23689999
Q ss_pred ecCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 440 DYASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 440 ey~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
.|...|+|.+.+... ++..+++.+.+.|+.+|++||.+||+. .|+.+||||||.|||+.+++.+++.|||-++..
T Consensus 103 Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a 179 (302)
T KOG2345|consen 103 PYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSATQA 179 (302)
T ss_pred ehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCcccc
Confidence 999999999998743 334689999999999999999999996 567999999999999999999999999988754
|
|
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.85 E-value=2e-20 Score=187.19 Aligned_cols=145 Identities=21% Similarity=0.234 Sum_probs=124.3
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. ++..+|+|.+...... ......++.+|++++++++|||++++++++.+.. ..++||||+
T Consensus 31 ~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 107 (317)
T cd06635 31 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQ-SNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREH--TAWLVMEYC 107 (317)
T ss_pred heeccCCCeEEEEEEEcCCCcEEEEEEEecCCCC-chHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC--eEEEEEeCC
Confidence 67999999999999986 6789999987543222 2233457889999999999999999999998877 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+ |++.+++... ..+++|.++..++.+++.||.|||+. +|+||||+|+||++++++.+||+|||+++...
T Consensus 108 ~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~ 176 (317)
T cd06635 108 L-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIAS 176 (317)
T ss_pred C-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccC
Confidence 7 5888877533 34589999999999999999999998 99999999999999999999999999987654
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.4e-21 Score=187.65 Aligned_cols=146 Identities=16% Similarity=0.165 Sum_probs=121.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCCccceeeEEecCCC---CceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSP---FTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~---~~~~lv 438 (521)
+.||+|+||.||+|... +++.||+|.+...... ......+.+|+.++.+++ ||||+++++++...+. ...++|
T Consensus 7 ~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~--~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv 84 (295)
T cd07837 7 EKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDE--EGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLV 84 (295)
T ss_pred eEecccCCeEEEEEEECCCCcEEEEEeehhhccc--cCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEE
Confidence 68999999999999986 6889999987443211 122356888999999995 6999999999876541 127999
Q ss_pred EecCCCCChhhhhccCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC-CCCeeeCCCchhhh
Q 009965 439 FDYASNGTLYEHLHYGE---RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-DFSPKVSPLCLSFL 514 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~-~~~~kl~DfGla~~ 514 (521)
|||+++ +|.+++.... ...+++..+..++.||++||+|||+. +++||||||+||+++. ++.+||+|||+++.
T Consensus 85 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~ 160 (295)
T cd07837 85 FEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLGLGRA 160 (295)
T ss_pred eeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeeccccee
Confidence 999985 8998886432 24689999999999999999999998 9999999999999998 89999999999875
Q ss_pred c
Q 009965 515 L 515 (521)
Q Consensus 515 ~ 515 (521)
+
T Consensus 161 ~ 161 (295)
T cd07837 161 F 161 (295)
T ss_pred c
Confidence 4
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.5e-20 Score=185.84 Aligned_cols=140 Identities=18% Similarity=0.251 Sum_probs=123.5
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
.+||+|+||.||++... ++..||+|++.... ......+.+|+.++++++|+|++++++++...+ ..++||||+
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 99 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD--ELWVVMEFL 99 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccc----hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCC--EEEEEEecC
Confidence 57999999999999886 78899999874322 223456899999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
++++|.+++... .+++.....++.|++.||+|||+. +++||||||+||++++++.++|+|||++..+
T Consensus 100 ~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~ 166 (292)
T cd06657 100 EGGALTDIVTHT---RMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQV 166 (292)
T ss_pred CCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceec
Confidence 999999987532 479999999999999999999998 9999999999999999999999999987654
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.5e-20 Score=183.62 Aligned_cols=140 Identities=17% Similarity=0.253 Sum_probs=123.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||++... +++.+++|++.... ....+.+.+|+.++..++||||+++++++...+ ..++++||+
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~----~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~--~~~~v~e~~ 98 (285)
T cd06648 25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK----QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGD--ELWVVMEFL 98 (285)
T ss_pred eEeccCCCeEEEEEEECCCCCEEEEEEEeccc----hhHHHHHHHHHHHHHHcCCCChheEEEEEEcCC--eEEEEEecc
Confidence 68999999999999875 68899999874322 123456889999999999999999999998776 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
++++|.+++.. ..+++..+..++.+++.||+|||+. +++||||+|+||++++++.++|+|||+++..
T Consensus 99 ~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~ 165 (285)
T cd06648 99 EGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQV 165 (285)
T ss_pred CCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhh
Confidence 99999999864 2489999999999999999999998 9999999999999999999999999988754
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.5e-20 Score=183.46 Aligned_cols=142 Identities=19% Similarity=0.297 Sum_probs=126.5
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.+|+|++|.||+|..+ ++..+++|.+..... ..+.+.+|++++..++|+|++++++++.... ..++|+||+
T Consensus 25 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~e~~ 97 (286)
T cd06614 25 EKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-----NKELIINEILIMKDCKHPNIVDYYDSYLVGD--ELWVVMEYM 97 (286)
T ss_pred HhccCCCCeEEEEEEEccCCcEEEEEEEecCch-----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECC--EEEEEEecc
Confidence 68999999999999997 688999998854322 3456889999999999999999999998876 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++.... ..+++..+..++.+++.||+|||+. +++|+||+|+||+++.++.++|+|||++....
T Consensus 98 ~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 167 (286)
T cd06614 98 DGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLT 167 (286)
T ss_pred CCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhc
Confidence 9999999997543 3699999999999999999999998 99999999999999999999999999877543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.1e-20 Score=184.15 Aligned_cols=145 Identities=17% Similarity=0.128 Sum_probs=120.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+++.. +++.+|+|.+...... .....+.+|+.++.++. ||||+++++++.... ..+++|||
T Consensus 10 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~--~~~~~~e~ 84 (288)
T cd06616 10 GEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE---KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREG--DCWICMEL 84 (288)
T ss_pred HHhCCCCceEEEEEEECCCCCEEEEEEehhccCh---HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCC--cEEEEEec
Confidence 68999999999999986 6889999988543221 34567899999999996 999999999998766 78999999
Q ss_pred CCCCChhhhh---ccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 442 ASNGTLYEHL---HYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~gsL~~~l---~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++. ++.++. .......+++....+++.++++||+|||+.+ +++||||||+||++++++.+||+|||+++.+.
T Consensus 85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 159 (288)
T cd06616 85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLV 159 (288)
T ss_pred ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence 874 555443 2223356899999999999999999999742 89999999999999999999999999998654
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.3e-20 Score=179.83 Aligned_cols=145 Identities=21% Similarity=0.290 Sum_probs=127.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||+++.. ++..+++|.+...... ....+.+.+|++++.+++|||++++++++.+.+ ..++++||+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~v~e~~ 81 (254)
T cd06627 6 DLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK--EEALKSIMQEIDLLKNLKHPNIVKYIGSIETSD--SLYIILEYA 81 (254)
T ss_pred eEEcccCCeEEEEEEEcCCCcEEEEEEecccccC--HHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCC--EEEEEEecC
Confidence 68999999999999886 6789999998544321 234567999999999999999999999998776 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++++|.+++... ..+++..+..++.+++.||.|||+. +++||||||+||++++++.++|+|||+++....
T Consensus 82 ~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 151 (254)
T cd06627 82 ENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLND 151 (254)
T ss_pred CCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCC
Confidence 999999998644 4589999999999999999999998 999999999999999999999999999886643
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1e-20 Score=186.45 Aligned_cols=146 Identities=15% Similarity=0.106 Sum_probs=124.0
Q ss_pred chhCcCCCeeEEEEEeC----CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|++|.||+++.. ++..+|||.+............+.+.+|+.++.++ +||||+++.+.+.... ..++|
T Consensus 6 ~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~--~~~lv 83 (288)
T cd05583 6 RVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDT--KLHLI 83 (288)
T ss_pred EEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCC--EEEEE
Confidence 68999999999999753 46789999885332211223345788999999999 5999999999987766 78999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|||+++|+|.+++... ..+++.....++.|+++||+|||+. +++||||||+||++++++.++|+|||+++.+.
T Consensus 84 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 156 (288)
T cd05583 84 LDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (288)
T ss_pred EecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECccccccc
Confidence 9999999999998643 3588999999999999999999998 99999999999999999999999999987643
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.84 E-value=2e-20 Score=182.34 Aligned_cols=148 Identities=19% Similarity=0.206 Sum_probs=123.9
Q ss_pred chhCcCCCeeEEEEEeCC--CCEEEEEEeeeeccc------cchhhHHHHHHHHHHHhc-cCCCCccceeeEEecCCCCc
Q 009965 364 NIIGSSPDSLVYKGTMKG--GPEIAVISLCIKEEH------WTGYLELYFQREVADLAR-INHENTGKLLGYCRESSPFT 434 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~--~~~vavk~~~~~~~~------~~~~~~~~~~~E~~~l~~-l~H~niv~l~g~~~~~~~~~ 434 (521)
+.||+|+||.||+|.... +..+|+|.+...... .......++.+|+.++.+ ++||||+++++++...+ .
T Consensus 6 ~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~--~ 83 (269)
T cd08528 6 EHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEND--R 83 (269)
T ss_pred hhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCC--e
Confidence 689999999999999865 678999987543211 122234567789988875 79999999999998877 8
Q ss_pred eEEEEecCCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeEecCCCCCCeeecCCCCeeeCCCch
Q 009965 435 RMLVFDYASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTEDFSPKVSPLCL 511 (521)
Q Consensus 435 ~~lv~ey~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGl 511 (521)
.++||||+++++|.+++.. .....+++..+.+++.|++.||.|||+ . +++||||||+||++++++.+||+|||+
T Consensus 84 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 84 LYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred EEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCHHHEEECCCCcEEEecccc
Confidence 9999999999999998753 223458999999999999999999996 4 799999999999999999999999999
Q ss_pred hhhcc
Q 009965 512 SFLLV 516 (521)
Q Consensus 512 a~~~~ 516 (521)
+....
T Consensus 161 ~~~~~ 165 (269)
T cd08528 161 AKQKQ 165 (269)
T ss_pred eeecc
Confidence 87654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.8e-20 Score=186.46 Aligned_cols=146 Identities=21% Similarity=0.300 Sum_probs=122.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC------CceE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP------FTRM 436 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~------~~~~ 436 (521)
..||+|+||.||+|+.. +++.||+|.+...... ......+.+|+.++++++||||++++++|..... ...+
T Consensus 18 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~ 95 (310)
T cd07865 18 AKIGQGTFGEVFKARHKKTKQIVALKKVLMENEK--EGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFY 95 (310)
T ss_pred EEeecCCCEEEEEEEECCCCcEEEEEEEeccCCc--CCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEE
Confidence 78999999999999986 6889999988543221 1223456789999999999999999999875431 1459
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+||||+++ +|.+++.... ..+++.+...++.|++.||+|||+. +++|+||||+||++++++.+||+|||+++.+.
T Consensus 96 lv~e~~~~-~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 170 (310)
T cd07865 96 LVFEFCEH-DLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADFGLARAFS 170 (310)
T ss_pred EEEcCCCc-CHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcCCCccccc
Confidence 99999975 8888885432 3589999999999999999999998 99999999999999999999999999997653
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1e-20 Score=197.30 Aligned_cols=155 Identities=15% Similarity=0.178 Sum_probs=117.9
Q ss_pred Hhhhh--chhCcCCCeeEEEEEe-----------------CCCCEEEEEEeeeeccccc----------hhhHHHHHHHH
Q 009965 359 CEDFS--NIIGSSPDSLVYKGTM-----------------KGGPEIAVISLCIKEEHWT----------GYLELYFQREV 409 (521)
Q Consensus 359 ~~~~~--~~ig~G~~g~Vy~~~~-----------------~~~~~vavk~~~~~~~~~~----------~~~~~~~~~E~ 409 (521)
.++|. ++||+|+||.||+|.. .+++.||||++........ ....+.+..|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 45565 8999999999999964 2356799999854321100 00122345577
Q ss_pred HHHhccCCCCc-----cceeeEEecCC------CCceEEEEecCCCCChhhhhccCC----------------------C
Q 009965 410 ADLARINHENT-----GKLLGYCRESS------PFTRMLVFDYASNGTLYEHLHYGE----------------------R 456 (521)
Q Consensus 410 ~~l~~l~H~ni-----v~l~g~~~~~~------~~~~~lv~ey~~~gsL~~~l~~~~----------------------~ 456 (521)
.++.+++|.++ +++++||.... ....+|||||+++|+|.++++... .
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 78888877655 77888885421 125799999999999999986321 1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 457 CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 457 ~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
..++|..+..|+.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~ 360 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMC 360 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccc
Confidence 2357888999999999999999998 99999999999999999999999999997653
|
|
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.1e-21 Score=185.58 Aligned_cols=146 Identities=23% Similarity=0.239 Sum_probs=127.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|++|.||+++.. ++..+|+|.+.... .......+.+.+|..++.+++ ||||+++++++.+.+ ..++||||
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~--~~~lv~e~ 83 (280)
T cd05581 7 KIIGEGSFSTVVLAKEKETNKEYAIKILDKRQ-LIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEE--NLYFVLEY 83 (280)
T ss_pred eeecCCCceEEEEEEEcCCCCEEEEEEechHh-ccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCc--eEEEEEcC
Confidence 68999999999999986 78999999874422 112233467889999999998 999999999998776 78999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
+++++|.+++.... .+++..+..|+.|++.||+|||+. +++|+||||+||++++++.++++|||++.....
T Consensus 84 ~~~~~L~~~l~~~~--~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~ 154 (280)
T cd05581 84 APNGELLQYIRKYG--SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLDP 154 (280)
T ss_pred CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence 99999999996443 599999999999999999999998 999999999999999999999999999886543
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.9e-20 Score=179.36 Aligned_cols=147 Identities=20% Similarity=0.241 Sum_probs=128.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||++... ++..+++|++..... .....+++.+|+++++.++|||++++.+.+.... ..++|+||+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~--~~~lv~e~~ 81 (258)
T cd08215 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM--SEKEREDALNEVKILKKLNHPNIIKYYESFEEKG--KLCIVMEYA 81 (258)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEeecccC--ChHHHHHHHHHHHHHHhcCCCChhheEEEEecCC--EEEEEEEec
Confidence 67999999999999986 688999999854332 1234567889999999999999999999998776 889999999
Q ss_pred CCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGE--RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++++|.+++.... ...+++.++..++.++++||+|||+. +++|+||+|+||++++++.++|+|||++.....
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~ 155 (258)
T cd08215 82 DGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSS 155 (258)
T ss_pred CCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeeccc
Confidence 9999999997532 35699999999999999999999998 999999999999999999999999999886543
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.9e-20 Score=186.97 Aligned_cols=148 Identities=24% Similarity=0.317 Sum_probs=123.2
Q ss_pred chhCcCCCeeEEEEEeCC---CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEe
Q 009965 364 NIIGSSPDSLVYKGTMKG---GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~---~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
+.||+|++|.||+|+... +..||+|.+...... .....+.+.+|+.++.+++||||+++++++.+......++|||
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 84 (316)
T cd07842 6 GCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQ-YTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFD 84 (316)
T ss_pred EEeccCCcEEEEEEEecCCCCCCeEEEEEecccccc-ccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEe
Confidence 679999999999999854 789999998653211 1222356788999999999999999999998874347999999
Q ss_pred cCCCCChhhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC----CCCeeeCCCchhh
Q 009965 441 YASNGTLYEHLHYG---ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE----DFSPKVSPLCLSF 513 (521)
Q Consensus 441 y~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~----~~~~kl~DfGla~ 513 (521)
|+++ ++.+++... ....+++.....|+.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++
T Consensus 85 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~ 160 (316)
T cd07842 85 YAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDLGLAR 160 (316)
T ss_pred CCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCCcccc
Confidence 9985 777776422 123688999999999999999999998 9999999999999999 9999999999988
Q ss_pred hcc
Q 009965 514 LLV 516 (521)
Q Consensus 514 ~~~ 516 (521)
.+.
T Consensus 161 ~~~ 163 (316)
T cd07842 161 LFN 163 (316)
T ss_pred ccC
Confidence 754
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.9e-20 Score=184.01 Aligned_cols=147 Identities=20% Similarity=0.252 Sum_probs=125.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||+|+.. ++..+|+|++.... ......+.+.+|+.++.+++|||++++++++........++|+||+
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~ 82 (287)
T cd07840 5 AQIGEGTYGQVYKARNKKTGELVALKKIRMEN--EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYM 82 (287)
T ss_pred EEeccCCCeEEEEEEECCCCeEEEEEEEeccc--ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEeccc
Confidence 67999999999999987 58899999986543 1122345688999999999999999999999876212799999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++ +|.+++.... ..+++..+..++.++++||+|||+. +++|+||||+||++++++.+||+|||+++.+..
T Consensus 83 ~~-~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~ 152 (287)
T cd07840 83 DH-DLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTK 152 (287)
T ss_pred cc-cHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccC
Confidence 85 8999886432 3689999999999999999999998 999999999999999999999999999886654
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-20 Score=185.34 Aligned_cols=146 Identities=25% Similarity=0.290 Sum_probs=125.4
Q ss_pred hchhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCCccceeeEEecCCCCceEEEEe
Q 009965 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
.+.||+|++|.||+|+.. +++.|++|++..+... .......+|+..+.+++ |||++++++++.+.+ ..++|||
T Consensus 4 ~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~--~~~lv~e 78 (283)
T cd07830 4 IKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS---WEECMNLREVKSLRKLNEHPNIVKLKEVFREND--ELYFVFE 78 (283)
T ss_pred heeeccCCceEEEEEEECCCCcEEEEEEehhhccc---hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCC--cEEEEEe
Confidence 367999999999999987 5788999987543221 12234567999999998 999999999998866 8999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
|+ +|+|.+++.......++|.++..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||+++....
T Consensus 79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~ 151 (283)
T cd07830 79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRS 151 (283)
T ss_pred cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccC
Confidence 99 78999998755445689999999999999999999998 999999999999999999999999999986643
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-22 Score=184.22 Aligned_cols=147 Identities=24% Similarity=0.370 Sum_probs=122.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCC------CCceE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS------PFTRM 436 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------~~~~~ 436 (521)
.+||+|.||.||+++.. +|+.||+|++-...+ .........+|+++|..++|+|++.++..|.... ....|
T Consensus 23 ~kigqGtfgeVFkAr~~n~~kkvalkkvlmene--KeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~y 100 (376)
T KOG0669|consen 23 AKIGQGTFGEVFKARSKNTGKKVALKKVLMENE--KEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFY 100 (376)
T ss_pred HhcCCchHHHHHHHhhcCccchhHHHHHHHhcc--ccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceee
Confidence 58999999999999987 577889887633221 1122345688999999999999999999986432 11479
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+|++++++ +|...|.. ....++..++.+++.++..||.|+|.. .|+|||+||+|+||+.++..||+|||+||.+.
T Consensus 101 lVf~~ceh-DLaGlLsn-~~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFGlar~fs 175 (376)
T KOG0669|consen 101 LVFDFCEH-DLAGLLSN-RKVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFGLARAFS 175 (376)
T ss_pred eeHHHhhh-hHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeecccccccee
Confidence 99999998 99998853 334589999999999999999999999 99999999999999999999999999998765
Q ss_pred c
Q 009965 517 S 517 (521)
Q Consensus 517 ~ 517 (521)
.
T Consensus 176 ~ 176 (376)
T KOG0669|consen 176 T 176 (376)
T ss_pred c
Confidence 3
|
|
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-20 Score=190.27 Aligned_cols=145 Identities=19% Similarity=0.226 Sum_probs=122.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCC--CCceEEEEe
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS--PFTRMLVFD 440 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~--~~~~~lv~e 440 (521)
+.||+|++|.||+|+.. ++..||+|++...... ....+.+.+|+.++.+++||||+++.+++.... ....++|+|
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e 88 (334)
T cd07855 11 ENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDV--PTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMD 88 (334)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEecccccc--ccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEe
Confidence 68999999999999886 6889999998543221 123456788999999999999999999876432 225799999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|++ |+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 89 ~~~-~~l~~~~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 158 (334)
T cd07855 89 LME-SDLHHIIHSDQ--PLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMARGLS 158 (334)
T ss_pred hhh-hhHHHHhccCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccceeec
Confidence 996 59999986433 489999999999999999999998 99999999999999999999999999987654
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.8e-21 Score=185.76 Aligned_cols=151 Identities=21% Similarity=0.223 Sum_probs=126.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchh----hHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGY----LELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~----~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+++|+|+|+.|||+..- ..+.||||+-... +.|... ..+...+|.+|...+.||.||++++|+.-+. +..+-|
T Consensus 469 hLLGrGGFSEVyKAFDl~EqRYvAvKIHqlN-K~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt-dsFCTV 546 (775)
T KOG1151|consen 469 HLLGRGGFSEVYKAFDLTEQRYVAVKIHQLN-KNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT-DSFCTV 546 (775)
T ss_pred HHhccccHHHHHHhcccchhheeeEeeehhc-cchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc-ccceee
Confidence 68999999999999765 5788999875322 344322 3456778999999999999999999996443 268999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeec---CCCCeeeCCCchhhhc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT---EDFSPKVSPLCLSFLL 515 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld---~~~~~kl~DfGla~~~ 515 (521)
+||+++.+|+-||+... .+++.+...|+.||+.||.||.+. .|+|||-||||.|||+- .-|++||.||||+++|
T Consensus 547 LEYceGNDLDFYLKQhk--lmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIM 623 (775)
T KOG1151|consen 547 LEYCEGNDLDFYLKQHK--LMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIM 623 (775)
T ss_pred eeecCCCchhHHHHhhh--hhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecchhhhc
Confidence 99999999999996443 489999999999999999999985 88999999999999994 4578999999999999
Q ss_pred cccc
Q 009965 516 VSSI 519 (521)
Q Consensus 516 ~~~~ 519 (521)
++..
T Consensus 624 dddS 627 (775)
T KOG1151|consen 624 DDDS 627 (775)
T ss_pred cCCc
Confidence 8754
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=2e-21 Score=180.11 Aligned_cols=141 Identities=15% Similarity=0.168 Sum_probs=121.0
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCC--CCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESS--PFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~--~~~~~lv~ 439 (521)
++||-|-.|.|..+..+ +++.+|+|.+.. ....++|++..-.. .|||||+++++|.+.- .....+||
T Consensus 68 qvLG~GinGkV~~C~~k~T~ekfALKvL~D---------s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVm 138 (400)
T KOG0604|consen 68 QVLGAGINGKVVQCVHKRTQEKFALKVLLD---------SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVM 138 (400)
T ss_pred hhhccccCCceEEEEeccchhhhHHHHHhc---------CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeee
Confidence 79999999999999886 788899998732 12356788875555 7999999999997532 12567899
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC---CCCeeeCCCchhhhcc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~---~~~~kl~DfGla~~~~ 516 (521)
|.|++|.|.+.+..++...+++.+..+|+.+|+.|+.|||+. .|.||||||+|+|... +-..||+|||+|+.-.
T Consensus 139 E~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~ 215 (400)
T KOG0604|consen 139 ECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQ 215 (400)
T ss_pred ecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEecccccccccC
Confidence 999999999999888888899999999999999999999999 9999999999999964 5578999999999765
|
|
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.9e-20 Score=178.44 Aligned_cols=147 Identities=21% Similarity=0.236 Sum_probs=128.3
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||+|... ++..|++|.+...... ....+.+.+|+.++++++||||+++++.+........++|+||+
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~ 83 (260)
T cd06606 6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS--EEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYV 83 (260)
T ss_pred eEeeecCceEEEEEEECCCCcEEEEEEeeccccc--hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEec
Confidence 67999999999999987 6889999988543321 23456789999999999999999999999877212789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++++|.+++.... .++|..+..++.++++||+|||+. +++|+||+|+||++++++.++|+|||.+.....
T Consensus 84 ~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 153 (260)
T cd06606 84 SGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGD 153 (260)
T ss_pred CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEeccc
Confidence 9999999996443 689999999999999999999998 999999999999999999999999999887654
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.6e-21 Score=193.21 Aligned_cols=142 Identities=20% Similarity=0.197 Sum_probs=123.1
Q ss_pred hhCcCCCeeEEEEEeCC-CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 365 IIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 365 ~ig~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
++|+|.||+||-|+..+ ...+|||-+..+. .+..+-...|+.+.+.++|.|||+++|.|..++ +.-|.||-+|
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekd----sr~~QPLhEEIaLH~~LrHkNIVrYLGs~senG--f~kIFMEqVP 655 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKD----SREVQPLHEEIALHSTLRHKNIVRYLGSVSENG--FFKIFMEQVP 655 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeeccccc----chhhccHHHHHHHHHHHhhHhHHHHhhccCCCC--eEEEEeecCC
Confidence 79999999999999874 5678999885443 233456889999999999999999999998776 7889999999
Q ss_pred CCChhhhhccCCCCCC--CHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeec-CCCCeeeCCCchhhhcc
Q 009965 444 NGTLYEHLHYGERCQV--SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT-EDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l--~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld-~~~~~kl~DfGla~~~~ 516 (521)
+|+|.+.|+.+-+ ++ .+.+.-.+.+||.+||.|||+. .|||||||-.|||++ -.|.+||+|||-+|.+.
T Consensus 656 GGSLSsLLrskWG-PlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA 727 (1226)
T KOG4279|consen 656 GGSLSSLLRSKWG-PLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA 727 (1226)
T ss_pred CCcHHHHHHhccC-CCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhc
Confidence 9999999975543 45 7788888999999999999999 999999999999996 47899999999988753
|
|
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.83 E-value=3e-20 Score=188.00 Aligned_cols=144 Identities=21% Similarity=0.217 Sum_probs=121.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC----CceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~lv 438 (521)
+.||+|+||.||++... ++..||||++.... ......+.+.+|+.++.+++||||+++++++..... ...++|
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv 98 (343)
T cd07880 21 KQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF--QSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLV 98 (343)
T ss_pred EEeeecCCeEEEEEEECCCCcEEEEEEecccc--cchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEE
Confidence 68999999999999875 78899999874321 122334568899999999999999999999875431 135899
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|||+ +++|.+++.. ..+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 99 ~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~ 169 (343)
T cd07880 99 MPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQTD 169 (343)
T ss_pred EecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccccccc
Confidence 9999 6699888753 2489999999999999999999998 99999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.6e-20 Score=187.57 Aligned_cols=156 Identities=21% Similarity=0.176 Sum_probs=127.0
Q ss_pred HHHHHHHHhhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEe
Q 009965 352 RQELEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCR 428 (521)
Q Consensus 352 ~~~l~~~~~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~ 428 (521)
..++...+++|. +.||+|+||.||+|... ++..||+|++..... .....+.+.+|+.++.+++||||+++.+++.
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~ 86 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ--SIIHAKRTYRELRLLKHMKHENVIGLLDVFT 86 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch--hhHHHHHHHHHHHHHHHcCCCcccceeeeee
Confidence 345555667776 78999999999999875 788999998743211 1223456888999999999999999999886
Q ss_pred cCC----CCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCe
Q 009965 429 ESS----PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSP 504 (521)
Q Consensus 429 ~~~----~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~ 504 (521)
... ....++++|++ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||++++++.+
T Consensus 87 ~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~ 159 (345)
T cd07877 87 PARSLEEFNDVYLVTHLM-GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCEL 159 (345)
T ss_pred ecccccccccEEEEehhc-ccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCE
Confidence 432 11467888887 67998887532 489999999999999999999998 99999999999999999999
Q ss_pred eeCCCchhhhcc
Q 009965 505 KVSPLCLSFLLV 516 (521)
Q Consensus 505 kl~DfGla~~~~ 516 (521)
||+|||+++...
T Consensus 160 kl~dfg~~~~~~ 171 (345)
T cd07877 160 KILDFGLARHTD 171 (345)
T ss_pred EEeccccccccc
Confidence 999999988654
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=9.9e-21 Score=200.61 Aligned_cols=151 Identities=13% Similarity=0.172 Sum_probs=114.7
Q ss_pred hhhh--chhCcCCCeeEEEEEeCC--CCEEEEEEe-------------eeeccccchhhHHHHHHHHHHHhccCCCCccc
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMKG--GPEIAVISL-------------CIKEEHWTGYLELYFQREVADLARINHENTGK 422 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~~--~~~vavk~~-------------~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~ 422 (521)
.+|. +.||+|+||+||++..+. +...++|.+ ..+...........+.+|+.++.+++|||||+
T Consensus 148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~ 227 (501)
T PHA03210 148 AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILK 227 (501)
T ss_pred hccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCc
Confidence 4454 789999999999997652 222222211 01111111223456889999999999999999
Q ss_pred eeeEEecCCCCceEEEEecCCCCChhhhhccCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeec
Q 009965 423 LLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE---RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT 499 (521)
Q Consensus 423 l~g~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld 499 (521)
+++++...+ ..++|+|++.. ++.+++.... .......+..+|+.|++.||+|||+. +|+||||||+|||++
T Consensus 228 l~~~~~~~~--~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl~ 301 (501)
T PHA03210 228 IEEILRSEA--NTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLN 301 (501)
T ss_pred EeEEEEECC--eeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC
Confidence 999998877 78999999964 7888775322 11233556778999999999999998 999999999999999
Q ss_pred CCCCeeeCCCchhhhcc
Q 009965 500 EDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 500 ~~~~~kl~DfGla~~~~ 516 (521)
.++.+||+|||+++.+.
T Consensus 302 ~~~~vkL~DFGla~~~~ 318 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFE 318 (501)
T ss_pred CCCCEEEEeCCCceecC
Confidence 99999999999998764
|
|
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.3e-20 Score=187.09 Aligned_cols=145 Identities=20% Similarity=0.172 Sum_probs=123.0
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccch----------hhHHHHHHHHHHHhccCCCCccceeeEEecCCC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTG----------YLELYFQREVADLARINHENTGKLLGYCRESSP 432 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~----------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 432 (521)
+.||+|+||+||+|+.. +++.||+|.+......... .....+.+|++++..++||||+++++++...+
T Consensus 15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 93 (335)
T PTZ00024 15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGD- 93 (335)
T ss_pred hcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCC-
Confidence 67999999999999976 6889999988543211100 01125788999999999999999999998776
Q ss_pred CceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchh
Q 009965 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512 (521)
Q Consensus 433 ~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla 512 (521)
..++||||++ |+|.+++.... .+++.....++.|++.||+|||+. +++||||||+||++++++.++|+|||++
T Consensus 94 -~~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~kl~dfg~~ 166 (335)
T PTZ00024 94 -FINLVMDIMA-SDLKKVVDRKI--RLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICKIADFGLA 166 (335)
T ss_pred -cEEEEEeccc-cCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEEECCccce
Confidence 7899999997 69999985433 488999999999999999999998 9999999999999999999999999998
Q ss_pred hhcc
Q 009965 513 FLLV 516 (521)
Q Consensus 513 ~~~~ 516 (521)
+.+.
T Consensus 167 ~~~~ 170 (335)
T PTZ00024 167 RRYG 170 (335)
T ss_pred eecc
Confidence 8665
|
|
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.6e-20 Score=184.95 Aligned_cols=143 Identities=15% Similarity=0.077 Sum_probs=119.2
Q ss_pred hhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCCC
Q 009965 365 IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASN 444 (521)
Q Consensus 365 ~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~~ 444 (521)
.+|.|+++.||+++. +++.||+|++.... ......+.+.+|+.+++.++||||+++++++...+ ..+++|||+++
T Consensus 9 ~~~~~~~v~~~~~~~-~~~~~avK~~~~~~--~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~--~~~~~~e~~~~ 83 (314)
T cd08216 9 CFEDLMIVHLAKHKP-TNTLVAVKKINLDS--CSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDS--ELYVVSPLMAY 83 (314)
T ss_pred hhcCCceEEEEEecC-CCCEEEEEEEeccc--cchhHHHHHHHHHHHHHhcCCcchhhhhheeecCC--eEEEEEeccCC
Confidence 344445555555544 68899999985432 12234467999999999999999999999998877 78999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 445 GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 445 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
|+|.+++.......+++.....++.|+++||+|||+. +|+||||||+||++++++.+||+|||.+..+
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~ 151 (314)
T cd08216 84 GSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSM 151 (314)
T ss_pred CCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceee
Confidence 9999999754445688999999999999999999999 9999999999999999999999999988654
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.6e-20 Score=181.71 Aligned_cols=144 Identities=17% Similarity=0.167 Sum_probs=120.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|+.. ++..+|+|++...... .......+|+.++.++. |+|++++++++.+......++|+||
T Consensus 5 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~ 81 (282)
T cd07831 5 GKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKS---LEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFEL 81 (282)
T ss_pred eeccccccceEEEEEEcCCCcEEEEEEehhccCC---chhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEec
Confidence 67999999999999986 6889999987543221 12234467888999885 9999999999987632378999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++ |++.+++.... ..++|.++..++.|++.||+|||+. +++||||||+||++++ +.+||+|||+++.+.
T Consensus 82 ~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~ 150 (282)
T cd07831 82 MD-MNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIY 150 (282)
T ss_pred CC-ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccc
Confidence 97 58888886433 3589999999999999999999998 9999999999999999 999999999998654
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.83 E-value=3e-20 Score=179.44 Aligned_cols=147 Identities=21% Similarity=0.210 Sum_probs=127.3
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||+++.. ++..+++|.+..... ......++.+|+.++++++|+||+++.+++.... ..++|+||+
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~v~e~~ 81 (256)
T cd08530 6 KKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSM--SQKEREDAVNEIRILASVNHPNIISYKEAFLDGN--KLCIVMEYA 81 (256)
T ss_pred eeecCCCceeEEEEEECCCCCEEEEEEEehhhc--cHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCC--EEEEEehhc
Confidence 68999999999999876 678899998854321 1233557889999999999999999999998776 899999999
Q ss_pred CCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++++|.+++... ....+++..+..++.++++||+|||+. +++|+||+|+||++++++.+||+|||+++....
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~ 155 (256)
T cd08530 82 PFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKK 155 (256)
T ss_pred CCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhcc
Confidence 999999998642 234689999999999999999999998 999999999999999999999999999987654
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.3e-20 Score=176.25 Aligned_cols=144 Identities=22% Similarity=0.302 Sum_probs=127.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||++... ++..+++|++..... ...+.+.+|++++++++|+|++++++++.... ..++++||+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~l~~e~~ 79 (253)
T cd05122 6 EKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK----EKKEKIINEIQILKKCKHPNIVKYYGSYLKKD--ELWIVMEFC 79 (253)
T ss_pred eeeccCCceEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC--eEEEEEecC
Confidence 67999999999999987 688899999854322 23467899999999999999999999998876 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++++|.+++.... ..+++..+..++.++++||+|||+. +++||||+|+||++++++.++|+|||.+.....
T Consensus 80 ~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 150 (253)
T cd05122 80 SGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSD 150 (253)
T ss_pred CCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeeccccccccc
Confidence 9999999986442 4689999999999999999999998 999999999999999999999999999887654
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.8e-20 Score=197.45 Aligned_cols=148 Identities=13% Similarity=0.119 Sum_probs=115.7
Q ss_pred HHHHHhhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCC------CCccceee
Q 009965 355 LEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH------ENTGKLLG 425 (521)
Q Consensus 355 l~~~~~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H------~niv~l~g 425 (521)
+...+.+|. ++||+|+||+||+|+.. +++.||||++.... ...+++..|+.++.+++| .+++++++
T Consensus 124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~ 198 (467)
T PTZ00284 124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQR 198 (467)
T ss_pred cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-----hhHHHHHHHHHHHHHHhhcCcccCcceeeeEE
Confidence 333445565 78999999999999886 57889999984321 122345567776666654 45889999
Q ss_pred EEecCCCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeEecCCCCCCeeecCCC--
Q 009965 426 YCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTEDF-- 502 (521)
Q Consensus 426 ~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlk~~NiLld~~~-- 502 (521)
++..... ..++|||++ +++|.+++... ..+++..+..|+.||+.||+|||+ . +||||||||+|||++.++
T Consensus 199 ~~~~~~~-~~~iv~~~~-g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~~~ 271 (467)
T PTZ00284 199 YFQNETG-HMCIVMPKY-GPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSDTV 271 (467)
T ss_pred EEEcCCc-eEEEEEecc-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCCcc
Confidence 8876432 688999998 56899988643 358999999999999999999997 5 899999999999998765
Q ss_pred --------------CeeeCCCchhhh
Q 009965 503 --------------SPKVSPLCLSFL 514 (521)
Q Consensus 503 --------------~~kl~DfGla~~ 514 (521)
.+||+|||++..
T Consensus 272 ~~~~~~~~~~~~~~~vkl~DfG~~~~ 297 (467)
T PTZ00284 272 VDPVTNRALPPDPCRVRICDLGGCCD 297 (467)
T ss_pred cccccccccCCCCceEEECCCCcccc
Confidence 499999998764
|
|
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.7e-20 Score=181.27 Aligned_cols=147 Identities=21% Similarity=0.279 Sum_probs=122.3
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc---CCCCccceeeEEecCCC---CceE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI---NHENTGKLLGYCRESSP---FTRM 436 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~~~~---~~~~ 436 (521)
+.||+|+||.||+|+.+ ++..+|+|++..+... ......+.+|+.++.++ +|||++++++++..... ...+
T Consensus 5 ~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~ 82 (287)
T cd07838 5 AEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSE--EGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLT 82 (287)
T ss_pred EEecccCceEEEEEEECCCCCEEEEEEecccccc--chhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeE
Confidence 67999999999999997 5899999998544321 12234566788777665 69999999999987651 1289
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|||+++ +|.+++.......++|..+..++.|+++||+|||+. +++|+||+|+||++++++.+||+|||+++.+.
T Consensus 83 l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~ 158 (287)
T cd07838 83 LVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLARIYS 158 (287)
T ss_pred EEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCcceecc
Confidence 99999974 899988754444689999999999999999999998 99999999999999999999999999987764
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.7e-20 Score=187.84 Aligned_cols=143 Identities=24% Similarity=0.280 Sum_probs=120.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC---CceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP---FTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~---~~~~lv~ 439 (521)
+.||+|+||.||+|+.. ++..||+|.+..... .....++.+|+.++.+++||||+++++++..... ...++|+
T Consensus 11 ~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 87 (336)
T cd07849 11 SYIGEGAYGMVCSATHKPTGVKVAIKKISPFEH---QTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQ 87 (336)
T ss_pred EEEEecCCeEEEEEEEcCCCCeEEEEEeccccc---chhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEe
Confidence 78999999999999876 688999998743211 2234568889999999999999999998765431 1479999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
||+++ ++.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 88 e~~~~-~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 157 (336)
T cd07849 88 ELMET-DLYKLIKT---QHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLARIAD 157 (336)
T ss_pred hhccc-CHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccceeecc
Confidence 99975 88887743 2489999999999999999999999 99999999999999999999999999987653
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.6e-20 Score=186.80 Aligned_cols=148 Identities=18% Similarity=0.216 Sum_probs=122.9
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC----
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP---- 432 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~---- 432 (521)
.+|. +.||+|+||.||+|+.. +++.||+|.+..... ......++.+|+.++.+++||||+++++++.....
T Consensus 16 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 16 KRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQ--NVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred cceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCcccc--ChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4454 78999999999999986 788999998743221 12233567789999999999999999999864321
Q ss_pred CceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchh
Q 009965 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512 (521)
Q Consensus 433 ~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla 512 (521)
...++||||+++ +|.+.+... +++.++..++.|++.||+|||+. +++||||||+||++++++.+||+|||++
T Consensus 94 ~~~~lv~e~~~~-~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg~~ 165 (353)
T cd07850 94 QDVYLVMELMDA-NLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 165 (353)
T ss_pred CcEEEEEeccCC-CHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCccc
Confidence 246999999964 888887522 78999999999999999999998 9999999999999999999999999999
Q ss_pred hhccc
Q 009965 513 FLLVS 517 (521)
Q Consensus 513 ~~~~~ 517 (521)
+....
T Consensus 166 ~~~~~ 170 (353)
T cd07850 166 RTAGT 170 (353)
T ss_pred eeCCC
Confidence 87643
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.9e-20 Score=177.89 Aligned_cols=135 Identities=16% Similarity=0.096 Sum_probs=112.7
Q ss_pred hCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEEEecCC
Q 009965 366 IGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 366 ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+|+|+||.||+++.+ ++..+|+|.+..+... .. |+.....+ +|||++++++++...+ ..++||||++
T Consensus 24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~-------~~--e~~~~~~~~~h~~iv~~~~~~~~~~--~~~iv~e~~~ 92 (267)
T PHA03390 24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN-------AI--EPMVHQLMKDNPNFIKLYYSVTTLK--GHVLIMDYIK 92 (267)
T ss_pred ecCCCceEEEEEEEcCCCcEEEEEEEehhhcc-------hh--hHHHHHHhhcCCCEEEEEEEEecCC--eeEEEEEcCC
Confidence 599999999999886 6788888887433211 01 22222222 7999999999998877 8999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCC-CeeeCCCchhhhcc
Q 009965 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-SPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~-~~kl~DfGla~~~~ 516 (521)
+|+|.+++.... .++|.++..++.|+++||+|||+. +++||||||+||+++.++ .++|+|||+++.+.
T Consensus 93 ~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~ 161 (267)
T PHA03390 93 DGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIG 161 (267)
T ss_pred CCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecCccceecC
Confidence 999999996443 689999999999999999999998 999999999999999988 99999999987654
|
|
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.83 E-value=9e-20 Score=182.12 Aligned_cols=144 Identities=22% Similarity=0.236 Sum_probs=123.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. ++..|++|.+...... .....+.+.+|++++++++|||++++++++.+.. ..++||||+
T Consensus 27 ~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 103 (313)
T cd06633 27 HEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQ-TNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEH--TAWLVMEYC 103 (313)
T ss_pred eeeccCCCeEEEEEEECCCCcEEEEEEEeccccC-chHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCC--EEEEEEecC
Confidence 57999999999999886 6889999988543222 2223456889999999999999999999998877 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
. |++.+++... ..+++|.++..++.|++.|++|||+. +++||||||+||++++++.+||+|||++...
T Consensus 104 ~-~~l~~~l~~~-~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~ 171 (313)
T cd06633 104 L-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKS 171 (313)
T ss_pred C-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCccc
Confidence 6 5888887533 34589999999999999999999998 9999999999999999999999999987643
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.1e-20 Score=177.22 Aligned_cols=144 Identities=26% Similarity=0.198 Sum_probs=124.8
Q ss_pred hCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCCC
Q 009965 366 IGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASN 444 (521)
Q Consensus 366 ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~~ 444 (521)
||+|+||.||++... ++..+++|.+..... ........+..|+.++++++||||+++++.+.... ..++||||+++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e~~~~ 77 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKI-IKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEE--KLYLVLEYAPG 77 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhh-cchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCC--eeEEEEecCCC
Confidence 689999999999987 588999998754321 12223457899999999999999999999998776 78999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 445 GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 445 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++|.+++.... .+++.....++.|+++|+.|||+. +++|+||+|+||++++++.++|+|||++.....
T Consensus 78 ~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~ 145 (250)
T cd05123 78 GELFSHLSKEG--RFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSS 145 (250)
T ss_pred CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceeccc
Confidence 99999996443 589999999999999999999998 999999999999999999999999999876543
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.8e-21 Score=186.59 Aligned_cols=152 Identities=18% Similarity=0.118 Sum_probs=131.9
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceE
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
+.|. .+||+|+||.||-++.+ +|+.+|.|++.++.. ..++.+.-.++|-.+|.+++.+-||.+--.|+..+ ..+
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRi-Kkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd--~LC 261 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRI-KKRKGETMALNEKQILEKVSSPFIVSLAYAFETKD--ALC 261 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHH-HHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCC--ceE
Confidence 3454 79999999999999887 799999999865542 12334455788999999999999999988887776 899
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+|+..|.+|+|.-+|...+...+++.+..-+|.+|+-||++||+. +||.||+||+|||+|++|+++|+|+|||-.+.
T Consensus 262 lVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~ 338 (591)
T KOG0986|consen 262 LVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIP 338 (591)
T ss_pred EEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecC
Confidence 999999999999998766656799999999999999999999999 99999999999999999999999999997654
Q ss_pred c
Q 009965 517 S 517 (521)
Q Consensus 517 ~ 517 (521)
.
T Consensus 339 ~ 339 (591)
T KOG0986|consen 339 E 339 (591)
T ss_pred C
Confidence 3
|
|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.9e-21 Score=203.38 Aligned_cols=155 Identities=20% Similarity=0.132 Sum_probs=131.3
Q ss_pred HHHHHHhhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecC
Q 009965 354 ELEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430 (521)
Q Consensus 354 ~l~~~~~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 430 (521)
++....++|. ++||+|+||.|..++++ +++.+|+|++.+- ....+.....|..|-.+|..-..+-|+.+.-.|.++
T Consensus 69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~-eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 69 ELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKW-EMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE 147 (1317)
T ss_pred HHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHH-HHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence 3343445665 89999999999999997 6889999998532 112233456799999999999999999999889888
Q ss_pred CCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCc
Q 009965 431 SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLC 510 (521)
Q Consensus 431 ~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfG 510 (521)
. +.|+|||||+||+|-.++..-. ++++.....+...|.-||+-+|+. |+|||||||.|||||..|++||+|||
T Consensus 148 ~--~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFG 220 (1317)
T KOG0612|consen 148 R--YLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFG 220 (1317)
T ss_pred c--ceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccch
Confidence 7 8999999999999999996433 588888888999999999999999 99999999999999999999999999
Q ss_pred hhhhcc
Q 009965 511 LSFLLV 516 (521)
Q Consensus 511 la~~~~ 516 (521)
-+-.++
T Consensus 221 sClkm~ 226 (1317)
T KOG0612|consen 221 SCLKMD 226 (1317)
T ss_pred hHHhcC
Confidence 776665
|
|
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.1e-19 Score=181.15 Aligned_cols=145 Identities=19% Similarity=0.226 Sum_probs=123.3
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. ++..+|+|.+...... .....+++.+|+++++.++|+|++++.+++.... ..++|+||+
T Consensus 21 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 97 (308)
T cd06634 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ-SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH--TAWLVMEYC 97 (308)
T ss_pred HheeeCCCEEEEEEEEcCCCcEEEEEEEeccccc-ChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCC--eeEEEEEcc
Confidence 67999999999999986 6788999987532211 2233456889999999999999999999998876 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
. |++.+++.... .++++.++..++.+++.||.|||+. +++||||||+||++++++.++|+|||++..+.
T Consensus 98 ~-~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 166 (308)
T cd06634 98 L-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 166 (308)
T ss_pred C-CCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeec
Confidence 7 68888775332 3589999999999999999999998 99999999999999999999999999987654
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.3e-20 Score=184.99 Aligned_cols=151 Identities=19% Similarity=0.181 Sum_probs=125.3
Q ss_pred HHHHhhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC
Q 009965 356 EVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432 (521)
Q Consensus 356 ~~~~~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 432 (521)
...+++|. +.||+|+||.||++... ++..||+|++..... .....+.+.+|+.++.+++||||+++.+++.....
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 83 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFS--TPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE 83 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccc--ccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence 34556665 78999999999999876 789999998743221 12234568899999999999999999999865332
Q ss_pred CceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchh
Q 009965 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512 (521)
Q Consensus 433 ~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla 512 (521)
..++|+||+. ++|.++++.. .+++.....++.|+++||+|||+. +|+||||||+||++++++.++|+|||++
T Consensus 84 -~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~ 155 (328)
T cd07856 84 -DIYFVTELLG-TDLHRLLTSR---PLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLA 155 (328)
T ss_pred -cEEEEeehhc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCccccc
Confidence 6889999995 5899888532 478888899999999999999998 9999999999999999999999999998
Q ss_pred hhcc
Q 009965 513 FLLV 516 (521)
Q Consensus 513 ~~~~ 516 (521)
+...
T Consensus 156 ~~~~ 159 (328)
T cd07856 156 RIQD 159 (328)
T ss_pred cccC
Confidence 7654
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.82 E-value=6e-20 Score=185.73 Aligned_cols=143 Identities=22% Similarity=0.234 Sum_probs=119.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC----CceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~lv 438 (521)
+.||+|+||.||+|+.. ++..||+|++..... .......+.+|+.++.+++||||+++++++..... ...++|
T Consensus 21 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv 98 (342)
T cd07879 21 KQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ--SEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLV 98 (342)
T ss_pred EEeeecCCeEEEEEEeCCCCcEEEEEEecCccc--cccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEE
Confidence 78999999999999975 689999998753221 12234568899999999999999999999865431 146899
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+||+.. +|.++.. ..+++..+..++.|+++||+|||+. +++||||||+||++++++.+||+|||+++...
T Consensus 99 ~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~ 168 (342)
T cd07879 99 MPYMQT-DLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGLARHAD 168 (342)
T ss_pred eccccc-CHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCCCcCCC
Confidence 999975 7777652 2488999999999999999999998 99999999999999999999999999988653
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.3e-21 Score=193.92 Aligned_cols=141 Identities=16% Similarity=0.129 Sum_probs=121.2
Q ss_pred chhCcCCCeeEEEEEeCCC-CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMKGG-PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~-~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
-.+|.|+||.||+++.++. -..|.|.+..+. +....+|+-|++||+.+.||+||+|++.|+..+ ..+++.|||
T Consensus 38 GELGDGAFGKVyKA~nket~~lAAaKvIetks----eEELEDylVEIeILa~CdHP~ivkLl~ayy~en--kLwiliEFC 111 (1187)
T KOG0579|consen 38 GELGDGAFGKVYKAVNKETKLLAAAKVIETKS----EEELEDYLVEIEILAECDHPVIVKLLSAYYFEN--KLWILIEFC 111 (1187)
T ss_pred hhhcCccchhhhhhhcccchhhhhhhhhcccc----hhHHhhhhhhhhhhhcCCChHHHHHHHHHhccC--ceEEEEeec
Confidence 3588999999999998754 445566664332 334568999999999999999999999888777 799999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
.+|.++..+-+- ..+|+..++.-++.+++.||.|||+. .|||||||+.|||+.-+|.++++|||.+..
T Consensus 112 ~GGAVDaimlEL-~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAK 179 (1187)
T KOG0579|consen 112 GGGAVDAIMLEL-GRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAK 179 (1187)
T ss_pred CCchHhHHHHHh-ccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeeccccccc
Confidence 999999887533 34799999999999999999999999 999999999999999999999999998653
|
|
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.82 E-value=8e-20 Score=180.94 Aligned_cols=145 Identities=19% Similarity=0.169 Sum_probs=120.1
Q ss_pred hchhCcCCCeeEEEEEeCC-CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCCccceeeEEecCCCCceEEEEe
Q 009965 363 SNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
.+.||+|++|.||+|+.++ ++.||||.+..... .....++.+|+.++.+.. ||||+++++++.+.. ..+++||
T Consensus 20 ~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~---~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~--~~~~v~e 94 (296)
T cd06618 20 LGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN---KEENKRILMDLDVVLKSHDCPYIVKCYGYFITDS--DVFICME 94 (296)
T ss_pred eeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC---hHHHHHHHHHHHHHHhccCCCchHhhheeeecCC--eEEEEee
Confidence 3789999999999999974 88999999853321 123455677887777774 999999999998877 7999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|+++ ++.+++... ...+++..+.+|+.++++||+|||+. ++|+||||+|+||++++++.+||+|||+++.+.
T Consensus 95 ~~~~-~l~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~ 166 (296)
T cd06618 95 LMST-CLDKLLKRI-QGPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGISGRLV 166 (296)
T ss_pred ccCc-CHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECccccchhcc
Confidence 9964 777766432 23689999999999999999999973 289999999999999999999999999988654
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=2e-20 Score=165.02 Aligned_cols=148 Identities=16% Similarity=0.173 Sum_probs=124.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
..||+|++|.|-+-++. +|...|+|++...-. .+..++..+|+.+..+. ..|.+|.++|.+.... ..++.||.
T Consensus 52 ~elGrGayG~vekmrh~~sg~imAvKri~~tvn---~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~reg--dvwIcME~ 126 (282)
T KOG0984|consen 52 EELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN---SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREG--DVWICMEL 126 (282)
T ss_pred hhhcCCccchhhheeeccCCeEEEEeeehhhcC---hHHHHHHHHhhhhhccCCCCCeEEEeehhhhccc--cEEEeHHH
Confidence 57999999999888875 799999999865432 34556788899886655 7999999999887766 79999999
Q ss_pred CCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccccc
Q 009965 442 ASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSSI 519 (521)
Q Consensus 442 ~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~~~ 519 (521)
|.- ||+.+-++ .....+++.-.-+||..|..||.|||++. .++|||+||+||||+.+|++|+||||++-.+.+++
T Consensus 127 M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSi 203 (282)
T KOG0984|consen 127 MDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYLVDSI 203 (282)
T ss_pred hhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceeehhhh
Confidence 976 88877542 23445889999999999999999999874 89999999999999999999999999998877653
|
|
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.2e-20 Score=182.25 Aligned_cols=146 Identities=16% Similarity=0.229 Sum_probs=121.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC------CceE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP------FTRM 436 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~------~~~~ 436 (521)
+.||+|+||.||+|+.. +++.+|+|++..+... ......+.+|++++.+++||||+++++++.+... ...+
T Consensus 14 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~ 91 (311)
T cd07866 14 GKLGEGTFGEVYKARQIKTGRVVALKKILMHNEK--DGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVY 91 (311)
T ss_pred EEeccCCCEEEEEEEECCCCcEEEEEEEEeccCC--CCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCceEE
Confidence 78999999999999986 6889999998544321 1123457789999999999999999998754331 1469
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+|+||+++ ++.+.+... ...+++.++..++.|+++||+|||+. +++||||||+||++++++.+||+|||+++...
T Consensus 92 lv~~~~~~-~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 166 (311)
T cd07866 92 MVTPYMDH-DLSGLLENP-SVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADFGLARPYD 166 (311)
T ss_pred EEEecCCc-CHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcCccchhcc
Confidence 99999975 787777533 33589999999999999999999998 99999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.5e-21 Score=175.75 Aligned_cols=158 Identities=17% Similarity=0.138 Sum_probs=129.7
Q ss_pred cccCHHHHHHHHhhhhchhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceee
Q 009965 348 VRFSRQELEVACEDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLG 425 (521)
Q Consensus 348 ~~~~~~~l~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g 425 (521)
..|+.++++.. ..||.|+||+|+|-.++ .|+..|||++..... ..+.++++.|.+...+- +.||||+++|
T Consensus 59 ~~F~~~~Lqdl-----g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~---~keq~rll~e~d~~mks~~cp~IVkfyG 130 (361)
T KOG1006|consen 59 HTFTSDNLQDL-----GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI---EKEQKRLLMEHDTVMKSSNCPNIVKFYG 130 (361)
T ss_pred cccccchHHHH-----HHhcCCcchhhhhhhcCccCcEEEEEEeeeccc---hHHHHHHHHHHHHHHhhcCCcHHHHHhh
Confidence 45666666655 47999999999999886 799999999854332 35567899999876666 7899999999
Q ss_pred EEecCCCCceEEEEecCCCCChhhhhc---cCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCC
Q 009965 426 YCRESSPFTRMLVFDYASNGTLYEHLH---YGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF 502 (521)
Q Consensus 426 ~~~~~~~~~~~lv~ey~~~gsL~~~l~---~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~ 502 (521)
.+...+ ..|+-||.|.- |++.+.+ .-....+++...-+|......||.||-+. ..|||||+||+|||+|..|
T Consensus 131 a~F~EG--dcWiCMELMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILldr~G 205 (361)
T KOG1006|consen 131 ALFSEG--DCWICMELMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLDRHG 205 (361)
T ss_pred hhhcCC--ceeeeHHHHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEecCC
Confidence 998766 79999999975 7766543 22334588888899999999999999976 3899999999999999999
Q ss_pred CeeeCCCchhhhcccc
Q 009965 503 SPKVSPLCLSFLLVSS 518 (521)
Q Consensus 503 ~~kl~DfGla~~~~~~ 518 (521)
.+|+||||++-.+.++
T Consensus 206 ~vKLCDFGIcGqLv~S 221 (361)
T KOG1006|consen 206 DVKLCDFGICGQLVDS 221 (361)
T ss_pred CEeeecccchHhHHHH
Confidence 9999999998877654
|
|
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.8e-20 Score=179.68 Aligned_cols=144 Identities=22% Similarity=0.260 Sum_probs=125.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|.+|.||+|+.. +++.+|+|.+.... ......+.+..|+.++++++|+|++++++++.+.. ..++|+||+
T Consensus 5 ~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~~v~e~~ 80 (282)
T cd07829 5 EKLGEGTYGVVYKARDKKTGEIVALKKIRLDN--EEEGIPSTALREISLLKELKHPNIVKLLDVIHTER--KLYLVFEYC 80 (282)
T ss_pred hcccccCcceEEEeeecCCCcEEEEEEecccc--ccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCC--ceEEEecCc
Confidence 57999999999999987 58899999986543 11223456788999999999999999999998776 799999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+ ++|.+++.... ..+++..+.+++.++++||+|||+. +|+||||+|+||++++++.+||+|||+++...
T Consensus 81 ~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~ 149 (282)
T cd07829 81 D-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFG 149 (282)
T ss_pred C-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccC
Confidence 8 59999997542 3589999999999999999999998 99999999999999999999999999987653
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.5e-20 Score=183.92 Aligned_cols=145 Identities=17% Similarity=0.191 Sum_probs=122.0
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC---CceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP---FTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~---~~~~lv~ 439 (521)
+.||+|+||+||+++.. ++..||||.+..... .......+.+|+.++..++|+||+++++++..... ...++||
T Consensus 11 ~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~ 88 (337)
T cd07858 11 KPIGRGAYGIVCSAKNSETNEKVAIKKIANAFD--NRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVY 88 (337)
T ss_pred EEeccCCCeEEEEEEecCCCCeEEEEEeccccc--ccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEE
Confidence 68999999999999886 688999998753321 12223467789999999999999999998864321 1479999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
||+. ++|.+++... ..+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||+++...
T Consensus 89 e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 159 (337)
T cd07858 89 ELMD-TDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLARTTS 159 (337)
T ss_pred eCCC-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCccccccC
Confidence 9996 6899988643 3589999999999999999999998 99999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.5e-19 Score=182.13 Aligned_cols=145 Identities=16% Similarity=0.133 Sum_probs=119.6
Q ss_pred chhCcCCCeeEEEEEeC-C--CCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecC--CCCceEE
Q 009965 364 NIIGSSPDSLVYKGTMK-G--GPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRES--SPFTRML 437 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~--~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~--~~~~~~l 437 (521)
+.||+|+||.||+++.. . +..+|+|++..... .....+.+.+|++++.++ +||||+++++++... .....++
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 83 (332)
T cd07857 6 KELGQGAYGIVCSARNAETSEEETVAIKKITNVFS--KKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYL 83 (332)
T ss_pred EEccccCCeEEEEEEeCCCCcCceEEEEEeccccc--cchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEE
Confidence 68999999999999986 4 67899998743211 122345688999999999 599999999976432 1125788
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 438 v~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++||++ ++|.+++... ..+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 84 ~~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~ 156 (332)
T cd07857 84 YEELME-ADLHQIIRSG--QPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLARGFS 156 (332)
T ss_pred EEeccc-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCceecc
Confidence 899986 5999998533 3589999999999999999999998 99999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.7e-20 Score=191.62 Aligned_cols=148 Identities=22% Similarity=0.242 Sum_probs=128.5
Q ss_pred hchhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecC---CCCceEE
Q 009965 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRES---SPFTRML 437 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~---~~~~~~l 437 (521)
.++||+|.+|.||+++.. +++.+|+|+..... ....+...|.++++.. .|||++.++|++... .+++.||
T Consensus 24 ~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-----d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWL 98 (953)
T KOG0587|consen 24 IEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-----DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWL 98 (953)
T ss_pred EEEEeeccceeEEEEeeeecCceeeeEeecCCc-----cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEE
Confidence 389999999999999886 68889998874432 2245677888998888 799999999999632 2448999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 438 v~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
|||||.+|+..|+++.-.+..+.|..+..|+++++.|+.+||.. .++|||+|-.|||+++++.+|++|||++..++.
T Consensus 99 VMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKLvDFGvSaQlds 175 (953)
T KOG0587|consen 99 VMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDS 175 (953)
T ss_pred EeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEEeeeeeeeeeec
Confidence 99999999999999755566799999999999999999999999 999999999999999999999999999988775
Q ss_pred c
Q 009965 518 S 518 (521)
Q Consensus 518 ~ 518 (521)
+
T Consensus 176 T 176 (953)
T KOG0587|consen 176 T 176 (953)
T ss_pred c
Confidence 4
|
|
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.2e-19 Score=178.10 Aligned_cols=145 Identities=21% Similarity=0.277 Sum_probs=125.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|++|.||++... ++..+++|.+...... ......+.+|+.++++++|+||+++++++.... ..++|+||+
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~v~e~~ 80 (283)
T cd05118 5 GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFES--EGIPKTALREIKLLKELNHPNIIKLLDVFRHKG--DLYLVFEFM 80 (283)
T ss_pred eeeecCCCceEEEEEcCCCCcEEEEEEecccccc--chhHHHHHHHHHHHHHhcCCCcchHHHhhccCC--CEEEEEecc
Confidence 57999999999999886 6888999987543221 223457889999999999999999999998776 799999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++ ++.+++.... ..+++.++..++.++++||+|||+. +++|+||||+||++++++.++|+|||.+..+..
T Consensus 81 ~~-~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~ 150 (283)
T cd05118 81 DT-DLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGS 150 (283)
T ss_pred CC-CHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCC
Confidence 75 8988886433 4689999999999999999999998 999999999999999999999999999876543
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.81 E-value=1e-19 Score=176.48 Aligned_cols=147 Identities=17% Similarity=0.160 Sum_probs=119.1
Q ss_pred chhCcCCCeeEEEEEeCC-CCEEEEEEeeeec-cccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKE-EHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~-~~~vavk~~~~~~-~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+++... +..+++|.+..-. .........++..|+.++.+++||||+++++++.+.. ..++||||
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 83 (260)
T cd08222 6 QRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERD--AFCIITEY 83 (260)
T ss_pred eeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCC--ceEEEEEe
Confidence 689999999999998863 4445555542211 1111223345778999999999999999999998776 78999999
Q ss_pred CCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 442 ASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+++++|.++++. .....+++.++..++.|+++||+|||+. +++|+||||+||++++ +.++|+|||+++.+.
T Consensus 84 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 84 CEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred CCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence 999999998863 2334689999999999999999999998 9999999999999976 569999999987653
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.8e-19 Score=172.47 Aligned_cols=132 Identities=15% Similarity=0.082 Sum_probs=113.3
Q ss_pred CCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCCCCCh
Q 009965 369 SPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTL 447 (521)
Q Consensus 369 G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~~gsL 447 (521)
|.+|.||+++.. +++.+|+|++.... .+.+|...+....||||+++++++.+.+ ..++||||+++|+|
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~---------~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~lv~e~~~~~~L 72 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS---------EYSRERLTIIPHCVPNMVCLHKYIVSED--SVFLVLQHAEGGKL 72 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh---------hhhhHHHHHHhcCCCceeehhhheecCC--eEEEEEecCCCCCH
Confidence 889999999986 78899999984321 2334555555667999999999998776 78999999999999
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 448 YEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 448 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
.+++.... .+++..+..++.|+++||+|||+. +++||||||+||++++++.++++|||.+..+.
T Consensus 73 ~~~l~~~~--~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~ 136 (237)
T cd05576 73 WSHISKFL--NIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVE 136 (237)
T ss_pred HHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccc
Confidence 99986433 489999999999999999999998 99999999999999999999999999876554
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.3e-19 Score=195.41 Aligned_cols=145 Identities=22% Similarity=0.290 Sum_probs=125.2
Q ss_pred hchhCcCCCeeEEEEEeCC--------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCC
Q 009965 363 SNIIGSSPDSLVYKGTMKG--------GPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPF 433 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~~--------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 433 (521)
.+.+|+|.||.|++|.... ...||||.+..... ....+.+..|+++|..+ +|+||+.++|+|...+
T Consensus 301 ~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~---~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~-- 375 (609)
T KOG0200|consen 301 GKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENAS---SSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG-- 375 (609)
T ss_pred cceeecccccceEeEEEeecccccccceEEEEEEecccccC---cHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC--
Confidence 4689999999999997631 34699998743322 24567899999999999 7999999999998855
Q ss_pred ceEEEEecCCCCChhhhhccCC------C--------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeec
Q 009965 434 TRMLVFDYASNGTLYEHLHYGE------R--------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT 499 (521)
Q Consensus 434 ~~~lv~ey~~~gsL~~~l~~~~------~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld 499 (521)
..++|.||+++|+|.++++.+. . ..++..+.+.++.|||.||+||++. ++|||||.++|||+.
T Consensus 376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNVLi~ 452 (609)
T KOG0200|consen 376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNVLIT 452 (609)
T ss_pred ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhEEec
Confidence 7899999999999999997544 0 2388999999999999999999999 999999999999999
Q ss_pred CCCCeeeCCCchhhhc
Q 009965 500 EDFSPKVSPLCLSFLL 515 (521)
Q Consensus 500 ~~~~~kl~DfGla~~~ 515 (521)
++..+||+|||+||..
T Consensus 453 ~~~~~kIaDFGlar~~ 468 (609)
T KOG0200|consen 453 KNKVIKIADFGLARDH 468 (609)
T ss_pred CCCEEEEccccceecc
Confidence 9999999999999953
|
|
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.4e-19 Score=183.21 Aligned_cols=144 Identities=23% Similarity=0.218 Sum_probs=121.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC----CceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~lv 438 (521)
..||+|++|.||+|+.. ++..||+|++..... .....+.+.+|+.++++++|||++++.+++...+. ...++|
T Consensus 21 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv 98 (343)
T cd07851 21 SPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQ--SAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLV 98 (343)
T ss_pred EEeccCCceEEEEEEECCCCcEEEEEecccccc--hhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEEE
Confidence 78999999999999986 678999998743211 12233567889999999999999999998765441 137999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+||+ +++|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 99 ~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~ 169 (343)
T cd07851 99 THLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFGLARHTD 169 (343)
T ss_pred EecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccccccccc
Confidence 9999 4699998853 2489999999999999999999998 99999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.8e-19 Score=181.25 Aligned_cols=146 Identities=21% Similarity=0.215 Sum_probs=124.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCC---CCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS---PFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~---~~~~~lv~ 439 (521)
+.||+|++|.||+|+.. ++..+|+|++..... .....+.+.+|+.++..++||||+++.+++.... ....++||
T Consensus 6 ~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~ 83 (330)
T cd07834 6 KPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFD--DLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVT 83 (330)
T ss_pred eeecCCCCeEEEEEEeCCCCcEEEEEeeccccc--cchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEe
Confidence 68999999999999986 588999998854321 1233467899999999999999999999987652 12579999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
||+++ +|.+++.... .+++..+..++.++++||+|||+. +|+||||||+||++++++.++|+|||+++....
T Consensus 84 e~~~~-~l~~~l~~~~--~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~ 155 (330)
T cd07834 84 ELMET-DLHKVIKSPQ--PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARGVDP 155 (330)
T ss_pred cchhh-hHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEeecc
Confidence 99984 8999886433 699999999999999999999998 999999999999999999999999999987654
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.3e-20 Score=171.83 Aligned_cols=144 Identities=20% Similarity=0.122 Sum_probs=123.0
Q ss_pred hchhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEec
Q 009965 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
-+++|+|.||+|-.++-+ +++.+|+|++.+..- ........-..|-++|...+||-+..+--.+...+ ..+.||||
T Consensus 173 LKvLGkGTFGKVIL~rEKat~k~YAiKIlkKevi-iakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~d--rlCFVMey 249 (516)
T KOG0690|consen 173 LKVLGKGTFGKVILCREKATGKLYAIKILKKEVI-IAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQD--RLCFVMEY 249 (516)
T ss_pred HHHhcCCccceEEEEeecccCceeehhhhhhhhe-eehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCc--eEEEEEEE
Confidence 389999999999999887 789999999854322 12233445678899999999999999877777666 79999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
..+|.|.-+|.+ .+.+++....-+...|..||.|||+. +||.||+|.+|.|+|.||++||+||||.+.
T Consensus 250 anGGeLf~HLsr--er~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE 317 (516)
T KOG0690|consen 250 ANGGELFFHLSR--ERVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKE 317 (516)
T ss_pred ccCceEeeehhh--hhcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchh
Confidence 999999988854 33588888888899999999999999 999999999999999999999999999885
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=1e-19 Score=181.95 Aligned_cols=147 Identities=17% Similarity=0.202 Sum_probs=122.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeec---cccchh-hHHHHHHHHHHHhccC---CCCccceeeEEecCCCCce
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKE---EHWTGY-LELYFQREVADLARIN---HENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~---~~~~~~-~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~~ 435 (521)
..+|.|+||.|+.|.++ +..+|+||.+.+.+ ..|.+. ..-..-.|+.||+.++ |+||++++.++++++ ..
T Consensus 567 q~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd--~y 644 (772)
T KOG1152|consen 567 QPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDD--YY 644 (772)
T ss_pred eeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCC--ee
Confidence 68999999999999997 56788999885443 122111 0112456999999997 999999999999988 88
Q ss_pred EEEEecCC-CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 436 MLVFDYAS-NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 436 ~lv~ey~~-~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
||+||--. +-+|.+++..+. .+++....-|..||+.|+++||+. +|||||||-+||.+|.+|.+||+|||-|..
T Consensus 645 yl~te~hg~gIDLFd~IE~kp--~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klidfgsaa~ 719 (772)
T KOG1152|consen 645 YLETEVHGEGIDLFDFIEFKP--RMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLIDFGSAAY 719 (772)
T ss_pred EEEecCCCCCcchhhhhhccC--ccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEeeccchhh
Confidence 99999764 459999996444 489999999999999999999999 999999999999999999999999998876
Q ss_pred ccc
Q 009965 515 LVS 517 (521)
Q Consensus 515 ~~~ 517 (521)
..+
T Consensus 720 ~ks 722 (772)
T KOG1152|consen 720 TKS 722 (772)
T ss_pred hcC
Confidence 543
|
|
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.9e-19 Score=179.82 Aligned_cols=141 Identities=21% Similarity=0.331 Sum_probs=118.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC----------
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP---------- 432 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~---------- 432 (521)
+.||+|+||.||+|... ++..||+|.+..+.. ...+.+.+|++++++++||||+++++++.....
T Consensus 11 ~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~----~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~ 86 (342)
T cd07854 11 RPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP----QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLT 86 (342)
T ss_pred EEecCCCCEEEEEEEECCCCcEEEEEEEecCCC----chHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccccc
Confidence 78999999999999886 688999998854432 234568899999999999999999987754321
Q ss_pred --CceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeec-CCCCeeeCCC
Q 009965 433 --FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT-EDFSPKVSPL 509 (521)
Q Consensus 433 --~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld-~~~~~kl~Df 509 (521)
...++|+||++ ++|.+++... .+++.....++.|+++||.|||+. +++||||||+||+++ ++..+|++||
T Consensus 87 ~~~~~~lv~e~~~-~~L~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~kl~df 159 (342)
T cd07854 87 ELNSVYIVQEYME-TDLANVLEQG---PLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLKIGDF 159 (342)
T ss_pred ccceEEEEeeccc-ccHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEEECCc
Confidence 14689999997 5998888532 488999999999999999999998 999999999999997 4567899999
Q ss_pred chhhhc
Q 009965 510 CLSFLL 515 (521)
Q Consensus 510 Gla~~~ 515 (521)
|+++.+
T Consensus 160 g~~~~~ 165 (342)
T cd07854 160 GLARIV 165 (342)
T ss_pred ccceec
Confidence 999765
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.6e-20 Score=198.92 Aligned_cols=146 Identities=18% Similarity=0.210 Sum_probs=124.0
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
..||.|.||.||.|... +|...|+|-+...... ....+.+.+|+.++..++|||+|+++|+-...+ ..+|.||||
T Consensus 1241 ~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~--~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRe--kv~IFMEyC 1316 (1509)
T KOG4645|consen 1241 NFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD--HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHRE--KVYIFMEYC 1316 (1509)
T ss_pred cccCCcceeeeEEeecCCccchhhhhhhhcCccc--cccCcchHHHHHHHHhccCccccccCceeecHH--HHHHHHHHh
Confidence 68999999999999875 6788899877443221 334456889999999999999999999998877 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~~ 518 (521)
++|+|.+.+.... ..++.-..-+..|++.|++|||+. +||||||||.||+||..|.+|.+|||.|..+.+.
T Consensus 1317 ~~GsLa~ll~~gr--i~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1317 EGGSLASLLEHGR--IEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNN 1387 (1509)
T ss_pred ccCcHHHHHHhcc--hhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecCc
Confidence 9999999986332 355665666789999999999999 9999999999999999999999999999876654
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.79 E-value=9.4e-20 Score=163.03 Aligned_cols=140 Identities=16% Similarity=0.176 Sum_probs=119.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.+|+|.+++||.|..- +...++||.++.- ..+.+.+|+.+|..++ ||||+++++...+.......||+||
T Consensus 44 rk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV-------kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~ 116 (338)
T KOG0668|consen 44 RKVGRGKYSEVFEGINITNNEKCVIKILKPV-------KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEY 116 (338)
T ss_pred HHHcCccHhhHhcccccCCCceEEEeeechH-------HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhh
Confidence 68999999999999754 6677888887432 2346899999999996 9999999999988765578899999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC-CCCeeeCCCchhhhcccc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-DFSPKVSPLCLSFLLVSS 518 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~-~~~~kl~DfGla~~~~~~ 518 (521)
+.+.+...... .++..++..++.++.+||.|+|++ ||+|||+||.|++||. .-..+|+|+|||.++.+.
T Consensus 117 v~n~Dfk~ly~-----tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~ 186 (338)
T KOG0668|consen 117 VNNTDFKQLYP-----TLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG 186 (338)
T ss_pred hccccHHHHhh-----hhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhhcCCC
Confidence 99987776552 377788889999999999999999 9999999999999995 457999999999998764
|
|
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.6e-19 Score=164.16 Aligned_cols=155 Identities=17% Similarity=0.159 Sum_probs=125.7
Q ss_pred cCHHHHHHHHhhhhchhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEE
Q 009965 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYC 427 (521)
Q Consensus 350 ~~~~~l~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~ 427 (521)
.+..|++.. ..+|.|+-|.|++++++ +|..+|||.+.... .....++++..++++.+- ..|.||+.+|||
T Consensus 89 ~dindl~~l-----~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~---Nkee~kRILmDldvv~~s~dcpyIV~c~GyF 160 (391)
T KOG0983|consen 89 ADINDLENL-----GDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG---NKEENKRILMDLDVVLKSHDCPYIVQCFGYF 160 (391)
T ss_pred cChHHhhhH-----HhhcCCCccceEEEEEcccceEEEEEeecccC---CHHHHHHHHHhhhHHhhccCCCeeeeeeeEE
Confidence 344555544 46999999999999997 68899999885432 234456788888887766 489999999999
Q ss_pred ecCCCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeC
Q 009965 428 RESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVS 507 (521)
Q Consensus 428 ~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~ 507 (521)
..+. ..++.||.|.- .++.+++ +...++++...-++...+.+||.||.+++ +|+|||+||+|||+|+.|++|+|
T Consensus 161 i~n~--dV~IcMelMs~-C~ekLlk-rik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlC 234 (391)
T KOG0983|consen 161 ITNT--DVFICMELMST-CAEKLLK-RIKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLC 234 (391)
T ss_pred eeCc--hHHHHHHHHHH-HHHHHHH-HhcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEee
Confidence 8876 68899999964 5555554 34456889889999999999999999874 99999999999999999999999
Q ss_pred CCchhhhcccc
Q 009965 508 PLCLSFLLVSS 518 (521)
Q Consensus 508 DfGla~~~~~~ 518 (521)
|||++-.+.++
T Consensus 235 DFGIsGrlvdS 245 (391)
T KOG0983|consen 235 DFGISGRLVDS 245 (391)
T ss_pred cccccceeecc
Confidence 99999877654
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.6e-20 Score=170.51 Aligned_cols=145 Identities=19% Similarity=0.179 Sum_probs=122.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCC---ceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF---TRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~---~~~lv~ 439 (521)
..||-|+||.||.++.+ +|+.||.|++..- ...-...+++.+|++++..++|.|++..+++..-.+.. +.|+++
T Consensus 59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnv--fq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~T 136 (449)
T KOG0664|consen 59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNV--FQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLT 136 (449)
T ss_pred CcccccceeEEEeccCCCCccchhHhhcchH--HHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHH
Confidence 57999999999999986 8999999987432 11223456788999999999999999999887654422 578999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|.|.. +|...+. ..++++-....-+..||.+||.|||+. +|.||||||.|.|++.+-..||||||+||.-+
T Consensus 137 ELmQS-DLHKIIV--SPQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee 207 (449)
T KOG0664|consen 137 ELMQS-DLHKIIV--SPQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWD 207 (449)
T ss_pred HHHHh-hhhheec--cCCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccc
Confidence 99976 8988885 344577777888899999999999999 99999999999999999999999999999754
|
|
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.9e-19 Score=177.27 Aligned_cols=146 Identities=16% Similarity=0.138 Sum_probs=128.0
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+.+.||++...+.+.+|+|++.. ...+.+....|.+|+..|.++ .|.+||+|++|-..++ ..||||||-
T Consensus 367 k~iG~GGSSkV~kV~~s~~~iyalkkv~~--~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~--~lYmvmE~G 442 (677)
T KOG0596|consen 367 KQIGSGGSSKVFKVLNSDKQIYALKKVVL--LEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDG--YLYMVMECG 442 (677)
T ss_pred HhhcCCCcceeeeeecCCCcchhhhHHHH--hhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCc--eEEEEeecc
Confidence 67999999999999998888999998744 334456678899999999999 6999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSSI 519 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~~~ 519 (521)
+. +|..+|..+.....+| .+..+..|+..++.++|+. +|||.||||.|+|+-+ |.+||+|||+|+-+.+..
T Consensus 443 d~-DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DT 513 (677)
T KOG0596|consen 443 DI-DLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLVK-GRLKLIDFGIANAIQPDT 513 (677)
T ss_pred cc-cHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEEe-eeEEeeeechhcccCccc
Confidence 76 9999998766655667 6778999999999999999 9999999999999865 789999999999876543
|
|
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.4e-18 Score=172.04 Aligned_cols=146 Identities=10% Similarity=0.091 Sum_probs=106.1
Q ss_pred chhCcCCCeeEEEEEeCCC----CEEEEEEeeeeccccchh-------hHHHHHHHHHHHhccCCCCccceeeEEecCCC
Q 009965 364 NIIGSSPDSLVYKGTMKGG----PEIAVISLCIKEEHWTGY-------LELYFQREVADLARINHENTGKLLGYCRESSP 432 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~----~~vavk~~~~~~~~~~~~-------~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 432 (521)
++||+|+||.||+|...++ ..+|+|............ .......+...+..++|+|++++++++.....
T Consensus 18 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~ 97 (294)
T PHA02882 18 KLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCGSFKRC 97 (294)
T ss_pred eEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEeeeEecC
Confidence 7899999999999998643 455555432221110000 01122344455667899999999997754331
Q ss_pred --CceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCc
Q 009965 433 --FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLC 510 (521)
Q Consensus 433 --~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfG 510 (521)
...++++|++.. ++.+.+... ...++..+..|+.|+++||+|||+. +|+||||||+|||+++++.++|+|||
T Consensus 98 ~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~~~~l~DFG 171 (294)
T PHA02882 98 RMYYRFILLEKLVE-NTKEIFKRI--KCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNNRGYIIDYG 171 (294)
T ss_pred CceEEEEEEehhcc-CHHHHHHhh--ccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCcEEEEEcC
Confidence 134677887754 666666432 2357888999999999999999998 99999999999999999999999999
Q ss_pred hhhhc
Q 009965 511 LSFLL 515 (521)
Q Consensus 511 la~~~ 515 (521)
+|+.+
T Consensus 172 la~~~ 176 (294)
T PHA02882 172 IASHF 176 (294)
T ss_pred Cceee
Confidence 99865
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.8e-18 Score=160.69 Aligned_cols=137 Identities=13% Similarity=0.147 Sum_probs=104.0
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-----CCCCccceeeEEecCCC-Cc-eE
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-----NHENTGKLLGYCRESSP-FT-RM 436 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~H~niv~l~g~~~~~~~-~~-~~ 436 (521)
..||+|+||.||+ .++....+||++..... ...+.+.+|+.++..+ .||||++++|++.++.+ .. ..
T Consensus 8 ~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~----~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 8 SPLGTGRHRKCYA--HPEDAQRCIKIVYHRGD----GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred ceecCCCceEEEE--CCCCcCeEEEEEecccc----chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 6899999999996 54333346887744321 1345789999999999 57999999999987642 12 33
Q ss_pred EEEec--CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHH-HHHhcCCCCCeEecCCCCCCeeecC----CCCeeeCC-
Q 009965 437 LVFDY--ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGL-KYLHTELGPPFTISELNSSAVYLTE----DFSPKVSP- 508 (521)
Q Consensus 437 lv~ey--~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL-~yLH~~~~~~ivH~Dlk~~NiLld~----~~~~kl~D- 508 (521)
+|+|| +++|+|.+++... .+++. ..++.++..++ +|||+. +|+||||||+|||++. +..++|+|
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred EEecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 78999 5589999999642 25555 35677888777 999999 9999999999999974 34799999
Q ss_pred Cchhhh
Q 009965 509 LCLSFL 514 (521)
Q Consensus 509 fGla~~ 514 (521)
||...+
T Consensus 154 ~G~~~~ 159 (210)
T PRK10345 154 IGESTF 159 (210)
T ss_pred CCCcce
Confidence 555444
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.6e-18 Score=161.19 Aligned_cols=146 Identities=24% Similarity=0.303 Sum_probs=127.1
Q ss_pred hchhCcCCCeeEEEEEeCC-CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEec
Q 009965 363 SNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
.+.||+|++|.||++...+ +..+++|.+...... ...+.+.+|++.+.+++|+|++++++++.... ..++++||
T Consensus 4 ~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~--~~~~v~e~ 78 (225)
T smart00221 4 GKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE---KQREEFLREIRILKKLKHPNIVKLYGVFEDPE--PLYLVMEY 78 (225)
T ss_pred eeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch---HHHHHHHHHHHHHHhCCCCChhhheeeeecCC--ceEEEEec
Confidence 3679999999999999975 889999998543221 23567899999999999999999999998776 78999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
+++++|.+++..... .+++.....++.+++.++.|||+. +++|+|++|+||+++.++.++|+|||.+..+..
T Consensus 79 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~ 150 (225)
T smart00221 79 CEGGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHR 150 (225)
T ss_pred cCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecC
Confidence 999999999964332 278999999999999999999998 999999999999999999999999999887654
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.8e-18 Score=157.29 Aligned_cols=143 Identities=27% Similarity=0.387 Sum_probs=124.7
Q ss_pred hCcCCCeeEEEEEeCC-CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCCC
Q 009965 366 IGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASN 444 (521)
Q Consensus 366 ig~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~~ 444 (521)
||+|.+|.||+++..+ ++.+++|.+....... ..+.+.+|+..+..++|++++++++++.... ..++++||+++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~---~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~--~~~~~~e~~~~ 75 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS---LLEELLREIEILKKLNHPNIVKLYGVFEDEN--HLYLVMEYCEG 75 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh---HHHHHHHHHHHHHhcCCCCeeeEeeeeecCC--eEEEEEecCCC
Confidence 6899999999999974 8899999985433211 3467999999999999999999999998765 78999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC-CCCeeeCCCchhhhccc
Q 009965 445 GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-DFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 445 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~-~~~~kl~DfGla~~~~~ 517 (521)
++|.+++.... ..+++..+..++.+++++++|||+. +++|+||+|.||++++ +..++|+|||.+.....
T Consensus 76 ~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~ 145 (215)
T cd00180 76 GSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTS 145 (215)
T ss_pred CcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccC
Confidence 99999986432 3589999999999999999999999 9999999999999999 89999999999886543
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.77 E-value=7.4e-19 Score=177.29 Aligned_cols=144 Identities=14% Similarity=0.069 Sum_probs=120.3
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+-||-|+||+|..++-- +...+|+|.+.++.-. .+........|-.||+..+.+-||+|+--|.+.+ ..|.||||+
T Consensus 635 k~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl-~rnQvaHVKAERDILAEADn~WVVrLyySFQDkd--nLYFVMdYI 711 (1034)
T KOG0608|consen 635 KTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVL-MRNQVAHVKAERDILAEADNEWVVRLYYSFQDKD--NLYFVMDYI 711 (1034)
T ss_pred eeecccccceeEEEeecchhhHHHHhhhHHHHHH-hhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCC--ceEEEEecc
Confidence 56999999999998654 5667899988554321 1222345788999999999999999999898877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
++|++-.+|.+.+ -+.+.....++.++.-|+++.|.. ++|||||||.|||||.||.+||.||||+.-+
T Consensus 712 PGGDmMSLLIrmg--IFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGf 779 (1034)
T KOG0608|consen 712 PGGDMMSLLIRMG--IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGF 779 (1034)
T ss_pred CCccHHHHHHHhc--cCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccccccc
Confidence 9999999986444 367777777788899999999999 9999999999999999999999999998643
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.6e-18 Score=185.52 Aligned_cols=150 Identities=34% Similarity=0.602 Sum_probs=129.6
Q ss_pred CchhHHHHHHHHHHhcccCCCCCCCCCCCCCCCCC-----CccceeeCCC--C--CCEEEEEecCCCCCccCCccccCCC
Q 009965 24 FATNEFWALTTFKEAIYEDPHLVLSNWNALDADPC-----HWTGIACSDA--R--DRVLKINISGSSLKGFLAPELGLLT 94 (521)
Q Consensus 24 ~~~~~~~~L~~~k~~~~~~~~~~l~~W~~~~~~~c-----~w~gv~C~~~--~--~~l~~L~L~~n~l~~~~p~~l~~l~ 94 (521)
..+.|..||+++|+.+. ++. ..+|+. +|| .|.||.|... . ..|+.|+|++|.++|.+|+.++.++
T Consensus 369 t~~~~~~aL~~~k~~~~-~~~--~~~W~g---~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~ 442 (623)
T PLN03150 369 TLLEEVSALQTLKSSLG-LPL--RFGWNG---DPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLR 442 (623)
T ss_pred cCchHHHHHHHHHHhcC-Ccc--cCCCCC---CCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCC
Confidence 56679999999999985 432 247963 456 6999999521 1 2489999999999999999999999
Q ss_pred CCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecccccCcccCchhhhCC-CCCCEEeC
Q 009965 95 YLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNL-ISLEELHL 173 (521)
Q Consensus 95 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l-~~L~~L~L 173 (521)
+|+.|+|++|+++|.+|..++.+++|+.|||++|+++|.+|+.+++|++|+.|+|++|+++|.+|..++.+ .++..+++
T Consensus 443 ~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~ 522 (623)
T PLN03150 443 HLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNF 522 (623)
T ss_pred CCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999998864 46778888
Q ss_pred CCCCCC
Q 009965 174 DRNRLQ 179 (521)
Q Consensus 174 s~N~l~ 179 (521)
.+|...
T Consensus 523 ~~N~~l 528 (623)
T PLN03150 523 TDNAGL 528 (623)
T ss_pred cCCccc
Confidence 888654
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.2e-18 Score=159.92 Aligned_cols=140 Identities=14% Similarity=0.157 Sum_probs=114.2
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeecccc----chhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHW----TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|++|.||+|.. +|..+++|....+.... .......+.+|++++..++|+++.....++.... ..+++|
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~--~~~lv~ 78 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPE--NFIIVM 78 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCC--CCEEEE
Confidence 4689999999999988 56678888764322111 1112346889999999999999988887776655 679999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
||+++++|.+++... .+ .+..++.+++.+|+++|+. +++|||++|.|||++ ++.++|+|||.++...
T Consensus 79 e~~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~~~ 145 (211)
T PRK14879 79 EYIEGEPLKDLINSN-----GM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEFSK 145 (211)
T ss_pred EEeCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccCCC
Confidence 999999999998532 22 8899999999999999998 999999999999999 7899999999988643
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.4e-18 Score=160.36 Aligned_cols=142 Identities=15% Similarity=0.184 Sum_probs=109.1
Q ss_pred chhCcCCCeeEEEEE--eCCCCEEEEEEeeeeccccc--------------------hhhHHHHHHHHHHHhccCCCC--
Q 009965 364 NIIGSSPDSLVYKGT--MKGGPEIAVISLCIKEEHWT--------------------GYLELYFQREVADLARINHEN-- 419 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~--~~~~~~vavk~~~~~~~~~~--------------------~~~~~~~~~E~~~l~~l~H~n-- 419 (521)
+.||+|++|.||+|+ ..+|+.||+|.+........ ......+.+|++.+.++.+..
T Consensus 34 ~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~~i~ 113 (237)
T smart00090 34 GCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEAGVP 113 (237)
T ss_pred CeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 789999999999998 45899999999864321100 011234678999999997633
Q ss_pred ccceeeEEecCCCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC-eEecCCCCCCeee
Q 009965 420 TGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP-FTISELNSSAVYL 498 (521)
Q Consensus 420 iv~l~g~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-ivH~Dlk~~NiLl 498 (521)
+.+++++ . ..++||||++++++..+..... .++..+...++.+++.+++|||+. + ++|||+||+||++
T Consensus 114 ~p~~~~~---~---~~~lV~E~~~g~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp~NIli 182 (237)
T smart00090 114 VPKPIAW---R---RNVLVMEFIGGDGLPAPRLKDV--EPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSEYNILV 182 (237)
T ss_pred CCeeeEe---c---CceEEEEEecCCcccccccccC--CcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCChhhEEE
Confidence 3344432 2 3589999999988877653222 355666789999999999999998 8 9999999999999
Q ss_pred cCCCCeeeCCCchhhhccc
Q 009965 499 TEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 499 d~~~~~kl~DfGla~~~~~ 517 (521)
+ +++++|+|||.++..+.
T Consensus 183 ~-~~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 183 H-DGKVVIIDVSQSVELDH 200 (237)
T ss_pred E-CCCEEEEEChhhhccCC
Confidence 9 88999999999987654
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.1e-18 Score=184.19 Aligned_cols=147 Identities=16% Similarity=0.117 Sum_probs=100.3
Q ss_pred Hhhhh--chhCcCCCeeEEEEEeC-C----CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEe---
Q 009965 359 CEDFS--NIIGSSPDSLVYKGTMK-G----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCR--- 428 (521)
Q Consensus 359 ~~~~~--~~ig~G~~g~Vy~~~~~-~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~--- 428 (521)
.++|. +.||+|+||.||+|++. + +..||+|++..... .+.+..| .+.+..+.+++.+...+.
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~------~e~~~~e--~l~~~~~~~~~~~~~~~~~~~ 202 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA------VEIWMNE--RVRRACPNSCADFVYGFLEPV 202 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch------hHHHHHH--HHHhhchhhHHHHHHhhhccc
Confidence 34454 89999999999999986 4 68999998642211 1111111 122222333333222211
Q ss_pred -cCCCCceEEEEecCCCCChhhhhccCCCC------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEec
Q 009965 429 -ESSPFTRMLVFDYASNGTLYEHLHYGERC------------------QVSWTRRMKIVIGIARGLKYLHTELGPPFTIS 489 (521)
Q Consensus 429 -~~~~~~~~lv~ey~~~gsL~~~l~~~~~~------------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~ 489 (521)
.......++||||+++|+|.++++..... ...+..+..|+.|++.||+|||+. +|+||
T Consensus 203 ~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHR 279 (566)
T PLN03225 203 SSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHR 279 (566)
T ss_pred ccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeC
Confidence 01122789999999999999998643210 012234567999999999999998 99999
Q ss_pred CCCCCCeeecC-CCCeeeCCCchhhhcc
Q 009965 490 ELNSSAVYLTE-DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 490 Dlk~~NiLld~-~~~~kl~DfGla~~~~ 516 (521)
||||+|||+++ ++.+||+|||+|+.+.
T Consensus 280 DLKP~NILl~~~~~~~KL~DFGlA~~l~ 307 (566)
T PLN03225 280 DVKPQNIIFSEGSGSFKIIDLGAAADLR 307 (566)
T ss_pred cCCHHHEEEeCCCCcEEEEeCCCccccc
Confidence 99999999986 5899999999998653
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.8e-18 Score=160.88 Aligned_cols=138 Identities=22% Similarity=0.273 Sum_probs=121.0
Q ss_pred CCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCCCCChh
Q 009965 370 PDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLY 448 (521)
Q Consensus 370 ~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~~gsL~ 448 (521)
+||.||+|+.. ++..+++|++...... ...+.+.+|++.+++++|+|++++++++.... ..++++||+++++|.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~--~~~l~~e~~~~~~L~ 75 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIK---KKRERILREISILKKLKHPNIVRLYDVFEDED--KLYLVMEYCDGGDLF 75 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccc---cHHHHHHHHHHHHHhCCCCcHHHHHhheeeCC--EEEEEEeCCCCCCHH
Confidence 58999999997 4889999998544322 11468999999999999999999999998776 789999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 449 EHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 449 ~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
+++..... +++..+..++.+++++++|||+. +++|+||+|+||++++++.++|+|||.+.....
T Consensus 76 ~~~~~~~~--~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~ 139 (244)
T smart00220 76 DLLKKRGR--LSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDP 139 (244)
T ss_pred HHHHhccC--CCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecc
Confidence 99864332 89999999999999999999998 999999999999999999999999999887654
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.74 E-value=7.1e-18 Score=180.16 Aligned_cols=137 Identities=15% Similarity=0.128 Sum_probs=110.5
Q ss_pred hchhCcCCCeeEEEEEeCCCCEEEEEEeeeeccc----cchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEE
Q 009965 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEH----WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~----~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
.+.||+|+||+||+|.+.+.. +++|+...+... ......+++.+|++++..++|++++....++.... ..++|
T Consensus 338 ~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~--~~~lv 414 (535)
T PRK09605 338 DHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE--EKTIV 414 (535)
T ss_pred cceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC--CCEEE
Confidence 378999999999999886554 444433222111 11122356899999999999999998888877655 67899
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|||+++++|.+++. .+.+++.+++++|.|||+. +++|||+||+|||+ +++.++|+|||+++..+
T Consensus 415 ~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla~~~~ 478 (535)
T PRK09605 415 MEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLGKYSD 478 (535)
T ss_pred EEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCcccccCC
Confidence 99999999999874 4578999999999999998 99999999999999 57899999999998754
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.74 E-value=1e-17 Score=155.88 Aligned_cols=136 Identities=15% Similarity=0.197 Sum_probs=108.0
Q ss_pred hhCcCCCeeEEEEEeCCCCEEEEEEeeeecccc----chhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEe
Q 009965 365 IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHW----TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 365 ~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
.||+|++|.||+|.+ ++..+++|....+.... ......++.+|++++..++|+++.....++...+ ..++|||
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~--~~~lv~e 77 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPD--NKTIVME 77 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC--CCEEEEE
Confidence 489999999999986 55779998864332111 1112356789999999999988766655555544 5789999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|+++++|.+++.... . .++.+++++|+++|+. +++|||++|.||+++ ++.+++.|||+++...
T Consensus 78 ~~~g~~l~~~~~~~~---~------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~~ 140 (199)
T TIGR03724 78 YIEGKPLKDVIEEGN---D------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKYSD 140 (199)
T ss_pred EECCccHHHHHhhcH---H------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcCCC
Confidence 999999999874321 0 7899999999999999 999999999999999 7899999999988754
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.3e-19 Score=174.44 Aligned_cols=157 Identities=13% Similarity=0.064 Sum_probs=131.5
Q ss_pred ccCHHHHHHHHhhhhchhCcCCCeeEEEEEeCCCC-EEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEE
Q 009965 349 RFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGP-EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYC 427 (521)
Q Consensus 349 ~~~~~~l~~~~~~~~~~ig~G~~g~Vy~~~~~~~~-~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~ 427 (521)
...++|+.+. ..+|-|+||.|-.+...... .+|+|.++++. ..+....+.+..|-.+|...+.|.||+++..|
T Consensus 416 ~v~l~dl~~i-----aTLGvGgFGRVELV~~~~~~~~fAlKilkK~h-IVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTf 489 (732)
T KOG0614|consen 416 QVKLSDLKRI-----ATLGVGGFGRVELVKVNSQKATFALKILKKKH-IVDTKQQEHVFSERNIMMECRSDFIVRLYRTF 489 (732)
T ss_pred ccchhhhhhh-----hhcccCccceEEEEEecccchHHHHHHHhHhh-ccchhHHHHHHhHHHHHHhcCchHHHHHHHHh
Confidence 3445555544 35999999999999887543 48888875443 22223345678899999999999999999999
Q ss_pred ecCCCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeC
Q 009965 428 RESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVS 507 (521)
Q Consensus 428 ~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~ 507 (521)
.++. +.|+.||-|-+|.++..|+.++ .++..+..-++..|.+|++|||+. +||.|||||+|.++|.+|.+||.
T Consensus 490 rd~k--yvYmLmEaClGGElWTiLrdRg--~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLV 562 (732)
T KOG0614|consen 490 RDSK--YVYMLMEACLGGELWTILRDRG--SFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLV 562 (732)
T ss_pred ccch--hhhhhHHhhcCchhhhhhhhcC--CcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEe
Confidence 9888 8999999999999999997554 488899999999999999999999 99999999999999999999999
Q ss_pred CCchhhhcccc
Q 009965 508 PLCLSFLLVSS 518 (521)
Q Consensus 508 DfGla~~~~~~ 518 (521)
|||+|+.+..+
T Consensus 563 DFGFAKki~~g 573 (732)
T KOG0614|consen 563 DFGFAKKIGSG 573 (732)
T ss_pred ehhhHHHhccC
Confidence 99999998764
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.1e-18 Score=179.70 Aligned_cols=140 Identities=21% Similarity=0.278 Sum_probs=111.2
Q ss_pred chhCcCCCee-EEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSL-VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~-Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+++|.|+.|+ ||+|.+ +|++||||++... ...-..+|+..|+.- +|||||++++.-.+.. +.||..|.
T Consensus 515 eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e-------~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~q--F~YIalEL 584 (903)
T KOG1027|consen 515 EILGYGSNGTVVFRGVY-EGREVAVKRLLEE-------FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQ--FLYIALEL 584 (903)
T ss_pred HHcccCCCCcEEEEEee-CCceehHHHHhhH-------hHHHHHHHHHHHHhccCCCceEEEEeeccCCc--eEEEEehH
Confidence 7899999875 899999 4579999998432 223457899999888 7999999987766655 89999999
Q ss_pred CCCCChhhhhccC-CCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC-----CCCeeeCCCchhhh
Q 009965 442 ASNGTLYEHLHYG-ERC-QVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-----DFSPKVSPLCLSFL 514 (521)
Q Consensus 442 ~~~gsL~~~l~~~-~~~-~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~-----~~~~kl~DfGla~~ 514 (521)
|.. +|++++... ... ...-.....+..|++.||++||+. +||||||||.||||+. ..+|+|+|||+++.
T Consensus 585 C~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKk 660 (903)
T KOG1027|consen 585 CAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKK 660 (903)
T ss_pred hhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccccc
Confidence 976 999999642 110 111133467789999999999997 9999999999999975 35799999999998
Q ss_pred ccc
Q 009965 515 LVS 517 (521)
Q Consensus 515 ~~~ 517 (521)
+..
T Consensus 661 l~~ 663 (903)
T KOG1027|consen 661 LAG 663 (903)
T ss_pred cCC
Confidence 764
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-17 Score=155.03 Aligned_cols=138 Identities=16% Similarity=0.138 Sum_probs=107.1
Q ss_pred hchhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccc------------------hhhHHHHHHHHHHHhccCCCC--ccc
Q 009965 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWT------------------GYLELYFQREVADLARINHEN--TGK 422 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~------------------~~~~~~~~~E~~~l~~l~H~n--iv~ 422 (521)
.+.||+|+||.||++..++|+.||||++........ ......+..|..++.++.|++ +.+
T Consensus 20 ~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~v~~ 99 (198)
T cd05144 20 GNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFPVPK 99 (198)
T ss_pred CCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCCCCc
Confidence 478999999999999988899999998753221100 011234678999999998874 444
Q ss_pred eeeEEecCCCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCC
Q 009965 423 LLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF 502 (521)
Q Consensus 423 l~g~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~ 502 (521)
.++. . ..++||||+++++|.+.... ....+++.+++.++.++|+. +++||||||+||++++++
T Consensus 100 ~~~~----~--~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p~Nill~~~~ 162 (198)
T cd05144 100 PIDW----N--RHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKH---GIIHGDLSEFNILVDDDE 162 (198)
T ss_pred eeec----C--CceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHC---CCCcCCCCcccEEEcCCC
Confidence 4432 2 46899999999999775421 23457889999999999998 999999999999999999
Q ss_pred CeeeCCCchhhhccc
Q 009965 503 SPKVSPLCLSFLLVS 517 (521)
Q Consensus 503 ~~kl~DfGla~~~~~ 517 (521)
.++|+|||++.-.+.
T Consensus 163 ~~~liDfg~~~~~~~ 177 (198)
T cd05144 163 KIYIIDWPQMVSTDH 177 (198)
T ss_pred cEEEEECCccccCCC
Confidence 999999999975543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.3e-18 Score=154.62 Aligned_cols=140 Identities=11% Similarity=0.189 Sum_probs=115.3
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEE-ecCCCCceEEEEe
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYC-RESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~-~~~~~~~~~lv~e 440 (521)
+.+|+|.||.+-.++++ ..+.+++|-+.... ...++|.+|...--.+ .|.||+.-++.. ...+ ..+.++|
T Consensus 30 k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-----tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d--~YvF~qE 102 (378)
T KOG1345|consen 30 KQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-----TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSD--AYVFVQE 102 (378)
T ss_pred HHhcccceeeEEeeeccCCceEEEeeccCcch-----hhHHHHHHHhccceeeccchhhhHHHHHHhhcCc--eEEEeec
Confidence 78999999999999997 56788998874332 2346899999876666 689999877654 3444 6788999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee-c-CCCCeeeCCCchhhhcc
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL-T-EDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLl-d-~~~~~kl~DfGla~~~~ 516 (521)
|+|.|+|.+-+.. ..+.+....+++.|++.|+.|||+. .+||||||.+|||| + +..++||||||+.+-.+
T Consensus 103 ~aP~gdL~snv~~---~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g 174 (378)
T KOG1345|consen 103 FAPRGDLRSNVEA---AGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTRKVG 174 (378)
T ss_pred cCccchhhhhcCc---ccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecccccccC
Confidence 9999999988743 3488889999999999999999999 99999999999998 3 44589999999987654
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2e-17 Score=150.90 Aligned_cols=133 Identities=19% Similarity=0.176 Sum_probs=103.3
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccch-hhHHHHHHHHHHHhccC-CCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTG-YLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~-~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
..+++|+||+||.+.- ++..++.+.+... ..+.. -....|.+|+++|.+++ |+++.+++++ + ..+++|||
T Consensus 8 ~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~-~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~--~~~lvmey 79 (218)
T PRK12274 8 EPLKSDTFGRILLVRG-GERKFVRRDLSAA-PWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----D--GRHLDRSY 79 (218)
T ss_pred eeecCCCcceEEEeec-CCceeeecccccc-hhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----c--CEEEEEee
Confidence 5799999999997755 5666776665322 11111 12235889999999995 5889999886 2 46999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCC-CCCCeeecCCCCeeeCCCchhhhcc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISEL-NSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dl-k~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+++.+|.+.+.. ....+..+++++|.|+|+. +|+|||| ||+|||+++++.++|+|||+|....
T Consensus 80 I~G~~L~~~~~~---------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~ 143 (218)
T PRK12274 80 LAGAAMYQRPPR---------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGN 143 (218)
T ss_pred ecCccHHhhhhh---------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecC
Confidence 999888765421 1135778999999999999 9999999 7999999999999999999998554
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.73 E-value=8.6e-19 Score=178.18 Aligned_cols=144 Identities=21% Similarity=0.252 Sum_probs=125.5
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
..+|.|.||.|||++.. .+...|+|.++....+ .-+-...|+-++...+|||||.++|-|.... ..++.|||+
T Consensus 21 qrvgsgTygdvyKaRd~~s~elaavkvVkLep~d----d~~~iqqei~~~~dc~h~nivay~gsylr~d--klwicMEyc 94 (829)
T KOG0576|consen 21 QRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGD----DFSGIQQEIGMLRDCRHPNIVAYFGSYLRRD--KLWICMEYC 94 (829)
T ss_pred eeecCCcccchhhhcccccCchhhheeeeccCCc----cccccccceeeeecCCCcChHHHHhhhhhhc--CcEEEEEec
Confidence 68999999999999986 7888999988544321 2234678999999999999999999998777 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~~ 518 (521)
.+|+|++.-+-. .++++.++...++...+|++|||+. +-+|||||-.|||+++.+.+|++|||.+-.+..+
T Consensus 95 gggslQdiy~~T--gplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqitat 165 (829)
T KOG0576|consen 95 GGGSLQDIYHVT--GPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITAT 165 (829)
T ss_pred CCCcccceeeec--ccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhhh
Confidence 999999987633 3689999999999999999999999 9999999999999999999999999998776544
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.2e-18 Score=163.02 Aligned_cols=146 Identities=17% Similarity=0.093 Sum_probs=120.2
Q ss_pred hhhchhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEE
Q 009965 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 361 ~~~~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+|-.+||+|+||.|..+.-+ +...+|||++...--.++. ..+--+.|-++|+-- +-|-++++...+..-+ ..|.|
T Consensus 352 nFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdD-Dvectm~EKrvLAL~~kppFL~qlHScFQTmD--RLyFV 428 (683)
T KOG0696|consen 352 NFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDD-DVECTMVEKRVLALPGKPPFLVQLHSCFQTMD--RLYFV 428 (683)
T ss_pred ceEEEeccCccceeeeecccCcchhhhhhhhccceeeecC-cccceehhhhheecCCCCchHHHHHHHhhhhh--heeeE
Confidence 44589999999999999877 4567999998543321111 122346677777766 6788999999888776 79999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
|||+.+|+|--.++.-+ .+.++..+-+|..||-||-|||+. +|+.||||..|||+|.+|.+||+|||+.+.
T Consensus 429 MEyvnGGDLMyhiQQ~G--kFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKE 499 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQVG--KFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 499 (683)
T ss_pred EEEecCchhhhHHHHhc--ccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeecccccc
Confidence 99999999998886443 377888899999999999999999 999999999999999999999999999885
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.8e-16 Score=147.82 Aligned_cols=137 Identities=11% Similarity=0.115 Sum_probs=108.3
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHH------HHHHHHHHHhccCCCCccceeeEEecCC------
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLEL------YFQREVADLARINHENTGKLLGYCRESS------ 431 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~------~~~~E~~~l~~l~H~niv~l~g~~~~~~------ 431 (521)
+++|.|+||.||.... ++..+|+|.+..+.... ....+ .+.+|+..+.+++|++|..+..++....
T Consensus 37 ~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~-~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~ 114 (232)
T PRK10359 37 KVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRT-ERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLRY 114 (232)
T ss_pred EEecCCCceEEEEEec-CCCcEEEEEechhcCch-HHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecccccccc
Confidence 7899999999999755 56689999985443221 12212 2689999999999999999998865332
Q ss_pred CCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCch
Q 009965 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCL 511 (521)
Q Consensus 432 ~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGl 511 (521)
....+|||||+++.+|.++.. ++. ....++++++..+|+. +++|||+||+||++++++ ++|+|||.
T Consensus 115 ~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g-i~liDfg~ 180 (232)
T PRK10359 115 AHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG-LRIIDLSG 180 (232)
T ss_pred cCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC-EEEEECCC
Confidence 114789999999999988742 222 3456999999999999 999999999999999988 99999998
Q ss_pred hhhcc
Q 009965 512 SFLLV 516 (521)
Q Consensus 512 a~~~~ 516 (521)
.+...
T Consensus 181 ~~~~~ 185 (232)
T PRK10359 181 KRCTA 185 (232)
T ss_pred ccccc
Confidence 77653
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.68 E-value=5.3e-17 Score=165.59 Aligned_cols=139 Identities=16% Similarity=0.149 Sum_probs=117.0
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
..+|.|+|+.|-++... +++..+||++..... +-.+|+.++... +||||+++.+.+.+.. +.|+|||+
T Consensus 328 ~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~--------~~~~e~~~~~~~~~h~niv~~~~v~~~~~--~~~~v~e~ 397 (612)
T KOG0603|consen 328 EELGEGSFSAVKYCESSPTDQEPAVKIISKRAD--------DNQDEIPISLLVRDHPNIVKSHDVYEDGK--EIYLVMEL 397 (612)
T ss_pred cccCCCCccceeeeeccccccchhheecccccc--------ccccccchhhhhcCCCcceeecceecCCc--eeeeeehh
Confidence 56999999999999886 688899999854321 234577666666 7999999999999887 89999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee-cCCCCeeeCCCchhhhcccc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL-TEDFSPKVSPLCLSFLLVSS 518 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLl-d~~~~~kl~DfGla~~~~~~ 518 (521)
+.+|-+.+.+..... .. ..+..|+.+++.|+.|||++ ++|||||||+|||+ ++.++++|+|||.++.+.+.
T Consensus 398 l~g~ell~ri~~~~~--~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 398 LDGGELLRRIRSKPE--FC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred ccccHHHHHHHhcch--hH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 999988887754332 23 67788999999999999998 99999999999999 68999999999999987654
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.67 E-value=1e-16 Score=155.92 Aligned_cols=135 Identities=19% Similarity=0.187 Sum_probs=118.4
Q ss_pred chhCcCCCeeEEEEEeCC----CCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEE
Q 009965 364 NIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv 438 (521)
++||.|.|++||++.+.. .+.||+|.+..... ..+..+|+++|..+ .+.||+++.+++...+ +..+|
T Consensus 42 ~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~------p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd--~v~iv 113 (418)
T KOG1167|consen 42 NKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS------PSRILNELEMLYRLGGSDNIIKLNGCFRNND--QVAIV 113 (418)
T ss_pred ccccccchhhhhhhhHhhhccccceEeeeecccccC------chHHHHHHHHHHHhccchhhhcchhhhccCC--eeEEE
Confidence 789999999999998743 57899999855432 24689999999999 6999999999998777 89999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC-CCCeeeCCCchhhh
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-DFSPKVSPLCLSFL 514 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~-~~~~kl~DfGla~~ 514 (521)
+||+++-+..++.. .++.+....+.....+||+|+|.. +||||||||+|+|.+. .+.-.|.|||||..
T Consensus 114 lp~~~H~~f~~l~~-----~l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~ 182 (418)
T KOG1167|consen 114 LPYFEHDRFRDLYR-----SLSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDFGLAQR 182 (418)
T ss_pred ecccCccCHHHHHh-----cCCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEechhHHH
Confidence 99999999999885 367888999999999999999999 9999999999999985 56789999999974
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.5e-16 Score=155.27 Aligned_cols=129 Identities=18% Similarity=0.179 Sum_probs=108.9
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-----C---CCccceeeEEecCC--C
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-----H---ENTGKLLGYCRESS--P 432 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----H---~niv~l~g~~~~~~--~ 432 (521)
.+||-|.|++||.+... +.+.||+|+.+. . ....+..+.||++|++++ | ..||+|+++|.... +
T Consensus 84 rKLGWGHFSTVWLawDtq~~r~VAlKVvKS--A---qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG 158 (590)
T KOG1290|consen 84 RKLGWGHFSTVWLAWDTQNKRYVALKVVKS--A---QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNG 158 (590)
T ss_pred EeccccccceeEEEeeccCCeEEEEEEEeh--h---hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCC
Confidence 78999999999999885 678999998732 2 234566789999999883 3 46999999997543 3
Q ss_pred CceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC
Q 009965 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE 500 (521)
Q Consensus 433 ~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~ 500 (521)
.+.+||+|++.. +|..+|....-+.++...+.+|+.||+.||.|||.+| +|||-||||+|||+..
T Consensus 159 ~HVCMVfEvLGd-nLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~~ 223 (590)
T KOG1290|consen 159 QHVCMVFEVLGD-NLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLCS 223 (590)
T ss_pred cEEEEEehhhhh-HHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeeec
Confidence 478999999965 9999998666567999999999999999999999998 9999999999999954
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.8e-18 Score=148.31 Aligned_cols=156 Identities=26% Similarity=0.453 Sum_probs=132.7
Q ss_pred CCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceee
Q 009965 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
..+++.|.||+|.++. +|+.+..|.+|+.|++++|+++ .+|.+++.|++|+.|+++-|++. .+|..|+.++.|+.||
T Consensus 32 ~s~ITrLtLSHNKl~~-vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levld 108 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLTV-VPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLD 108 (264)
T ss_pred hhhhhhhhcccCceee-cCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhh
Confidence 3578889999999986 7788999999999999999998 68889999999999999999998 8999999999999999
Q ss_pred cccccCc-ccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcccCCCCCCEEeccCCccccCC
Q 009965 149 LQSNGLT-GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSI 227 (521)
Q Consensus 149 Ls~N~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~i 227 (521)
|++|+++ ..+|..|..++.|+.|+|+.|.|. .+|.. +..+++|+.|.+.+|.+- ++
T Consensus 109 ltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~d---------------------vg~lt~lqil~lrdndll-~l 165 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPD---------------------VGKLTNLQILSLRDNDLL-SL 165 (264)
T ss_pred ccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChh---------------------hhhhcceeEEeeccCchh-hC
Confidence 9999987 468889999999999999999997 55542 345778999999999887 78
Q ss_pred cccccc---CCCcccCCCcCCCCCCc
Q 009965 228 PKCLEY---LPSTSFQGNCLQNKDPK 250 (521)
Q Consensus 228 p~~l~~---l~~l~~~~N~l~~~~~~ 250 (521)
|..++. +.++.++||.++-+.|.
T Consensus 166 pkeig~lt~lrelhiqgnrl~vlppe 191 (264)
T KOG0617|consen 166 PKEIGDLTRLRELHIQGNRLTVLPPE 191 (264)
T ss_pred cHHHHHHHHHHHHhcccceeeecChh
Confidence 877654 56788999988876654
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.9e-16 Score=152.12 Aligned_cols=149 Identities=15% Similarity=0.161 Sum_probs=122.3
Q ss_pred chhCcCCCeeEEEEEeCC------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEE
Q 009965 364 NIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
.++.+|.||.||+|.+++ .++|-||.+... .+.-....+..|-..+..+.|||+.++.+.+.++.. ..++
T Consensus 290 ~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~---AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~-~P~V 365 (563)
T KOG1024|consen 290 CLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH---ASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYA-TPFV 365 (563)
T ss_pred hhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc---ccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccC-cceE
Confidence 678999999999996653 345666655211 111223468889999999999999999999976543 6899
Q ss_pred EEecCCCCChhhhhcc------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCch
Q 009965 438 VFDYASNGTLYEHLHY------GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCL 511 (521)
Q Consensus 438 v~ey~~~gsL~~~l~~------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGl 511 (521)
+|.|+.-|+|..+|.. ...+.++-.+.+.++.|++.||+|||.. ++||.||.++|++||+...+||+|-.+
T Consensus 366 ~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd~LqVkltDsaL 442 (563)
T KOG1024|consen 366 LYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDDQLQVKLTDSAL 442 (563)
T ss_pred EEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---CcccchhhhhcceehhheeEEeccchh
Confidence 9999999999999971 2245678888999999999999999999 999999999999999999999999999
Q ss_pred hhhccccc
Q 009965 512 SFLLVSSI 519 (521)
Q Consensus 512 a~~~~~~~ 519 (521)
+|-+.++.
T Consensus 443 SRDLFP~D 450 (563)
T KOG1024|consen 443 SRDLFPGD 450 (563)
T ss_pred ccccCccc
Confidence 99877654
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.65 E-value=9e-16 Score=135.33 Aligned_cols=135 Identities=16% Similarity=0.066 Sum_probs=112.8
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCC--CCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH--ENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.+|+|.++.||++...+ ..+++|....... ...+.+|+..+..++| ..+.+++++....+ ..++++||
T Consensus 4 ~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~------~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~--~~~~v~e~ 74 (155)
T cd05120 4 KLLKGGLTNRVYLLGTKD-EDYVLKINPSREK------GADREREVAILQLLARKGLPVPKVLASGESDG--WSYLLMEW 74 (155)
T ss_pred eecccccccceEEEEecC-CeEEEEecCCCCc------hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCC--ccEEEEEe
Confidence 468999999999999866 6788988633211 3568899999999976 58999988887655 78999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++++.+..+ ++..+..++.+++++++++|.....+++|+|++|+||++++++.+++.|||.++...
T Consensus 75 ~~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~ 140 (155)
T cd05120 75 IEGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYGP 140 (155)
T ss_pred cCCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCCC
Confidence 998777654 566778899999999999998755579999999999999998999999999988654
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.4e-16 Score=150.04 Aligned_cols=143 Identities=16% Similarity=0.118 Sum_probs=121.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
.+||+|+|++|..+++. +.+.+|+|++++.--. +.........|-.+.... +||-+|-+..++...+ ..+.|.||
T Consensus 256 ~vigrgsyakvl~~~~~~t~qiyamkvvkkel~n-ddedidwvqtek~vfe~asn~pflvglhscfqtes--rlffviey 332 (593)
T KOG0695|consen 256 RVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVN-DDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTES--RLFFVIEY 332 (593)
T ss_pred eeecCcchhhhhheehcccceeeehhhHHHHhcC-CcccchhHHhhHHHHHhccCCCeEEehhhhhcccc--eEEEEEEE
Confidence 79999999999999986 6788999987433222 223345667788887777 7999999999998877 78999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
+++|+|--++++. +.+++....-+...|+-||.|||+. +||.||||..|||+|.+|.+|+.|||+.+.
T Consensus 333 v~ggdlmfhmqrq--rklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke 400 (593)
T KOG0695|consen 333 VNGGDLMFHMQRQ--RKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKE 400 (593)
T ss_pred ecCcceeeehhhh--hcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhc
Confidence 9999998777533 3488888888999999999999999 999999999999999999999999999885
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.65 E-value=7.2e-16 Score=141.86 Aligned_cols=141 Identities=13% Similarity=0.146 Sum_probs=98.6
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhh--------------------HHHHHHHHHHHhccCCCC--cc
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYL--------------------ELYFQREVADLARINHEN--TG 421 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~--------------------~~~~~~E~~~l~~l~H~n--iv 421 (521)
+.||+|+||+||+|+..+++.||||.+........... ......|...+.++.+.. +.
T Consensus 3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~ 82 (187)
T cd05119 3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPVP 82 (187)
T ss_pred cccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCCC
Confidence 57999999999999988899999998754321100000 011235666666664443 33
Q ss_pred ceeeEEecCCCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeEecCCCCCCeeecC
Q 009965 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTE 500 (521)
Q Consensus 422 ~l~g~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlk~~NiLld~ 500 (521)
+.+++ . ..++||||++++++....-.... .. ....+++.+++.++.++|. . +|+|||+||+||+++
T Consensus 83 ~~~~~----~--~~~lv~e~~~g~~~~~~~l~~~~--~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili~- 149 (187)
T cd05119 83 KPIDL----N--RHVLVMEFIGGDGIPAPRLKDVR--LL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILVD- 149 (187)
T ss_pred ceEec----C--CCEEEEEEeCCCCccChhhhhhh--hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEEE-
Confidence 44432 1 45899999999654322111110 11 5577899999999999998 6 999999999999999
Q ss_pred CCCeeeCCCchhhhccc
Q 009965 501 DFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 501 ~~~~kl~DfGla~~~~~ 517 (521)
++.++++|||.+.....
T Consensus 150 ~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 150 DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred CCcEEEEECcccccccC
Confidence 89999999999976543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.4e-16 Score=149.69 Aligned_cols=142 Identities=19% Similarity=0.178 Sum_probs=115.3
Q ss_pred hhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCC----CCceEEEE
Q 009965 365 IIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----PFTRMLVF 439 (521)
Q Consensus 365 ~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~~~~lv~ 439 (521)
.+|.|.- .|..+... .++.||+|++...... ....++..+|..++..+.|+|+++++.++.... ..+.|+||
T Consensus 24 p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n--~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~ 100 (369)
T KOG0665|consen 24 PIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQN--QTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVM 100 (369)
T ss_pred ccCCCCc-eEEecchhhccCceehhhhcCcccc--CccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHH
Confidence 4666665 45555444 5788999998655322 233456789999999999999999999986432 11579999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
|||.. +|.+.++ -.++..+...|..|++.|+.|||+. +|+||||||+||++..+..+||.|||+|+.-+.
T Consensus 101 e~m~~-nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~ 170 (369)
T KOG0665|consen 101 ELMDA-NLCQVIL----MELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLARTEDT 170 (369)
T ss_pred Hhhhh-HHHHHHH----HhcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhhcccCc
Confidence 99975 9999886 2378899999999999999999999 999999999999999999999999999986544
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.2e-15 Score=142.54 Aligned_cols=142 Identities=12% Similarity=0.031 Sum_probs=108.4
Q ss_pred chhC-cCCCeeEEEEEeCCCCEEEEEEeeeec---------cccchhhHHHHHHHHHHHhccCCCCc--cceeeEEecCC
Q 009965 364 NIIG-SSPDSLVYKGTMKGGPEIAVISLCIKE---------EHWTGYLELYFQREVADLARINHENT--GKLLGYCRESS 431 (521)
Q Consensus 364 ~~ig-~G~~g~Vy~~~~~~~~~vavk~~~~~~---------~~~~~~~~~~~~~E~~~l~~l~H~ni--v~l~g~~~~~~ 431 (521)
.+|| .|+.|+||++... +..++||++..+. ..........+.+|++++.+++|+++ ++.+++.....
T Consensus 37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 5787 8999999999885 5678998874321 01112334568899999999998885 67777754432
Q ss_pred CC--ceEEEEecCCC-CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCC
Q 009965 432 PF--TRMLVFDYASN-GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSP 508 (521)
Q Consensus 432 ~~--~~~lv~ey~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~D 508 (521)
.. ..++|+||+++ .+|.+++... +++.. .+.++++++.+||+. +|+||||||.|||++.++.++|+|
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~LID 185 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQEA---PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFWLID 185 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhcC---CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEEEEE
Confidence 11 23599999997 6999888532 24443 367899999999999 999999999999999989999999
Q ss_pred Cchhhhcc
Q 009965 509 LCLSFLLV 516 (521)
Q Consensus 509 fGla~~~~ 516 (521)
||.++...
T Consensus 186 fg~~~~~~ 193 (239)
T PRK01723 186 FDRGELRT 193 (239)
T ss_pred CCCcccCC
Confidence 99988643
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.8e-16 Score=157.82 Aligned_cols=180 Identities=22% Similarity=0.275 Sum_probs=132.4
Q ss_pred CCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceee
Q 009965 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
.++++.|+|.+|.|+..-.+++..++.|++||||.|.|+.+.-.+|..=.++++|+|++|+|+..--..|.++.+|..|.
T Consensus 124 sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlk 203 (873)
T KOG4194|consen 124 SGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLK 203 (873)
T ss_pred ccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeee
Confidence 46799999999999988888899999999999999999965556677778899999999999877777888999999999
Q ss_pred cccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcc-----------------------cccccccccccCCcC
Q 009965 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGY-----------------------TANIHGMYASSANLT 205 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~-----------------------~~~l~~l~l~~n~l~ 205 (521)
|++|+++...+..|.+|++|+.|+|..|++. .+-...+.++ ..+++.++++.|+++
T Consensus 204 LsrNrittLp~r~Fk~L~~L~~LdLnrN~ir-ive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~ 282 (873)
T KOG4194|consen 204 LSRNRITTLPQRSFKRLPKLESLDLNRNRIR-IVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQ 282 (873)
T ss_pred cccCcccccCHHHhhhcchhhhhhcccccee-eehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhh
Confidence 9999999655667778999999999999875 2211111100 123455677777765
Q ss_pred c-----ccCCCCCCEEeccCCccccCCcccc---ccCCCcccCCCcCCCCCC
Q 009965 206 G-----LCHLSQLKVADFSYNFFVGSIPKCL---EYLPSTSFQGNCLQNKDP 249 (521)
Q Consensus 206 ~-----~~~l~~L~~L~ls~N~l~g~ip~~l---~~l~~l~~~~N~l~~~~~ 249 (521)
. +-.|+.|++||||+|.+...-++.+ ++|..|+++.|.++.+++
T Consensus 283 ~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~ 334 (873)
T KOG4194|consen 283 AVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDE 334 (873)
T ss_pred hhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCCh
Confidence 4 3346677777777777765555444 445566677776666554
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.2e-15 Score=135.18 Aligned_cols=141 Identities=15% Similarity=0.167 Sum_probs=112.8
Q ss_pred chhCcCCCeeEEEEEe-CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCC-CCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTM-KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH-ENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~-~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
..||.|+||.+|.|.. .+|.+||||.=..+... .....|.++...++| ..|..+.-|..+.. .-.+|||.
T Consensus 21 rkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h------pqL~yEskvY~iL~~g~GiP~i~~y~~e~~--ynvlVMdL 92 (341)
T KOG1163|consen 21 RKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH------PQLLYESKVYRILQGGVGIPHIRHYGTEKD--YNVLVMDL 92 (341)
T ss_pred EeecCCchhheeeeeeccCCceEEEEeecccCCC------cchhHHHHHHHHhccCCCCchhhhhccccc--cceeeeec
Confidence 7899999999999976 47999999975433222 346788888888876 55666666665555 67999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC---CCCeeeCCCchhhhccc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~---~~~~kl~DfGla~~~~~ 517 (521)
+. -+|++...-.. +.++-.+.+-.|-|+..-++|+|.. ++|||||||.|+|..- ...+.++|||||+.+-+
T Consensus 93 LG-PsLEdLfnfC~-R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d 166 (341)
T KOG1163|consen 93 LG-PSLEDLFNFCS-RRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD 166 (341)
T ss_pred cC-ccHHHHHHHHh-hhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchhhhcc
Confidence 94 49998875333 2488899999999999999999999 8999999999999863 34689999999998654
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.60 E-value=9e-17 Score=161.33 Aligned_cols=177 Identities=21% Similarity=0.232 Sum_probs=139.0
Q ss_pred CEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecc
Q 009965 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
++..|+|+.|+++..-...+.+|+.|+.|+||+|.|..+-++++.-.++|++||||+|+++..-+.+|..|..|+.|+|+
T Consensus 270 kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs 349 (873)
T KOG4194|consen 270 KMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLS 349 (873)
T ss_pred ccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhccc
Confidence 57888888888888777788888889999999998888888888888889999999998887777788888888999999
Q ss_pred cccCcccCchhhhCCCCCCEEeCCCCCCCccCCCC--CCCcccccccccccccCCcCc-----ccCCCCCCEEeccCCcc
Q 009965 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG--SNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFF 223 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~--~~~~~~~~l~~l~l~~n~l~~-----~~~l~~L~~L~ls~N~l 223 (521)
+|+++..-...|..+++|+.|||++|.+++.|-+. .+.+ ...+..+.+.+|++.. +..+..|++|||.+|.+
T Consensus 350 ~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~g-l~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~Nai 428 (873)
T KOG4194|consen 350 HNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNG-LPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAI 428 (873)
T ss_pred ccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhcc-chhhhheeecCceeeecchhhhccCcccceecCCCCcc
Confidence 99888666677888899999999999988877763 2222 3567778888888865 55688899999999988
Q ss_pred ccCCccccccC--CCcccCCCcCCCCC
Q 009965 224 VGSIPKCLEYL--PSTSFQGNCLQNKD 248 (521)
Q Consensus 224 ~g~ip~~l~~l--~~l~~~~N~l~~~~ 248 (521)
...-|..|..+ ++|.++.-.+-+.|
T Consensus 429 aSIq~nAFe~m~Lk~Lv~nSssflCDC 455 (873)
T KOG4194|consen 429 ASIQPNAFEPMELKELVMNSSSFLCDC 455 (873)
T ss_pred eeecccccccchhhhhhhcccceEEec
Confidence 87778777654 44445444343333
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.8e-15 Score=145.44 Aligned_cols=142 Identities=11% Similarity=0.101 Sum_probs=118.3
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCC--C----CccceeeEEecCCCCceE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH--E----NTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H--~----niv~l~g~~~~~~~~~~~ 436 (521)
..+|+|.||.|-++..+ .+..||||++..- ...+++.+-|+++++++.+ | -+|++.+|+.-.+ +.+
T Consensus 95 ~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-----~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrg--hiC 167 (415)
T KOG0671|consen 95 DLLGEGTFGKVVECWDRETKEHVALKIIKNV-----DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRG--HIC 167 (415)
T ss_pred hhhcCCcccceEEEeecCCCceehHHHHHHH-----HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccC--ceE
Confidence 67999999999999886 5788999987322 2345667889999999932 2 2678888887666 899
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC----------------
Q 009965 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---------------- 500 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~---------------- 500 (521)
+|+|.+. -|+.+++..+.-.+++-..+..|+.|++++++|||+. +++|-||||+|||+-+
T Consensus 168 ivfellG-~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~k~~~~~~ 243 (415)
T KOG0671|consen 168 IVFELLG-LSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNPKKKVCFI 243 (415)
T ss_pred EEEeccC-hhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEeccCCcccee
Confidence 9999994 3999999887777899999999999999999999999 9999999999999831
Q ss_pred ----CCCeeeCCCchhhhcc
Q 009965 501 ----DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 501 ----~~~~kl~DfGla~~~~ 516 (521)
...+||.|||-|+.-.
T Consensus 244 r~~ks~~I~vIDFGsAtf~~ 263 (415)
T KOG0671|consen 244 RPLKSTAIKVIDFGSATFDH 263 (415)
T ss_pred ccCCCcceEEEecCCcceec
Confidence 2358999999998654
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.6e-17 Score=163.75 Aligned_cols=167 Identities=26% Similarity=0.367 Sum_probs=76.9
Q ss_pred EEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCcc-ccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecc
Q 009965 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKE-LGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 72 l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
++.||||+|+|.. .|..+..-.++-.|+||+|+|. .||.. |.+|+.|-+||||+|++. .+|+.+..|..|++|+||
T Consensus 105 Lt~lDLShNqL~E-vP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls 181 (1255)
T KOG0444|consen 105 LTILDLSHNQLRE-VPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLS 181 (1255)
T ss_pred ceeeecchhhhhh-cchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcC
Confidence 4444444444443 3444444444444444444444 22222 334444444444444444 344444444444444444
Q ss_pred cccCc-------------------------ccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcC
Q 009965 151 SNGLT-------------------------GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT 205 (521)
Q Consensus 151 ~N~l~-------------------------g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~ 205 (521)
+|.+. ..+|.++..|.+|..+|||.|.+. .+|..... ..++..+++++|.++
T Consensus 182 ~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~--l~~LrrLNLS~N~it 258 (1255)
T KOG0444|consen 182 NNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYK--LRNLRRLNLSGNKIT 258 (1255)
T ss_pred CChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhh--hhhhheeccCcCcee
Confidence 44221 123444444444444444444444 34432211 134455566666655
Q ss_pred ccc----CCCCCCEEeccCCccccCCcccccc---CCCcccCCCcCC
Q 009965 206 GLC----HLSQLKVADFSYNFFVGSIPKCLEY---LPSTSFQGNCLQ 245 (521)
Q Consensus 206 ~~~----~l~~L~~L~ls~N~l~g~ip~~l~~---l~~l~~~~N~l~ 245 (521)
.+. ...+|+.|++|.|+++ .+|.++-+ |+.|...+|+++
T Consensus 259 eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~ 304 (1255)
T KOG0444|consen 259 ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLT 304 (1255)
T ss_pred eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCccc
Confidence 432 2455666666666666 56655433 334455555443
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.1e-14 Score=157.44 Aligned_cols=91 Identities=37% Similarity=0.710 Sum_probs=83.4
Q ss_pred CCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecccccCcccCchhhhCCCCCCEEeCC
Q 009965 95 YLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLD 174 (521)
Q Consensus 95 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 174 (521)
.++.|+|++|.+.|.+|..++.|++|+.|+|++|+++|.+|..++.+++|+.|+|++|+++|.+|..+++|++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCC
Q 009965 175 RNRLQGAVPAG 185 (521)
Q Consensus 175 ~N~l~g~~p~~ 185 (521)
+|+++|.+|..
T Consensus 499 ~N~l~g~iP~~ 509 (623)
T PLN03150 499 GNSLSGRVPAA 509 (623)
T ss_pred CCcccccCChH
Confidence 99999888864
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.3e-14 Score=145.18 Aligned_cols=140 Identities=16% Similarity=0.124 Sum_probs=111.9
Q ss_pred chhCcCCCeeEEEEEeCCC--CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCC----CCccceeeEEe-cCCCCceE
Q 009965 364 NIIGSSPDSLVYKGTMKGG--PEIAVISLCIKEEHWTGYLELYFQREVADLARINH----ENTGKLLGYCR-ESSPFTRM 436 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~--~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H----~niv~l~g~~~-~~~~~~~~ 436 (521)
..||+|+||.||.+..... ..+|+|.-...... . ...+..|+.++..+.+ +++..+++... ... ..+
T Consensus 24 ~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~---~-~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~--~~~ 97 (322)
T KOG1164|consen 24 KKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGS---K-PSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTED--FNF 97 (322)
T ss_pred eeccccCCceEEEEEecCCCCeeEEEEEEEecccC---C-CccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCc--eeE
Confidence 7899999999999998653 46777765432211 1 1146778888888863 57888888874 444 789
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCC-----CCeeeCCCch
Q 009965 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED-----FSPKVSPLCL 511 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~-----~~~kl~DfGl 511 (521)
+||+.+. -+|.++......+.++-.+.++|+.|+..+|.++|+. +++||||||.|++++.. ..+.|.|||+
T Consensus 98 iVM~l~G-~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl 173 (322)
T KOG1164|consen 98 IVMSLLG-PSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDFGL 173 (322)
T ss_pred EEEeccC-ccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence 9999984 4999987544446799999999999999999999999 99999999999999754 4689999999
Q ss_pred hh
Q 009965 512 SF 513 (521)
Q Consensus 512 a~ 513 (521)
|+
T Consensus 174 ar 175 (322)
T KOG1164|consen 174 AR 175 (322)
T ss_pred Cc
Confidence 98
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.56 E-value=4.2e-16 Score=157.54 Aligned_cols=176 Identities=26% Similarity=0.278 Sum_probs=130.3
Q ss_pred CCCEEEEEecCCCCC-ccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCc-ccCCCccCce
Q 009965 69 RDRVLKINISGSSLK-GFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPP-EIGNLTGLVK 146 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~ 146 (521)
.++++.+++..|+|. .-+|+++..|..|+.||||+|++. ..|..+..-+++-+|+||+|+|. .||. -|.+|+.|-+
T Consensus 77 Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLf 154 (1255)
T KOG0444|consen 77 LPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLF 154 (1255)
T ss_pred chhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhh
Confidence 346778888888886 348999999999999999999998 78999999999999999999998 5564 5678999999
Q ss_pred eecccccCcccCchhhhCCCCCCEEeCCCCCCCc----cCCCCCCC-------------cc------cccccccccccCC
Q 009965 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQG----AVPAGSNS-------------GY------TANIHGMYASSAN 203 (521)
Q Consensus 147 L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g----~~p~~~~~-------------~~------~~~l~~l~l~~n~ 203 (521)
||||+|++. .+|+.+..|..|++|+|++|.+.- .+|+-... .+ ..++..++++.|+
T Consensus 155 LDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~ 233 (1255)
T KOG0444|consen 155 LDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENN 233 (1255)
T ss_pred hccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccC
Confidence 999999999 899999999999999999998742 34431000 00 1234445666666
Q ss_pred cCcc----cCCCCCCEEeccCCccccCCc--cccccCCCcccCCCcCCCC
Q 009965 204 LTGL----CHLSQLKVADFSYNFFVGSIP--KCLEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 204 l~~~----~~l~~L~~L~ls~N~l~g~ip--~~l~~l~~l~~~~N~l~~~ 247 (521)
+..+ -.+.+|+.|+||+|+++..-- ..+.+++.|+++.|+++.+
T Consensus 234 Lp~vPecly~l~~LrrLNLS~N~iteL~~~~~~W~~lEtLNlSrNQLt~L 283 (1255)
T KOG0444|consen 234 LPIVPECLYKLRNLRRLNLSGNKITELNMTEGEWENLETLNLSRNQLTVL 283 (1255)
T ss_pred CCcchHHHhhhhhhheeccCcCceeeeeccHHHHhhhhhhccccchhccc
Confidence 6543 245666777777776652111 2345666777777766654
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.9e-14 Score=135.93 Aligned_cols=144 Identities=12% Similarity=0.136 Sum_probs=114.0
Q ss_pred hchhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEEEe
Q 009965 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
.++||+|+||+++.|+.- ++..||||.=..+.+. .++..|.+..+.+ .-++|...+-|..... +-.||+|
T Consensus 33 GkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~A------PQLrdEYr~YKlL~g~~GIP~vYYFGqeG~--~NiLVid 104 (449)
T KOG1165|consen 33 GKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEA------PQLRDEYRTYKLLGGTEGIPQVYYFGQEGK--YNILVID 104 (449)
T ss_pred ccccccCcceeeecccccccCceEEEEeccccCCc------chHHHHHHHHHHHcCCCCCCceeeeccccc--hhhhhhh
Confidence 378999999999999764 8899999986554432 2456677666666 4688887765555444 6789999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCC-----CCeeeCCCchhhhc
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED-----FSPKVSPLCLSFLL 515 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~-----~~~kl~DfGla~~~ 515 (521)
.+.. +|+|+..-.. +.++..+...||.|+..-++|+|+. .+|.|||||+|+||... ..+.|+|||+|+.+
T Consensus 105 LLGP-SLEDLFD~Cg-R~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Y 179 (449)
T KOG1165|consen 105 LLGP-SLEDLFDLCG-RRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEY 179 (449)
T ss_pred hhCc-CHHHHHHHhc-CcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchhhh
Confidence 9954 8888775333 3589999999999999999999999 99999999999999743 45899999999988
Q ss_pred cccc
Q 009965 516 VSSI 519 (521)
Q Consensus 516 ~~~~ 519 (521)
.+..
T Consensus 180 rDp~ 183 (449)
T KOG1165|consen 180 RDPK 183 (449)
T ss_pred cCcc
Confidence 6543
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.6e-16 Score=136.41 Aligned_cols=139 Identities=27% Similarity=0.423 Sum_probs=124.8
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCC-CCCCcccCCCccCceee
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT-GPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-g~~p~~~~~l~~L~~L~ 148 (521)
.+++.|++++|++.. +|..++.++.|+.|+++-|++. .+|..|+.++.|++|||++|++. ..+|..|..|+.|+.|+
T Consensus 56 ~nlevln~~nnqie~-lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldltynnl~e~~lpgnff~m~tlraly 133 (264)
T KOG0617|consen 56 KNLEVLNLSNNQIEE-LPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALY 133 (264)
T ss_pred hhhhhhhcccchhhh-cChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhccccccccccCCcchhHHHHHHHHH
Confidence 468889999999987 8899999999999999999998 89999999999999999999996 46899999999999999
Q ss_pred cccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcccCCCCCCEEeccCCccccCCc
Q 009965 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP 228 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~ip 228 (521)
|+.|.|. .+|..++++++|+.|.+..|.+- ++|. .+..+.+|+.|.+.+|+++ .+|
T Consensus 134 l~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpk---------------------eig~lt~lrelhiqgnrl~-vlp 189 (264)
T KOG0617|consen 134 LGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPK---------------------EIGDLTRLRELHIQGNRLT-VLP 189 (264)
T ss_pred hcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcH---------------------HHHHHHHHHHHhcccceee-ecC
Confidence 9999999 89999999999999999999987 6664 3445778999999999998 777
Q ss_pred cccccC
Q 009965 229 KCLEYL 234 (521)
Q Consensus 229 ~~l~~l 234 (521)
..+.++
T Consensus 190 pel~~l 195 (264)
T KOG0617|consen 190 PELANL 195 (264)
T ss_pred hhhhhh
Confidence 776655
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.6e-14 Score=147.95 Aligned_cols=146 Identities=16% Similarity=0.175 Sum_probs=102.4
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccch------------------------------h------hHHHHHH
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTG------------------------------Y------LELYFQR 407 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~------------------------------~------~~~~~~~ 407 (521)
+.||.|++|+||+|++++|+.||||+........-. . .+-+|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 579999999999999999999999997433110000 0 0113555
Q ss_pred HHHHHhcc----CCCCccceeeEEecCCCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHH-HHHHHhcCC
Q 009965 408 EVADLARI----NHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIAR-GLKYLHTEL 482 (521)
Q Consensus 408 E~~~l~~l----~H~niv~l~g~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~-gL~yLH~~~ 482 (521)
|.+.+.++ +|.+-+.+-..+.+... ..+|||||+++++|.++...... .. .+.+++..+++ .+..+|..
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~-~~vLvmE~i~G~~L~~~~~~~~~-~~---~~~~ia~~~~~~~l~ql~~~- 276 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTS-ERVLTMEWIDGIPLSDIAALDEA-GL---DRKALAENLARSFLNQVLRD- 276 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcC-CceEEEEeECCcccccHHHHHhc-CC---CHHHHHHHHHHHHHHHHHhC-
Confidence 66655555 23333333334432211 57999999999999988642211 12 34567777766 46788887
Q ss_pred CCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 483 GPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 483 ~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
+++|+|++|.||++++++.+++.|||++..+.+
T Consensus 277 --g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 277 --GFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred --CceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 999999999999999999999999999987764
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.9e-13 Score=135.63 Aligned_cols=146 Identities=25% Similarity=0.310 Sum_probs=122.1
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCC-CccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHE-NTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~-niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
..+|.|+||.||++... ..+++|.+...... .......|.+|+.+++.+.|+ +++++...+.... ..++++||+
T Consensus 6 ~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~ 80 (384)
T COG0515 6 RKLGEGSFGEVYLARDR--KLVALKVLAKKLES-KSKEVERFLREIQILASLNHPPNIVKLYDFFQDEG--SLYLVMEYV 80 (384)
T ss_pred EeecCCCCeEEEEEEec--cEEEEEeechhhcc-chhHHHHHHHHHHHHHHccCCcceeeEEEEEecCC--EEEEEEecC
Confidence 56889999999999887 67888888544322 112456799999999999988 7999999996655 579999999
Q ss_pred CCCChhhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCC-CeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGER-CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-SPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~-~~kl~DfGla~~~~~ 517 (521)
.++++.+++..... ..++......+..+++.++.|+|.. +++|||+||+||+++... .++++|||+++.+..
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~ 154 (384)
T COG0515 81 DGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPD 154 (384)
T ss_pred CCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCC
Confidence 99999977753321 2588899999999999999999999 899999999999999988 799999999985543
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.4e-15 Score=136.41 Aligned_cols=138 Identities=25% Similarity=0.435 Sum_probs=117.8
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
.+|.+...|+.|+|+++++. +++|++.. .++.....++|..|...++.+.||||++++|.|.... ...++..||+
T Consensus 196 tkl~e~hsgelwrgrwqgnd-ivakil~v--r~~t~risrdfneefp~lrifshpnilpvlgacnspp--nlv~isq~mp 270 (448)
T KOG0195|consen 196 TKLAESHSGELWRGRWQGND-IVAKILNV--REVTARISRDFNEEFPALRIFSHPNILPVLGACNSPP--NLVIISQYMP 270 (448)
T ss_pred hhhccCCCcccccccccCcc-hhhhhhhh--hhcchhhcchhhhhCcceeeecCCchhhhhhhccCCC--CceEeeeecc
Confidence 57889999999999997654 55666644 3444555678999999999999999999999998765 7899999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeC
Q 009965 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVS 507 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~ 507 (521)
.|+|+..+|+.....++..+.++++.++|+|++|||+. .|-|.---|.+..|++|++.+++|+
T Consensus 271 ~gslynvlhe~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltaris 333 (448)
T KOG0195|consen 271 FGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARIS 333 (448)
T ss_pred chHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhhee
Confidence 99999999988777789999999999999999999985 4445555789999999999999875
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.48 E-value=8.2e-14 Score=138.47 Aligned_cols=144 Identities=16% Similarity=0.115 Sum_probs=118.6
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC------CCCccceeeEEecCCCCceE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN------HENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~------H~niv~l~g~~~~~~~~~~~ 436 (521)
...|+|-|++|.+|... .|.+||||++.... ...+.=++|+++|.++. .-+.++|+..|...+ +.+
T Consensus 438 ~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-----~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hkn--HLC 510 (752)
T KOG0670|consen 438 GYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-----VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKN--HLC 510 (752)
T ss_pred eccccceeeeeeeccccCCCCeeEEEEeecch-----HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcc--eeE
Confidence 45789999999999886 57899999985432 22344578999999994 357899998888777 899
Q ss_pred EEEecCCCCChhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCC-CCeeeCCCchhhh
Q 009965 437 LVFDYASNGTLYEHLHYG-ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED-FSPKVSPLCLSFL 514 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~-~~~kl~DfGla~~ 514 (521)
||+|-+.- +|.+.|..- ....|.......++.|+.-||..|-.. +|+|.||||.|||+++. ...||||||-|-.
T Consensus 511 lVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~ 586 (752)
T KOG0670|consen 511 LVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNILKLCDFGSASF 586 (752)
T ss_pred EEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcceeeeccCccccc
Confidence 99999965 999999743 234588888999999999999999987 99999999999999874 5689999999887
Q ss_pred cccc
Q 009965 515 LVSS 518 (521)
Q Consensus 515 ~~~~ 518 (521)
...-
T Consensus 587 ~~en 590 (752)
T KOG0670|consen 587 ASEN 590 (752)
T ss_pred cccc
Confidence 6543
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.43 E-value=4.2e-14 Score=136.44 Aligned_cols=179 Identities=21% Similarity=0.247 Sum_probs=123.2
Q ss_pred CCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccC-CcCCCCCCcccCCCccCcee
Q 009965 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGT-NQLTGPIPPEIGNLTGLVKI 147 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L 147 (521)
+...+.|+|..|+|+...|..|+.+.+|+.||||+|+|+.+-|++|.+|++|..|-+.+ |+|+......|++|..|+.|
T Consensus 66 P~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrL 145 (498)
T KOG4237|consen 66 PPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRL 145 (498)
T ss_pred CCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHH
Confidence 35678999999999998889999999999999999999999999999999988776655 88884333444444444433
Q ss_pred ecccccCcccCch-------------------------------------------------------------------
Q 009965 148 NLQSNGLTGRLPA------------------------------------------------------------------- 160 (521)
Q Consensus 148 ~Ls~N~l~g~~p~------------------------------------------------------------------- 160 (521)
.+.-|++.-...+
T Consensus 146 llNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc 225 (498)
T KOG4237|consen 146 LLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARC 225 (498)
T ss_pred hcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhccccee
Confidence 3333322211111
Q ss_pred -------------------------------------------hhhCCCCCCEEeCCCCCCCccCCCCCCCccccccccc
Q 009965 161 -------------------------------------------ELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGM 197 (521)
Q Consensus 161 -------------------------------------------~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l 197 (521)
.|..|++|+.|+|++|++++.-+ +.+.+ ...+.++
T Consensus 226 ~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~-~aFe~-~a~l~eL 303 (498)
T KOG4237|consen 226 VSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIED-GAFEG-AAELQEL 303 (498)
T ss_pred cchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhh-hhhcc-hhhhhhh
Confidence 25566677777777777763332 22221 1345566
Q ss_pred ccccCCcCc-----ccCCCCCCEEeccCCccccCCcccccc---CCCcccCCCcCCCCCC
Q 009965 198 YASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCLEY---LPSTSFQGNCLQNKDP 249 (521)
Q Consensus 198 ~l~~n~l~~-----~~~l~~L~~L~ls~N~l~g~ip~~l~~---l~~l~~~~N~l~~~~~ 249 (521)
++..|++.. |..++.|+.|+|.+|+++-.-|..|.. +..+.+-+|++.+.|-
T Consensus 304 ~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~ 363 (498)
T KOG4237|consen 304 YLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCR 363 (498)
T ss_pred hcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccc
Confidence 666666653 456788888999999988777766644 5667788888877663
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.42 E-value=3.6e-15 Score=143.91 Aligned_cols=165 Identities=30% Similarity=0.416 Sum_probs=76.8
Q ss_pred EEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecccccC
Q 009965 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGL 154 (521)
Q Consensus 75 L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 154 (521)
++.+.|.+.. +|++++.+..|+.|+..+|+++ ..|+.+..+.+|..|++.+|.+. .+|+..-+++.|++||...|.+
T Consensus 119 l~~s~n~~~e-l~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~-~l~~~~i~m~~L~~ld~~~N~L 195 (565)
T KOG0472|consen 119 LDCSSNELKE-LPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLK-ALPENHIAMKRLKHLDCNSNLL 195 (565)
T ss_pred hhccccceee-cCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchh-hCCHHHHHHHHHHhcccchhhh
Confidence 3333333332 3333444444444444444443 33344444444444444444444 2222222345555555555555
Q ss_pred cccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCc---------------------ccccccccccccCCcCc----ccC
Q 009965 155 TGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSG---------------------YTANIHGMYASSANLTG----LCH 209 (521)
Q Consensus 155 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~---------------------~~~~l~~l~l~~n~l~~----~~~ 209 (521)
+ .+|+.++.|.+|..|||..|++. .+|...... -...+..+++..|++++ ++-
T Consensus 196 ~-tlP~~lg~l~~L~~LyL~~Nki~-~lPef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklke~Pde~cl 273 (565)
T KOG0472|consen 196 E-TLPPELGGLESLELLYLRRNKIR-FLPEFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLKEVPDEICL 273 (565)
T ss_pred h-cCChhhcchhhhHHHHhhhcccc-cCCCCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccccCchHHHH
Confidence 5 55566666666666666666665 444321110 01233344555555543 234
Q ss_pred CCCCCEEeccCCccccCCccccccC--CCcccCCCcCC
Q 009965 210 LSQLKVADFSYNFFVGSIPKCLEYL--PSTSFQGNCLQ 245 (521)
Q Consensus 210 l~~L~~L~ls~N~l~g~ip~~l~~l--~~l~~~~N~l~ 245 (521)
+.+|+.||+|+|.++ .+|..++++ ..+.+.||++.
T Consensus 274 LrsL~rLDlSNN~is-~Lp~sLgnlhL~~L~leGNPlr 310 (565)
T KOG0472|consen 274 LRSLERLDLSNNDIS-SLPYSLGNLHLKFLALEGNPLR 310 (565)
T ss_pred hhhhhhhcccCCccc-cCCcccccceeeehhhcCCchH
Confidence 555666666666665 445455443 34555566443
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=5.4e-13 Score=145.35 Aligned_cols=163 Identities=25% Similarity=0.374 Sum_probs=86.3
Q ss_pred CEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecc
Q 009965 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
.++.|+|++|.|+. +|..+. ++|++|+|++|+|+ .+|..+. ++|+.|+|++|++. .+|..+. ++|+.|+|+
T Consensus 200 ~L~~L~Ls~N~Lts-LP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls 270 (754)
T PRK15370 200 QITTLILDNNELKS-LPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLF 270 (754)
T ss_pred CCcEEEecCCCCCc-CChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECc
Confidence 34455555555553 333332 35666666666665 3444332 35666666666665 4555443 467777777
Q ss_pred cccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCC-----------------cccccccccccccCCcCcccC--CC
Q 009965 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNS-----------------GYTANIHGMYASSANLTGLCH--LS 211 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~-----------------~~~~~l~~l~l~~n~l~~~~~--l~ 211 (521)
+|+|+ .+|..+. ++|+.|+|++|+|+ .+|..... ....++..++++.|.++.+.. .+
T Consensus 271 ~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp~sL~~L~Ls~N~Lt~LP~~l~~sL~~L~Ls~N~Lt~LP~~l~~ 346 (754)
T PRK15370 271 HNKIS-CLPENLP--EELRYLSVYDNSIR-TLPAHLPSGITHLNVQSNSLTALPETLPPGLKTLEAGENALTSLPASLPP 346 (754)
T ss_pred CCccC-ccccccC--CCCcEEECCCCccc-cCcccchhhHHHHHhcCCccccCCccccccceeccccCCccccCChhhcC
Confidence 77777 4665553 46777777777776 34432111 011233344444444443321 13
Q ss_pred CCCEEeccCCccccCCcccc-ccCCCcccCCCcCCCC
Q 009965 212 QLKVADFSYNFFVGSIPKCL-EYLPSTSFQGNCLQNK 247 (521)
Q Consensus 212 ~L~~L~ls~N~l~g~ip~~l-~~l~~l~~~~N~l~~~ 247 (521)
+|+.|++++|+|+ .+|..+ .+|+.|++++|.+...
T Consensus 347 sL~~L~Ls~N~L~-~LP~~lp~~L~~LdLs~N~Lt~L 382 (754)
T PRK15370 347 ELQVLDVSKNQIT-VLPETLPPTITTLDVSRNALTNL 382 (754)
T ss_pred cccEEECCCCCCC-cCChhhcCCcCEEECCCCcCCCC
Confidence 5666666666665 344333 3556666666666544
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.2e-12 Score=142.01 Aligned_cols=150 Identities=29% Similarity=0.334 Sum_probs=80.6
Q ss_pred CEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecc
Q 009965 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
+++.|++++|+|+. +|. .+++|++|+|++|+|+. +|.. .++|+.|+|++|.++ .+|.. .++|+.|+|+
T Consensus 223 ~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~Ls~N~L~-~Lp~l---p~~L~~L~Ls 290 (788)
T PRK15387 223 HITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTS-LPVL---PPGLLELSIFSNPLT-HLPAL---PSGLCKLWIF 290 (788)
T ss_pred CCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccCc-ccCc---ccccceeeccCCchh-hhhhc---hhhcCEEECc
Confidence 46667777777765 443 24667777777777763 4432 345666666666665 34432 2456666777
Q ss_pred cccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcccCCC-CCCEEeccCCccccCCcc
Q 009965 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLS-QLKVADFSYNFFVGSIPK 229 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~-~L~~L~ls~N~l~g~ip~ 229 (521)
+|+++ .+|. .+++|+.|+|++|+|++ +|... ..+..+++++|+++++..++ +|+.|+|++|+|+ .+|.
T Consensus 291 ~N~Lt-~LP~---~p~~L~~LdLS~N~L~~-Lp~lp-----~~L~~L~Ls~N~L~~LP~lp~~Lq~LdLS~N~Ls-~LP~ 359 (788)
T PRK15387 291 GNQLT-SLPV---LPPGLQELSVSDNQLAS-LPALP-----SELCKLWAYNNQLTSLPTLPSGLQELSVSDNQLA-SLPT 359 (788)
T ss_pred CCccc-cccc---cccccceeECCCCcccc-CCCCc-----ccccccccccCccccccccccccceEecCCCccC-CCCC
Confidence 77776 4554 23567788888887773 44311 12334445555554443332 4555555555554 2333
Q ss_pred ccccCCCcccCCCc
Q 009965 230 CLEYLPSTSFQGNC 243 (521)
Q Consensus 230 ~l~~l~~l~~~~N~ 243 (521)
...++..|.+++|.
T Consensus 360 lp~~L~~L~Ls~N~ 373 (788)
T PRK15387 360 LPSELYKLWAYNNR 373 (788)
T ss_pred CCcccceehhhccc
Confidence 33333333333333
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.41 E-value=3.7e-13 Score=146.90 Aligned_cols=138 Identities=16% Similarity=0.152 Sum_probs=104.4
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC---CCCccceeeEEecCCCCceEEEEe
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN---HENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
..||+|+||.||+|...+|+.||+|.=.... .|. |.--..++.+|+ -+-|+.+...+.-.+ ..+||+|
T Consensus 704 ~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~-~WE------fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~--~S~lv~e 774 (974)
T KOG1166|consen 704 KEIGEGSYGSVYVATHSNGKLVALKVEKPPN-PWE------FYICLQVMERLKPQMLPSIMHISSAHVFQN--ASVLVSE 774 (974)
T ss_pred eeeccccceEEEEeecCCCcEEEEEeecCCC-cee------eeehHHHHHhhchhhhcchHHHHHHHccCC--cceeeee
Confidence 6899999999999999899999999753221 221 111122233333 234455544444444 5789999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeec-------CCCCeeeCCCchhh
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT-------EDFSPKVSPLCLSF 513 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld-------~~~~~kl~DfGla~ 513 (521)
|.+.|+|.+++. ....++|...+.++.++++-++.||.. +|||+||||.|.||. +..-++|+|||-+-
T Consensus 775 y~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~si 849 (974)
T KOG1166|consen 775 YSPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSI 849 (974)
T ss_pred ccccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEEEecccce
Confidence 999999999996 445699999999999999999999999 999999999999994 23458999999875
Q ss_pred hc
Q 009965 514 LL 515 (521)
Q Consensus 514 ~~ 515 (521)
-|
T Consensus 850 Dm 851 (974)
T KOG1166|consen 850 DM 851 (974)
T ss_pred ee
Confidence 43
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.2e-15 Score=147.10 Aligned_cols=145 Identities=28% Similarity=0.378 Sum_probs=116.6
Q ss_pred CEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecc
Q 009965 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
++..+++.+|.+....|..+. ++.|++||...|-+. .+|..++.|.+|.-|+|..|.+. .+| +|.+++.|+.|.++
T Consensus 161 ~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g 236 (565)
T KOG0472|consen 161 KLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVG 236 (565)
T ss_pred HHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhc
Confidence 355667777777764444443 788888888888776 67888888888888888888887 677 88888888888888
Q ss_pred cccCcccCchhhh-CCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc----cCCCCCCEEeccCCccc
Q 009965 151 SNGLTGRLPAELG-NLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL----CHLSQLKVADFSYNFFV 224 (521)
Q Consensus 151 ~N~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~----~~l~~L~~L~ls~N~l~ 224 (521)
.|++. .+|.+.+ .+++|..|||..|+++ +.|+..+. ..++..+++++|.++++ .++ .|+.|-+-+|.+.
T Consensus 237 ~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~cl--LrsL~rLDlSNN~is~Lp~sLgnl-hL~~L~leGNPlr 310 (565)
T KOG0472|consen 237 ENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICL--LRSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLR 310 (565)
T ss_pred ccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHH--hhhhhhhcccCCccccCCcccccc-eeeehhhcCCchH
Confidence 88888 7888877 8999999999999999 88987654 34688899999999875 456 7888889999885
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=5e-13 Score=145.58 Aligned_cols=162 Identities=23% Similarity=0.300 Sum_probs=107.6
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|+|++|.|+. +|..+. .+|+.|+|++|++. .+|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|
T Consensus 220 ~nL~~L~Ls~N~Lts-LP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~L 290 (754)
T PRK15370 220 GNIKTLYANSNQLTS-IPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSV 290 (754)
T ss_pred cCCCEEECCCCcccc-CChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEEC
Confidence 367788888888875 455442 35677777777766 4555543 35666666666666 4555443 35666666
Q ss_pred ccccCcccCchhhh-------------------CCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcccC-
Q 009965 150 QSNGLTGRLPAELG-------------------NLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCH- 209 (521)
Q Consensus 150 s~N~l~g~~p~~~~-------------------~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~- 209 (521)
++|+|+ .+|..+. -.++|+.|++++|.++ .+|... ...+..+++++|+++.+..
T Consensus 291 s~N~Lt-~LP~~lp~sL~~L~Ls~N~Lt~LP~~l~~sL~~L~Ls~N~Lt-~LP~~l----~~sL~~L~Ls~N~L~~LP~~ 364 (754)
T PRK15370 291 YDNSIR-TLPAHLPSGITHLNVQSNSLTALPETLPPGLKTLEAGENALT-SLPASL----PPELQVLDVSKNQITVLPET 364 (754)
T ss_pred CCCccc-cCcccchhhHHHHHhcCCccccCCccccccceeccccCCccc-cCChhh----cCcccEEECCCCCCCcCChh
Confidence 666666 2333221 1246777777777776 355432 2478889999999886542
Q ss_pred -CCCCCEEeccCCccccCCcccc-ccCCCcccCCCcCCCC
Q 009965 210 -LSQLKVADFSYNFFVGSIPKCL-EYLPSTSFQGNCLQNK 247 (521)
Q Consensus 210 -l~~L~~L~ls~N~l~g~ip~~l-~~l~~l~~~~N~l~~~ 247 (521)
.++|+.|++++|+|+ .+|..+ ..|+.+++++|++..+
T Consensus 365 lp~~L~~LdLs~N~Lt-~LP~~l~~sL~~LdLs~N~L~~L 403 (754)
T PRK15370 365 LPPTITTLDVSRNALT-NLPENLPAALQIMQASRNNLVRL 403 (754)
T ss_pred hcCCcCEEECCCCcCC-CCCHhHHHHHHHHhhccCCcccC
Confidence 368999999999999 567555 4688899999998865
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.4e-12 Score=141.42 Aligned_cols=164 Identities=28% Similarity=0.290 Sum_probs=86.5
Q ss_pred CCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCcccc-----------------CCCCCcEEEccCCcCC
Q 009965 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELG-----------------LLKRLKILDLGTNQLT 131 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~-----------------~l~~L~~L~Ls~N~l~ 131 (521)
..+++.|+|++|+|+. +|.. .++|+.|+|++|.|+. +|..+. .+++|+.|+|++|+|+
T Consensus 241 p~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~Ls~N~L~~-Lp~lp~~L~~L~Ls~N~Lt~LP~~p~~L~~LdLS~N~L~ 315 (788)
T PRK15387 241 PPELRTLEVSGNQLTS-LPVL---PPGLLELSIFSNPLTH-LPALPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLA 315 (788)
T ss_pred CCCCcEEEecCCccCc-ccCc---ccccceeeccCCchhh-hhhchhhcCEEECcCCccccccccccccceeECCCCccc
Confidence 3578999999999986 4532 3455556555555552 222110 1245666666666666
Q ss_pred CCCCcccCCCccCceeecccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCC---------------cccccccc
Q 009965 132 GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNS---------------GYTANIHG 196 (521)
Q Consensus 132 g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~---------------~~~~~l~~ 196 (521)
+ +|... .+|+.|++++|+|+ .+|.. ..+|++|+|++|+|+ .+|..... .....+..
T Consensus 316 ~-Lp~lp---~~L~~L~Ls~N~L~-~LP~l---p~~Lq~LdLS~N~Ls-~LP~lp~~L~~L~Ls~N~L~~LP~l~~~L~~ 386 (788)
T PRK15387 316 S-LPALP---SELCKLWAYNNQLT-SLPTL---PSGLQELSVSDNQLA-SLPTLPSELYKLWAYNNRLTSLPALPSGLKE 386 (788)
T ss_pred c-CCCCc---ccccccccccCccc-ccccc---ccccceEecCCCccC-CCCCCCcccceehhhccccccCcccccccce
Confidence 3 33211 22334444444444 23321 135667777777666 34431100 00123445
Q ss_pred cccccCCcCcccC-CCCCCEEeccCCccccCCccccccCCCcccCCCcCCCC
Q 009965 197 MYASSANLTGLCH-LSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 197 l~l~~n~l~~~~~-l~~L~~L~ls~N~l~g~ip~~l~~l~~l~~~~N~l~~~ 247 (521)
+++++|.++++.. .++|+.|++++|+|+ .+|....+|..+++++|+++.+
T Consensus 387 LdLs~N~Lt~LP~l~s~L~~LdLS~N~Ls-sIP~l~~~L~~L~Ls~NqLt~L 437 (788)
T PRK15387 387 LIVSGNRLTSLPVLPSELKELMVSGNRLT-SLPMLPSGLLSLSVYRNQLTRL 437 (788)
T ss_pred EEecCCcccCCCCcccCCCEEEccCCcCC-CCCcchhhhhhhhhccCccccc
Confidence 5666666655432 245666666666666 3565555666667777766643
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.33 E-value=4.5e-12 Score=114.46 Aligned_cols=132 Identities=14% Similarity=0.046 Sum_probs=95.4
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccc-eeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGK-LLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~-l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.++.|.++.||+++.. +..+++|....... ....+.+|+.++..+.+.++++ ++.+. . . ..++||||+
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~P~~~~~~-~-~--~~~lv~e~i 73 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-----LLINRENEAENSKLAAEAGIGPKLYYFD-P-E--TGVLITEFI 73 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc-----cccCHHHHHHHHHHHHHhCCCCceEEEe-C-C--CCeEEEEec
Confidence 35788999999999875 56799988633211 1224678999999887666554 44433 2 2 358999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--CCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL--GPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++.++.+.. . ....++.+++++|+.||... ...++|+|++|.||+++ ++.+++.|||.+..-+
T Consensus 74 ~G~~l~~~~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~~~ 138 (170)
T cd05151 74 EGSELLTED-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGMND 138 (170)
T ss_pred CCCcccccc-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccCCC
Confidence 998876431 1 11345689999999999872 22369999999999999 5689999999987543
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.7e-12 Score=133.54 Aligned_cols=146 Identities=10% Similarity=0.036 Sum_probs=90.9
Q ss_pred chhCcCCCeeEEEEEeCC-CCEEEEEEeeeecccc-------------------------c-----hhhHH------HHH
Q 009965 364 NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHW-------------------------T-----GYLEL------YFQ 406 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~-------------------------~-----~~~~~------~~~ 406 (521)
+.+|.|++|+||+|++++ |+.||||+........ . .+..+ +|.
T Consensus 125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~ 204 (537)
T PRK04750 125 KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLM 204 (537)
T ss_pred hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHH
Confidence 579999999999999987 9999999985432100 0 01112 244
Q ss_pred HHHHHHhccC----CCCccceeeEEecCCCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHH-HHHHhcC
Q 009965 407 REVADLARIN----HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG-LKYLHTE 481 (521)
Q Consensus 407 ~E~~~l~~l~----H~niv~l~g~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~g-L~yLH~~ 481 (521)
+|...+.+++ +.+.+.+-..+.+-. ...+|||||++++.+.++-.-.. ...+ +..++...++. +.-++..
T Consensus 205 ~Ea~N~~~~~~~f~~~~~v~VP~v~~d~s-t~~VLvmE~i~G~~l~d~~~l~~-~g~d---~~~la~~~v~~~~~Qif~~ 279 (537)
T PRK04750 205 REAANASQLRRNFEDSDMLYVPEVYWDYC-SETVMVMERMYGIPVSDVAALRA-AGTD---MKLLAERGVEVFFTQVFRD 279 (537)
T ss_pred HHHHHHHHHHHHccCCCCeecceeecccC-CCceEEEeeecCccHHhHHHHHh-cCCC---HHHHHHHHHHHHHHHHHhC
Confidence 4554444442 444444333343211 15789999999999987532111 1122 12222222221 1222344
Q ss_pred CCCCeEecCCCCCCeeecCCC----CeeeCCCchhhhccc
Q 009965 482 LGPPFTISELNSSAVYLTEDF----SPKVSPLCLSFLLVS 517 (521)
Q Consensus 482 ~~~~ivH~Dlk~~NiLld~~~----~~kl~DfGla~~~~~ 517 (521)
+++|+|++|.||+++.++ .+++.|||++..+++
T Consensus 280 ---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 280 ---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred ---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 999999999999999988 999999999887654
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=8.3e-13 Score=148.10 Aligned_cols=96 Identities=16% Similarity=0.177 Sum_probs=75.8
Q ss_pred ccCC-CCccceeeEEecCC-----CCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeE
Q 009965 414 RINH-ENTGKLLGYCRESS-----PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFT 487 (521)
Q Consensus 414 ~l~H-~niv~l~g~~~~~~-----~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iv 487 (521)
.++| +||+++++++.... ....+.++||++ ++|++++... ...+++.++..|+.||++||+|||+. +|+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---gIv 102 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECED-VSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQ---GIV 102 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccCC-ccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence 3456 68888999873211 114677889885 5999999643 34699999999999999999999998 999
Q ss_pred ecCCCCCCeeec-------------------CCCCeeeCCCchhhh
Q 009965 488 ISELNSSAVYLT-------------------EDFSPKVSPLCLSFL 514 (521)
Q Consensus 488 H~Dlk~~NiLld-------------------~~~~~kl~DfGla~~ 514 (521)
||||||+||||+ .++.+|++|||+++.
T Consensus 103 HrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~ 148 (793)
T PLN00181 103 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRR 148 (793)
T ss_pred eccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccc
Confidence 999999999994 355677888888764
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.2e-13 Score=144.06 Aligned_cols=170 Identities=32% Similarity=0.453 Sum_probs=96.1
Q ss_pred CCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccc----------------------cCCccccCCCCCcEEEcc
Q 009965 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIG----------------------IIPKELGLLKRLKILDLG 126 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~----------------------~~p~~~~~l~~L~~L~Ls 126 (521)
+..+++++++.|++++ +|..++.+.+|+.|+..+|+|+. .+|....+++.|++|||.
T Consensus 240 p~nl~~~dis~n~l~~-lp~wi~~~~nle~l~~n~N~l~~lp~ri~~~~~L~~l~~~~nel~yip~~le~~~sL~tLdL~ 318 (1081)
T KOG0618|consen 240 PLNLQYLDISHNNLSN-LPEWIGACANLEALNANHNRLVALPLRISRITSLVSLSAAYNELEYIPPFLEGLKSLRTLDLQ 318 (1081)
T ss_pred cccceeeecchhhhhc-chHHHHhcccceEecccchhHHhhHHHHhhhhhHHHHHhhhhhhhhCCCcccccceeeeeeeh
Confidence 3456666666666665 34556666666666666665531 245555667777777777
Q ss_pred CCcCCCCCCcc--------------------------------------------------cCCCccCceeecccccCcc
Q 009965 127 TNQLTGPIPPE--------------------------------------------------IGNLTGLVKINLQSNGLTG 156 (521)
Q Consensus 127 ~N~l~g~~p~~--------------------------------------------------~~~l~~L~~L~Ls~N~l~g 156 (521)
.|+|. .+|+. +.++.+|+.|+|++|+|.
T Consensus 319 ~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~- 396 (1081)
T KOG0618|consen 319 SNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLN- 396 (1081)
T ss_pred hcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccc-
Confidence 77765 44432 223334444444444444
Q ss_pred cCch-hhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc---cCCCCCCEEeccCCcccc-CCcccc
Q 009965 157 RLPA-ELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVG-SIPKCL 231 (521)
Q Consensus 157 ~~p~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~---~~l~~L~~L~ls~N~l~g-~ip~~l 231 (521)
.+|+ .+.++..|++|+||+|+|+ .+|..... ...++.+...+|++..+ ..+++|+.+|+|.|+|+- .+|...
T Consensus 397 ~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~--~~~L~tL~ahsN~l~~fPe~~~l~qL~~lDlS~N~L~~~~l~~~~ 473 (1081)
T KOG0618|consen 397 SFPASKLRKLEELEELNLSGNKLT-TLPDTVAN--LGRLHTLRAHSNQLLSFPELAQLPQLKVLDLSCNNLSEVTLPEAL 473 (1081)
T ss_pred cCCHHHHhchHHhHHHhcccchhh-hhhHHHHh--hhhhHHHhhcCCceeechhhhhcCcceEEecccchhhhhhhhhhC
Confidence 2222 2344444444444444444 34421111 12344445555555443 347889999999999963 456554
Q ss_pred --ccCCCcccCCCcC
Q 009965 232 --EYLPSTSFQGNCL 244 (521)
Q Consensus 232 --~~l~~l~~~~N~l 244 (521)
.+|+.|+++||..
T Consensus 474 p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 474 PSPNLKYLDLSGNTR 488 (1081)
T ss_pred CCcccceeeccCCcc
Confidence 5899999999953
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.27 E-value=4e-11 Score=105.84 Aligned_cols=135 Identities=17% Similarity=0.193 Sum_probs=101.0
Q ss_pred hhCcCCCeeEEEEEeCCCCEEEEEEeeeecccc----chhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEe
Q 009965 365 IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHW----TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 365 ~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
.+++|+-+.+|.+.+.+.. +.+|.=..|.... ..-...+..+|.+++.+++--.|....=|..+.. ...|+||
T Consensus 3 ~i~~GAEa~i~~~~~~g~~-av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~--~~~I~me 79 (204)
T COG3642 3 LIKQGAEAIIYLTDFLGLP-AVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPD--NGLIVME 79 (204)
T ss_pred hhhCCcceeEEeeeccCcc-eEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCC--CCEEEEE
Confidence 5789999999999775543 4454432332111 1112456788999999997666655555555555 6789999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
|+++-.|.+.+... +..++..|-.-+.-||.. +|+|+||+++||++..+. +.++||||+++-
T Consensus 80 ~I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 80 YIEGELLKDALEEA---------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred EeCChhHHHHHHhc---------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCccccc
Confidence 99998888888532 366788888889999999 999999999999998765 999999999853
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.25 E-value=4e-11 Score=105.23 Aligned_cols=145 Identities=13% Similarity=0.118 Sum_probs=105.3
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEE-Eeeeeccc---cchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVI-SLCIKEEH---WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk-~~~~~~~~---~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
.++-+|+-+.|+++.+.+. ...|| +..++... ...-.+++..+|.+.+.+++--.|.-..=++.+.. .-.|+|
T Consensus 13 ~likQGAEArv~~~~~~Ge-~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~--~~~i~M 89 (229)
T KOG3087|consen 13 ELIKQGAEARVPRGSFSGE-AAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTY--GGQIYM 89 (229)
T ss_pred eeeeccceeeEeeeccCCc-eeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecC--CCeEEE
Confidence 5788999999999998654 44444 33332211 11224577899999999997666665555665555 457999
Q ss_pred ecCCC-CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCC---CeeeCCCchhhh
Q 009965 440 DYASN-GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF---SPKVSPLCLSFL 514 (521)
Q Consensus 440 ey~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~---~~kl~DfGla~~ 514 (521)
||+++ -++.+++......+.........+..|.+.+.-||.. .|+|+||.++||++..++ .+.+.|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99976 3888888644333333333478899999999999999 999999999999996654 468999999764
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.24 E-value=1e-10 Score=106.90 Aligned_cols=140 Identities=11% Similarity=0.132 Sum_probs=98.2
Q ss_pred chhCcCCCeeEEEEEeCC-------CCEEEEEEeeeecc------cc---c---------h----hhHHHHHHHHHHHhc
Q 009965 364 NIIGSSPDSLVYKGTMKG-------GPEIAVISLCIKEE------HW---T---------G----YLELYFQREVADLAR 414 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~-------~~~vavk~~~~~~~------~~---~---------~----~~~~~~~~E~~~l~~ 414 (521)
..||.|--+.||.|...+ +..+|||+...... .+ + . .......+|.+.|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 368999999999997653 47899998753210 00 0 0 011223489999999
Q ss_pred cCC--CCccceeeEEecCCCCceEEEEecCCCCChhh-hhccCCCCCCCHHHHHHHHHHHHHHHHHH-hcCCCCCeEecC
Q 009965 415 INH--ENTGKLLGYCRESSPFTRMLVFDYASNGTLYE-HLHYGERCQVSWTRRMKIVIGIARGLKYL-HTELGPPFTISE 490 (521)
Q Consensus 415 l~H--~niv~l~g~~~~~~~~~~~lv~ey~~~gsL~~-~l~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ivH~D 490 (521)
+.. -++.+++++ . ..+|||||+.++.+.. .+. . ..++..+..++..+++.+|.++ |.. ++||||
T Consensus 83 l~~~Gv~vP~pi~~--~----~~~lvME~Ig~~~~~~~~Lk-d--~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGD 150 (197)
T cd05146 83 MQKAGIPCPEVVVL--K----KHVLVMSFIGDDQVPAPKLK-D--AKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHAD 150 (197)
T ss_pred HHHcCCCCCeEEEe--c----CCEEEEEEcCCCCccchhhh-c--cccCHHHHHHHHHHHHHHHHHHHHhC---CeecCC
Confidence 853 456666654 2 4589999997654422 221 1 1244556677889999999999 676 999999
Q ss_pred CCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 491 LNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 491 lk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|++.|||+++ +.++|+|||.|-..+
T Consensus 151 Ls~~NIL~~~-~~v~iIDF~qav~~~ 175 (197)
T cd05146 151 LSEYNMLWHD-GKVWFIDVSQSVEPT 175 (197)
T ss_pred CCHHHEEEEC-CcEEEEECCCceeCC
Confidence 9999999974 679999999876543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.20 E-value=7.4e-12 Score=133.90 Aligned_cols=144 Identities=14% Similarity=0.157 Sum_probs=109.5
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeee--ccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEe
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIK--EEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~--~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
.++|.|++|.|+..... .....+.|....+ ...........+..|+.+-..++|+|++..+..+.+.. ...-+||
T Consensus 324 ~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~--~~~~~mE 401 (601)
T KOG0590|consen 324 RVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEID--GILQSME 401 (601)
T ss_pred ceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcc--cchhhhh
Confidence 68999999977777554 3333444433211 11111222233667888888999999988887776655 3444599
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
|+++ +|..++.... .+.-.++-.+..|+..|+.|+|+. +|.|||+|++|+++..++.+||+|||.+..+
T Consensus 402 ~~~~-Dlf~~~~~~~--~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf 470 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSNG--KLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVF 470 (601)
T ss_pred cccH-HHHHHHhccc--ccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceee
Confidence 9999 9999996542 377788899999999999999999 9999999999999999999999999998754
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.8e-13 Score=136.39 Aligned_cols=165 Identities=28% Similarity=0.431 Sum_probs=101.4
Q ss_pred EEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeeccc
Q 009965 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151 (521)
Q Consensus 72 l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 151 (521)
.+..||+.|++.. +|.++..+..|+.|.|.+|.+. .+|..+.+|..|++|||+.|+++ .+|..+..|+ |+.|-+++
T Consensus 77 t~~aDlsrNR~~e-lp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sN 152 (722)
T KOG0532|consen 77 TVFADLSRNRFSE-LPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSN 152 (722)
T ss_pred hhhhhcccccccc-CchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEec
Confidence 3456777777764 6666666666666777777666 56666677777777777777766 5666665553 66666677
Q ss_pred ccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc----cCCCCCCEEeccCCccccCC
Q 009965 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL----CHLSQLKVADFSYNFFVGSI 227 (521)
Q Consensus 152 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~----~~l~~L~~L~ls~N~l~g~i 227 (521)
|+++ .+|+.++.+..|..||.+.|.+. .+|..... ...+..+.+..|++..+ +.| .|..||+|.|+++ .|
T Consensus 153 Nkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~--l~slr~l~vrRn~l~~lp~El~~L-pLi~lDfScNkis-~i 226 (722)
T KOG0532|consen 153 NKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGY--LTSLRDLNVRRNHLEDLPEELCSL-PLIRLDFSCNKIS-YL 226 (722)
T ss_pred Cccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhh--HHHHHHHHHhhhhhhhCCHHHhCC-ceeeeecccCcee-ec
Confidence 7666 66666666666666777766666 44442211 12344445555555432 222 3666777777776 67
Q ss_pred ccccccC---CCcccCCCcCCC
Q 009965 228 PKCLEYL---PSTSFQGNCLQN 246 (521)
Q Consensus 228 p~~l~~l---~~l~~~~N~l~~ 246 (521)
|.+|.+| ..+.+..|+++.
T Consensus 227 Pv~fr~m~~Lq~l~LenNPLqS 248 (722)
T KOG0532|consen 227 PVDFRKMRHLQVLQLENNPLQS 248 (722)
T ss_pred chhhhhhhhheeeeeccCCCCC
Confidence 7666444 345566676554
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.20 E-value=3e-12 Score=128.05 Aligned_cols=179 Identities=25% Similarity=0.259 Sum_probs=131.2
Q ss_pred CCCEEEEEecCCCCCccCCccccCCCC---CCEEECcCCcccc----cCCccccCC-CCCcEEEccCCcCCCC----CCc
Q 009965 69 RDRVLKINISGSSLKGFLAPELGLLTY---LQELILHGNNLIG----IIPKELGLL-KRLKILDLGTNQLTGP----IPP 136 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~---L~~L~L~~N~l~~----~~p~~~~~l-~~L~~L~Ls~N~l~g~----~p~ 136 (521)
..+++.|+|++|.+.+..+..+..+.. |++|++++|++++ .+...+..+ ++|+.|+|++|.+++. ++.
T Consensus 80 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~ 159 (319)
T cd00116 80 GCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAK 159 (319)
T ss_pred cCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHH
Confidence 458999999999998777777766666 9999999999883 344456677 8999999999999843 344
Q ss_pred ccCCCccCceeecccccCcc----cCchhhhCCCCCCEEeCCCCCCCccCCCCC--CCcccccccccccccCCcCcc---
Q 009965 137 EIGNLTGLVKINLQSNGLTG----RLPAELGNLISLEELHLDRNRLQGAVPAGS--NSGYTANIHGMYASSANLTGL--- 207 (521)
Q Consensus 137 ~~~~l~~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~--~~~~~~~l~~l~l~~n~l~~~--- 207 (521)
.+..+++|++|+|++|.+++ .++..+..+++|++|+|++|.+++.-.... .......+..+++++|.++..
T Consensus 160 ~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~ 239 (319)
T cd00116 160 ALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAA 239 (319)
T ss_pred HHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHH
Confidence 56677899999999999984 244556677899999999999874322110 001124688889999988741
Q ss_pred --c-----CCCCCCEEeccCCcccc----CCccc---cccCCCcccCCCcCCCC
Q 009965 208 --C-----HLSQLKVADFSYNFFVG----SIPKC---LEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 208 --~-----~l~~L~~L~ls~N~l~g----~ip~~---l~~l~~l~~~~N~l~~~ 247 (521)
. ..++|+.|++++|.++. .++.. +.++..+++++|.++..
T Consensus 240 ~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~ 293 (319)
T cd00116 240 ALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEE 293 (319)
T ss_pred HHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHH
Confidence 1 13789999999999862 12222 35678889999988764
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.20 E-value=3.6e-12 Score=127.41 Aligned_cols=177 Identities=25% Similarity=0.180 Sum_probs=127.6
Q ss_pred CCEEEEEecCCCCCc------cCCccccCCCCCCEEECcCCcccccCCccccCCCC---CcEEEccCCcCCC----CCCc
Q 009965 70 DRVLKINISGSSLKG------FLAPELGLLTYLQELILHGNNLIGIIPKELGLLKR---LKILDLGTNQLTG----PIPP 136 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~------~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~Ls~N~l~g----~~p~ 136 (521)
..++.|+++++.+.+ .++..+..+++|+.|+|++|.+.+..+..+..+.+ |++|++++|++++ .+..
T Consensus 51 ~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~ 130 (319)
T cd00116 51 PSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAK 130 (319)
T ss_pred CCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHH
Confidence 458899999888863 23456778889999999999998766666666655 9999999999873 3334
Q ss_pred ccCCC-ccCceeecccccCccc----CchhhhCCCCCCEEeCCCCCCCccCCCCCCC--cccccccccccccCCcCc---
Q 009965 137 EIGNL-TGLVKINLQSNGLTGR----LPAELGNLISLEELHLDRNRLQGAVPAGSNS--GYTANIHGMYASSANLTG--- 206 (521)
Q Consensus 137 ~~~~l-~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~--~~~~~l~~l~l~~n~l~~--- 206 (521)
.+..+ ++|+.|+|++|.+++. ++..+..+++|+.|++++|.+++........ ....++..+++++|.+++
T Consensus 131 ~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~ 210 (319)
T cd00116 131 GLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGA 210 (319)
T ss_pred HHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHH
Confidence 55666 8999999999999843 3445677889999999999988521110000 001367788888888753
Q ss_pred ------ccCCCCCCEEeccCCccccCCc----cc----cccCCCcccCCCcCCC
Q 009965 207 ------LCHLSQLKVADFSYNFFVGSIP----KC----LEYLPSTSFQGNCLQN 246 (521)
Q Consensus 207 ------~~~l~~L~~L~ls~N~l~g~ip----~~----l~~l~~l~~~~N~l~~ 246 (521)
+..+++|++|++++|.+++..+ .. ...|+++++.+|.++.
T Consensus 211 ~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~ 264 (319)
T cd00116 211 SALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITD 264 (319)
T ss_pred HHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCc
Confidence 3457889999999999875322 22 2578889999997763
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.3e-12 Score=138.37 Aligned_cols=173 Identities=28% Similarity=0.375 Sum_probs=138.9
Q ss_pred CCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceee
Q 009965 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
..+++.|+.++|.++...+ -..-.+|+++++++|+++ .+|+.++.+.+|+.|+..+|+|+ .+|..+..+++|+.|.
T Consensus 218 g~~l~~L~a~~n~l~~~~~--~p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~ 293 (1081)
T KOG0618|consen 218 GPSLTALYADHNPLTTLDV--HPVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLS 293 (1081)
T ss_pred CcchheeeeccCcceeecc--ccccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHH
Confidence 3578888888898884332 234568999999999999 46799999999999999999997 8999999999999999
Q ss_pred cccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcc------------------------cccccccccccCCc
Q 009965 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGY------------------------TANIHGMYASSANL 204 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~------------------------~~~l~~l~l~~n~l 204 (521)
+..|.++ -+|+....++.|++|+|..|+|. .+|+...... ...+..+++.+|.+
T Consensus 294 ~~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~L 371 (1081)
T KOG0618|consen 294 AAYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHL 371 (1081)
T ss_pred hhhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcc
Confidence 9999999 78888999999999999999997 6665321100 11244567777777
Q ss_pred Cc-----ccCCCCCCEEeccCCccccCCccc----cccCCCcccCCCcCCCCC
Q 009965 205 TG-----LCHLSQLKVADFSYNFFVGSIPKC----LEYLPSTSFQGNCLQNKD 248 (521)
Q Consensus 205 ~~-----~~~l~~L~~L~ls~N~l~g~ip~~----l~~l~~l~~~~N~l~~~~ 248 (521)
+. +....+|+.|+|+||+|. .+|.. +..|+.|.++||+++.+.
T Consensus 372 td~c~p~l~~~~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~~Lp 423 (1081)
T KOG0618|consen 372 TDSCFPVLVNFKHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLTTLP 423 (1081)
T ss_pred cccchhhhccccceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhhhhh
Confidence 64 456789999999999998 77743 456778999999888764
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.2e-10 Score=135.01 Aligned_cols=110 Identities=26% Similarity=0.347 Sum_probs=64.8
Q ss_pred CEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecc
Q 009965 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
+++.|+|++|.+.. ++..+..+++|+.|+|++|...+.+|. +..+++|+.|+|++|.....+|..++++++|+.|+++
T Consensus 612 ~L~~L~L~~s~l~~-L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~ 689 (1153)
T PLN03210 612 NLVKLQMQGSKLEK-LWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMS 689 (1153)
T ss_pred CCcEEECcCccccc-cccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCC
Confidence 45666666666553 455566666666666666554445553 5666666666666665555666666666666666666
Q ss_pred cccCcccCchhhhCCCCCCEEeCCCCCCCccCC
Q 009965 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p 183 (521)
+|..-+.+|..+ ++++|+.|+|++|...+.+|
T Consensus 690 ~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p 721 (1153)
T PLN03210 690 RCENLEILPTGI-NLKSLYRLNLSGCSRLKSFP 721 (1153)
T ss_pred CCCCcCccCCcC-CCCCCCEEeCCCCCCccccc
Confidence 654334555544 55566666666554333333
|
syringae 6; Provisional |
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.5e-10 Score=134.30 Aligned_cols=112 Identities=23% Similarity=0.375 Sum_probs=78.0
Q ss_pred ccceeeCCCCCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccC
Q 009965 60 WTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIG 139 (521)
Q Consensus 60 w~gv~C~~~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 139 (521)
|.|+.+ ..+++.|+|+++...+.+| .++.+++|++|+|++|.....+|.++..+++|+.|++++|..-+.+|..+
T Consensus 627 ~~~~~~---l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i- 701 (1153)
T PLN03210 627 WDGVHS---LTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI- 701 (1153)
T ss_pred cccccc---CCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-
Confidence 556543 3478888888876555565 47888888888888887667788888888888888888865545777665
Q ss_pred CCccCceeecccccCcccCchhhhCCCCCCEEeCCCCCCC
Q 009965 140 NLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179 (521)
Q Consensus 140 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 179 (521)
++++|+.|+|++|...+.+|.. .++|++|+|++|.+.
T Consensus 702 ~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~ 738 (1153)
T PLN03210 702 NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE 738 (1153)
T ss_pred CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc
Confidence 6777777777776554455432 245566666666554
|
syringae 6; Provisional |
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.1e-10 Score=107.06 Aligned_cols=147 Identities=18% Similarity=0.116 Sum_probs=111.3
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCC--CCccceeeEEecCC-CCceEEEEe
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH--ENTGKLLGYCRESS-PFTRMLVFD 440 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~g~~~~~~-~~~~~lv~e 440 (521)
+.++.|.++.||+++..+|..+++|........ .....+.+|.+++..+++ .++.+++.+..... ....++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~---~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL---PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccC---cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 458899999999999877778999986432211 123467899999999976 44577777775432 014589999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--------------------------------------
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL-------------------------------------- 482 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-------------------------------------- 482 (521)
|++++++.+.+.. ..++..++..++.+++++|++||+..
T Consensus 81 ~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 81 RVDGRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred EeCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 9999888876532 24788888899999999999999531
Q ss_pred ---------------CCCeEecCCCCCCeeecC--CCCeeeCCCchhhhcc
Q 009965 483 ---------------GPPFTISELNSSAVYLTE--DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 483 ---------------~~~ivH~Dlk~~NiLld~--~~~~kl~DfGla~~~~ 516 (521)
...++|+|+.+.||++++ +..+.|.||+.+..-+
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g~ 208 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLGD 208 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccCC
Confidence 246799999999999998 6678999999887543
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.13 E-value=3.1e-10 Score=109.37 Aligned_cols=149 Identities=17% Similarity=0.189 Sum_probs=97.5
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCC----------CCccceeeEEecC-C
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH----------ENTGKLLGYCRES-S 431 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H----------~niv~l~g~~~~~-~ 431 (521)
..||.|+++.||.++.. +++++|+|...... .......+++.+|.-....+.+ -.++-.++...-. .
T Consensus 18 ~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~-~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~ 96 (288)
T PF14531_consen 18 RIIGKGGFSIVFEVTDVETGEEFAVKVFLLPA-DASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGK 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEEEESS-TTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS
T ss_pred cccccCCceEEEEEEEccCCceEEEEEEeccc-ccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCC
Confidence 68999999999999997 68999999986655 3333345667777755555432 2222222222111 0
Q ss_pred -------C----C---ceEEEEecCCCCChhhhhc---cC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCC
Q 009965 432 -------P----F---TRMLVFDYASNGTLYEHLH---YG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELN 492 (521)
Q Consensus 432 -------~----~---~~~lv~ey~~~gsL~~~l~---~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk 492 (521)
+ . ..+++|+-+. +||.+++. .. ....+....|+.+..|+++.+++||+. ++||+|||
T Consensus 97 ~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHgdi~ 172 (288)
T PF14531_consen 97 PPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHGDIK 172 (288)
T ss_dssp -SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEEST-S
T ss_pred CcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEecccc
Confidence 0 0 2356777775 48888754 11 122355667788889999999999999 99999999
Q ss_pred CCCeeecCCCCeeeCCCchhhhccc
Q 009965 493 SSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 493 ~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
|+|++++++|.++|+||+.....+.
T Consensus 173 ~~nfll~~~G~v~Lg~F~~~~r~g~ 197 (288)
T PF14531_consen 173 PENFLLDQDGGVFLGDFSSLVRAGT 197 (288)
T ss_dssp GGGEEE-TTS-EEE--GGGEEETTE
T ss_pred eeeEEEcCCCCEEEcChHHHeecCc
Confidence 9999999999999999987665443
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.6e-12 Score=128.49 Aligned_cols=147 Identities=28% Similarity=0.404 Sum_probs=126.2
Q ss_pred EEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeeccc
Q 009965 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151 (521)
Q Consensus 72 l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 151 (521)
|..+.|..|.+.- +|+.+.+|..|++|||+.|+++ .+|..++.|+ |+.|-+++|+++ .+|+.++.+..|..||.+.
T Consensus 100 Le~liLy~n~~r~-ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~ 175 (722)
T KOG0532|consen 100 LESLILYHNCIRT-IPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSK 175 (722)
T ss_pred HHHHHHHhcccee-cchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhh
Confidence 5667777888764 8889999999999999999998 7888888886 999999999998 8999999889999999999
Q ss_pred ccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCc----ccCCCCCCEEeccCCccccCC
Q 009965 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG----LCHLSQLKVADFSYNFFVGSI 227 (521)
Q Consensus 152 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~----~~~l~~L~~L~ls~N~l~g~i 227 (521)
|.+. .+|..++.+.+|+.|.+..|++. .+|..... ..|..++++.|+++. |.+|+.|++|.|.+|.|. +.
T Consensus 176 nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~---LpLi~lDfScNkis~iPv~fr~m~~Lq~l~LenNPLq-SP 249 (722)
T KOG0532|consen 176 NEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCS---LPLIRLDFSCNKISYLPVDFRKMRHLQVLQLENNPLQ-SP 249 (722)
T ss_pred hhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhC---CceeeeecccCceeecchhhhhhhhheeeeeccCCCC-CC
Confidence 9998 78999999999999999999998 66765543 567888999999875 578999999999999997 44
Q ss_pred c
Q 009965 228 P 228 (521)
Q Consensus 228 p 228 (521)
|
T Consensus 250 P 250 (722)
T KOG0532|consen 250 P 250 (722)
T ss_pred h
Confidence 4
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.09 E-value=9e-11 Score=121.11 Aligned_cols=169 Identities=31% Similarity=0.488 Sum_probs=96.5
Q ss_pred CEEEEEecCCCCCccCCccccCCC-CCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 71 RVLKINISGSSLKGFLAPELGLLT-YLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.++.|++.+|.++. +++....+. +|+.|++++|++. .+|..+..+++|+.|++++|+++ .+|...+.+++|+.|++
T Consensus 117 ~l~~L~l~~n~i~~-i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~l 193 (394)
T COG4886 117 NLTSLDLDNNNITD-IPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDL 193 (394)
T ss_pred ceeEEecCCccccc-Cccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheec
Confidence 45666666666655 444555553 6666666666665 44455666666666666666666 55555556666666666
Q ss_pred ccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcC----cccCCCCCCEEeccCCcccc
Q 009965 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT----GLCHLSQLKVADFSYNFFVG 225 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~----~~~~l~~L~~L~ls~N~l~g 225 (521)
++|+++ .+|..+..+..|++|.+++|.+. .++..... ..++..+.+..|.+. .+..+++++.|++++|+++
T Consensus 194 s~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~--~~~l~~l~l~~n~~~~~~~~~~~l~~l~~L~~s~n~i~- 268 (394)
T COG4886 194 SGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSN--LKNLSGLELSNNKLEDLPESIGNLSNLETLDLSNNQIS- 268 (394)
T ss_pred cCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhh--cccccccccCCceeeeccchhccccccceecccccccc-
Confidence 666666 56655555555666666666422 12211110 123344445555543 3445666777777777776
Q ss_pred CCcc--ccccCCCcccCCCcCCCC
Q 009965 226 SIPK--CLEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 226 ~ip~--~l~~l~~l~~~~N~l~~~ 247 (521)
.++. .+.++..+++++|.+...
T Consensus 269 ~i~~~~~~~~l~~L~~s~n~~~~~ 292 (394)
T COG4886 269 SISSLGSLTNLRELDLSGNSLSNA 292 (394)
T ss_pred ccccccccCccCEEeccCcccccc
Confidence 3332 335566677777765554
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.3e-10 Score=104.23 Aligned_cols=112 Identities=31% Similarity=0.476 Sum_probs=37.8
Q ss_pred cccCCCCCCEEECcCCcccccCCcccc-CCCCCcEEEccCCcCCCCCCcccCCCccCceeecccccCcccCchhh-hCCC
Q 009965 89 ELGLLTYLQELILHGNNLIGIIPKELG-LLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAEL-GNLI 166 (521)
Q Consensus 89 ~l~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~-~~l~ 166 (521)
.+.+...+++|+|++|.|+. + +.++ .+.+|+.||||+|.++ .++ .+..++.|+.|++++|+++ .+++.+ ..++
T Consensus 14 ~~~n~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp 88 (175)
T PF14580_consen 14 QYNNPVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLP 88 (175)
T ss_dssp ------------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-T
T ss_pred cccccccccccccccccccc-c-cchhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC-ccccchHHhCC
Confidence 34556678888888888874 3 2455 5778888888888887 343 5777888888888888888 454444 4688
Q ss_pred CCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcccCCCCCCEEeccCCcccc
Q 009965 167 SLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVG 225 (521)
Q Consensus 167 ~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g 225 (521)
+|++|+|++|++.. +. .+..+..+++|+.|++.+|.++.
T Consensus 89 ~L~~L~L~~N~I~~-l~-------------------~l~~L~~l~~L~~L~L~~NPv~~ 127 (175)
T PF14580_consen 89 NLQELYLSNNKISD-LN-------------------ELEPLSSLPKLRVLSLEGNPVCE 127 (175)
T ss_dssp T--EEE-TTS---S-CC-------------------CCGGGGG-TT--EEE-TT-GGGG
T ss_pred cCCEEECcCCcCCC-hH-------------------HhHHHHcCCCcceeeccCCcccc
Confidence 88888888888862 21 11234567788888888888763
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.06 E-value=4e-11 Score=129.29 Aligned_cols=140 Identities=14% Similarity=0.083 Sum_probs=110.2
Q ss_pred hchhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
.+.+|+++|=+|.||+.+.|. |+||.+..+.....-..-.+-.+|++ ...++|||.+++.-+-..+. ..|||=+|.
T Consensus 28 ~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~k--AAylvRqyv 103 (1431)
T KOG1240|consen 28 VENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDK--AAYLVRQYV 103 (1431)
T ss_pred ecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhH--HHHHHHHHH
Confidence 478999999999999998886 88888865543322222222334444 55669999999877766655 678999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchh
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla 512 (521)
.+ +|+|.+..+. -+...+..=|+.|+..|+.-+|.. +|.|||||.+||||+.-.-+.|+||.--
T Consensus 104 kh-nLyDRlSTRP--FL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsF 167 (1431)
T KOG1240|consen 104 KH-NLYDRLSTRP--FLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASF 167 (1431)
T ss_pred hh-hhhhhhccch--HHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhccccc
Confidence 88 9999995433 366677777999999999999999 9999999999999999999999999743
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.2e-10 Score=117.49 Aligned_cols=99 Identities=25% Similarity=0.494 Sum_probs=89.7
Q ss_pred HhccCCCCccceeeEEecCCCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCe-EecC
Q 009965 412 LARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPF-TISE 490 (521)
Q Consensus 412 l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i-vH~D 490 (521)
|+.+.|.|+.+++|.+.+.. ..++|.+|++.|+|.|.+.. ....++|.-...+.++|++||+|+|+. +| .|+.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~--~~~~i~~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~ 74 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGP--EMIVIWEYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGA 74 (484)
T ss_pred CcccchhhhhhheeeEecCC--ceEEEEeeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHhcC---cceeeee
Confidence 35678999999999999886 89999999999999999964 445699999999999999999999987 44 9999
Q ss_pred CCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 491 LNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 491 lk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++++|+++|..+.+||+|||+..+..
T Consensus 75 l~s~nClvd~~w~lklt~~Gl~~~~~ 100 (484)
T KOG1023|consen 75 LKSSNCLVDSRWVLKLTDFGLNSLLE 100 (484)
T ss_pred eccccceeeeeEEEEechhhhccccc
Confidence 99999999999999999999988774
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.1e-10 Score=111.23 Aligned_cols=90 Identities=22% Similarity=0.212 Sum_probs=72.3
Q ss_pred CCCCccceeeEEecCC-------------------------CCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHH
Q 009965 416 NHENTGKLLGYCRESS-------------------------PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIG 470 (521)
Q Consensus 416 ~H~niv~l~g~~~~~~-------------------------~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ 470 (521)
+|||||++.++|.++- +...|+||.-++. +|++++..+. .+..++.-|..|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~---~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH---RSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC---CchHHHHHHHHH
Confidence 6899988888775421 2257899998877 9999997544 455667778899
Q ss_pred HHHHHHHHhcCCCCCeEecCCCCCCeee--cCCC--CeeeCCCchh
Q 009965 471 IARGLKYLHTELGPPFTISELNSSAVYL--TEDF--SPKVSPLCLS 512 (521)
Q Consensus 471 ia~gL~yLH~~~~~~ivH~Dlk~~NiLl--d~~~--~~kl~DfGla 512 (521)
+.+|+.|||.+ +|.|||+|+.|||+ |+|. ...|+|||.+
T Consensus 350 lLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCc 392 (598)
T KOG4158|consen 350 LLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCC 392 (598)
T ss_pred HHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEccccee
Confidence 99999999999 99999999999998 5555 4589999964
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.5e-10 Score=102.35 Aligned_cols=104 Identities=29% Similarity=0.417 Sum_probs=43.2
Q ss_pred CEEEEEecCCCCCccCCcccc-CCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCccc-CCCccCceee
Q 009965 71 RVLKINISGSSLKGFLAPELG-LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKIN 148 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~~L~ 148 (521)
+++.|+|.+|.|+.. +.++ .+++|+.|+|++|.|+. ++ .+..++.|++|++++|+++ .+++.+ ..+++|+.|+
T Consensus 20 ~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 20 KLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQELY 94 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT--EEE
T ss_pred ccccccccccccccc--cchhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCC-ccccchHHhCCcCCEEE
Confidence 578999999999863 3566 68999999999999995 43 4888999999999999999 555555 4689999999
Q ss_pred cccccCcccC-chhhhCCCCCCEEeCCCCCCC
Q 009965 149 LQSNGLTGRL-PAELGNLISLEELHLDRNRLQ 179 (521)
Q Consensus 149 Ls~N~l~g~~-p~~~~~l~~L~~L~Ls~N~l~ 179 (521)
|++|++...- =..+..+++|+.|+|.+|.++
T Consensus 95 L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 95 LSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp -TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred CcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 9999998421 145778999999999999987
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=99.01 E-value=3.1e-09 Score=96.75 Aligned_cols=129 Identities=15% Similarity=0.197 Sum_probs=84.3
Q ss_pred eEEEEEeCCCCEEEEEEeeeecc----------------------ccchhhHHHHHHHHHHHhccCCC--CccceeeEEe
Q 009965 373 LVYKGTMKGGPEIAVISLCIKEE----------------------HWTGYLELYFQREVADLARINHE--NTGKLLGYCR 428 (521)
Q Consensus 373 ~Vy~~~~~~~~~vavk~~~~~~~----------------------~~~~~~~~~~~~E~~~l~~l~H~--niv~l~g~~~ 428 (521)
.||.|...+|..+|||+...... .+.........+|.+.|.++..- ++.+++.+.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 48999999999999998753310 11112345678999999999766 455665443
Q ss_pred cCCCCceEEEEecCC--CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHH-hcCCCCCeEecCCCCCCeeecCCCCee
Q 009965 429 ESSPFTRMLVFDYAS--NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL-HTELGPPFTISELNSSAVYLTEDFSPK 505 (521)
Q Consensus 429 ~~~~~~~~lv~ey~~--~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ivH~Dlk~~NiLld~~~~~k 505 (521)
..+|||||++ +..+..+.. .. ++......+..++...+..+ |.. +|+|+|+.+.|||++++ .+.
T Consensus 80 -----~~~ivME~I~~~G~~~~~l~~-~~---~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~ 146 (188)
T PF01163_consen 80 -----RNVIVMEYIGEDGVPLPRLKD-VD---LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVY 146 (188)
T ss_dssp -----TTEEEEE--EETTEEGGCHHH-CG---GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEE
T ss_pred -----CCEEEEEecCCCccchhhHHh-cc---ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEE
Confidence 3479999998 544544332 11 11334566778888866665 676 99999999999999987 999
Q ss_pred eCCCchhhhc
Q 009965 506 VSPLCLSFLL 515 (521)
Q Consensus 506 l~DfGla~~~ 515 (521)
|+|||.+...
T Consensus 147 iIDf~qav~~ 156 (188)
T PF01163_consen 147 IIDFGQAVDS 156 (188)
T ss_dssp E--GTTEEET
T ss_pred EEecCcceec
Confidence 9999987543
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.01 E-value=8.4e-11 Score=120.70 Aligned_cols=144 Identities=17% Similarity=0.099 Sum_probs=115.0
Q ss_pred hhCcCCCeeEEEEEe----CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCCccceeeEEecCCCCceEEEE
Q 009965 365 IIGSSPDSLVYKGTM----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 365 ~ig~G~~g~Vy~~~~----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
++|+|.||.|+.++- +.|..+|+|.+..+...... +.....|..++..++ ||.+|++.-.+..+. ..+++.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~--~~~t~~er~il~~~~~~~f~v~lhyafqt~~--kl~l~l 76 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRD--RTHTKQERIILAFVHNTPFLVKLHYAFQTDG--KLYLIL 76 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccc--ccccccHHHHHhhccCCCceeeeeeeecccc--chhHhh
Confidence 378999999987642 34667888887554422111 114566778888886 999999988887776 789999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
+|..+|.+...+... ..++......+...+|-+++++|.. +|+|||+|++||++|.+|.+++.|||+++...+
T Consensus 77 d~~rgg~lft~l~~~--~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~ 149 (612)
T KOG0603|consen 77 DFLRGGDLFTRLSKE--VMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVK 149 (612)
T ss_pred hhcccchhhhccccC--CchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHh
Confidence 999999998877533 3466777777788899999999999 999999999999999999999999999998754
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.99 E-value=5.9e-11 Score=111.02 Aligned_cols=123 Identities=24% Similarity=0.251 Sum_probs=61.7
Q ss_pred CCcEEEccCCcCCCCCCcccCCCccCceeecccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccc
Q 009965 119 RLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMY 198 (521)
Q Consensus 119 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~ 198 (521)
.|+.||||+|.++ .+.++..-++.++.|++|+|.+. .+. .+..|++|+.||||+|.++ .+-..... ..++..+.
T Consensus 285 ~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh~K--LGNIKtL~ 358 (490)
T KOG1259|consen 285 ELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQ-NLAELPQLQLLDLSGNLLA-ECVGWHLK--LGNIKTLK 358 (490)
T ss_pred hhhhccccccchh-hhhhhhhhccceeEEecccccee-eeh-hhhhcccceEeecccchhH-hhhhhHhh--hcCEeeee
Confidence 3444555555444 44444444445555555555444 221 2444455555555555444 11111100 12334444
Q ss_pred cccCCc---CcccCCCCCCEEeccCCccccCCc-cccccC---CCcccCCCcCCCC
Q 009965 199 ASSANL---TGLCHLSQLKVADFSYNFFVGSIP-KCLEYL---PSTSFQGNCLQNK 247 (521)
Q Consensus 199 l~~n~l---~~~~~l~~L~~L~ls~N~l~g~ip-~~l~~l---~~l~~~~N~l~~~ 247 (521)
++.|.+ +|+..+-+|..||+++|++...-- ..+++| +.+.+.+|++...
T Consensus 359 La~N~iE~LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~ 414 (490)
T KOG1259|consen 359 LAQNKIETLSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGS 414 (490)
T ss_pred hhhhhHhhhhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcccc
Confidence 444443 456667788999999998852111 234444 4567888877664
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.95 E-value=4.4e-10 Score=82.85 Aligned_cols=58 Identities=36% Similarity=0.492 Sum_probs=24.9
Q ss_pred CCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeeccccc
Q 009965 96 LQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNG 153 (521)
Q Consensus 96 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 153 (521)
|++|+|++|+++...+..|..+++|++|++++|.++...|..|.++++|++|++++|+
T Consensus 3 L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 3 LESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp ESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred CcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 4444444444443333344444444444444444443333344444444444444443
|
... |
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.95 E-value=4.1e-10 Score=83.03 Aligned_cols=61 Identities=38% Similarity=0.508 Sum_probs=56.7
Q ss_pred CCCcEEEccCCcCCCCCCcccCCCccCceeecccccCcccCchhhhCCCCCCEEeCCCCCC
Q 009965 118 KRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRL 178 (521)
Q Consensus 118 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 178 (521)
++|++|++++|+++...+..|.++++|++|++++|+++...|..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 5799999999999976668999999999999999999988888999999999999999985
|
... |
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=9.3e-09 Score=99.28 Aligned_cols=147 Identities=10% Similarity=0.005 Sum_probs=101.3
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccc--cc-----hhhHHHHHHHHHHHhccCCCCc--cceeeEEecCC---
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEH--WT-----GYLELYFQREVADLARINHENT--GKLLGYCRESS--- 431 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~--~~-----~~~~~~~~~E~~~l~~l~H~ni--v~l~g~~~~~~--- 431 (521)
+++-.-....|++..+ +|+.+.||+....... .. ......+.+|...+.++...+| .++++|.....
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 3444444455777766 5678999976322100 00 0111247899999988854444 44566664321
Q ss_pred CCceEEEEecCCCC-ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC-------CCC
Q 009965 432 PFTRMLVFDYASNG-TLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-------DFS 503 (521)
Q Consensus 432 ~~~~~lv~ey~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~-------~~~ 503 (521)
....++|+|++++- +|.+++......+.+...+..++.++++.++-||.. +|+|+|++++|||++. +..
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~~ 183 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDLK 183 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCce
Confidence 12478999999975 899988532223355667789999999999999999 9999999999999985 468
Q ss_pred eeeCCCchhhh
Q 009965 504 PKVSPLCLSFL 514 (521)
Q Consensus 504 ~kl~DfGla~~ 514 (521)
+.++||+.++.
T Consensus 184 ~~LIDl~r~~~ 194 (268)
T PRK15123 184 LSVIDLHRAQI 194 (268)
T ss_pred EEEEECCcccc
Confidence 99999998854
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.93 E-value=9.3e-11 Score=109.73 Aligned_cols=137 Identities=21% Similarity=0.250 Sum_probs=100.3
Q ss_pred CccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecccccCcccCchhh
Q 009965 83 KGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAEL 162 (521)
Q Consensus 83 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~ 162 (521)
+|..-..+.....|++||||+|.|+ .+..+..-++.++.|++|+|.+. .+. .+..|++|+.||||+|.++ .+..+-
T Consensus 273 ~G~~~~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh 348 (490)
T KOG1259|consen 273 NGSALVSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQ-NLAELPQLQLLDLSGNLLA-ECVGWH 348 (490)
T ss_pred CCceEEecchHhhhhhccccccchh-hhhhhhhhccceeEEecccccee-eeh-hhhhcccceEeecccchhH-hhhhhH
Confidence 3444445566677888888888887 67777777888888888888886 333 3777888888888888888 566666
Q ss_pred hCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcC------cccCCCCCCEEeccCCccccCC
Q 009965 163 GNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT------GLCHLSQLKVADFSYNFFVGSI 227 (521)
Q Consensus 163 ~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~------~~~~l~~L~~L~ls~N~l~g~i 227 (521)
..|-+.+.|.|+.|.+. .+.. . .....+..+++++|++. ++.+++-|+.+.|.+|.+.+.+
T Consensus 349 ~KLGNIKtL~La~N~iE-~LSG-L--~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 349 LKLGNIKTLKLAQNKIE-TLSG-L--RKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred hhhcCEeeeehhhhhHh-hhhh-h--HhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 77788888888888775 2211 1 11245667788888875 4677899999999999998543
|
|
| >PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape [] | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.8e-09 Score=73.07 Aligned_cols=41 Identities=41% Similarity=0.943 Sum_probs=30.9
Q ss_pred hhHHHHHHHHHHhcccCCCCCCCCCCCCC-CCCCCccceeeC
Q 009965 26 TNEFWALTTFKEAIYEDPHLVLSNWNALD-ADPCHWTGIACS 66 (521)
Q Consensus 26 ~~~~~~L~~~k~~~~~~~~~~l~~W~~~~-~~~c~w~gv~C~ 66 (521)
++|++||++||+++..+|...+.+|+... .+||+|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 57999999999999867777899998763 799999999995
|
LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A. |
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.4e-09 Score=112.15 Aligned_cols=153 Identities=29% Similarity=0.453 Sum_probs=128.0
Q ss_pred CEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecc
Q 009965 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
+++.|++++|.+.. +|..+..++.|+.|++++|+++ .+|...+.+++|+.|++++|+++ .+|..+..+..|+.|+++
T Consensus 141 nL~~L~l~~N~i~~-l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~ 217 (394)
T COG4886 141 NLKELDLSDNKIES-LPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLS 217 (394)
T ss_pred hcccccccccchhh-hhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhc
Confidence 79999999999986 5677999999999999999999 67777778999999999999999 888887777889999999
Q ss_pred cccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc---cCCCCCCEEeccCCccccCC
Q 009965 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGSI 227 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~---~~l~~L~~L~ls~N~l~g~i 227 (521)
+|.+. .++..+.++.++..|.+.+|++.. ++..... ...+..++++.|.++.+ ..+.+|+.|++++|.+....
T Consensus 218 ~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~-~~~~~~~--l~~l~~L~~s~n~i~~i~~~~~~~~l~~L~~s~n~~~~~~ 293 (394)
T COG4886 218 NNSII-ELLSSLSNLKNLSGLELSNNKLED-LPESIGN--LSNLETLDLSNNQISSISSLGSLTNLRELDLSGNSLSNAL 293 (394)
T ss_pred CCcce-ecchhhhhcccccccccCCceeee-ccchhcc--ccccceeccccccccccccccccCccCEEeccCccccccc
Confidence 99755 577889999999999999999873 2332211 23578889999988764 46789999999999999776
Q ss_pred ccc
Q 009965 228 PKC 230 (521)
Q Consensus 228 p~~ 230 (521)
|..
T Consensus 294 ~~~ 296 (394)
T COG4886 294 PLI 296 (394)
T ss_pred hhh
Confidence 644
|
|
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.78 E-value=4.5e-08 Score=91.81 Aligned_cols=135 Identities=20% Similarity=0.207 Sum_probs=94.9
Q ss_pred hhchhCcCCCeeEEEEEeCCCCEEEEEEeeeec------------------cccchhhHHHHHHHHHHHhccCCC--Ccc
Q 009965 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKE------------------EHWTGYLELYFQREVADLARINHE--NTG 421 (521)
Q Consensus 362 ~~~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~------------------~~~~~~~~~~~~~E~~~l~~l~H~--niv 421 (521)
+++.||-|--+.||.|..+.|.++|||.=.... ..|.-..+....+|.++|.++.-. .|.
T Consensus 95 iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~VP 174 (304)
T COG0478 95 IGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKVP 174 (304)
T ss_pred hccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCCC
Confidence 458899999999999999999999999732211 112222355678899999999654 677
Q ss_pred ceeeEEecCCCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCC
Q 009965 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED 501 (521)
Q Consensus 422 ~l~g~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~ 501 (521)
+.+++- ...+||||+++-.|...- ++....-.|...|.+-+.-.-.. ++||+|+.+-||++++|
T Consensus 175 ~P~~~n------RHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~~d 238 (304)
T COG0478 175 KPIAWN------RHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVTED 238 (304)
T ss_pred Cccccc------cceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEecC
Confidence 766553 468999999985554332 11222233444444433333345 99999999999999999
Q ss_pred CCeeeCCCchh
Q 009965 502 FSPKVSPLCLS 512 (521)
Q Consensus 502 ~~~kl~DfGla 512 (521)
|.+.++||=-+
T Consensus 239 g~~~vIDwPQ~ 249 (304)
T COG0478 239 GDIVVIDWPQA 249 (304)
T ss_pred CCEEEEeCccc
Confidence 99999999644
|
|
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.1e-07 Score=87.26 Aligned_cols=143 Identities=13% Similarity=0.035 Sum_probs=104.4
Q ss_pred hCcCCCeeEEEEEeCCCCEEEEEEeee-eccccc-hhhHHHHHHHHHHHhccCC--CCccceeeEEe-c--CCCCceEEE
Q 009965 366 IGSSPDSLVYKGTMKGGPEIAVISLCI-KEEHWT-GYLELYFQREVADLARINH--ENTGKLLGYCR-E--SSPFTRMLV 438 (521)
Q Consensus 366 ig~G~~g~Vy~~~~~~~~~vavk~~~~-~~~~~~-~~~~~~~~~E~~~l~~l~H--~niv~l~g~~~-~--~~~~~~~lv 438 (521)
-|+|+-+-|++-.+.+. .+-+|+-.. -...+. +..+..|.+|+..+.++.. -.+.++. ++. . ......+||
T Consensus 26 ~~rgG~SgV~r~~~~g~-~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERNGK-KLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeCCc-EEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 46688888999877554 577777531 111111 3346789999999999953 3344444 332 1 222257899
Q ss_pred EecCCC-CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCC--eeeCCCchhh
Q 009965 439 FDYASN-GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS--PKVSPLCLSF 513 (521)
Q Consensus 439 ~ey~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~--~kl~DfGla~ 513 (521)
+|-+++ -+|.+++......+.+...+..+..++++.++-||+. ++.|+|+.+.||+++.++. +++.||--++
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 998874 4899998654444567888899999999999999999 9999999999999986666 9999997655
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.1e-09 Score=106.21 Aligned_cols=148 Identities=24% Similarity=0.323 Sum_probs=106.8
Q ss_pred EEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeeccc-cc
Q 009965 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS-NG 153 (521)
Q Consensus 75 L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~-N~ 153 (521)
++-++-+|+. +|..+- ..-..++|..|+|+.+.|.+|..+++|+.||||+|+|+.+-|..|.++.+|..|-+.+ |+
T Consensus 51 VdCr~~GL~e-VP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~Nk 127 (498)
T KOG4237|consen 51 VDCRGKGLTE-VPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNK 127 (498)
T ss_pred EEccCCCccc-CcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCc
Confidence 3444555554 554432 4567899999999988899999999999999999999999999999999988877766 99
Q ss_pred CcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcccCCCCCCEEeccCCccccCCcc-cc-
Q 009965 154 LTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPK-CL- 231 (521)
Q Consensus 154 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~ip~-~l- 231 (521)
|+...-..|++|.+|+.|.+.-|++. .++.. .+..+++|..|.+-+|.+. .++. .+
T Consensus 128 I~~l~k~~F~gL~slqrLllNan~i~-Cir~~--------------------al~dL~~l~lLslyDn~~q-~i~~~tf~ 185 (498)
T KOG4237|consen 128 ITDLPKGAFGGLSSLQRLLLNANHIN-CIRQD--------------------ALRDLPSLSLLSLYDNKIQ-SICKGTFQ 185 (498)
T ss_pred hhhhhhhHhhhHHHHHHHhcChhhhc-chhHH--------------------HHHHhhhcchhcccchhhh-hhcccccc
Confidence 99666678999999999999999998 44432 2334555556666666655 3443 22
Q ss_pred --ccCCCcccCCCcCCCC
Q 009965 232 --EYLPSTSFQGNCLQNK 247 (521)
Q Consensus 232 --~~l~~l~~~~N~l~~~ 247 (521)
..++.+.+.-|.+-+.
T Consensus 186 ~l~~i~tlhlA~np~icd 203 (498)
T KOG4237|consen 186 GLAAIKTLHLAQNPFICD 203 (498)
T ss_pred chhccchHhhhcCccccc
Confidence 2334445555544443
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.69 E-value=3.3e-09 Score=104.36 Aligned_cols=172 Identities=21% Similarity=0.222 Sum_probs=96.5
Q ss_pred CEEEEEecCCCCCccCC--ccccCCCCCCEEECcCCcccccCC--ccccCCCCCcEEEccCCcCCCCCCccc-CCCccCc
Q 009965 71 RVLKINISGSSLKGFLA--PELGLLTYLQELILHGNNLIGIIP--KELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLV 145 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p--~~l~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~ 145 (521)
+++.+.|.+....- .+ .....|++++.|||+.|-|....| .-...|++|+.|+||.|++.-...+.. ..++.|+
T Consensus 122 kL~~IsLdn~~V~~-~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK 200 (505)
T KOG3207|consen 122 KLREISLDNYRVED-AGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLK 200 (505)
T ss_pred hhhheeecCccccc-cchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhh
Confidence 45666666655542 22 345667777778887777764433 234567777777887777753222211 2456777
Q ss_pred eeecccccCccc-CchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc------cCCCCCCEEec
Q 009965 146 KINLQSNGLTGR-LPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL------CHLSQLKVADF 218 (521)
Q Consensus 146 ~L~Ls~N~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~------~~l~~L~~L~l 218 (521)
.|.|+.|.|+-. +-.....+|+|+.|+|..|...+. ..........++.++|++|++-.+ ..++.|..|++
T Consensus 201 ~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~--~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnl 278 (505)
T KOG3207|consen 201 QLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILI--KATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNL 278 (505)
T ss_pred eEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccce--ecchhhhhhHHhhccccCCcccccccccccccccchhhhhc
Confidence 777777777621 122234567777777777742111 111111123556667777766543 34666777777
Q ss_pred cCCccccC-Cccc--------cccCCCcccCCCcCC
Q 009965 219 SYNFFVGS-IPKC--------LEYLPSTSFQGNCLQ 245 (521)
Q Consensus 219 s~N~l~g~-ip~~--------l~~l~~l~~~~N~l~ 245 (521)
+.+.+... +|++ +.+++.|....|++.
T Consensus 279 s~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~ 314 (505)
T KOG3207|consen 279 SSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR 314 (505)
T ss_pred cccCcchhcCCCccchhhhcccccceeeecccCccc
Confidence 77666422 2322 455666667777553
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.62 E-value=8.1e-09 Score=110.72 Aligned_cols=146 Identities=18% Similarity=0.217 Sum_probs=113.7
Q ss_pred chhCcCCCeeEEEEEeCC--CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCCccceeeEEecCCCCceEEEEe
Q 009965 364 NIIGSSPDSLVYKGTMKG--GPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~--~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
.-||+|+|+.|-...... ...+|+|.+.... ...........|..+-..+. |+|++.+++...+.+ ..+++.|
T Consensus 26 ~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~--~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~--~~~~~~~ 101 (601)
T KOG0590|consen 26 RSIGKGSFSSSALASNSRDPESSSATKPISIPP--KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPR--SYLLSLS 101 (601)
T ss_pred ccccccccchhhhhhhcCCCcceeeccCCCCCC--CccchhhhcCccccccccccccccccccCCccCCCc--ccccccC
Confidence 448999999988776643 3456666664432 11222334555777777776 999999999998777 7899999
Q ss_pred cCCCCChhhhh-ccCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCCCCeEecCCCCCCeeecCCC-CeeeCCCchhhhccc
Q 009965 441 YASNGTLYEHL-HYGERCQVSWTRRMKIVIGIARGLKYLH-TELGPPFTISELNSSAVYLTEDF-SPKVSPLCLSFLLVS 517 (521)
Q Consensus 441 y~~~gsL~~~l-~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~ivH~Dlk~~NiLld~~~-~~kl~DfGla~~~~~ 517 (521)
|..+|++.+.+ +... ...+......+..|+..|+.|+| +. ++.|||+||+|.+++..+ ..+++|||+|..+..
T Consensus 102 ~s~g~~~f~~i~~~~~-~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 102 YSDGGSLFSKISHPDS-TGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLATAYRN 177 (601)
T ss_pred cccccccccccccCCc-cCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhccccc
Confidence 99999999988 4322 23556667788999999999999 76 999999999999999999 999999999987654
|
|
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.5e-08 Score=105.11 Aligned_cols=169 Identities=24% Similarity=0.270 Sum_probs=101.9
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
..+..|++.+|.|... ...+..+++|++|+|++|+|+...+ +..++.|+.|++++|.++. + ..+..++.|+.+++
T Consensus 95 ~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~l~~N~i~~-~-~~~~~l~~L~~l~l 169 (414)
T KOG0531|consen 95 KSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKELNLSGNLISD-I-SGLESLKSLKLLDL 169 (414)
T ss_pred cceeeeeccccchhhc-ccchhhhhcchheeccccccccccc--hhhccchhhheeccCcchh-c-cCCccchhhhcccC
Confidence 4567777777777663 2236667777777777777775432 5566667777777777762 2 34555777777777
Q ss_pred ccccCcccCchh-hhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcccCCC---C--CCEEeccCCcc
Q 009965 150 QSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLS---Q--LKVADFSYNFF 223 (521)
Q Consensus 150 s~N~l~g~~p~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~---~--L~~L~ls~N~l 223 (521)
++|.++. ++.. ...+.+|+.+++.+|.+. .+.... ....+..+++..|.++.+.++. . |+.+++++|.+
T Consensus 170 ~~n~i~~-ie~~~~~~~~~l~~l~l~~n~i~-~i~~~~---~~~~l~~~~l~~n~i~~~~~l~~~~~~~L~~l~l~~n~i 244 (414)
T KOG0531|consen 170 SYNRIVD-IENDELSELISLEELDLGGNSIR-EIEGLD---LLKKLVLLSLLDNKISKLEGLNELVMLHLRELYLSGNRI 244 (414)
T ss_pred Ccchhhh-hhhhhhhhccchHHHhccCCchh-cccchH---HHHHHHHhhcccccceeccCcccchhHHHHHHhcccCcc
Confidence 7777773 3322 466677777777777665 222110 0112233356666666554433 2 67888888887
Q ss_pred ccC--CccccccCCCcccCCCcCCCCC
Q 009965 224 VGS--IPKCLEYLPSTSFQGNCLQNKD 248 (521)
Q Consensus 224 ~g~--ip~~l~~l~~l~~~~N~l~~~~ 248 (521)
.-. ....+..++.+++..|.+....
T Consensus 245 ~~~~~~~~~~~~l~~l~~~~n~~~~~~ 271 (414)
T KOG0531|consen 245 SRSPEGLENLKNLPVLDLSSNRISNLE 271 (414)
T ss_pred ccccccccccccccccchhhccccccc
Confidence 732 2334566677777777666543
|
|
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.58 E-value=7.1e-07 Score=83.27 Aligned_cols=110 Identities=18% Similarity=0.176 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHhccCC--CCccceeeEEecCCC--CceEEEEecCCCC-ChhhhhccCCCCCCCHHHHHHHHHHHHHHHH
Q 009965 402 ELYFQREVADLARINH--ENTGKLLGYCRESSP--FTRMLVFDYASNG-TLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476 (521)
Q Consensus 402 ~~~~~~E~~~l~~l~H--~niv~l~g~~~~~~~--~~~~lv~ey~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~ 476 (521)
...+.+|...+..++. =.+.+.+++...... ...++|+|++++. +|.+++..... .+...+..++.++++.++
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~--~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ--LDPSQRRELLRALARLIA 132 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc--cchhhHHHHHHHHHHHHH
Confidence 3467888888888854 334566777654321 2458999999874 79998864222 566678899999999999
Q ss_pred HHhcCCCCCeEecCCCCCCeeecCCC---CeeeCCCchhhhcc
Q 009965 477 YLHTELGPPFTISELNSSAVYLTEDF---SPKVSPLCLSFLLV 516 (521)
Q Consensus 477 yLH~~~~~~ivH~Dlk~~NiLld~~~---~~kl~DfGla~~~~ 516 (521)
-||+. +|+|+|++++|||++.+. .+.++||+-++...
T Consensus 133 ~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~ 172 (206)
T PF06293_consen 133 KLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP 172 (206)
T ss_pred HHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence 99999 999999999999999877 89999999877543
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.52 E-value=5.2e-07 Score=94.44 Aligned_cols=148 Identities=16% Similarity=0.190 Sum_probs=94.6
Q ss_pred hhhh-chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccc------------------------------hh------hH
Q 009965 360 EDFS-NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWT------------------------------GY------LE 402 (521)
Q Consensus 360 ~~~~-~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~------------------------------~~------~~ 402 (521)
..|+ +.|+.++-|+||+|++++|+.||||+....-+..- .. .+
T Consensus 126 ~eF~~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~E 205 (517)
T COG0661 126 SEFEPEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREE 205 (517)
T ss_pred HHcCCCchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHH
Confidence 3344 67999999999999999999999999743311100 00 01
Q ss_pred HHHHHHHHHHhccC-----CCCccceeeEEec-CCCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHH-
Q 009965 403 LYFQREVADLARIN-----HENTGKLLGYCRE-SSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGL- 475 (521)
Q Consensus 403 ~~~~~E~~~l~~l~-----H~niv~l~g~~~~-~~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL- 475 (521)
-++.+|..-+.+++ .+++ .+=..|++ .. ...|+|||++|-.+.+...-+. ...+ +..|+..++++.
T Consensus 206 lDy~~EA~n~~~~~~nf~~~~~v-~VP~V~we~t~--~~VLtmE~i~Gi~i~d~~~l~~-~g~d---~k~ia~~~~~~f~ 278 (517)
T COG0661 206 LDYRREAANAERFRENFKDDPDV-YVPKVYWEYTT--RRVLTMEWIDGIKISDIAALKS-AGID---RKELAELLVRAFL 278 (517)
T ss_pred hCHHHHHHHHHHHHHHcCCCCCe-EeceeehhccC--CcEEEEEeeCCEecccHHHHHh-cCCC---HHHHHHHHHHHHH
Confidence 12444444444442 2333 22233332 22 5799999999988888743122 2344 344555444432
Q ss_pred HHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 476 KYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 476 ~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
.-+-.. +++|.|..|.||+++.++...+-|||+...+++
T Consensus 279 ~q~~~d---gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 279 RQLLRD---GFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred HHHHhc---CccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 222234 899999999999999999999999999877654
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.51 E-value=2.3e-08 Score=98.54 Aligned_cols=154 Identities=21% Similarity=0.235 Sum_probs=109.7
Q ss_pred CCEEEEEecCCCCCccCC--ccccCCCCCCEEECcCCcccccCCcc-ccCCCCCcEEEccCCcCCCC-CCcccCCCccCc
Q 009965 70 DRVLKINISGSSLKGFLA--PELGLLTYLQELILHGNNLIGIIPKE-LGLLKRLKILDLGTNQLTGP-IPPEIGNLTGLV 145 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p--~~l~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~g~-~p~~~~~l~~L~ 145 (521)
.+|+.|||+.|-+...-| .-...|++|+.|+|+.|++.-..... -..+++|+.|.|+.+.|+.. +-.....+++|+
T Consensus 146 ~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~ 225 (505)
T KOG3207|consen 146 PNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLE 225 (505)
T ss_pred CcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHH
Confidence 479999999999986433 34578999999999999997332222 23678999999999998721 112234678999
Q ss_pred eeecccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc-----------cCCCCCC
Q 009965 146 KINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----------CHLSQLK 214 (521)
Q Consensus 146 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~-----------~~l~~L~ 214 (521)
.|+|..|..-+..-.....+..|++|||++|++- ..+.....+..+.+..++++.+.++++ ..+++|+
T Consensus 226 ~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li-~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~ 304 (505)
T KOG3207|consen 226 VLYLEANEIILIKATSTKILQTLQELDLSNNNLI-DFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLE 304 (505)
T ss_pred HhhhhcccccceecchhhhhhHHhhccccCCccc-ccccccccccccchhhhhccccCcchhcCCCccchhhhcccccce
Confidence 9999999633344445566789999999999987 444322222234666677777766543 2367899
Q ss_pred EEeccCCccc
Q 009965 215 VADFSYNFFV 224 (521)
Q Consensus 215 ~L~ls~N~l~ 224 (521)
+|+++.|++.
T Consensus 305 ~L~i~~N~I~ 314 (505)
T KOG3207|consen 305 YLNISENNIR 314 (505)
T ss_pred eeecccCccc
Confidence 9999999986
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.50 E-value=6.7e-07 Score=90.48 Aligned_cols=142 Identities=15% Similarity=0.165 Sum_probs=108.6
Q ss_pred CCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCC--CCceEEEEecCCC-C
Q 009965 370 PDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS--PFTRMLVFDYASN-G 445 (521)
Q Consensus 370 ~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~--~~~~~lv~ey~~~-g 445 (521)
...+.||+... ||..+++|++...+.+... ....-+++++++.|+|+|++..++.... ....++||+|.|+ +
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~n----k~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~ 363 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTN----KDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSP 363 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcc----cchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCc
Confidence 44678999886 8999999998333222111 1234578899999999999988876211 1168999999986 5
Q ss_pred ChhhhhccC-------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchh
Q 009965 446 TLYEHLHYG-------------ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512 (521)
Q Consensus 446 sL~~~l~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla 512 (521)
+|.++--.. .....++.....++.|+..||.++|+. |+.-+-|.+++||++.+.+++|+.-|+.
T Consensus 364 TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~ 440 (655)
T KOG3741|consen 364 TLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIM 440 (655)
T ss_pred hHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccce
Confidence 787764311 123467888999999999999999999 9999999999999999999999998887
Q ss_pred hhcccc
Q 009965 513 FLLVSS 518 (521)
Q Consensus 513 ~~~~~~ 518 (521)
.++.+.
T Consensus 441 Dvl~~d 446 (655)
T KOG3741|consen 441 DVLQED 446 (655)
T ss_pred eeecCC
Confidence 776543
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.46 E-value=6.1e-07 Score=93.55 Aligned_cols=119 Identities=18% Similarity=0.137 Sum_probs=94.0
Q ss_pred CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCCCCChhhhhccCCCCCC
Q 009965 380 KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQV 459 (521)
Q Consensus 380 ~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~l 459 (521)
.++.+|.|........ .......+-++.|+.+|||||++++..++.+. ..|||+|-+. .|..++.+..
T Consensus 35 ~~~~~vsVF~~~~~~~----~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~--~~ylvTErV~--Pl~~~lk~l~---- 102 (690)
T KOG1243|consen 35 ADGGPVSVFVYKRSNG----EVTELAKRAVKRLKTLRHPNILSYLDTTEEEG--TLYLVTERVR--PLETVLKELG---- 102 (690)
T ss_pred ccCCceEEEEEeCCCc----hhhHHHHHHHHHhhhccCchhhhhhhhhcccC--ceEEEeeccc--cHHHHHHHhH----
Confidence 3677888877643322 11234566778899999999999999998877 7999999985 4777775322
Q ss_pred CHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhh
Q 009965 460 SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSF 513 (521)
Q Consensus 460 ~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~ 513 (521)
.....-.+.||+.||.|||+.| +++|++|.-..|++++.|+-||++|-++.
T Consensus 103 -~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~ 153 (690)
T KOG1243|consen 103 -KEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVS 153 (690)
T ss_pred -HHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEe
Confidence 3344456789999999999876 89999999999999999999999988764
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=98.46 E-value=2.2e-07 Score=84.17 Aligned_cols=61 Identities=18% Similarity=0.086 Sum_probs=53.7
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 445 GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 445 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
|+|.++++.+ ..+++|.++..|+.|+++||+|||+. + ||+|||+++++.+|+ ||+++....
T Consensus 1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~ 61 (176)
T smart00750 1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTP 61 (176)
T ss_pred CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecc
Confidence 7899999743 34699999999999999999999998 4 999999999999999 999887643
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C) | Back alignment and domain information |
|---|
Probab=98.43 E-value=8.3e-07 Score=81.21 Aligned_cols=104 Identities=25% Similarity=0.313 Sum_probs=82.1
Q ss_pred HHHHHHHhccCC-CCccceeeEEecCCCCceEEEEecCCCCChhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCC
Q 009965 406 QREVADLARINH-ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHY-GERCQVSWTRRMKIVIGIARGLKYLHTELG 483 (521)
Q Consensus 406 ~~E~~~l~~l~H-~niv~l~g~~~~~~~~~~~lv~ey~~~gsL~~~l~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~ 483 (521)
..|.-++..+++ +++.+++|+| ..++|.||.+.+++...-.. ..-..-+|.+|.+||.++.+.+.++++...
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~C------G~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~ 80 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSC------GRFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPL 80 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeEC------CCEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 357888888876 6999999999 34789999998766422100 011125899999999999999999999655
Q ss_pred CCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 484 PPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 484 ~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
..+.-.|++++|+-+++++++|+.|..-+...
T Consensus 81 ~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 81 GFFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred CcEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence 57777999999999999999999998765543
|
Proteins in this uncharacterised family are described as transmembrane proteins. |
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.37 E-value=2.1e-08 Score=104.30 Aligned_cols=122 Identities=28% Similarity=0.310 Sum_probs=92.3
Q ss_pred CCcEEEccCCcCCCCCCcccCCCccCceeecccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccc
Q 009965 119 RLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMY 198 (521)
Q Consensus 119 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~ 198 (521)
.|.+.+.+.|.+. ...+++.-++.|+.|||++|+++.. +.+..|+.|++|||+.|.|+ .+|.-...+ -.+..+.
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~g--c~L~~L~ 238 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVG--CKLQLLN 238 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhh--hhheeee
Confidence 4777888889887 6777888889999999999999843 27888999999999999998 676532221 2366678
Q ss_pred cccCCcCc---ccCCCCCCEEeccCCccccC---Cc-cccccCCCcccCCCcCCC
Q 009965 199 ASSANLTG---LCHLSQLKVADFSYNFFVGS---IP-KCLEYLPSTSFQGNCLQN 246 (521)
Q Consensus 199 l~~n~l~~---~~~l~~L~~L~ls~N~l~g~---ip-~~l~~l~~l~~~~N~l~~ 246 (521)
+.+|.++. +.+|.+|+.||+|+|-|.+- .| ..+..|..|.+.||++-+
T Consensus 239 lrnN~l~tL~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 239 LRNNALTTLRGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred ecccHHHhhhhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcccc
Confidence 88887765 55688999999999988653 23 335667788999996654
|
|
| >KOG1235 consensus Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.35 E-value=2.8e-06 Score=88.67 Aligned_cols=165 Identities=16% Similarity=0.170 Sum_probs=99.5
Q ss_pred cccccCHHHHHHHHhh------------hh-chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccc--------------
Q 009965 346 DVVRFSRQELEVACED------------FS-NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWT-------------- 398 (521)
Q Consensus 346 ~~~~~~~~~l~~~~~~------------~~-~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~-------------- 398 (521)
..++++++|+.+..+. |+ +.||.-+.|.||+|++++|..||||.-...-+...
T Consensus 136 ~~Pp~~~ee~~~i~e~ElG~~ie~if~~f~~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l 215 (538)
T KOG1235|consen 136 QAPPFPWEEAFKIFEEELGAPIEDIFSEFDEEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVL 215 (538)
T ss_pred cCCCCCHHHHHHHHHHHhCCCHHHHHHhcCcchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHH
Confidence 4566777766554322 33 67999999999999999999999998533211110
Q ss_pred -------------hhh------HHHHHHHHHHHhcc----CCCCc---cceeeEEecCCCCceEEEEecCCCCChhhhhc
Q 009965 399 -------------GYL------ELYFQREVADLARI----NHENT---GKLLGYCRESSPFTRMLVFDYASNGTLYEHLH 452 (521)
Q Consensus 399 -------------~~~------~~~~~~E~~~l~~l----~H~ni---v~l~g~~~~~~~~~~~lv~ey~~~gsL~~~l~ 452 (521)
.+. +-+|.+|.+-..++ +|-+. |.+=.++++-.. .+.|+||||+|..+.+.-.
T Consensus 216 ~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st-~RVLtME~~~G~~i~Dl~~ 294 (538)
T KOG1235|consen 216 QKFFPDFDLVWLVDEIAKSLPQELDFTKEAKNAERFRENFKDFSLLTYVLVPKVYWDLST-KRVLTMEYVDGIKINDLDA 294 (538)
T ss_pred HHhCcCCchhhHHHHHHhhhHhhcchHHHHHhHHHHHHHHHhcccccceeCCeehhhcCc-ceEEEEEecCCccCCCHHH
Confidence 000 11345555433333 45551 112222322211 5799999999987766532
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC----CCCeeeCCCchhhhccc
Q 009965 453 YGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE----DFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 453 ~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~----~~~~kl~DfGla~~~~~ 517 (521)
-. ...++... |+..+.++ |++.....|++|+|=.|.||+++. ++++.+-|||+.+.+..
T Consensus 295 i~-~~gi~~~~---i~~~l~~~--~~~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 295 ID-KRGISPHD---ILNKLVEA--YLEQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred HH-HcCCCHHH---HHHHHHHH--HHHHHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 11 11244443 33333332 333323338999999999999984 67899999999887653
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.33 E-value=4.1e-07 Score=86.89 Aligned_cols=96 Identities=21% Similarity=0.331 Sum_probs=78.2
Q ss_pred HHhccCCCCccceeeEEecCCC---CceEEEEecCCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 009965 411 DLARINHENTGKLLGYCRESSP---FTRMLVFDYASNGTLYEHLHYGE--RCQVSWTRRMKIVIGIARGLKYLHTELGPP 485 (521)
Q Consensus 411 ~l~~l~H~niv~l~g~~~~~~~---~~~~lv~ey~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ 485 (521)
-+-.+-|.|||++..|+.+... .....++|||+.|++.++|++.. ...+......+++-||..||.|||+ |.|+
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~Pp 198 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cCCc
Confidence 3555679999999999865431 24678999999999999997432 2345666668899999999999998 7999
Q ss_pred eEecCCCCCCeeecCCCCeeeC
Q 009965 486 FTISELNSSAVYLTEDFSPKVS 507 (521)
Q Consensus 486 ivH~Dlk~~NiLld~~~~~kl~ 507 (521)
|+|+++...-|++..++-+|+.
T Consensus 199 iihgnlTc~tifiq~ngLIkig 220 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIG 220 (458)
T ss_pred cccCCcchhheeecCCceEEec
Confidence 9999999999999988877765
|
|
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.6e-08 Score=84.40 Aligned_cols=109 Identities=23% Similarity=0.333 Sum_probs=83.9
Q ss_pred CEEEEEecCCCCCccCCcc---ccCCCCCCEEECcCCcccccCCcccc-CCCCCcEEEccCCcCCCCCCcccCCCccCce
Q 009965 71 RVLKINISGSSLKGFLAPE---LGLLTYLQELILHGNNLIGIIPKELG-LLKRLKILDLGTNQLTGPIPPEIGNLTGLVK 146 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~---l~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 146 (521)
.+-.++|+++.|-- +++. +.....|+..+|++|.|. .+|..|. ..+.++.|+|++|.++ .+|.++..++.|+.
T Consensus 28 E~h~ldLssc~lm~-i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~ 104 (177)
T KOG4579|consen 28 ELHFLDLSSCQLMY-IADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRS 104 (177)
T ss_pred HhhhcccccchhhH-HHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhh
Confidence 34557777776632 4443 445566777799999988 4565555 4458899999999998 78888999999999
Q ss_pred eecccccCcccCchhhhCCCCCCEEeCCCCCCCccCCC
Q 009965 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA 184 (521)
Q Consensus 147 L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 184 (521)
|+++.|.|. ..|..+..|.+|-.|+..+|.+. .+|.
T Consensus 105 lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~ 140 (177)
T KOG4579|consen 105 LNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDV 140 (177)
T ss_pred cccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcH
Confidence 999999998 78888888999999999888876 5554
|
|
| >TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172 | Back alignment and domain information |
|---|
Probab=98.32 E-value=7.6e-06 Score=77.40 Aligned_cols=134 Identities=7% Similarity=-0.067 Sum_probs=82.2
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCC--ccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN--TGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~g~~~~~~~~~~~lv~ey 441 (521)
..||+|..+.||+. .+..+++|...... ......+|.+++..+..-. +.+.++++...+ ...+||||
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~------~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~--~~glv~e~ 75 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF------DKETIKREFDASRKVFSLGIPTPHPFDLVEDGG--RLGLIYEL 75 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC------CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCC--eeeeeeee
Confidence 46899999999984 24456777653211 1234678999988885433 456677776655 56889999
Q ss_pred CCCCC-hhhhhccCCCCCCCHHHHHHHHHHHHHH---------------------------------------HHHHhcC
Q 009965 442 ASNGT-LYEHLHYGERCQVSWTRRMKIVIGIARG---------------------------------------LKYLHTE 481 (521)
Q Consensus 442 ~~~gs-L~~~l~~~~~~~l~~~~~~~i~~~ia~g---------------------------------------L~yLH~~ 481 (521)
+++.+ +.+.+. .+...+..++..+|+. ..+|...
T Consensus 76 i~G~~~~~~~~~------~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~ 149 (226)
T TIGR02172 76 IVGKRSFSRIIS------DNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEV 149 (226)
T ss_pred cCCccchhhhhc------CCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhC
Confidence 98853 221110 0011111111111111 2222211
Q ss_pred -CCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 482 -LGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 482 -~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
..+.++|+|+.|.||++++++ +.|.||+.+..-
T Consensus 150 ~~~~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~~G 183 (226)
T TIGR02172 150 PDTSTCLHGDFQIGNLITSGKG-TYWIDLGDFGYG 183 (226)
T ss_pred CCCCceEecCCCCCcEEEcCCC-cEEEechhcCcC
Confidence 134678999999999999888 999999987653
|
This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636. |
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.32 E-value=6.2e-09 Score=108.14 Aligned_cols=103 Identities=33% Similarity=0.371 Sum_probs=81.9
Q ss_pred CEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCc-ccCCCccCceeec
Q 009965 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPP-EIGNLTGLVKINL 149 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~L 149 (521)
.+...+.+.|.|.- +..++.-++.|+.|||++|+++.. +.+..|++|++|||++|++. .+|. ....+ .|+.|+|
T Consensus 165 ~L~~a~fsyN~L~~-mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc-~L~~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLVL-MDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGC-KLQLLNL 239 (1096)
T ss_pred hHhhhhcchhhHHh-HHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhh-hheeeee
Confidence 46667888888865 567788899999999999999854 37889999999999999998 5553 22333 3999999
Q ss_pred ccccCcccCchhhhCCCCCCEEeCCCCCCCc
Q 009965 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQG 180 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 180 (521)
++|.++. + ..+.+|.+|+.|||+.|-|.+
T Consensus 240 rnN~l~t-L-~gie~LksL~~LDlsyNll~~ 268 (1096)
T KOG1859|consen 240 RNNALTT-L-RGIENLKSLYGLDLSYNLLSE 268 (1096)
T ss_pred cccHHHh-h-hhHHhhhhhhccchhHhhhhc
Confidence 9999883 3 357889999999999998874
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.30 E-value=3.3e-07 Score=94.50 Aligned_cols=147 Identities=16% Similarity=0.133 Sum_probs=108.7
Q ss_pred Hhhhh--chhCcCCCeeEEEEEeC--CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCC
Q 009965 359 CEDFS--NIIGSSPDSLVYKGTMK--GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPF 433 (521)
Q Consensus 359 ~~~~~--~~ig~G~~g~Vy~~~~~--~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 433 (521)
+.+|. ..||.|.|+.||+...+ ++..+++|.+...... ...+..-..|+-+...+ .|.+++.....+....
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~--~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r-- 339 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLAT--FASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR-- 339 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccc--hHhhhcchhhhhHhhHhhcccccCCCCCCccccc--
Confidence 34455 67999999999998754 5778888876433221 11112224566555555 5778887655444444
Q ss_pred ceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCC-CCeeeCCCchh
Q 009965 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED-FSPKVSPLCLS 512 (521)
Q Consensus 434 ~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~-~~~kl~DfGla 512 (521)
..|+--||++++++...+ .....++...++++..+++.++.++|+. .++|+|+||+||++..+ +.-++.|||.+
T Consensus 340 ~~~ip~e~~~~~s~~l~~--~~~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~~ 414 (524)
T KOG0601|consen 340 QGYIPLEFCEGGSSSLRS--VTSQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGCW 414 (524)
T ss_pred cccCchhhhcCcchhhhh--HHHHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhccccccc
Confidence 567999999999887665 2334578888999999999999999988 99999999999999876 88899999988
Q ss_pred hh
Q 009965 513 FL 514 (521)
Q Consensus 513 ~~ 514 (521)
..
T Consensus 415 t~ 416 (524)
T KOG0601|consen 415 TR 416 (524)
T ss_pred cc
Confidence 63
|
|
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.24 E-value=8.8e-08 Score=80.07 Aligned_cols=113 Identities=21% Similarity=0.204 Sum_probs=89.7
Q ss_pred CCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceee
Q 009965 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
.-+++.++|++|.+....+.--..++.++.|+|++|.|+ .+|.++..++.|+.|++++|.|. ..|.-+..|.+|-.|+
T Consensus 52 ~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Ld 129 (177)
T KOG4579|consen 52 GYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLD 129 (177)
T ss_pred CceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhc
Confidence 347899999999999854444455678999999999999 68999999999999999999998 7888888899999999
Q ss_pred cccccCcccCchhhhCCCCCCEEeCCCCCCCccCCC
Q 009965 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA 184 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 184 (521)
..+|.+. .+|-.+-.-+.+-..++.++.+.+.-|.
T Consensus 130 s~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~ 164 (177)
T KOG4579|consen 130 SPENARA-EIDVDLFYSSLPALIKLGNEPLGDETKK 164 (177)
T ss_pred CCCCccc-cCcHHHhccccHHHHHhcCCcccccCcc
Confidence 9999988 6776643333333445666666655443
|
|
| >COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.24 E-value=1.3e-05 Score=74.83 Aligned_cols=140 Identities=12% Similarity=0.175 Sum_probs=93.8
Q ss_pred hhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccc--------------------hhhHHHHHHHHHHHhccC--CCCccc
Q 009965 365 IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWT--------------------GYLELYFQREVADLARIN--HENTGK 422 (521)
Q Consensus 365 ~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~--------------------~~~~~~~~~E~~~l~~l~--H~niv~ 422 (521)
.|++|.-+.||+|.-.++..+|||+......... ........+|..-|.++. +=.+.+
T Consensus 55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~ 134 (268)
T COG1718 55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPE 134 (268)
T ss_pred eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 5777888899999988899999999854321110 011233456777677663 444555
Q ss_pred eeeEEecCCCCceEEEEecCCCC-ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCC
Q 009965 423 LLGYCRESSPFTRMLVFDYASNG-TLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED 501 (521)
Q Consensus 423 l~g~~~~~~~~~~~lv~ey~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~ 501 (521)
.+++. .-.|||||+... .-.-.|.. .++...+...+..++.+.+.-|-..+ ++||+||..=|||+. +
T Consensus 135 Pi~~~------~nVLvMEfIg~~g~pAP~LkD---v~~e~~e~~~~~~~~v~~~~~l~~~a--~LVHgDLSEyNiL~~-~ 202 (268)
T COG1718 135 PIAFR------NNVLVMEFIGDDGLPAPRLKD---VPLELEEAEGLYEDVVEYMRRLYKEA--GLVHGDLSEYNILVH-D 202 (268)
T ss_pred ceeec------CCeEEEEeccCCCCCCCCccc---CCcCchhHHHHHHHHHHHHHHHHHhc--CcccccchhhheEEE-C
Confidence 55544 347999999753 11112211 12233356677788888888887632 999999999999999 8
Q ss_pred CCeeeCCCchhhhcc
Q 009965 502 FSPKVSPLCLSFLLV 516 (521)
Q Consensus 502 ~~~kl~DfGla~~~~ 516 (521)
+.+.|+|||-|-..+
T Consensus 203 ~~p~iID~~QaV~~~ 217 (268)
T COG1718 203 GEPYIIDVSQAVTID 217 (268)
T ss_pred CeEEEEECccccccC
Confidence 899999999775443
|
|
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.20 E-value=3.3e-07 Score=95.04 Aligned_cols=84 Identities=35% Similarity=0.381 Sum_probs=45.2
Q ss_pred CCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecccccCcccCchhhhCCCCCCEE
Q 009965 92 LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEEL 171 (521)
Q Consensus 92 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 171 (521)
.+..++.+++..|.+.. +-..+..+++|..|++.+|+|. .+...+..+++|++|+|++|.|+... .+..++.|+.|
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L 145 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKEL 145 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchh-hcccchhhhhcchheecccccccccc--chhhccchhhh
Confidence 44555555566665553 2233555566666666666665 23222555666666666666665322 24445556666
Q ss_pred eCCCCCCC
Q 009965 172 HLDRNRLQ 179 (521)
Q Consensus 172 ~Ls~N~l~ 179 (521)
++++|.++
T Consensus 146 ~l~~N~i~ 153 (414)
T KOG0531|consen 146 NLSGNLIS 153 (414)
T ss_pred eeccCcch
Confidence 66666655
|
|
| >PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.1e-06 Score=59.50 Aligned_cols=35 Identities=46% Similarity=0.768 Sum_probs=13.1
Q ss_pred CcEEEccCCcCCCCCCcccCCCccCceeecccccCc
Q 009965 120 LKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLT 155 (521)
Q Consensus 120 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 155 (521)
|++|++++|+|+ .+|..+++|++|+.|++++|+++
T Consensus 3 L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 3 LEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp -SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred ceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 344444444443 23333344444444444444333
|
... |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.19 E-value=1.4e-06 Score=94.98 Aligned_cols=104 Identities=18% Similarity=0.151 Sum_probs=69.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.|..|+||.||..+++ ..+.+|+| +..+.. +.+ ||.++. + ..+.|
T Consensus 89 klisngAygavylvrh~~trqrfa~k-iNkq~l---------ilR-----------nilt~a----~----npfvv---- 135 (1205)
T KOG0606|consen 89 KLISNGAYGAVYLVRHKETRQRFAMK-INKQNL---------ILR-----------NILTFA----G----NPFVV---- 135 (1205)
T ss_pred EeeccCCCCceeeeeccccccchhhc-ccccch---------hhh-----------cccccc----C----Cccee----
Confidence 67899999999999987 45667773 321110 111 222221 1 12333
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
|+=...++.-+..+.+ .+.+++|+|+. +|+|||+||.|.+|..-|.+|+.|||+.+..
T Consensus 136 --gDc~tllk~~g~lPvd----------mvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~G 193 (1205)
T KOG0606|consen 136 --GDCATLLKNIGPLPVD----------MVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKG 193 (1205)
T ss_pred --chhhhhcccCCCCcch----------hhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhh
Confidence 3444444322222221 27889999999 9999999999999999999999999999864
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.14 E-value=1.4e-06 Score=89.96 Aligned_cols=148 Identities=18% Similarity=0.104 Sum_probs=111.6
Q ss_pred hhchhCc--CCCeeEEEEEe--C-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCce
Q 009965 362 FSNIIGS--SPDSLVYKGTM--K-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 362 ~~~~ig~--G~~g~Vy~~~~--~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 435 (521)
....+|. |.+|.||.++. . ++..+|+|+-..... .......=.+|+....++ .|+|.++....+...+ ..
T Consensus 118 ~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s--~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~--~l 193 (524)
T KOG0601|consen 118 ISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFS--PPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSG--IL 193 (524)
T ss_pred cccccccCCCCCceeecccCCcccCCcccccccccCCCC--CccccccccchhhcccccCccccccccCcccccCC--cc
Confidence 3467888 99999999988 4 677888887432221 112222335677777777 6999999887777776 78
Q ss_pred EEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHH----HHHHHhcCCCCCeEecCCCCCCeeecCC-CCeeeCCCc
Q 009965 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIAR----GLKYLHTELGPPFTISELNSSAVYLTED-FSPKVSPLC 510 (521)
Q Consensus 436 ~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~----gL~yLH~~~~~~ivH~Dlk~~NiLld~~-~~~kl~DfG 510 (521)
++-+|++. .+|.++.+... ..++......+..+..+ |+.++|.. .++|-|+||.||++.++ ...++.|||
T Consensus 194 fiqtE~~~-~sl~~~~~~~~-~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~df~ 268 (524)
T KOG0601|consen 194 FIQTELCG-ESLQSYCHTPC-NFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTDFG 268 (524)
T ss_pred eeeecccc-chhHHhhhccc-ccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCCcc
Confidence 99999997 48888886332 22455556666667767 99999998 99999999999999988 889999999
Q ss_pred hhhhcccc
Q 009965 511 LSFLLVSS 518 (521)
Q Consensus 511 la~~~~~~ 518 (521)
+...+.+.
T Consensus 269 ~v~~i~~~ 276 (524)
T KOG0601|consen 269 LVSKISDG 276 (524)
T ss_pred eeEEccCC
Confidence 98876653
|
|
| >PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B | Back alignment and domain information |
|---|
Probab=98.11 E-value=1.8e-06 Score=58.50 Aligned_cols=37 Identities=41% Similarity=0.641 Sum_probs=32.9
Q ss_pred ccCceeecccccCcccCchhhhCCCCCCEEeCCCCCCC
Q 009965 142 TGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179 (521)
Q Consensus 142 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 179 (521)
++|++|+|++|+|+ .+|+.+++|++|++|++++|+++
T Consensus 1 ~~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 1 KNLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp TT-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred CcceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 47999999999999 68888999999999999999998
|
... |
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.10 E-value=1.5e-06 Score=96.98 Aligned_cols=104 Identities=30% Similarity=0.448 Sum_probs=50.2
Q ss_pred CEEEEEecCCC--CCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceee
Q 009965 71 RVLKINISGSS--LKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 71 ~l~~L~L~~n~--l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
.++.|-+.+|. +.-..+..|..++.|+.|||++|.=-+.+|.+++.|-+|++|+|+...++ .+|..+++|..|.+||
T Consensus 546 ~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Ln 624 (889)
T KOG4658|consen 546 KLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLN 624 (889)
T ss_pred ccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheec
Confidence 34444444443 22222222444555555555554444445555555555555555555554 4555555555555555
Q ss_pred cccccCcccCchhhhCCCCCCEEeCCC
Q 009965 149 LQSNGLTGRLPAELGNLISLEELHLDR 175 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 175 (521)
+..+.-...+|..+..|++|++|.+..
T Consensus 625 l~~~~~l~~~~~i~~~L~~Lr~L~l~~ 651 (889)
T KOG4658|consen 625 LEVTGRLESIPGILLELQSLRVLRLPR 651 (889)
T ss_pred cccccccccccchhhhcccccEEEeec
Confidence 555444334444444455555555433
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 521 | ||||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 3e-19 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 9e-19 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 1e-10 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 1e-10 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 2e-09 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 3e-09 | ||
| 3kmw_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 6e-09 | ||
| 3kmu_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 2e-08 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 5e-08 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 6e-08 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 6e-08 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 2e-07 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 7e-07 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 8e-07 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 1e-06 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 8e-07 | ||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 8e-07 | ||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 1e-06 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 8e-07 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 4e-05 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 8e-05 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 8e-05 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 9e-05 | ||
| 3g2f_A | 336 | Crystal Structure Of The Kinase Domain Of Bone Morp | 2e-04 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 3e-04 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 4e-04 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 9e-04 |
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271 | Back alignment and structure |
|
| >pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Apo) Length = 271 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 521 | |||
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 5e-52 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 4e-36 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 2e-34 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 9e-15 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 2e-38 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 2e-36 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 5e-35 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 6e-34 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 1e-33 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 5e-33 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 1e-32 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 4e-31 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 6e-29 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 1e-28 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 1e-34 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 2e-31 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 6e-30 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 1e-26 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 4e-25 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 4e-25 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 1e-10 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 1e-26 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 1e-22 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 1e-22 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 3e-22 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 2e-19 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 6e-17 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 4e-15 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 5e-26 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 2e-25 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 2e-23 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 1e-22 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 5e-21 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 1e-19 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 6e-17 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 2e-16 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 1e-25 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 2e-25 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 3e-25 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 5e-23 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 2e-22 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 6e-21 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 1e-19 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 4e-19 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 3e-18 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 5e-18 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 2e-17 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 3e-11 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 2e-09 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 1e-21 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 1e-20 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 5e-20 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 1e-12 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 4e-12 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 2e-20 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 5e-20 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 8e-17 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 4e-16 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 6e-16 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 3e-14 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 5e-13 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 3e-10 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 6e-10 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 1e-06 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 7e-05 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 7e-20 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 8e-20 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 9e-20 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 9e-17 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 2e-16 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 5e-12 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 3e-11 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 3e-19 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 5e-19 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 9e-19 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 1e-18 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 2e-18 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 1e-16 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 2e-15 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 2e-15 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 8e-15 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 6e-13 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 1e-07 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 1e-18 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 2e-17 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 4e-17 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 9e-16 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 2e-14 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 4e-11 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 8e-10 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 2e-18 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 1e-16 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 1e-15 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 5e-12 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 5e-07 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 3e-18 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 3e-18 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 4e-18 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 2e-16 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 8e-16 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 8e-13 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 8e-08 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 4e-05 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 6e-04 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 4e-18 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 1e-17 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 2e-16 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 2e-16 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 9e-15 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 1e-13 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 5e-10 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 2e-06 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 2e-17 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 3e-17 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 2e-16 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 3e-16 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 3e-16 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 5e-16 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 3e-15 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 2e-14 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 5e-13 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 3e-12 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 1e-08 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 2e-06 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 2e-05 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 6e-16 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 7e-16 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 2e-15 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 2e-14 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 4e-13 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 3e-10 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 8e-10 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 6e-07 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 1e-14 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 3e-14 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 7e-13 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 8e-13 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 1e-10 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 5e-05 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 1e-14 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 4e-14 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 8e-14 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 1e-12 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 7e-11 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 3e-05 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 1e-14 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 3e-13 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 2e-12 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 2e-14 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 1e-10 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 9e-08 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 3e-05 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 3e-14 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 7e-13 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 1e-10 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 2e-10 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 6e-07 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 4e-06 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 2e-05 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 5e-14 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 2e-12 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 2e-11 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 8e-11 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 1e-10 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 8e-10 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 8e-14 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 4e-11 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 6e-11 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 1e-05 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 3e-13 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 6e-11 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 3e-09 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 4e-13 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 1e-12 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 2e-11 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 2e-11 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 6e-06 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 5e-13 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 6e-11 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 9e-10 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 6e-13 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 2e-10 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 4e-09 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 2e-07 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 6e-05 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 9e-13 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 1e-12 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 1e-11 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 1e-11 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 2e-10 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 4e-09 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 1e-12 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 1e-12 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 1e-10 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 1e-10 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 4e-08 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 8e-08 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 8e-08 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 1e-12 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 3e-11 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 6e-10 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 4e-04 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 2e-12 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 9e-12 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 8e-10 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 9e-04 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 2e-12 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 4e-11 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 3e-10 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 3e-10 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 2e-09 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 2e-12 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 1e-10 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 2e-08 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 5e-07 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 2e-06 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 9e-04 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 3e-12 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 5e-12 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 1e-11 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 1e-10 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 1e-10 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 3e-07 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 5e-12 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 4e-11 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 1e-10 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 2e-10 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 3e-04 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 6e-12 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 4e-08 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 3e-06 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 7e-12 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 1e-10 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 3e-10 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 1e-06 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 1e-11 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 2e-11 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 5e-11 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 2e-10 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 9e-09 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 1e-08 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 9e-08 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 1e-11 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 6e-10 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 2e-09 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 2e-08 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 4e-04 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 2e-11 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 1e-07 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 5e-11 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 8e-10 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 9e-09 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 8e-11 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 1e-08 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 2e-10 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 2e-09 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 2e-08 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 3e-10 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 8e-06 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 4e-10 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 9e-08 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 2e-07 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 5e-10 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 2e-09 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 3e-07 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 5e-07 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 5e-10 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 1e-09 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 7e-09 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 4e-07 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 9e-10 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 2e-09 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 6e-09 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 2e-08 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 2e-07 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 7e-09 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 1e-08 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 1e-08 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 1e-08 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 2e-08 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 2e-07 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 8e-07 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 1e-05 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 5e-04 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 2e-08 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 2e-08 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 2e-08 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 2e-08 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 4e-08 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 2e-07 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 7e-05 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 3e-08 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 3e-08 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 3e-08 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 3e-08 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 3e-08 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 3e-08 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 6e-08 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 3e-07 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 2e-05 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 4e-08 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 4e-08 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 4e-08 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 5e-08 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 5e-08 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 6e-08 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 6e-08 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 2e-04 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 6e-08 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 6e-08 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 6e-08 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 7e-08 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 2e-07 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 1e-06 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 8e-08 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 8e-08 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 9e-08 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 1e-07 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 1e-07 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 1e-07 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 1e-07 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 2e-07 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 1e-07 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 1e-07 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 1e-07 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 1e-07 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 8e-07 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 2e-07 | |
| 3v5q_A | 297 | NT-3 growth factor receptor; kinase domain, kinase | 3e-07 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 3e-07 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 3e-07 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 5e-07 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 5e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-04 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 6e-07 | |
| 3zzw_A | 289 | Tyrosine-protein kinase transmembrane receptor RO; | 7e-07 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 8e-07 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 8e-07 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 1e-06 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 2e-06 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 2e-06 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 2e-06 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 2e-06 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 2e-06 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 5e-06 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 6e-06 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 1e-05 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 2e-05 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 3e-05 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 7e-05 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 1e-04 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 2e-04 |
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 178 bits (454), Expect = 5e-52
Identities = 65/231 (28%), Positives = 95/231 (41%), Gaps = 22/231 (9%)
Query: 31 ALTTFKEAIYEDPHLVLSNWN-ALDADPCHWTGIACSDAR--DRVLKINISGSSLKG--F 85
AL K+ + L S+W D W G+ C RV +++SG +L
Sbjct: 10 ALLQIKKDLGNPTTL--SSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYP 67
Query: 86 LAPELGLLTYLQELILHG-NNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGL 144
+ L L YL L + G NNL+G IP + L +L L + ++G IP + + L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 145 VKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA--GSNSGYTANIHGMYASSA 202
V ++ N L+G LP + +L +L + D NR+ GA+P GS S M S
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSK---LFTSMTISRN 184
Query: 203 NLTG-----LCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSF---QGNCLQ 245
LTG +L+ L D S N G +T N L
Sbjct: 185 RLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLA 234
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 135 bits (343), Expect = 4e-36
Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 24/163 (14%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL-KILDLGTNQLTGP 133
++ S ++L G L P + L L + GN + G IP G +L + + N+LTG
Sbjct: 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGK 189
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
IPP NL L ++L N L G G+ + +++HL +N L +
Sbjct: 190 IPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG---------- 238
Query: 194 IHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
L L D N G++P+ L L
Sbjct: 239 ------KVGLSKNLNGL------DLRNNRIYGTLPQGLTQLKF 269
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 130 bits (330), Expect = 2e-34
Identities = 48/192 (25%), Positives = 69/192 (35%), Gaps = 37/192 (19%)
Query: 75 INISGSSLKGFLAPELGLLTYL-QELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
I G+ + G + G + L + + N L G IP L L +DL N L G
Sbjct: 154 ITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGD 212
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
G+ KI+L N L L ++G +L L L NR+ G +P G
Sbjct: 213 ASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQG-------- 263
Query: 194 IHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPK--CLEYLPSTSFQGNCLQNKDPKQ 251
L L L + S+N G IP+ L+ +++ N
Sbjct: 264 -------------LTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANN--------- 301
Query: 252 RATTLCGGAPPA 263
LCG PA
Sbjct: 302 --KCLCGSPLPA 311
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 74.1 bits (183), Expect = 9e-15
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
KI+++ +SL L ++GL L L L N + G +P+ L LK L L++ N L G
Sbjct: 225 KIHLAKNSLAFDL-GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGE 283
Query: 134 IPPEIGNLTGLVKINLQSN-GLTG 156
I P+ GNL +N L G
Sbjct: 284 I-PQGGNLQRFDVSAYANNKCLCG 306
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 148 bits (377), Expect = 2e-38
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 8/170 (4%)
Query: 75 INISGSSLKGFLAPEL-GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++++ + G + L G L L L GN+ G +P G L+ L L +N +G
Sbjct: 274 LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGE 333
Query: 134 IPPE-IGNLTGLVKINLQSNGLTGRLPAELGNL-ISLEELHLDRNRLQGAVPAGSNSGYT 191
+P + + + GL ++L N +G LP L NL SL L L N G +
Sbjct: 334 LPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPK 393
Query: 192 ANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ +Y + TG L + S+L S+N+ G+IP L L
Sbjct: 394 NTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSK 443
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 143 bits (362), Expect = 2e-36
Identities = 53/182 (29%), Positives = 77/182 (42%), Gaps = 8/182 (4%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+ + + G + P L + L L L N L G IP LG L +L+ L L N L G I
Sbjct: 399 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEI 458
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANI 194
P E+ + L + L N LTG +P+ L N +L + L NRL G +P G N+
Sbjct: 459 PQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP--KWIGRLENL 516
Query: 195 HGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNKDP 249
+ S+ + +G L L D + N F G+IP + N + K
Sbjct: 517 AILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSG-KIAANFIAGKRY 575
Query: 250 KQ 251
Sbjct: 576 VY 577
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 138 bits (351), Expect = 5e-35
Identities = 56/171 (32%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 75 INISGSSLKGFLAPELG--LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG 132
+++S ++ G + P L LQEL L N G IP L L L L N L+G
Sbjct: 373 LDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSG 432
Query: 133 PIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA--GSNSGY 190
IP +G+L+ L + L N L G +P EL + +LE L LD N L G +P+ + +
Sbjct: 433 TIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCT-- 490
Query: 191 TANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
N++ + S+ LTG + L L + S N F G+IP L S
Sbjct: 491 --NLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRS 539
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 6e-34
Identities = 33/171 (19%), Positives = 66/171 (38%), Gaps = 16/171 (9%)
Query: 75 INISGSSLKGFLAPEL---GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131
+++S +S+ G L+ L + GN + G + + L+ LD+ +N +
Sbjct: 156 LDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFS 213
Query: 132 GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYT 191
I P +G+ + L +++ N L+G + L+ L++ N+ G +P
Sbjct: 214 TGI-PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLK--- 269
Query: 192 ANIHGMYASSANLTG------LCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
++ + + TG L D S N F G++P
Sbjct: 270 -SLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSL 319
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 1e-33
Identities = 43/180 (23%), Positives = 67/180 (37%), Gaps = 23/180 (12%)
Query: 65 CSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILD 124
+D + + +G + +L L+ + G + LD
Sbjct: 579 KNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLD 638
Query: 125 LGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA 184
+ N L+G IP EIG++ L +NL N ++G +P E+G+L L L L N+L G +P
Sbjct: 639 MSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIP- 697
Query: 185 GSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKC--LEYLPSTSFQGN 242
+ L+ L D S N G IP+ E P F N
Sbjct: 698 --------------------QAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNN 737
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 5e-33
Identities = 55/169 (32%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+++S ++ + P LG + LQ L + GN L G + + LK+L++ +NQ GPI
Sbjct: 205 LDVSSNNFSTGI-PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPI 263
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
PP L L ++L N TG +P L G +L L L N GAVP G +
Sbjct: 264 PPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP--PFFGSCSL 319
Query: 194 IHGMYASSANLTG------LCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ + SS N +G L + LKV D S+N F G +P+ L L +
Sbjct: 320 LESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSA 368
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 1e-32
Identities = 51/188 (27%), Positives = 73/188 (38%), Gaps = 27/188 (14%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+ + + L+G + EL + L+ LIL N+L G IP L L + L N+LTG I
Sbjct: 447 LKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEI 506
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG--------- 185
P IG L L + L +N +G +PAELG+ SL L L+ N G +PA
Sbjct: 507 PKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIA 566
Query: 186 ------------SNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIP 228
N G H + G L LS + + + G
Sbjct: 567 ANFIAGKRYVYIKNDGMKKECH-GAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTS 625
Query: 229 KCLEYLPS 236
+ S
Sbjct: 626 PTFDNNGS 633
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 126 bits (320), Expect = 4e-31
Identities = 43/232 (18%), Positives = 82/232 (35%), Gaps = 42/232 (18%)
Query: 17 LFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKIN 76
A+ + E L +FK+ + +L +W++ + +PC + G+ C D+V I+
Sbjct: 2 FQASPSQSLYREIHQLISFKDVL--PDKNLLPDWSS-NKNPCTFDGVTCR--DDKVTSID 56
Query: 77 ISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPP 136
+S L + L L L+ L L + + G +
Sbjct: 57 LSSKPLNVGF---------------------SAVSSSLLSLTGLESLFLSNSHINGSV-S 94
Query: 137 EIGNLTGLVKINLQSNGLTGRLPA--ELGNLISLEELHLDRNRLQGAVPAGSNSGYTANI 194
L ++L N L+G + LG+ L+ L++ N L ++
Sbjct: 95 GFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLN-SL 153
Query: 195 HGMYASSANLTG--------LCHLSQLKVADFSYNFFVGSIP----KCLEYL 234
+ S+ +++G +LK S N G + LE+L
Sbjct: 154 EVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFL 205
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 6e-29
Identities = 44/167 (26%), Positives = 67/167 (40%), Gaps = 9/167 (5%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
I++S + L G + +G L L L L N+ G IP ELG + L LDL TN G I
Sbjct: 495 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTI 554
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANI 194
P + +G + +N + G+ + N +E H N L+ +
Sbjct: 555 PAAMFKQSGK----IAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTR 610
Query: 195 HGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ +S G + + D SYN G IPK + +P
Sbjct: 611 NPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPY 657
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 1e-28
Identities = 52/168 (30%), Positives = 67/168 (39%), Gaps = 24/168 (14%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKEL-GLLKRLKILDLGTNQLTGP 133
+NIS + G + P L LQ L L N G IP L G L LDL N G
Sbjct: 252 LNISSNQFVGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGA 309
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTA 192
+PP G+ + L + L SN +G LP + L + L+ L L N G +P
Sbjct: 310 VPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPE-------- 361
Query: 193 NIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
S NL+ + L D S N F G I L P + Q
Sbjct: 362 -------SLTNLS-----ASLLTLDLSSNNFSGPILPNLCQNPKNTLQ 397
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 1e-34
Identities = 61/173 (35%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 340 DSEI-LKDVVRFSRQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEH 396
D E+ L + RFS +EL+VA ++FS NI+G VYKG + G +AV L KEE
Sbjct: 9 DPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRL--KEER 66
Query: 397 WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH--YG 454
G EL FQ EV ++ H N +L G+C + R+LV+ Y +NG++ L
Sbjct: 67 TQGG-ELQFQTEVEMISMAVHRNLLRLRGFCMTPT--ERLLVYPYMANGSVASCLRERPE 123
Query: 455 ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVS 507
+ + W +R +I +G ARGL YLH P ++ ++ + L E+F V
Sbjct: 124 SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 2e-31
Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 13/184 (7%)
Query: 328 KKSASEKDHIYIDSEILKDVVRFSRQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEI 385
K + S D + + + R +LE A +F +IG VYKG ++ G ++
Sbjct: 7 KATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKV 66
Query: 386 AVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNG 445
A+ E G E F+ E+ L+ H + L+G+C E + +L++ Y NG
Sbjct: 67 ALKRR--TPESSQGIEE--FETEIETLSFCRHPHLVSLIGFCDERN--EMILIYKYMENG 120
Query: 446 TLYEHLHYGERCQV--SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503
L HL+ + + SW +R++I IG ARGL YLHT ++ S + L E+F
Sbjct: 121 NLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFV 177
Query: 504 PKVS 507
PK++
Sbjct: 178 PKIT 181
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 6e-30
Identities = 47/168 (27%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 349 RFSRQELEVACEDFSNIIGSSPDSL--------VYKGTMKGGPEIAVISLCIKEEHWTGY 400
FS EL+ +F S + VYKG + +AV L + T
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTEE 72
Query: 401 LELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQV- 459
L+ F +E+ +A+ HEN +LLG+ + LV+ Y NG+L + L +
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGD--DLCLVYVYMPNGSLLDRLSCLDGTPPL 130
Query: 460 SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVS 507
SW R KI G A G+ +LH ++ S+ + L E F+ K+S
Sbjct: 131 SWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKIS 175
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 1e-26
Identities = 31/171 (18%), Positives = 51/171 (29%), Gaps = 20/171 (11%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+++S + L+ + LQ L L + I L L L L N +
Sbjct: 32 NLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSL 91
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
L+ L K+ L +G+L +L+EL++ N +Q
Sbjct: 92 ALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEY------- 144
Query: 194 IHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCL 244
+L+ L+ D S N L L L
Sbjct: 145 -------------FSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSL 182
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 1e-22
Identities = 34/180 (18%), Positives = 58/180 (32%), Gaps = 32/180 (17%)
Query: 75 INISGSSLKGFLAPE-LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++ S+LK L L L + + L L++L + N
Sbjct: 401 LDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 460
Query: 134 IPPEI-GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTA 192
P+I L L ++L L P +L SL+ L++ N +
Sbjct: 461 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS-LDTFP------ 513
Query: 193 NIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPST---------SFQGNC 243
L+ L+V D+S N + S + L++ PS+ F C
Sbjct: 514 --------------YKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 559
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 1e-22
Identities = 32/181 (17%), Positives = 60/181 (33%), Gaps = 9/181 (4%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIG-IIPKELGLLKRLKILDLGTNQLTGP 133
++IS + + L+ L+ L + GN+ +P L+ L LDL QL
Sbjct: 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQL 485
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
P +L+ L +N+ N L SL+ L N + + ++
Sbjct: 486 SPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMT-SKKQELQHFPSS 544
Query: 194 IHGMYASSANLTGLCH-------LSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQN 246
+ + + + C + + + P + +P S C N
Sbjct: 545 LAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQGMPVLSLNITCQMN 604
Query: 247 K 247
K
Sbjct: 605 K 605
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 99.3 bits (248), Expect = 3e-22
Identities = 38/162 (23%), Positives = 60/162 (37%), Gaps = 8/162 (4%)
Query: 81 SLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-G 139
S KG + T L+ L L N +I + LGL ++L+ LD + L +
Sbjct: 360 SFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGL-EQLEHLDFQHSNLKQMSEFSVFL 418
Query: 140 NLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYA 199
+L L+ +++ L SLE L + N Q + N+ +
Sbjct: 419 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELR-NLTFLDL 477
Query: 200 SSANLTGL-----CHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
S L L LS L+V + S+N F + L S
Sbjct: 478 SQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNS 519
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 90.5 bits (225), Expect = 2e-19
Identities = 36/204 (17%), Positives = 72/204 (35%), Gaps = 22/204 (10%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGI-IPKELGLLKRLKILDLGTNQLTG 132
K+ ++L +G L L+EL + N + +P+ L L+ LDL +N++
Sbjct: 104 KLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
Query: 133 PIPPEIGNLTGL----VKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG--- 185
++ L + + ++L N + + I L +L L N V
Sbjct: 164 IYCTDLRVLHQMPLLNLSLDLSLNPMNF-IQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQ 222
Query: 186 --SNSGYTANIHGMYASSANLT--------GLCHLSQLKVADFSYNFFVGSIP---KCLE 232
+ + G + + NL GLC+L+ + ++++ I CL
Sbjct: 223 GLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLT 282
Query: 233 YLPSTSFQGNCLQNKDPKQRATTL 256
+ S S ++
Sbjct: 283 NVSSFSLVSVTIERVKDFSYNFGW 306
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 82.8 bits (205), Expect = 6e-17
Identities = 30/183 (16%), Positives = 48/183 (26%), Gaps = 44/183 (24%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKR--------------- 119
++ +++ + Q L L +L LKR
Sbjct: 287 FSLVSVTIERV--KDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEV 344
Query: 120 ----LKILDLGTNQLT--GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHL 173
L+ LDL N L+ G T L ++L NG+ + + L LE L
Sbjct: 345 DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDF 403
Query: 174 DRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEY 233
+ L+ L L D S+ +
Sbjct: 404 QHSNLKQMSEFSV--------------------FLSLRNLIYLDISHTHTRVAFNGIFNG 443
Query: 234 LPS 236
L S
Sbjct: 444 LSS 446
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 4e-15
Identities = 22/136 (16%), Positives = 34/136 (25%), Gaps = 24/136 (17%)
Query: 101 LHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPA 160
N I L K LDL N L + L ++L +
Sbjct: 14 CMELNFYKIPD---NLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDG 70
Query: 161 ELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSY 220
+L L L L N +Q + G+ LS L+
Sbjct: 71 AYQSLSHLSTLILTGNPIQS-LALGA--------------------FSGLSSLQKLVAVE 109
Query: 221 NFFVGSIPKCLEYLPS 236
+ +L +
Sbjct: 110 TNLASLENFPIGHLKT 125
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 5e-26
Identities = 21/186 (11%), Positives = 54/186 (29%), Gaps = 34/186 (18%)
Query: 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQL 130
++K I+ + + + ++ NN+ + K + L +L+ +G +
Sbjct: 160 DLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITFV-SKAVMRLTKLRQFYMGNSPF 218
Query: 131 TGP-------------------IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEEL 171
+ NL L + + + +LP L L ++ +
Sbjct: 219 VAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLI 278
Query: 172 HLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYN-FFVGSIPKC 230
++ NR + L ++++ YN +
Sbjct: 279 NVACNRGISGEQLKDDWQ-------------ALADAPVGEKIQIIYIGYNNLKTFPVETS 325
Query: 231 LEYLPS 236
L+ +
Sbjct: 326 LQKMKK 331
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 2e-25
Identities = 30/163 (18%), Positives = 57/163 (34%), Gaps = 17/163 (10%)
Query: 88 PELGLLTYLQELILHGNNLIGI-IPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVK 146
+ + +Q + + NNL + L +K+L +L+ NQL G P G+ L
Sbjct: 299 ADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEG-KLPAFGSEIKLAS 357
Query: 147 INLQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT 205
+NL N +T +PA G +E L N+L+ +P ++ + + + S +
Sbjct: 358 LNLAYNQITE-IPANFCGFTEQVENLSFAHNKLKY-IPNIFDAKSVSVMSAIDFSYNEIG 415
Query: 206 G------------LCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ + S N +
Sbjct: 416 SVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSP 458
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 2e-23
Identities = 26/172 (15%), Positives = 52/172 (30%), Gaps = 25/172 (14%)
Query: 89 ELGLLTYLQELILHGNNLIGI-------IPKELGLLKRLKILDLGTNQLTGPIPPEIGNL 141
+ ++ + + N + + + + ++L NQ++
Sbjct: 397 DAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTG 456
Query: 142 TGLVKINLQSNGLTG-------RLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANI 194
+ L INL N LT N L + L N+L + + +
Sbjct: 457 SPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTK-LSDDFRATTLPYL 515
Query: 195 HGMYASSANLTGL----CHLSQLKV------ADFSYNFFVGSIPKCLEYLPS 236
G+ S + + + S LK D N + P+ + PS
Sbjct: 516 VGIDLSYNSFSKFPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPS 567
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 1e-22
Identities = 33/183 (18%), Positives = 55/183 (30%), Gaps = 22/183 (12%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGI-IPKELGLLKRLKILDLGTNQLTG 132
+N++ + + A G ++ L N L I + + + +D N++
Sbjct: 357 SLNLAYNQITEIPANFCGFTEQVENLSFAHNKLKYIPNIFDAKSVSVMSAIDFSYNEIGS 416
Query: 133 -------PIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG 185
P+ P + INL +N ++ L ++L N L +P
Sbjct: 417 VDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTE-IPKN 475
Query: 186 SNSGYTANIHGM------YASSANLTGL------CHLSQLKVADFSYNFFVGSIPKCLEY 233
S N LT L L L D SYN F P
Sbjct: 476 SLKDENENFKNTYLLTSIDLRFNKLTKLSDDFRATTLPYLVGIDLSYNSF-SKFPTQPLN 534
Query: 234 LPS 236
+
Sbjct: 535 SST 537
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 95.9 bits (239), Expect = 5e-21
Identities = 32/192 (16%), Positives = 52/192 (27%), Gaps = 36/192 (18%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGI-------IPKELGLLKRLKILDLG 126
IN+S + + F + L + L GN L I + L +DL
Sbjct: 437 SINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLR 496
Query: 127 TNQLTGPIPPEI--GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA 184
N+LT + + L LV I+L N + P + N +L+ + R
Sbjct: 497 FNKLTK-LSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRD------ 548
Query: 185 GSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSF 239
A + L N K +
Sbjct: 549 --------------AQGNRTLREWPEGITLCPSLTQLQIGSNDIRKVNEKITPNISVLDI 594
Query: 240 QGNCLQNKDPKQ 251
+ N + D
Sbjct: 595 KDNPNISIDLSY 606
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 1e-19
Identities = 28/163 (17%), Positives = 50/163 (30%), Gaps = 17/163 (10%)
Query: 74 KINISGSSLKGF-------LAPELGLLTYLQELILHGNNLIGIIPK-ELGLLKRLKILDL 125
IN+ G+ L L + L N L + L L +DL
Sbjct: 461 SINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTKLSDDFRATTLPYLVGIDL 520
Query: 126 GTNQLTGPIPPEIGNLTGLVKINLQ------SNGLTGRLPAELGNLISLEELHLDRNRLQ 179
N + P + N + L ++ N P + SL +L + N ++
Sbjct: 521 SYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIR 579
Query: 180 GAVPAGSNSG-YTANIHGMYASSANLTGLCHLSQLKVADFSYN 221
V +I S +L+ +C + + Y+
Sbjct: 580 K-VNEKITPNISVLDIKDNPNISIDLSYVCPYIEAGMYMLFYD 621
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 82.8 bits (205), Expect = 6e-17
Identities = 34/251 (13%), Positives = 64/251 (25%), Gaps = 60/251 (23%)
Query: 31 ALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGFLAPEL 90
+ +D + W+AL+ G
Sbjct: 20 IKLSRTAEYIKDYLALKEIWDALNGKNWSQQGFGT----------------------QPG 57
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150
+ +EL + G G+ L R+ L L +G +P IG LT L + L
Sbjct: 58 ANWNFNKELDMWGA-QPGV---SLNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALG 113
Query: 151 SNGLTG----RLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG 206
S+G P + +S E+ R Q +++ +S
Sbjct: 114 SHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQK 173
Query: 207 ----------------------------LCHLSQLKVADFSYNFFVGSIPKCLEYLPSTS 238
+ L++L+ + FV E + +
Sbjct: 174 SIKKSSRITLKDTQIGQLSNNITFVSKAVMRLTKLRQFYMGNSPFVAENI--CEAWENEN 231
Query: 239 FQGNCLQNKDP 249
+ +
Sbjct: 232 SEYAQQYKTED 242
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 80.9 bits (200), Expect = 2e-16
Identities = 17/112 (15%), Positives = 40/112 (35%), Gaps = 10/112 (8%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQEL------ILHGNNLIGIIPKELGLLKRLKILDLGT 127
I++S +S + + L+ GN + P+ + L L L +G+
Sbjct: 517 GIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGS 575
Query: 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
N + + +I + ++++ N + + I L ++ Q
Sbjct: 576 NDIRK-VNEKI--TPNISVLDIKDNPNISIDLSYVCPYIEAGMYMLFYDKTQ 624
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 1e-25
Identities = 32/171 (18%), Positives = 56/171 (32%), Gaps = 20/171 (11%)
Query: 348 VRFSRQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYF 405
V + L + V+K + +AV K
Sbjct: 12 VDLGTENLYFQSMPLQLLEVKARGRFGCVWKAQLLNE-YVAV-----KIFPIQDKQSWQN 65
Query: 406 QREVADLARINHENTGKLLGYCRESSPFT--RMLVFDYASNGTLYEHLHYGERCQVSWTR 463
+ EV L + HEN + +G + + L+ + G+L + L VSW
Sbjct: 66 EYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLK---ANVVSWNE 122
Query: 464 RMKIVIGIARGLKYLHTELGPPFTISE-------LNSSAVYLTEDFSPKVS 507
I +ARGL YLH ++ + + S V L + + ++
Sbjct: 123 LCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA 173
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 2e-25
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 4/147 (2%)
Query: 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
+F + + ++KG +G +I V L K W+ F E L +H N
Sbjct: 13 NFLTKLNENHSGELWKGRWQGN-DIVVKVL--KVRDWSTRKSRDFNEECPRLRIFSHPNV 69
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
+LG C+ L+ + G+LY LH G V ++ +K + +ARG+ +LHT
Sbjct: 70 LPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT 129
Query: 481 ELGPPFTISELNSSAVYLTEDFSPKVS 507
L P LNS +V + ED + ++S
Sbjct: 130 -LEPLIPRHALNSRSVMIDEDMTARIS 155
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 3e-25
Identities = 36/186 (19%), Positives = 63/186 (33%), Gaps = 12/186 (6%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+N++ + L+ A + L L + N + + P+ L LK+L+L N+L+
Sbjct: 30 LNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLS 89
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANI 194
T L +++L SN + +L L L N L G+ N+
Sbjct: 90 DKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSS-TKLGTQVQLE-NL 147
Query: 195 HGMYASSANLTGL-------CHLSQLKVADFSYNFFVGSIPKCLEYLPS---TSFQGNCL 244
+ S+ + L S LK + S N P C + L
Sbjct: 148 QELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQL 207
Query: 245 QNKDPK 250
+
Sbjct: 208 GPSLTE 213
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 5e-23
Identities = 34/189 (17%), Positives = 65/189 (34%), Gaps = 13/189 (6%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++++ +S++ L L L N L L+ L+ L L N++
Sbjct: 101 ELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQAL 160
Query: 134 IPPEIG--NLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG-SNSGY 190
E+ + L K+ L SN + P + L L L+ +L ++
Sbjct: 161 KSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELA 220
Query: 191 TANIHGMYASSANLTGL-------CHLSQLKVADFSYNFFVGSIPKCLEYLPST---SFQ 240
+I + S++ L+ + L + D SYN +LP +
Sbjct: 221 NTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLE 280
Query: 241 GNCLQNKDP 249
N +Q+
Sbjct: 281 YNNIQHLFS 289
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 2e-22
Identities = 33/176 (18%), Positives = 54/176 (30%), Gaps = 14/176 (7%)
Query: 75 INISGSSLKGFLAP-ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG- 132
+++ + + L E L + E+ L N + + L+ L+ L L L
Sbjct: 410 LDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNV 469
Query: 133 -PIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYT 191
P L L ++L +N + L L LE L L N L + G
Sbjct: 470 DSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPI 529
Query: 192 ANIHGM------YASSANLTGLC-----HLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ G+ S + L +LK+ D N S
Sbjct: 530 YFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVS 585
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 95.5 bits (238), Expect = 6e-21
Identities = 37/169 (21%), Positives = 59/169 (34%), Gaps = 12/169 (7%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150
L T + L L N L + +L LD+G N ++ P L L +NLQ
Sbjct: 22 DLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQ 81
Query: 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL--- 207
N L+ +L ELHL N +Q + N+ + S L+
Sbjct: 82 HNELSQLSDKTFAFCTNLTELHLMSNSIQK-IKNNPFVKQK-NLITLDLSHNGLSSTKLG 139
Query: 208 --CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ-----GNCLQNKDP 249
L L+ S N + L+ ++S + N ++ P
Sbjct: 140 TQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSP 188
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 1e-19
Identities = 32/145 (22%), Positives = 47/145 (32%), Gaps = 20/145 (13%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPP-EIGNLTGLVKINLQS 151
+ L L L N + I L L++LDLG N++ + E L + +I L
Sbjct: 380 HSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSY 439
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLS 211
N + SL+ L L R L+ V + + L
Sbjct: 440 NKYLQLTRNSFALVPSLQRLMLRRVALKN-VDSSPSP------------------FQPLR 480
Query: 212 QLKVADFSYNFFVGSIPKCLEYLPS 236
L + D S N LE L
Sbjct: 481 NLTILDLSNNNIANINDDMLEGLEK 505
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 4e-19
Identities = 37/213 (17%), Positives = 66/213 (30%), Gaps = 25/213 (11%)
Query: 44 HLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLL--TYLQELIL 101
L L+N L + ++ R L ++S S L L T L L L
Sbjct: 199 GLFLNN-VQLGPSLTEKLCLELANTSIRNL--SLSNSQLSTTSNTTFLGLKWTNLTMLDL 255
Query: 102 HGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRL--- 158
NNL + L +L+ L N + + L + +NL+ + +
Sbjct: 256 SYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLA 315
Query: 159 ------PAELGNLISLEELHLDRNRLQGAVPAGSNSGYTA---------NIHGMYASSAN 203
L LE L+++ N + G + + +G ++
Sbjct: 316 SLPKIDDFSFQWLKCLEHLNMEDNDIPG-IKSNMFTGLINLKYLSLSNSFTSLRTLTNET 374
Query: 204 LTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
L H S L + + + N +L
Sbjct: 375 FVSLAH-SPLHILNLTKNKISKIESDAFSWLGH 406
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 3e-18
Identities = 37/172 (21%), Positives = 54/172 (31%), Gaps = 31/172 (18%)
Query: 75 INISGSSLKGF--LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT- 131
+ + +LK L L L L NN+ I L L++L+ILDL N L
Sbjct: 459 LMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLAR 518
Query: 132 -------GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA 184
G + L+ L +NL+SNG +L L+ + L N L +PA
Sbjct: 519 LWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNT-LPA 577
Query: 185 GSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ LK + N K
Sbjct: 578 SV--------------------FNNQVSLKSLNLQKNLITSVEKKVFGPAFR 609
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 86.6 bits (215), Expect = 5e-18
Identities = 38/175 (21%), Positives = 58/175 (33%), Gaps = 12/175 (6%)
Query: 73 LKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT- 131
K +IS +SL L L+ L + N++ GI L LK L L + +
Sbjct: 308 TKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSL 367
Query: 132 GPIPPEIG---NLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNS 188
+ E + L +NL N ++ L LE L L N + +
Sbjct: 368 RTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWR 427
Query: 189 GYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFF--VGSIPKCLEYLPS 236
G NI +Y S L + L+ V S P + L +
Sbjct: 428 GLE-NIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRN 481
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 2e-17
Identities = 32/144 (22%), Positives = 51/144 (35%), Gaps = 9/144 (6%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNL--------IGIIPKELGLLKRLKILDL 125
+++S +++ L L L+ L L NNL G L L L IL+L
Sbjct: 484 ILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNL 543
Query: 126 GTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG 185
+N +L L I+L N L + N +SL+ L+L +N + V
Sbjct: 544 ESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITS-VEKK 602
Query: 186 SNSGYTANIHGMYASSANLTGLCH 209
N+ + C
Sbjct: 603 VFGPAFRNLTELDMRFNPFDCTCE 626
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 3e-11
Identities = 21/144 (14%), Positives = 43/144 (29%), Gaps = 28/144 (19%)
Query: 119 RLKILDL---------------------GTNQLTGPIPPEIGNLTGLVKINLQSNGLTGR 157
++ D NQL + L +++ N ++
Sbjct: 5 SHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKL 64
Query: 158 LPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQ 212
P L L+ L+L N L + + + T N+ ++ S ++ +
Sbjct: 65 EPELCQKLPMLKVLNLQHNELSQ-LSDKTFAFCT-NLTELHLMSNSIQKIKNNPFVKQKN 122
Query: 213 LKVADFSYNFFVGSIPKCLEYLPS 236
L D S+N + L +
Sbjct: 123 LITLDLSHNGLSSTKLGTQVQLEN 146
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 2e-09
Identities = 19/109 (17%), Positives = 36/109 (33%), Gaps = 1/109 (0%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+N+ + L L+ + L NNL + LK L+L N +T
Sbjct: 541 LNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVE 600
Query: 135 PPEIG-NLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAV 182
G L +++++ N + + + E H + L
Sbjct: 601 KKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHY 649
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 95.0 bits (237), Expect = 1e-21
Identities = 35/174 (20%), Positives = 61/174 (35%), Gaps = 27/174 (15%)
Query: 86 LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLV 145
+ E L LQ L L + + P + L+ LK L + + L+ + P I +L L
Sbjct: 175 ASGEHQGLVNLQSLRLEWTGIRSL-PASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLE 232
Query: 146 KINLQSNGLTGRLPAELGNLISLEELHL-DRNRLQGAVPAGSNSGYTANIHGMYASSANL 204
+++L+ P G L+ L L D + L +P
Sbjct: 233 ELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLL-TLPLD------------------- 272
Query: 205 TGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS--TSFQGNCLQNKDPKQRATTL 256
+ L+QL+ D + +P + LP+ LQ + + R
Sbjct: 273 --IHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQLDQHRPVAR 324
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 91.9 bits (229), Expect = 1e-20
Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 3/104 (2%)
Query: 76 NISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDL-GTNQLTGPI 134
I S L L P + L L+EL L G + P G LK L L + L +
Sbjct: 212 KIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLT-L 269
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRL 178
P +I LT L K++L+ RLP+ + L + + + +
Sbjct: 270 PLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 90.0 bits (224), Expect = 5e-20
Identities = 34/173 (19%), Positives = 60/173 (34%), Gaps = 36/173 (20%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDL-GTNQLTG 132
+ I + L L + L+ L L N L +P + L RL+ L + +LT
Sbjct: 108 HMTIDAAGLME-LPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTE 165
Query: 133 PIPPEIGN---------LTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183
+P + + L L + L+ G+ LPA + NL +L+ L + + L A+
Sbjct: 166 -LPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALG 222
Query: 184 AGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ HL +L+ D + + P
Sbjct: 223 P---------------------AIHHLPKLEELDLRGCTALRNYPPIFGGRAP 254
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 1e-12
Identities = 25/177 (14%), Positives = 51/177 (28%), Gaps = 31/177 (17%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILD--------------------LGTNQLTG 132
+ + L G+ + L +R D L
Sbjct: 11 SSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKA 70
Query: 133 PIPPEIGNLT--GLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGY 190
+ + T G V + L+S L + P + L L+ + +D L +P
Sbjct: 71 -TADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELP--DTMQQ 125
Query: 191 TANIHGMYASSANLTGL----CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNC 243
A + + + L L L++L+ + +P+ L ++
Sbjct: 126 FAGLETLTLARNPLRALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGL 182
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 4e-12
Identities = 17/93 (18%), Positives = 32/93 (34%)
Query: 76 NISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP 135
++ G + P G L+ LIL + + +P ++ L +L+ LDL +P
Sbjct: 235 DLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLP 294
Query: 136 PEIGNLTGLVKINLQSNGLTGRLPAELGNLISL 168
I L I + + +
Sbjct: 295 SLIAQLPANCIILVPPHLQAQLDQHRPVARPAE 327
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 2e-20
Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 9/171 (5%)
Query: 340 DSEILKDVVRFSRQELEVACED--FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHW 397
+E L ++++ D IG+ V++ G ++AV + E+ +
Sbjct: 17 TTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGS-DVAV--KILMEQDF 73
Query: 398 TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH-YGER 456
F REVA + R+ H N +G + +V +Y S G+LY LH G R
Sbjct: 74 HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL--SIVTEYLSRGSLYRLLHKSGAR 131
Query: 457 CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVS 507
Q+ RR+ + +A+G+ YLH PP L S + + + ++ KV
Sbjct: 132 EQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVC 181
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 92.4 bits (230), Expect = 5e-20
Identities = 34/167 (20%), Positives = 54/167 (32%), Gaps = 20/167 (11%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
I++S + LK + + LQ L L + I K L L L L N +
Sbjct: 36 NIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSF 95
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
P LT L + L +G LI+L++L++ N +
Sbjct: 96 SPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAY------- 148
Query: 194 IHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
+L+ L D SYN+ L++L
Sbjct: 149 -------------FSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQV 182
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 82.4 bits (204), Expect = 8e-17
Identities = 26/107 (24%), Positives = 37/107 (34%), Gaps = 1/107 (0%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKE-LGLLKRLKILDLGTNQLTGP 133
++IS ++ K LT L L + GN+ L LDL QL
Sbjct: 429 LDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQI 488
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
L L +N+ N L + L SL L NR++
Sbjct: 489 SWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIET 535
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 80.1 bits (198), Expect = 4e-16
Identities = 22/104 (21%), Positives = 34/104 (32%), Gaps = 1/104 (0%)
Query: 76 NISGSSLKGFLAPE-LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
++G+S K T L L L L I L RL++L++ N L
Sbjct: 454 KMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLD 513
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRL 178
L L ++ N + SL +L N +
Sbjct: 514 SSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSV 557
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 79.7 bits (197), Expect = 6e-16
Identities = 28/165 (16%), Positives = 43/165 (26%), Gaps = 23/165 (13%)
Query: 74 KINISGSSLKGFLAPE-LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG 132
++ S+LK L L L + N L L L + N
Sbjct: 403 HLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKD 462
Query: 133 PIPPEI-GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYT 191
+ N T L ++L L L L+ L++ N L + +
Sbjct: 463 NTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLF-LDSSH----- 516
Query: 192 ANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
L L D S+N S + S
Sbjct: 517 ---------------YNQLYSLSTLDCSFNRIETSKGILQHFPKS 546
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 3e-14
Identities = 31/188 (16%), Positives = 57/188 (30%), Gaps = 32/188 (17%)
Query: 80 SSLKGFLAPELGLLTYLQELILHGN-------------------------NLIGIIPKEL 114
+ KG ++ + L L L L N N I+
Sbjct: 336 TMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMSANF 395
Query: 115 GLLKRLKILDLGTNQLTGPIPPE-IGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHL 173
L+ L+ LD + L +L L+ +++ L SL L +
Sbjct: 396 MGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKM 455
Query: 174 DRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLC-----HLSQLKVADFSYNFFVGSIP 228
N + + + T N+ + S L + L +L++ + S+N +
Sbjct: 456 AGNSFKDNTLSNVFANTT-NLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDS 514
Query: 229 KCLEYLPS 236
L S
Sbjct: 515 SHYNQLYS 522
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 70.4 bits (173), Expect = 5e-13
Identities = 28/169 (16%), Positives = 54/169 (31%), Gaps = 20/169 (11%)
Query: 74 KINISGSSLKGF-LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKI----LDLGTN 128
K+N++ + + L LT L + L N + I +L L+ LD+ N
Sbjct: 132 KLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLN 191
Query: 129 QLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSN 187
+ I + L ++ L+ N + + L NL L L +
Sbjct: 192 PIDF-IQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKD------- 243
Query: 188 SGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ + + GLC ++ + +Y L +
Sbjct: 244 -----ERNLEIFEPSIMEGLCDVTIDEF-RLTYTNDFSDDIVKFHCLAN 286
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 3e-10
Identities = 30/193 (15%), Positives = 55/193 (28%), Gaps = 32/193 (16%)
Query: 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIP-------KELGL------- 116
+ + ++ ++ + L + + L G ++ + + L +
Sbjct: 262 TIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQ 321
Query: 117 -----LKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLT--GRLPAELGNLISLE 169
L LK L L N+ + I + L L ++L N L+ G SL
Sbjct: 322 FPTLDLPFLKSLTLTMNKGS--ISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLR 379
Query: 170 ELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL------CHLSQLKVADFSYNFF 223
L L N + + + L + L +L D SY
Sbjct: 380 HLDLSFNGAIIMSANFMGL---EELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNT 436
Query: 224 VGSIPKCLEYLPS 236
L S
Sbjct: 437 KIDFDGIFLGLTS 449
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 6e-10
Identities = 18/78 (23%), Positives = 28/78 (35%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+++S L+ L LQ L + NNL+ + L L LD N++
Sbjct: 478 LDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSK 537
Query: 135 PPEIGNLTGLVKINLQSN 152
L NL +N
Sbjct: 538 GILQHFPKSLAFFNLTNN 555
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 1e-06
Identities = 26/178 (14%), Positives = 49/178 (27%), Gaps = 20/178 (11%)
Query: 75 INISGSSLKGFLAPELGLLTYL----QELILHGNNLIGIIPKELGLLKRLKILDLGTNQL 130
+++S + ++ +L L L + N + I + +K L L L N
Sbjct: 158 VDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIK-LHELTLRGNFN 216
Query: 131 TGPIPPE-IGNLTGLVKINLQSNGLTGRL------PAELGNLISLEELHLDRNRLQGAVP 183
+ I + NL GL L P+ + L +
Sbjct: 217 SSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSD 276
Query: 184 AGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGSIP----KCLEYL 234
AN+ M + ++ L + + P L+ L
Sbjct: 277 DIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQL-KQFPTLDLPFLKSL 333
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 7e-05
Identities = 11/58 (18%), Positives = 19/58 (32%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131
+N+S ++L + L L L N + K L +L N +
Sbjct: 501 LLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVA 558
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 92.6 bits (230), Expect = 7e-20
Identities = 26/170 (15%), Positives = 42/170 (24%), Gaps = 26/170 (15%)
Query: 76 NISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT---- 131
I + + + L N + + + + L N +T
Sbjct: 655 KIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPE 714
Query: 132 ---GPIPPEIGNLTGLVKINLQSNGLTGRLPAEL--GNLISLEELHLDRNRLQGAVPAGS 186
P N L I+L+ N LT L + L L + + N P
Sbjct: 715 NSLKPKDGNYKNTYLLTTIDLRFNKLTS-LSDDFRATTLPYLSNMDVSYNCFSS-FP--- 769
Query: 187 NSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
N + L D N + P + PS
Sbjct: 770 ------------TQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPS 807
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 92.2 bits (229), Expect = 8e-20
Identities = 26/164 (15%), Positives = 50/164 (30%), Gaps = 19/164 (11%)
Query: 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQL 130
+ +I + + ++ + LT LQ + + + +
Sbjct: 426 KDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWED-----ANSDYAKQ 479
Query: 131 TGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNS-- 188
NL L + L + +LP L +L L+ L++ NR A ++
Sbjct: 480 YENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTR 539
Query: 189 -----GYTANIHGMYASSANLTG------LCHLSQLKVADFSYN 221
I Y NL L + +L + D +N
Sbjct: 540 LADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHN 583
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 92.2 bits (229), Expect = 9e-20
Identities = 26/197 (13%), Positives = 58/197 (29%), Gaps = 28/197 (14%)
Query: 44 HLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHG 103
+ S N + ++ + + + +S + ++ F + + +IL
Sbjct: 648 SVDFSY-NKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSN 706
Query: 104 NNL-------IGIIPKELGLLKRLKILDLGTNQLTGPIPPEI--GNLTGLVKINLQSNGL 154
N + + L +DL N+LT + + L L +++ N
Sbjct: 707 NLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLTS-LSDDFRATTLPYLSNMDVSYNCF 765
Query: 155 TGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLK 214
+ P + N L+ + R A N I + + + L
Sbjct: 766 SS-FPTQPLNSSQLKAFGIRHQRD-----AEGN-----RILRQWPTG-----ITTCPSLI 809
Query: 215 VADFSYNFFVGSIPKCL 231
N + + L
Sbjct: 810 QLQIGSNDI-RKVDEKL 825
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 82.6 bits (204), Expect = 9e-17
Identities = 31/191 (16%), Positives = 49/191 (25%), Gaps = 44/191 (23%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG-PIPPEIGNLTGLVK 146
G L +L L N + I +++ L N+L P ++ +
Sbjct: 589 EAFGTNVKLTDLKLDYNQIEEIPEDFCAFTDQVEGLGFSHNKLKYIPNIFNAKSVYVMGS 648
Query: 147 INLQSNGLTGRLPAELG------NLISLEELHLDRNRLQG-------------------- 180
++ N + + I+ + L N +Q
Sbjct: 649 VDFSYNKIGS-EGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNN 707
Query: 181 ---AVPAGSNSGYTANIHGMYA------SSANLTGL------CHLSQLKVADFSYNFFVG 225
++P S N Y LT L L L D SYN F
Sbjct: 708 LMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLTSLSDDFRATTLPYLSNMDVSYNCF-S 766
Query: 226 SIPKCLEYLPS 236
S P
Sbjct: 767 SFPTQPLNSSQ 777
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 81.8 bits (202), Expect = 2e-16
Identities = 30/199 (15%), Positives = 59/199 (29%), Gaps = 13/199 (6%)
Query: 41 EDPHLVLSNWNALDADPCHWTGIACSDARDRV-LKINISGSSLKGFLAPELGLLTYLQEL 99
+D + + W ALD + ++ + N +L + L
Sbjct: 269 KDYKALKAIWEALDGKNWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGL 328
Query: 100 ILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLP 159
L G G +P +G L LK+L GT+ T + + +
Sbjct: 329 SLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYK 388
Query: 160 AE-LGNLISLEELHLDRNRLQ-----GAVPAGSNSGYTANIHGMYASSANLTGL----CH 209
L L L ++ + + S G + +T +
Sbjct: 389 KMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGN--LTNRITFISKAIQR 446
Query: 210 LSQLKVADFSYNFFVGSIP 228
L++L++ F+ + F
Sbjct: 447 LTKLQIIYFANSPFTYDNI 465
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 67.6 bits (165), Expect = 5e-12
Identities = 14/112 (12%), Positives = 36/112 (32%), Gaps = 10/112 (8%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQEL------ILHGNNLIGIIPKELGLLKRLKILDLGT 127
+++S + + + L+ GN ++ P + L L +G+
Sbjct: 757 NMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGS 815
Query: 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
N + + ++ L +++ N + I L ++ Q
Sbjct: 816 NDIRK-VDEKL--TPQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQ 864
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 65.3 bits (159), Expect = 3e-11
Identities = 18/141 (12%), Positives = 44/141 (31%), Gaps = 8/141 (5%)
Query: 104 NNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELG 163
+ +L R+ L L G +P IG LT L ++ ++ T
Sbjct: 309 DMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGD 368
Query: 164 NLISLEELHLDRNRLQGAVPAG-----SNSGYTANIHGMYASSANLTGLCHLSQLKVADF 218
++ + ++R++ + + + + + S++ + D
Sbjct: 369 EELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDT 428
Query: 219 SY---NFFVGSIPKCLEYLPS 236
+ I K ++ L
Sbjct: 429 QIGNLTNRITFISKAIQRLTK 449
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 3e-19
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 361 DFSNIIGSSPDSLVYKGTMKG-GPEIAV---ISLCIKEEHWTGYLELYFQREVADLARIN 416
++ IG LV+KG + +A+ I + E FQREV ++ +N
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
H N KL G P +V ++ G LY L + + W+ ++++++ IA G++
Sbjct: 82 HPNIVKLYGLMHN--PP--RMVMEFVPCGDLYHRLL-DKAHPIKWSVKLRLMLDIALGIE 136
Query: 477 YLHTELGPP 485
Y+ + PP
Sbjct: 137 YMQNQ-NPP 144
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 5e-19
Identities = 30/135 (22%), Positives = 49/135 (36%), Gaps = 9/135 (6%)
Query: 349 RFSRQELEVACED--FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQ 406
QE ++ E +IG VY G G E+A+ + E F+
Sbjct: 22 SIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLI--DIERDNEDQLKAFK 77
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMK 466
REV + HEN +G C ++ TLY + + + + +
Sbjct: 78 REVMAYRQTRHENVVLFMGACMSPPHL--AIITSLCKGRTLYSVVR-DAKIVLDVNKTRQ 134
Query: 467 IVIGIARGLKYLHTE 481
I I +G+ YLH +
Sbjct: 135 IAQEIVKGMGYLHAK 149
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 88.5 bits (220), Expect = 9e-19
Identities = 32/165 (19%), Positives = 46/165 (27%), Gaps = 21/165 (12%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+ S + L L L L L + I RL L L N L
Sbjct: 38 LEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMA 97
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANI 194
+ L + G++ L N +LE L+L N +
Sbjct: 98 ETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHI---------------- 141
Query: 195 HGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSF 239
SS L +LKV DF N + + L +
Sbjct: 142 -----SSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATN 181
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 88.1 bits (219), Expect = 1e-18
Identities = 33/172 (19%), Positives = 59/172 (34%), Gaps = 6/172 (3%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+ ++ + L L L+ L + I L K L+ L LG+N ++
Sbjct: 86 LVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIK 145
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLE--ELHLDRNRLQGAVPAGSNSGY-- 190
P+ L ++ Q+N + ++ +L L+L+ N + G P +S
Sbjct: 146 LPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQ 205
Query: 191 TANIHGMYASSANLTGL--CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
+ N G GL + L + F P E L S +
Sbjct: 206 SLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVE 257
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 87.4 bits (217), Expect = 2e-18
Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 7/165 (4%)
Query: 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQL 130
V IN+ + + LQEL L + + +P L L LK L L N+
Sbjct: 255 SVESINLQKHYFFNISSNTFHCFSGLQELDLTATH-LSELPSGLVGLSTLKKLVLSANKF 313
Query: 131 TGPIPPEIGNLTGLVKINLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSG 189
N L ++++ N L L NL +L EL L + ++ +
Sbjct: 314 ENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLR 373
Query: 190 YTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFVGSIPK 229
+++ + S L QL++ D ++ +
Sbjct: 374 NLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQ 418
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 82.0 bits (203), Expect = 1e-16
Identities = 31/173 (17%), Positives = 53/173 (30%), Gaps = 9/173 (5%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKE-LGLLKRLKILDLGTNQLT- 131
K+ +S + + L L + GN + L L+ L+ LDL + +
Sbjct: 305 KLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIET 364
Query: 132 -GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGY 190
++ NL+ L +NL N LE L L RL+
Sbjct: 365 SDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNL 424
Query: 191 TANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFVGSIPKCLEYLPSTS 238
+ + S + L L L+ + N F + L +
Sbjct: 425 H-LLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLG 476
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 78.1 bits (193), Expect = 2e-15
Identities = 30/154 (19%), Positives = 52/154 (33%), Gaps = 8/154 (5%)
Query: 75 INISGSSLKGFLAPE-LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++++ + LK A L L+ L L + L + L L+ L+L N
Sbjct: 405 LDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKG 464
Query: 134 I---PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGY 190
+ L L + L L+ +L + + L NRL + S
Sbjct: 465 NIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTS-SSIEALSHL 523
Query: 191 TA---NIHGMYASSANLTGLCHLSQLKVADFSYN 221
N+ + S + L LSQ + + N
Sbjct: 524 KGIYLNLASNHISIILPSLLPILSQQRTINLRQN 557
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 78.1 bits (193), Expect = 2e-15
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 4/108 (3%)
Query: 76 NISGSSLKGF---LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG 132
N+ G+ L L L+ L+L +L I LK + +DL N+LT
Sbjct: 455 NLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTS 514
Query: 133 PIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
+ +L G+ +NL SN ++ LP+ L L ++L +N L
Sbjct: 515 SSIEALSHLKGIY-LNLASNHISIILPSLLPILSQQRTINLRQNPLDC 561
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 76.2 bits (188), Expect = 8e-15
Identities = 24/172 (13%), Positives = 53/172 (30%), Gaps = 11/172 (6%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKI--LDLGTNQLT 131
+ + + + P+ L+ L N + + +++ L++ L+L N +
Sbjct: 133 SLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIA 192
Query: 132 GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGN--LISLEELHLDRNRLQGAVPAGSNSG 189
G I P + +N + L N + SL + + PA
Sbjct: 193 G-IEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGL 251
Query: 190 YTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
++ + + S L+ D + +P L L +
Sbjct: 252 CEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHL-SELPSGLVGLST 302
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 6e-13
Identities = 19/140 (13%), Positives = 30/140 (21%), Gaps = 24/140 (17%)
Query: 97 QELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTG 156
+ L I L + L+ N L L L ++L +
Sbjct: 15 KTYNCENLGLNEIPG---TLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYW 71
Query: 157 RLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVA 216
+ L+ L L N L + + L LK
Sbjct: 72 IHEDTFQSQHRLDTLVLTANPLIF-MAETA--------------------LSGPKALKHL 110
Query: 217 DFSYNFFVGSIPKCLEYLPS 236
F L +
Sbjct: 111 FFIQTGISSIDFIPLHNQKT 130
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 1e-07
Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+ +S L L + + L N L + L LK + L+L +N ++
Sbjct: 480 ILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISII 538
Query: 134 IPPEIGNLTGLVKINLQSN 152
+P + L+ INL+ N
Sbjct: 539 LPSLLPILSQQRTINLRQN 557
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 86.4 bits (215), Expect = 1e-18
Identities = 34/152 (22%), Positives = 60/152 (39%), Gaps = 13/152 (8%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
+ LT L L L+ N + I P L L L NQ+T P + N+T L +
Sbjct: 171 TPIANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSL 226
Query: 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASS---ANL 204
+ +N +T + L NL L L + N++ + + + S +++
Sbjct: 227 KIGNNKITD--LSPLANLSQLTWLEIGTNQISDINAVKDLT----KLKMLNVGSNQISDI 280
Query: 205 TGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ L +LSQL + N + + L +
Sbjct: 281 SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTN 312
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 82.6 bits (205), Expect = 2e-17
Identities = 32/148 (21%), Positives = 59/148 (39%), Gaps = 29/148 (19%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+ I + + L L+ L L + N + I + L +LK+L++G+NQ++
Sbjct: 225 SLKIGNNKITDL--SPLANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI 280
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
+ NL+ L + L +N L +G L +L L L +N +
Sbjct: 281 --SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHIT-------------- 324
Query: 194 IHGMYASSANLTGLCHLSQLKVADFSYN 221
++ L LS++ ADF+
Sbjct: 325 ---------DIRPLASLSKMDSADFANQ 343
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 81.4 bits (202), Expect = 4e-17
Identities = 30/151 (19%), Positives = 61/151 (40%), Gaps = 14/151 (9%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++ ++ ++ L LT + L L N+ + + L + L L + +++
Sbjct: 114 ELYLNEDNISDI--SPLANLTKMYSLNLGANHNLSDL-SPLSNMTGLNYLTVTESKVKDV 170
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
P I NLT L ++L N + + L +L SL N++ P + +
Sbjct: 171 TP--IANLTDLYSLSLNYNQIED-ISP-LASLTSLHYFTAYVNQITDITPVANMT----R 222
Query: 194 IHGMYASSANLT---GLCHLSQLKVADFSYN 221
++ + + +T L +LSQL + N
Sbjct: 223 LNSLKIGNNKITDLSPLANLSQLTWLEIGTN 253
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 77.6 bits (192), Expect = 9e-16
Identities = 30/165 (18%), Positives = 65/165 (39%), Gaps = 32/165 (19%)
Query: 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131
++ + +S+ L + +L++ G + I + + L L+ L+L NQ+T
Sbjct: 24 GIRAVLQKASVTDV--VTQEELESITKLVVAGEKVASI--QGIEYLTNLEYLNLNGNQIT 79
Query: 132 GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYT 191
P + NL L + + +N +T + L NL +L EL+L+ + +
Sbjct: 80 DISP--LSNLVKLTNLYIGTNKITD--ISALQNLTNLRELYLNEDNISD----------- 124
Query: 192 ANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
++ L +L+++ + N + S L +
Sbjct: 125 ------------ISPLANLTKMYSLNLGANHNL-SDLSPLSNMTG 156
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 73.7 bits (182), Expect = 2e-14
Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 4/92 (4%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
+ LT L+ L + N + I L L +L L L NQL IG LT L +
Sbjct: 259 NAVKDLTKLKMLNVGSNQISDISV--LNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTL 316
Query: 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
L N +T + L +L ++ ++
Sbjct: 317 FLSQNHITD-IRP-LASLSKMDSADFANQVIK 346
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 63.7 bits (156), Expect = 4e-11
Identities = 19/129 (14%), Positives = 44/129 (34%), Gaps = 13/129 (10%)
Query: 96 LQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLT 155
L + I P L L +T + L + K+ + +
Sbjct: 2 AATLATLPAPINQIFP--DADLAEGIRAVLQKASVTDVVT--QEELESITKLVVAGEKVA 57
Query: 156 GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASS---ANLTGLCHLSQ 212
+ L +LE L+L+ N++ P + + +Y + +++ L +L+
Sbjct: 58 S--IQGIEYLTNLEYLNLNGNQITDISPLSNLV----KLTNLYIGTNKITDISALQNLTN 111
Query: 213 LKVADFSYN 221
L+ + +
Sbjct: 112 LRELYLNED 120
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 59.5 bits (145), Expect = 8e-10
Identities = 17/82 (20%), Positives = 33/82 (40%), Gaps = 4/82 (4%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+N+ + + L L+ L L L+ N L + +G L L L L N +T
Sbjct: 269 MLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDI 326
Query: 134 IPPEIGNLTGLVKINLQSNGLT 155
P + +L+ + + + +
Sbjct: 327 RP--LASLSKMDSADFANQVIK 346
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 85.4 bits (212), Expect = 2e-18
Identities = 37/175 (21%), Positives = 68/175 (38%), Gaps = 25/175 (14%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++ SSLK LA ++EL L GN L I +L +L++L+L +N L
Sbjct: 14 IEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYE- 72
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
++ +L+ L ++L +N + EL S+E LH N + V
Sbjct: 73 -TLDLESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNIS-RVSCSRGQ----G 121
Query: 194 IHGMYASSANLTGL-----CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNC 243
+Y ++ +T L S+++ D N ++ + +
Sbjct: 122 KKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNE--------IDTVNFAELAASS 168
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 80.0 bits (198), Expect = 1e-16
Identities = 27/153 (17%), Positives = 53/153 (34%), Gaps = 13/153 (8%)
Query: 89 ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148
EL + ++ L NN+ + + K + L N++T + G + + ++
Sbjct: 94 ELLVGPSIETLHAANNNISRV---SCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLD 150
Query: 149 LQSNGLTG-RLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT-- 205
L+ N + + +LE L+L N + V A + + SS L
Sbjct: 151 LKLNEIDTVNFAELAASSDTLEHLNLQYNFIY-DVKGQVV---FAKLKTLDLSSNKLAFM 206
Query: 206 --GLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ + N V I K L + +
Sbjct: 207 GPEFQSAAGVTWISLRNNKLV-LIEKALRFSQN 238
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 77.3 bits (191), Expect = 1e-15
Identities = 24/149 (16%), Positives = 45/149 (30%), Gaps = 36/149 (24%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
+ + ++L + +K LDL N L+ ++ T L +NL SN
Sbjct: 9 GNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSN 68
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQ 212
L +L +L +L L L+ N + L
Sbjct: 69 VLYE--TLDLESLSTLRTLDLNNNY--------------------------VQELLVGPS 100
Query: 213 LKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
++ + N + + + QG
Sbjct: 101 IETLHAANN--------NISRVSCSRGQG 121
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 5e-12
Identities = 21/137 (15%), Positives = 36/137 (26%), Gaps = 18/137 (13%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
+ L+ L L N L + E + + L N+L I + L
Sbjct: 185 KGQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHF 242
Query: 148 NLQSNGLT-GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG 206
+L+ NG G L ++ + + + G +
Sbjct: 243 DLRGNGFHCGTLRDFFSKNQRVQTVAKQTVK---------------KLTGQNEEECTVPT 287
Query: 207 LCHLSQLKVADFSYNFF 223
L H D F
Sbjct: 288 LGHYGAYCCEDLPAPFA 304
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 5e-07
Identities = 16/87 (18%), Positives = 29/87 (33%), Gaps = 2/87 (2%)
Query: 86 LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT-GPIPPEIGNLTGL 144
+ PE + + L N L+ +I K L + L+ DL N G + +
Sbjct: 206 MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRV 264
Query: 145 VKINLQSNGLTGRLPAELGNLISLEEL 171
+ Q+ E + +L
Sbjct: 265 QTVAKQTVKKLTGQNEEECTVPTLGHY 291
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 85.3 bits (211), Expect = 3e-18
Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 24/173 (13%)
Query: 348 VRFSRQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYF 405
+ + E + ++ +IG VYKG++ +AV F
Sbjct: 1 MEAAASEPSLDLDNLKLLELIGRGRYGAVYKGSLDER-PVAVKVFSFANRQ-------NF 52
Query: 406 QRE--VADLARINHENTGKLLGYCRESSPFTR---MLVFDYASNGTLYEHLHYGERCQVS 460
E + + + H+N + + + R +LV +Y NG+L ++L
Sbjct: 53 INEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLS---LHTSD 109
Query: 461 WTRRMKIVIGIARGLKYLHTELG------PPFTISELNSSAVYLTEDFSPKVS 507
W ++ + RGL YLHTEL P + +LNS V + D + +S
Sbjct: 110 WVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 3e-18
Identities = 31/126 (24%), Positives = 46/126 (36%), Gaps = 6/126 (4%)
Query: 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
IIG VY+ G E+AV + + ++E A + H N
Sbjct: 10 TLEEIIGIGGFGKVYRAFWIGD-EVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNI 68
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
L G C + LV ++A G L L ++ + + IARG+ YLH
Sbjct: 69 IALRGVCLKEPNL--CLVMEFARGGPLNRVLS---GKRIPPDILVNWAVQIARGMNYLHD 123
Query: 481 ELGPPF 486
E P
Sbjct: 124 EAIVPI 129
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 86.1 bits (213), Expect = 4e-18
Identities = 37/173 (21%), Positives = 68/173 (39%), Gaps = 25/173 (14%)
Query: 76 NISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP 135
++ SSLK LA ++EL L GN L I +L +L++L+L +N L
Sbjct: 16 KVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYE--T 73
Query: 136 PEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIH 195
++ +L+ L ++L +N + EL S+E LH N + V
Sbjct: 74 LDLESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNIS-RVSCSRGQ----GKK 123
Query: 196 GMYASSANLTGL-----CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNC 243
+Y ++ +T L S+++ D N ++ + +
Sbjct: 124 NIYLANNKITMLRDLDEGCRSRVQYLDLKLNE--------IDTVNFAELAASS 168
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 81.0 bits (200), Expect = 2e-16
Identities = 30/183 (16%), Positives = 61/183 (33%), Gaps = 25/183 (13%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIP-----------------KELGL 116
++++SG+ L A +L T L+ L L N L + +EL +
Sbjct: 38 ELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLDLESLSTLRTLDLNNNYVQELLV 97
Query: 117 LKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRN 176
++ L N ++ + G I L +N +T + G ++ L L N
Sbjct: 98 GPSIETLHAANNNISR-VSCSR--GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLN 154
Query: 177 RLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGSIPKCLEY 233
+ V + + + + + + ++LK D S N + +
Sbjct: 155 EID-TVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLA-FMGPEFQS 212
Query: 234 LPS 236
Sbjct: 213 AAG 215
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 79.1 bits (195), Expect = 8e-16
Identities = 24/151 (15%), Positives = 45/151 (29%), Gaps = 36/151 (23%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150
+ + ++L + +K LDL N L+ ++ T L +NL
Sbjct: 7 QNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLS 66
Query: 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHL 210
SN L +L +L +L L L+ N + L
Sbjct: 67 SNVLYE--TLDLESLSTLRTLDLNNNY--------------------------VQELLVG 98
Query: 211 SQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
++ + N + + + QG
Sbjct: 99 PSIETLHAANN--------NISRVSCSRGQG 121
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 69.5 bits (170), Expect = 8e-13
Identities = 25/161 (15%), Positives = 42/161 (26%), Gaps = 7/161 (4%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
+ L+ L L N L + E + + L N+L I + L
Sbjct: 185 KGQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHF 242
Query: 148 NLQSNGL-TGRLPAELGNLISLEELHLDRNR-LQGAVPAGSNSGYTANIHGMYASSANLT 205
+L+ NG G L ++ + + L G +
Sbjct: 243 DLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPTLGHYGAYCCEDLPAP 302
Query: 206 GLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQN 246
L LK + + GS E L +
Sbjct: 303 FADRLIALKRKEHALLSGQGSE---TERLECERENQARQRE 340
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 53.7 bits (129), Expect = 8e-08
Identities = 22/157 (14%), Positives = 44/157 (28%), Gaps = 7/157 (4%)
Query: 86 LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQL-TGPIPPEIGNLTGL 144
+ PE + + L N L+ +I K L + L+ DL N G + +
Sbjct: 206 MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRV 264
Query: 145 VKINLQSN-GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSAN 203
+ Q+ LTG+ E L + + +
Sbjct: 265 QTVAKQTVKKLTGQNEEECTVPTLGHYGAYCCEDLPAPFADRLIALKRKEHALLSGQGSE 324
Query: 204 LTGL----CHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
L + ++ + D + I + +
Sbjct: 325 TERLECERENQARQREIDALKEQYRTVIDQVTLRKQA 361
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 4e-05
Identities = 10/110 (9%), Positives = 26/110 (23%), Gaps = 6/110 (5%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILH----GNNLIGIIPKELGLLKRLKILDLGTNQL 130
+ + AP L L+ + + E R + +D Q
Sbjct: 289 GHYGAYCCEDLPAPFADRLIALKRKEHALLSGQGSETERLECERENQARQREIDALKEQY 348
Query: 131 TGPIPPEIG-NLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
+ ++ + + + L ++ L+
Sbjct: 349 RT-VIDQVTLRKQAKITLEQKKKALDEQVSNGRRAHAELDGTLQQAVGQI 397
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 41.4 bits (97), Expect = 6e-04
Identities = 14/107 (13%), Positives = 25/107 (23%), Gaps = 1/107 (0%)
Query: 73 LKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG 132
+ S L E +E+ +I + + L+ L
Sbjct: 315 HALLSGQGSETERLECERENQARQREIDALKEQYRTVIDQVTLRKQAKITLEQKKKALDE 374
Query: 133 PIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
+ L Q+ G L L+ L R +
Sbjct: 375 QVSNGRRAHAELDGTLQQAVGQI-ELQHATEEQSPLQLLRAIVKRYE 420
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 4e-18
Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 12/127 (9%)
Query: 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
+ ++G +V K + ++A+ + + E F E+ L+R+NH N
Sbjct: 11 EVEEVVGRGAFGVVCKAKWRAK-DVAIKQIESESE------RKAFIVELRQLSRVNHPNI 63
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGER-CQVSWTRRMKIVIGIARGLKYLH 479
KL G C P LV +YA G+LY LH E + M + ++G+ YLH
Sbjct: 64 VKLYGACLN--PV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 119
Query: 480 TELGPPF 486
+
Sbjct: 120 SMQPKAL 126
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 84.6 bits (210), Expect = 1e-17
Identities = 40/180 (22%), Positives = 70/180 (38%), Gaps = 16/180 (8%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+++++G+ LK L LT L +L L N + + P L L +L L LG NQ++
Sbjct: 225 ELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNI 280
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
P + LT L + L N L + + NL +L L L N + P S +
Sbjct: 281 SP--LAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDISPVSSLT----K 332
Query: 194 IHGMYASSANLTG---LCHLSQLKVADFSYNFFVGSIP-KCLEYLPSTSFQGNCLQNKDP 249
+ ++ + ++ L +L+ + +N P L + N
Sbjct: 333 LQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPV 392
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 2e-16
Identities = 31/173 (17%), Positives = 62/173 (35%), Gaps = 31/173 (17%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++ + + + L LT L L L+ N L I P + LK L L L N ++
Sbjct: 269 ELKLGANQISNI--SPLAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDI 324
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
P + +LT L ++ +N ++ + L NL ++ L N++
Sbjct: 325 SP--VSSLTKLQRLFFYNNKVSD--VSSLANLTNINWLSAGHNQIS-------------- 366
Query: 194 IHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQN 246
+LT L +L+++ + + + + + N
Sbjct: 367 ---------DLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGA 410
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 2e-16
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 15/151 (9%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+ + + + LG+LT L EL L+GN L I L L L LDL NQ++
Sbjct: 203 SLIATNNQISDI--TPLGILTNLDELSLNGNQLKDIGT--LASLTNLTDLDLANNQISNL 258
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
P + LT L ++ L +N ++ + L L +L L L+ N+L+ P + N
Sbjct: 259 AP--LSGLTKLTELKLGANQISN--ISPLAGLTALTNLELNENQLEDISPISNLK----N 310
Query: 194 IHGMYASSANLT---GLCHLSQLKVADFSYN 221
+ + N++ + L++L+ F N
Sbjct: 311 LTYLTLYFNNISDISPVSSLTKLQRLFFYNN 341
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 75.8 bits (187), Expect = 9e-15
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 18/166 (10%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+IN S + L L LT L +++++ N + I P L L L L L NQ+T
Sbjct: 72 QINFSNNQLTDI--TPLKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDI 127
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
P + NLT L ++ L SN ++ + L L SL++L N++ P + +
Sbjct: 128 DP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLSFG-NQVTDLKPLANLT----T 178
Query: 194 IHGMYASSANLT---GLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ + SS ++ L L+ L+ + N P L L +
Sbjct: 179 LERLDISSNKVSDISVLAKLTNLESLIATNNQISDITP--LGILTN 222
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 1e-13
Identities = 33/153 (21%), Positives = 59/153 (38%), Gaps = 15/153 (9%)
Query: 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131
+K + +++ L + L + I + L L ++ NQLT
Sbjct: 26 KMKTVLGKTNVTDT--VSQTDLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLT 81
Query: 132 GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYT 191
P + NLT LV I + +N + L NL +L L L N++ P + +
Sbjct: 82 DITP--LKNLTKLVDILMNNNQIAD--ITPLANLTNLTGLTLFNNQITDIDPLKNLT--- 134
Query: 192 ANIHGMYASSANLTG---LCHLSQLKVADFSYN 221
N++ + SS ++ L L+ L+ F
Sbjct: 135 -NLNRLELSSNTISDISALSGLTSLQQLSFGNQ 166
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 60.7 bits (148), Expect = 5e-10
Identities = 17/127 (13%), Positives = 39/127 (30%), Gaps = 13/127 (10%)
Query: 98 ELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGR 157
I + I L LG +T + +L + + G+
Sbjct: 6 ATITQDTPINQIFT--DTALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKS- 60
Query: 158 LPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLK 214
+ L +L +++ N+L P + + + + ++ + L +L+ L
Sbjct: 61 -IDGVEYLNNLTQINFSNNQLTDITPLKNLT----KLVDILMNNNQIADITPLANLTNLT 115
Query: 215 VADFSYN 221
N
Sbjct: 116 GLTLFNN 122
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 2e-06
Identities = 12/110 (10%), Positives = 27/110 (24%), Gaps = 5/110 (4%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++ + + L LT + +L L+ + + T L P
Sbjct: 357 WLSAGHNQISDL--TPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAP 414
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183
I + + ++ N + + G V
Sbjct: 415 A--TISDGGSYTEPDITWNLPSY-TNEVSYTFSQPVTIGKGTTTFSGTVT 461
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 82.9 bits (205), Expect = 2e-17
Identities = 36/164 (21%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG 421
IG V++G +G E+AV K + + E+ + HEN
Sbjct: 46 LQESIGKGRFGEVWRGKWRGE-EVAV-----KIFSSREERSWFREAEIYQTVMLRHENIL 99
Query: 422 KLLGYC-RESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+ +++ +T++ LV DY +G+L+++L+ R V+ +K+ + A GL +LH
Sbjct: 100 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLH 156
Query: 480 TELG-----PPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
E+ P +L S + + ++ + ++ L L+ S+
Sbjct: 157 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA 200
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 2e-16
Identities = 37/137 (27%), Positives = 52/137 (37%), Gaps = 16/137 (11%)
Query: 349 RFSRQELEVACEDFSNI-----IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLEL 403
R + + E+ I IGS VYKG G ++AV L T
Sbjct: 13 RDAADDWEI---PDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKML--NVTAPTPQQLQ 65
Query: 404 YFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTR 463
F+ EV L + H N +GY +V + +LY HLH E + +
Sbjct: 66 AFKNEVGVLRKTRHVNILLFMGYSTA-PQL--AIVTQWCEGSSLYHHLHASET-KFEMKK 121
Query: 464 RMKIVIGIARGLKYLHT 480
+ I ARG+ YLH
Sbjct: 122 LIDIARQTARGMDYLHA 138
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 78.6 bits (194), Expect = 3e-16
Identities = 33/164 (20%), Positives = 63/164 (38%), Gaps = 16/164 (9%)
Query: 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG 421
+G V++G+ +G +AV K + + E+ + + HEN
Sbjct: 12 LLECVGKGRYGEVWRGSWQGE-NVAV-----KIFSSRDEKSWFRETELYNTVMLRHENIL 65
Query: 422 KLLGYCRES--SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+ S S L+ Y G+LY++L + ++IV+ IA GL +LH
Sbjct: 66 GFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLH 122
Query: 480 TELGPPFTISE-----LNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
E+ L S + + ++ ++ L L+ + S
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQS 166
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 78.5 bits (194), Expect = 3e-16
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 6/106 (5%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
K T + E+ V+ I+ + F +EV + + H N K +G +
Sbjct: 26 AIKVTHRETGEVMVMKELIRF---DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRL 82
Query: 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+ +Y GTL + + Q W++R+ IA G+ YLH
Sbjct: 83 --NFITEYIKGGTLRGIIKSMDS-QYPWSQRVSFAKDIASGMAYLH 125
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 79.8 bits (197), Expect = 5e-16
Identities = 33/182 (18%), Positives = 63/182 (34%), Gaps = 20/182 (10%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+++S + L+ + LQ L L + I L L L L N +
Sbjct: 32 NLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS- 90
Query: 134 IPPEI-GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTA 192
+ L+ L K+ L +G+L +L+EL++ N +Q +
Sbjct: 91 LALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQ-SFKLPEYFSNLT 149
Query: 193 NIHGMYASSANLTGLC-----HLSQLKVA----DFSYNFFVGSIPKCLEYLPSTSFQGNC 243
N+ + SS + + L Q+ + D S N + ++ +F+
Sbjct: 150 NLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP--------MNFIQPGAFKEIR 201
Query: 244 LQ 245
L
Sbjct: 202 LH 203
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 77.4 bits (191), Expect = 3e-15
Identities = 29/159 (18%), Positives = 46/159 (28%), Gaps = 6/159 (3%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150
L + L L N L + L++LDL ++ +L+ L + L
Sbjct: 25 NLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILT 84
Query: 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTA----NIHGMYASSANL-T 205
N + L SL++L L + N+ S L
Sbjct: 85 GNPIQSLALGAFSGLSSLQKLVAVETNLAS-LENFPIGHLKTLKELNVAHNLIQSFKLPE 143
Query: 206 GLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCL 244
+L+ L+ D S N L L L
Sbjct: 144 YFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSL 182
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 74.8 bits (184), Expect = 2e-14
Identities = 23/109 (21%), Positives = 41/109 (37%), Gaps = 4/109 (3%)
Query: 74 KINISGSSLKGFLAPE-LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG 132
++ S+LK L L L + + L L++L + N
Sbjct: 400 HLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQE 459
Query: 133 PIPPEI-GNLTGLVKINLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQ 179
P+I L L ++L L +L +L SL+ L++ N+L+
Sbjct: 460 NFLPDIFTELRNLTFLDLSQCQLE-QLSPTAFNSLSSLQVLNMASNQLK 507
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 70.5 bits (173), Expect = 5e-13
Identities = 32/163 (19%), Positives = 48/163 (29%), Gaps = 32/163 (19%)
Query: 81 SLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-- 138
S KG + T L+ L L N +I + L++L+ LD + L +
Sbjct: 360 SFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQ-MSEFSVF 417
Query: 139 GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMY 198
+L L+ +++ L SLE L + N Q
Sbjct: 418 LSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDI------------ 465
Query: 199 ASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
L L D S LE L T+F
Sbjct: 466 --------FTELRNLTFLDLSQCQ--------LEQLSPTAFNS 492
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 68.2 bits (167), Expect = 3e-12
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 5/107 (4%)
Query: 76 NISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKE-LGLLKRLKILDLGTNQLTGPI 134
+IS + + L+ L+ L + GN+ + L+ L LDL QL +
Sbjct: 427 DISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQ-L 485
Query: 135 PPEI-GNLTGLVKINLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQ 179
P +L+ L +N+ SN L +P L SL+++ L N
Sbjct: 486 SPTAFNSLSSLQVLNMASNQLK-SVPDGIFDRLTSLQKIWLHTNPWD 531
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 1e-08
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 74 KINISGSSLKGFLAPE-LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG 132
+ ++G+S + P+ L L L L L + P L L++L++ +NQL
Sbjct: 449 VLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKS 508
Query: 133 PIPPEI-GNLTGLVKINLQSN 152
+P I LT L KI L +N
Sbjct: 509 -VPDGIFDRLTSLQKIWLHTN 528
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 2e-06
Identities = 31/200 (15%), Positives = 61/200 (30%), Gaps = 20/200 (10%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILH---GNNLIGIIPKELGLLKRLKILDLGTNQL 130
+++S + ++ +L +L + L L N + I RL L L N
Sbjct: 153 HLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFD 212
Query: 131 TGPIPPE-IGNLTGLVKINLQ------SNGLTGRLPAELGNLISLEELHLDRNRLQG--- 180
+ + I L GL L L + L L +L L
Sbjct: 213 SLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLD 272
Query: 181 ---AVPAGSNSGYTANIHGMYASS-ANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ + + ++ + + + L++ + + F K L+ L
Sbjct: 273 DIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRL-- 330
Query: 237 TSFQGNCLQNKDPKQRATTL 256
+F N N + +L
Sbjct: 331 -TFTSNKGGNAFSEVDLPSL 349
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 2e-05
Identities = 28/135 (20%), Positives = 50/135 (37%), Gaps = 15/135 (11%)
Query: 93 LTYLQELILHGNNLIGIIPKE-LGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151
LT + L + + + L++++ Q L L ++ S
Sbjct: 281 LTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPT------LKLKSLKRLTFTS 334
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQG-AVPAGSNSGYTANIHGMYASSANLT----G 206
N +E+ +L SLE L L RN L + S+ G T ++ + S +
Sbjct: 335 NKGGN-AFSEV-DLPSLEFLDLSRNGLSFKGCCSQSDFGTT-SLKYLDLSFNGVITMSSN 391
Query: 207 LCHLSQLKVADFSYN 221
L QL+ DF ++
Sbjct: 392 FLGLEQLEHLDFQHS 406
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 77.9 bits (192), Expect = 7e-16
Identities = 33/164 (20%), Positives = 62/164 (37%), Gaps = 16/164 (9%)
Query: 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG 421
IG V+ G +G ++AV K T + + E+ + HEN
Sbjct: 41 MVKQIGKGRYGEVWMGKWRGE-KVAV-----KVFFTTEEASWFRETEIYQTVLMRHENIL 94
Query: 422 KLLGYCRESSPFTR--MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+ + + L+ DY NG+LY++L + +K+ GL +LH
Sbjct: 95 GFIAADIKGTGSWTQLYLITDYHENGSLYDYLK---STTLDAKSMLKLAYSSVSGLCHLH 151
Query: 480 TELGPPFTISE-----LNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
TE+ L S + + ++ + ++ L L+ +S
Sbjct: 152 TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISD 195
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 77.7 bits (192), Expect = 2e-15
Identities = 36/175 (20%), Positives = 54/175 (30%), Gaps = 44/175 (25%)
Query: 85 FLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNL--- 141
F+ P T+LQE + H +NL +P E +K ++ PP G
Sbjct: 2 FINPRNVSNTFLQEPLRHSSNLT-EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREM 60
Query: 142 ----------TGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYT 191
++ L + GL+ LP + LE L N L +P
Sbjct: 61 AVSRLRDCLDRQAHELELNNLGLS-SLPELPPH---LESLVASCNSLT-ELPE------- 108
Query: 192 ANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQN 246
L L V + + +P LEYL N L+
Sbjct: 109 --------------LPQSLKSLLVDNNNLKAL-SDLPPLLEYL---GVSNNQLEK 145
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 74.3 bits (183), Expect = 2e-14
Identities = 37/192 (19%), Positives = 67/192 (34%), Gaps = 46/192 (23%)
Query: 92 LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP---------------P 136
L +L+ L+ N+L +P+ LK L + + L+ P P
Sbjct: 89 LPPHLESLVASCNSLT-ELPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKLP 147
Query: 137 EIGNLTGLVKINLQSNGLTGRLPAEL-------------------GNLISLEELHLDRNR 177
E+ N + L I++ +N L +LP NL L ++ D N
Sbjct: 148 ELQNSSFLKIIDVDNNSLK-KLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNS 206
Query: 178 LQGAVPAGSNSGYTANIHGMYASSANLT---GLCHLSQLKVADFSYNFFVGSIPKCLEYL 234
L+ +P ++ + A + L L +L L N ++P L
Sbjct: 207 LK-KLPDLP-----LSLESIVAGNNILEELPELQNLPFLTTIYADNNLLK-TLPDLPPSL 259
Query: 235 PSTSFQGNCLQN 246
+ + + N L +
Sbjct: 260 EALNVRDNYLTD 271
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 4e-13
Identities = 39/178 (21%), Positives = 63/178 (35%), Gaps = 32/178 (17%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
PEL ++L+ + + N+L +P L+ + G NQL PE+ NL L I
Sbjct: 147 PELQNSSFLKIIDVDNNSLK-KLPDLPP---SLEFIAAGNNQLE--ELPELQNLPFLTAI 200
Query: 148 NLQSNGLTG------------------RLPAELGNLISLEELHLDRNRLQGAVPAGSNSG 189
+N L EL NL L ++ D N L+ +P
Sbjct: 201 YADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADNNLLK-TLPDLP--- 256
Query: 190 YTANIHGMYASSANLTGL-CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQN 246
++ + LT L L D S N F + + L + N +++
Sbjct: 257 --PSLEALNVRDNYLTDLPELPQSLTFLDVSENIF-SGLSELPPNLYYLNASSNEIRS 311
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 3e-10
Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 12/88 (13%)
Query: 92 LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151
L L L N + + L L+ L++ N+L +P L ++
Sbjct: 295 LPPNLYYLNASSNEIRSLC----DLPPSLEELNVSNNKLIE-LPALPPRLE---RLIASF 346
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQ 179
N L +P N L++LH++ N L+
Sbjct: 347 NHLA-EVPELPQN---LKQLHVEYNPLR 370
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 8e-10
Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 25/105 (23%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150
L L+EL + N LI +P RL+ L N L +P NL L +++
Sbjct: 314 DLPPSLEELNVSNNKLI-ELPALPP---RLERLIASFNHLAE-VPELPQNLKQL---HVE 365
Query: 151 SNGLTGRLPAELGNLI----------------SLEELHLDRNRLQ 179
N L P ++ +L++LH++ N L+
Sbjct: 366 YNPLR-EFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLR 409
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 6e-07
Identities = 18/103 (17%), Positives = 30/103 (29%), Gaps = 21/103 (20%)
Query: 92 LLTYLQELILHGNNLIGIIPKELG----------------LLKRLKILDLGTNQLTGPIP 135
L L++L + N L P L + LK L + TN L P
Sbjct: 355 LPQNLKQLHVEYNPLR-EFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLRE-FP 412
Query: 136 PEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRL 178
++ L + S + LE+ + +
Sbjct: 413 DIPESVEDL---RMNSERVVDPYEFAHETTDKLEDDVFEHHHH 452
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 1e-14
Identities = 28/169 (16%), Positives = 56/169 (33%), Gaps = 33/169 (19%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
++I + + E L + + + + + L +++++L+L Q+ I
Sbjct: 26 VHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEE-I 84
Query: 135 PPEI-GNLTGLVKINLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTA 192
+ K+ + N + LP N+ L L L+RN L ++P G
Sbjct: 85 DTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLS-SLPRGI------ 136
Query: 193 NIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
+ +L S N LE + +FQ
Sbjct: 137 --------------FHNTPKLTTLSMSNNN--------LERIEDDTFQA 163
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 3e-14
Identities = 22/102 (21%), Positives = 39/102 (38%), Gaps = 3/102 (2%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
L L E+ L N L I+ ++RL+ L + N+L + + L +
Sbjct: 242 AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVL 300
Query: 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSG 189
+L N L + LE L+LD N + + ++
Sbjct: 301 DLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLKLSTHHT 340
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 7e-13
Identities = 33/152 (21%), Positives = 62/152 (40%), Gaps = 8/152 (5%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+ S+++ A L ++ L L+ + I ++ L +G N +
Sbjct: 49 IVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRY- 107
Query: 134 IPPEI-GNLTGLVKINLQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAGSNSGYT 191
+PP + N+ L + L+ N L+ LP + N L L + N L+ + + T
Sbjct: 108 LPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLE-RIEDDTFQA-T 164
Query: 192 ANIHGMYASSANLTGL--CHLSQLKVADFSYN 221
++ + SS LT + + L A+ SYN
Sbjct: 165 TSLQNLQLSSNRLTHVDLSLIPSLFHANVSYN 196
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 8e-13
Identities = 19/87 (21%), Positives = 31/87 (35%), Gaps = 5/87 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
+ L+ L + N + + + LK+LDL N L + L + L N
Sbjct: 271 MQRLERLYISNNR-LVALNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHN 328
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQ 179
+ L L +L+ L L N
Sbjct: 329 SIV-TLK--LSTHHTLKNLTLSHNDWD 352
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 1e-10
Identities = 35/159 (22%), Positives = 59/159 (37%), Gaps = 37/159 (23%)
Query: 89 ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148
L + ++EL N+ I ++ + L IL L N LT + N GLV+++
Sbjct: 200 TLAIPIAVEELDASHNS-INVVRG--PVNVELTILKLQHNNLTD--TAWLLNYPGLVEVD 254
Query: 149 LQSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL 207
L N L ++ + LE L++ NRL ++
Sbjct: 255 LSYNELE-KIMYHPFVKMQRLERLYISNNRLV-------------ALNLY---------G 291
Query: 208 CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQN 246
+ LKV D S+N L ++ Q + L+N
Sbjct: 292 QPIPTLKVLDLSHNH--------LLHVERNQPQFDRLEN 322
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 5e-05
Identities = 21/139 (15%), Positives = 43/139 (30%), Gaps = 17/139 (12%)
Query: 110 IPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAE-LGNLISL 168
I L + + E L + +++ + +LPA L + +
Sbjct: 13 IDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQV 71
Query: 169 EELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFF 223
E L+L+ +++ + + + I +Y + L ++ L V N
Sbjct: 72 ELLNLNDLQIE-EIDTYAFAYAH-TIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERND- 128
Query: 224 VGSIPKCLEYLPSTSFQGN 242
L LP F
Sbjct: 129 -------LSSLPRGIFHNT 140
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 75.7 bits (186), Expect = 1e-14
Identities = 28/169 (16%), Positives = 56/169 (33%), Gaps = 33/169 (19%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
++I + + E L + + + + + L +++++L+L Q+ I
Sbjct: 32 VHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEE-I 90
Query: 135 PPEI-GNLTGLVKINLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTA 192
+ K+ + N + LP N+ L L L+RN L ++P G
Sbjct: 91 DTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLS-SLPRGI------ 142
Query: 193 NIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
+ +L S N LE + +FQ
Sbjct: 143 --------------FHNTPKLTTLSMSNNN--------LERIEDDTFQA 169
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 73.8 bits (181), Expect = 4e-14
Identities = 22/102 (21%), Positives = 39/102 (38%), Gaps = 3/102 (2%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
L L E+ L N L I+ ++RL+ L + N+L + + L +
Sbjct: 248 AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVL 306
Query: 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSG 189
+L N L + LE L+LD N + + ++
Sbjct: 307 DLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLKLSTHHT 346
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 73.0 bits (179), Expect = 8e-14
Identities = 36/152 (23%), Positives = 51/152 (33%), Gaps = 24/152 (15%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L L + NNL I L+ L L +N+LT + + L N+ N
Sbjct: 146 TPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH-VDL--SLIPSLFHANVSYN 202
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT---GLCH 209
L+ L I++EEL N + V N + + NLT L +
Sbjct: 203 LLS-----TLAIPIAVEELDASHNSIN-VVRGPVNV----ELTILKLQHNNLTDTAWLLN 252
Query: 210 LSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
L D SYN LE + F
Sbjct: 253 YPGLVEVDLSYNE--------LEKIMYHPFVK 276
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 69.6 bits (170), Expect = 1e-12
Identities = 19/87 (21%), Positives = 31/87 (35%), Gaps = 5/87 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
+ L+ L + N + + + LK+LDL N L + L + L N
Sbjct: 277 MQRLERLYISNNR-LVALNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHN 334
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQ 179
+ L L +L+ L L N
Sbjct: 335 SIV-TLK--LSTHHTLKNLTLSHNDWD 358
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 63.8 bits (155), Expect = 7e-11
Identities = 32/152 (21%), Positives = 53/152 (34%), Gaps = 17/152 (11%)
Query: 89 ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148
+L L+ L + N L L + ++ LD N + + + L +
Sbjct: 187 DLSLIPSLFHANVSYNLL-----STLAIPIAVEELDASHNSINV-VRGPV--NVELTILK 238
Query: 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL- 207
LQ N LT L N L E+ L N L+ + + +Y S+ L L
Sbjct: 239 LQHNNLT-DTAW-LLNYPGLVEVDLSYNELE-KIMYHPFVK-MQRLERLYISNNRLVALN 294
Query: 208 ---CHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ LKV D S+N + + +
Sbjct: 295 LYGQPIPTLKVLDLSHNHLL-HVERNQPQFDR 325
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 45.7 bits (108), Expect = 3e-05
Identities = 18/92 (19%), Positives = 31/92 (33%), Gaps = 5/92 (5%)
Query: 86 LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLV 145
L + L+ L L N+L+ + + RL+ L L N + + L
Sbjct: 293 LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLKL--STHHTLK 348
Query: 146 KINLQSNGLTG-RLPAELGNLISLEELHLDRN 176
+ L N L A N+ D++
Sbjct: 349 NLTLSHNDWDCNSLRALFRNVARPAVDDADQH 380
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 71.5 bits (176), Expect = 1e-14
Identities = 17/132 (12%), Positives = 44/132 (33%), Gaps = 24/132 (18%)
Query: 90 LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149
+ +++L ++ + P + L L+ L + +T P + LT L +++
Sbjct: 62 IEYAHNIKDLTINNIHATNYNP--ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119
Query: 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCH 209
+ + ++ L + + L N ++ L
Sbjct: 120 SHSAHDDSILTKINTLPKVNSIDLSYNGA----------------------ITDIMPLKT 157
Query: 210 LSQLKVADFSYN 221
L +LK + ++
Sbjct: 158 LPELKSLNIQFD 169
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 3e-13
Identities = 27/144 (18%), Positives = 47/144 (32%), Gaps = 26/144 (18%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
+ L + L N+ + + +K L + T P I L+ L ++ +
Sbjct: 43 MNSLTYITLANINVTDL--TGIEYAHNIKDLTINNIHATNYNP--ISGLSNLERLRIMGK 98
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQ 212
+T L L SL L + + + LT + L +
Sbjct: 99 DVTSDKIPNLSGLTSLTLLDISHSAH---------------------DDSILTKINTLPK 137
Query: 213 LKVADFSYNFFVGSIPKCLEYLPS 236
+ D SYN + I L+ LP
Sbjct: 138 VNSIDLSYNGAITDI-MPLKTLPE 160
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 2e-12
Identities = 23/107 (21%), Positives = 43/107 (40%), Gaps = 3/107 (2%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++ I G + P L LT L L + + I ++ L ++ +DL N
Sbjct: 92 RLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITD 151
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
I P + L L +N+Q +G+ + + L +L+ + G
Sbjct: 152 IMP-LKTLPELKSLNIQFDGVHDYRG--IEDFPKLNQLYAFSQTIGG 195
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 73.0 bits (179), Expect = 2e-14
Identities = 35/171 (20%), Positives = 63/171 (36%), Gaps = 13/171 (7%)
Query: 76 NISGSSLKGFLAPELGLL-TYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
N+S ++ +LA L L+ L + + + +++ + L LDL N G
Sbjct: 130 NVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGER 189
Query: 135 PPEI----GNLTGLVKINLQSNGLT---GRLPAELGNLISLEELHLDRNRLQGAVPAGSN 187
L + L++ G+ G A + L+ L L N L+ +
Sbjct: 190 GLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRD-AAGAPS 248
Query: 188 SGYTANIHGMYASSANLTGL--CHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ + ++ + S L + ++L V D SYN P E LP
Sbjct: 249 CDWPSQLNSLNLSFTGLKQVPKGLPAKLSVLDLSYNRL-DRNPSPDE-LPQ 297
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 61.5 bits (149), Expect = 1e-10
Identities = 31/164 (18%), Positives = 54/164 (32%), Gaps = 16/164 (9%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIG-------IIPKELGLLKRLKILDLG 126
++I+ + F ++ + L L L N +G + P + L+ L + + G
Sbjct: 153 VLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAG 212
Query: 127 TNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
+G L ++L N L A L L+L L+ VP G
Sbjct: 213 METPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKG 271
Query: 186 SNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGS 226
+ + + S L L Q+ N F+ S
Sbjct: 272 LPA----KLSVLDLSYNRLDRNPSPDELPQVGNLSLKGNPFLDS 311
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 53.0 bits (127), Expect = 9e-08
Identities = 32/179 (17%), Positives = 53/179 (29%), Gaps = 18/179 (10%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLL--KRLKILDLGTNQLTG 132
I L G L + ++ LQEL L + G P L L IL+L
Sbjct: 78 ARIPSRILFGAL--RVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWAT 135
Query: 133 --PIPPEIGNL--TGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG--AVPAGS 186
E+ GL +++ ++ +L L L N G + +
Sbjct: 136 RDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISAL 195
Query: 187 NSGYTANIHGMYASSANLTGL--------CHLSQLKVADFSYNFFVGSIPKCLEYLPST 237
+ + +A + QL+ D S+N + PS
Sbjct: 196 CPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQ 254
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 44.9 bits (106), Expect = 3e-05
Identities = 24/145 (16%), Positives = 48/145 (33%), Gaps = 14/145 (9%)
Query: 98 ELILHGNNLIGIIPKELGLLKRLKI--LDLGTNQLTGPIPP---EIGNLTGLVKINLQSN 152
E +L + + + ++K L + L + ++ I + ++GL ++ L++
Sbjct: 46 EYLLKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENL 105
Query: 153 GLTGRLPAELGNLI--SLEELHLDRNRLQG--AVPAGSNSGYTANIHGMYASSANLTGL- 207
+TG P L L L+L A A + + + A+
Sbjct: 106 EVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFS 165
Query: 208 ----CHLSQLKVADFSYNFFVGSIP 228
L D S N +G
Sbjct: 166 CEQVRVFPALSTLDLSDNPELGERG 190
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 74.8 bits (184), Expect = 3e-14
Identities = 37/156 (23%), Positives = 57/156 (36%), Gaps = 9/156 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L + L+L N + + L++L++L+LG+ I E NL L ++L S
Sbjct: 23 LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGS 82
Query: 152 NGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL--- 207
+ + L + L L EL L L AV + + S + L
Sbjct: 83 SKIY-FLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLH 141
Query: 208 ---CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
L+ LK DFS N LE L +
Sbjct: 142 PSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLS 177
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 70.2 bits (172), Expect = 7e-13
Identities = 31/165 (18%), Positives = 58/165 (35%), Gaps = 5/165 (3%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
+ ++ L L + + + LK LK+L+L N++ I E L L +NL
Sbjct: 265 RSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINK-IADEAFYGLDNLQVLNLSY 323
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLS 211
N L + L + + L +N + + + + + LT + +
Sbjct: 324 NLLGELYSSNFYGLPKVAYIDLQKNHIA-IIQDQTFKFLE-KLQTLDLRDNALTTIHFIP 381
Query: 212 QLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNKDPKQRATTL 256
+ S N V ++PK N L+N D +
Sbjct: 382 SIPDIFLSGNKLV-TLPKINLTANLIHLSENRLENLDILYFLLRV 425
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 63.3 bits (154), Expect = 1e-10
Identities = 34/159 (21%), Positives = 50/159 (31%), Gaps = 29/159 (18%)
Query: 93 LTYLQELILHGNNLIGIIPKEL-GLLKRLKILDLGTNQLTGPIPPEI-----GNLTGLVK 146
+ +LQ LIL+ N + L+ L LG N L E+ L+ L
Sbjct: 425 VPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQV 484
Query: 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG 206
+ L N L P +L +L L L+ NRL L+
Sbjct: 485 LYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLT-----------------------VLSH 521
Query: 207 LCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQ 245
+ L++ D S N + P L N
Sbjct: 522 NDLPANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFI 560
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 62.1 bits (151), Expect = 2e-10
Identities = 33/181 (18%), Positives = 61/181 (33%), Gaps = 14/181 (7%)
Query: 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131
V +++S + + L L+ L L N + I + L L++L+L N L
Sbjct: 268 VRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLG 327
Query: 132 GPIPPEI-GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGY 190
+ L + I+LQ N + L L+ L L N L + +
Sbjct: 328 E-LYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNAL-------TTIHF 379
Query: 191 TANIHGMYASSANLTGLCHLS-QLKVADFSYNFF----VGSIPKCLEYLPSTSFQGNCLQ 245
+I ++ S L L ++ + S N + + +L N
Sbjct: 380 IPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFS 439
Query: 246 N 246
+
Sbjct: 440 S 440
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 6e-07
Identities = 27/156 (17%), Positives = 50/156 (32%), Gaps = 32/156 (20%)
Query: 89 ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG-PIPPEIGNLTGLVKI 147
+ + + ++ L GN L+ + L ++ L N+L I + + L +
Sbjct: 376 TIHFIPSIPDIFLSGNKLVTLPKINL----TANLIHLSENRLENLDILYFLLRVPHLQIL 431
Query: 148 NLQSNGLTGRLPAE--LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT 205
L N + + SLE+L L N + + +
Sbjct: 432 ILNQNRFS-SCSGDQTPSENPSLEQLFLGEN----------------MLQLAWETELCWD 474
Query: 206 GLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
LS L+V ++N+ L LP F
Sbjct: 475 VFEGLSHLQVLYLNHNY--------LNSLPPGVFSH 502
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 4e-06
Identities = 36/178 (20%), Positives = 60/178 (33%), Gaps = 26/178 (14%)
Query: 74 KINISGSSLKGF-LAPELGLLTYLQELILHGNNLIGIIPKELGLL--KRLKILDLGTNQL 130
++++S + ++ L P G L L+ + N + + EL L K L L N L
Sbjct: 127 RLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSL 186
Query: 131 TGPIPPEIGNLTG------LVKINLQSNGLTGRLPAELGNLIS-LEELHLDRNRLQGAVP 183
+ + G L +++ NG T + N IS + L
Sbjct: 187 YSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAG 246
Query: 184 AGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
G + NI GL S ++ D S+ F + L S F+
Sbjct: 247 FGFH-----NIKDP--DQNTFAGLARSS-VRHLDLSHGF--------VFSLNSRVFET 288
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 2e-05
Identities = 29/140 (20%), Positives = 50/140 (35%), Gaps = 13/140 (9%)
Query: 44 HLVLSNWNALDADPCHWTGIACSD-ARDRVLKI---NISGSSLKGFLAPELGLLTYLQEL 99
L+L+ N + T S+ L + + + L++LQ L
Sbjct: 430 ILILNQ-NRFSSCSGDQT---PSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVL 485
Query: 100 ILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLP 159
L+ N L + P L L+ L L +N+LT + L +++ N L P
Sbjct: 486 YLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTV-LSHND-LPANLEILDISRNQLLAPNP 543
Query: 160 AELGNLISLEELHLDRNRLQ 179
+SL L + N+
Sbjct: 544 ---DVFVSLSVLDITHNKFI 560
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 5e-14
Identities = 37/153 (24%), Positives = 62/153 (40%), Gaps = 13/153 (8%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT-GPIPPEI-GNLTGLVKIN 148
+ LQEL +H N + + L ++ +++LGTN L I + L I
Sbjct: 118 KMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIR 177
Query: 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLC 208
+ +T +P L SL ELHLD N++ V A S G N+ + S +++ +
Sbjct: 178 IADTNIT-TIPQGL--PPSLTELHLDGNKIT-KVDAASLKGLN-NLAKLGLSFNSISAVD 232
Query: 209 -----HLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ L+ + N V +P L
Sbjct: 233 NGSLANTPHLRELHLNNNKLV-KVPGGLADHKY 264
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 2e-12
Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 4/97 (4%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
GL L EL L GN + + L L L L L N ++ + N L +++L
Sbjct: 189 GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA-VDNGSLANTPHLRELHL 247
Query: 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGS 186
+N L ++P L + ++ ++L N + A+ +
Sbjct: 248 NNNKLV-KVPGGLADHKYIQVVYLHNNNIS-AIGSND 282
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 2e-11
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L L LIL N + I P L +L+ L L NQL +P ++ L ++ + N
Sbjct: 75 LKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE-LPEKM--PKTLQELRVHEN 131
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQ 179
+T + L + + L N L+
Sbjct: 132 EITKVRKSVFNGLNQMIVVELGTNPLK 158
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 8e-11
Identities = 19/93 (20%), Positives = 35/93 (37%), Gaps = 7/93 (7%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L L +L L N++ + L L+ L L N+L +P + + + + L +N
Sbjct: 215 LNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVK-VPGGLADHKYIQVVYLHNN 273
Query: 153 GLTG------RLPAELGNLISLEELHLDRNRLQ 179
++ P S + L N +Q
Sbjct: 274 NISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 306
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 1e-10
Identities = 34/147 (23%), Positives = 52/147 (35%), Gaps = 22/147 (14%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
L L L N + I + LK L L L N+++ I P L L ++ L
Sbjct: 49 DLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISK-ISPGAFAPLVKLERLYL 107
Query: 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCH 209
N L LP ++ +L+EL + N + V +G + +
Sbjct: 108 SKNQLK-ELPEKM--PKTLQELRVHENEIT-KVRKSVFNGLN-----------QMIVV-E 151
Query: 210 LS--QLKVADFSYNFFVGSIPKCLEYL 234
L LK + F G K L Y+
Sbjct: 152 LGTNPLKSSGIENGAFQGM--KKLSYI 176
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 8e-10
Identities = 16/93 (17%), Positives = 34/93 (36%), Gaps = 9/93 (9%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG------PIPPEIGNLTGLVK 146
+L+EL L+ N L+ +P L K ++++ L N ++ P
Sbjct: 239 TPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSG 297
Query: 147 INLQSNGLT-GRLPAEL-GNLISLEELHLDRNR 177
++L SN + + + + L +
Sbjct: 298 VSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 73.1 bits (179), Expect = 8e-14
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 10/92 (10%)
Query: 92 LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGL----VKI 147
L T L+ L + N L +P+ L + L+ LD+ TN L +P +
Sbjct: 158 LPTSLEVLSVRNNQL-TFLPE---LPESLEALDVSTNLLES-LPAVPVRNHHSEETEIFF 212
Query: 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
+ N +T +P + +L + L+ N L
Sbjct: 213 RCRENRIT-HIPENILSLDPTCTIILEDNPLS 243
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 64.2 bits (156), Expect = 4e-11
Identities = 29/161 (18%), Positives = 54/161 (33%), Gaps = 17/161 (10%)
Query: 86 LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLV 145
+ N + ++ + L+ + L L L+ +P + +
Sbjct: 29 YFSAWDKWEKQALPGENRNEAVSLLKE--CLINQFSELQLNRLNLSS-LPDNLP--PQIT 83
Query: 146 KINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT 205
+ + N L LP + LE L NRL +P A++ + + LT
Sbjct: 84 VLEITQNALI-SLPELPAS---LEYLDACDNRLS-TLPELP-----ASLKHLDVDNNQLT 133
Query: 206 GLCHL-SQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQ 245
L L + L+ + N +P+ L S + N L
Sbjct: 134 MLPELPALLEYINADNNQLT-MLPELPTSLEVLSVRNNQLT 173
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 63.8 bits (155), Expect = 6e-11
Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 6/91 (6%)
Query: 92 LLTYLQELILHGNNLIGIIPKELGLLKRLK----ILDLGTNQLTGPIPPEIGNLTGLVKI 147
L L+ L + N L + P + N++T IP I +L I
Sbjct: 178 LPESLEALDVSTNLLESL-PAVPVRNHHSEETEIFFRCRENRITH-IPENILSLDPTCTI 235
Query: 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRL 178
L+ N L+ R+ L + + H R
Sbjct: 236 ILEDNPLSSRIRESLSQQTAQPDYHGPRIYF 266
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 46.9 bits (111), Expect = 1e-05
Identities = 12/73 (16%), Positives = 22/73 (30%), Gaps = 3/73 (4%)
Query: 86 LAPELGLLTYLQELILH---GNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLT 142
L + +E + N I IP+ + L + L N L+ I + T
Sbjct: 195 LPAVPVRNHHSEETEIFFRCRENRITHIPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254
Query: 143 GLVKINLQSNGLT 155
+ +
Sbjct: 255 AQPDYHGPRIYFS 267
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 3e-13
Identities = 27/153 (17%), Positives = 43/153 (28%), Gaps = 31/153 (20%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT-GPIPPEI-GNLTGLVKIN 148
G+ + L L N L + L +L L L +N L+ + T L ++
Sbjct: 25 GIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLD 84
Query: 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLC 208
L NG+ + + L LE L + L+
Sbjct: 85 LSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSV--------------------FL 123
Query: 209 HLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
L L D S+ + F G
Sbjct: 124 SLRNLIYLDISHTH--------TRVAFNGIFNG 148
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 6e-11
Identities = 26/151 (17%), Positives = 45/151 (29%), Gaps = 32/151 (21%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L L L + + L L++L + N P+I L L ++L
Sbjct: 125 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 184
Query: 152 NGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHL 210
L +L +L SL+ L++ N ++ L
Sbjct: 185 CQLE-QLSPTAFNSLSSLQVLNMSHNNFF-SLDTFP--------------------YKCL 222
Query: 211 SQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
+ L+V D+S N + Q
Sbjct: 223 NSLQVLDYSLNH--------IMTSKKQELQH 245
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 3e-09
Identities = 23/108 (21%), Positives = 41/108 (37%), Gaps = 4/108 (3%)
Query: 75 INISGSSLKGFLAPE-LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+ ++G+S + P+ L L L L L + P L L++L++ N
Sbjct: 155 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS- 213
Query: 134 IPPEI-GNLTGLVKINLQSNGLTGRLPAELGNLI-SLEELHLDRNRLQ 179
+ L L ++ N + EL + SL L+L +N
Sbjct: 214 LDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 261
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 70.7 bits (173), Expect = 4e-13
Identities = 33/155 (21%), Positives = 48/155 (30%), Gaps = 19/155 (12%)
Query: 92 LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151
L L + + L +P L + L + N LT +P L L +
Sbjct: 38 LNNGNAVLNVGESGL-TTLPDCLP--AHITTLVIPDNNLTS-LPALPPELRTL---EVSG 90
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-CHL 210
N LT LP L+ L L A+P + + ++ LT L
Sbjct: 91 NQLT-SLPVLPPGLLELSIFSNPLTHLP-ALP--------SGLCKLWIFGNQLTSLPVLP 140
Query: 211 SQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQ 245
L+ S N S+P L N L
Sbjct: 141 PGLQELSVSDNQL-ASLPALPSELCKLWAYNNQLT 174
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 69.2 bits (169), Expect = 1e-12
Identities = 38/162 (23%), Positives = 57/162 (35%), Gaps = 22/162 (13%)
Query: 92 LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151
L + LQEL + N L +P L +L + N+LT +P L L +
Sbjct: 179 LPSGLQELSVSDNQLA-SLPTLPSELYKLWAYN---NRLT-SLPALPSGLKEL---IVSG 230
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT----GL 207
N LT LP L+EL + NRL ++P + + + LT L
Sbjct: 231 NRLT-SLPVLPSE---LKELMVSGNRLT-SLPMLPS-----GLLSLSVYRNQLTRLPESL 280
Query: 208 CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNKDP 249
HLS + N + L + S + D
Sbjct: 281 IHLSSETTVNLEGNPLSERTLQALREITSAPGYSGPIIRFDM 322
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 65.7 bits (160), Expect = 2e-11
Identities = 46/198 (23%), Positives = 72/198 (36%), Gaps = 37/198 (18%)
Query: 64 ACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKIL 123
AC + + VL N+ S L P+ L ++ L++ NNL +P L+ L
Sbjct: 36 ACLNNGNAVL--NVGESGLTTL--PD-CLPAHITTLVIPDNNLT-SLPALPP---ELRTL 86
Query: 124 DLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTG----------------RLPAELGNLIS 167
++ NQLT +P L L + L LP
Sbjct: 87 EVSGNQLTS-LPVLPPGLLELSIFSNPLTHLPALPSGLCKLWIFGNQLTSLPVLPPG--- 142
Query: 168 LEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-CHLSQLKVADFSYNFFVGS 226
L+EL + N+L ++PA + + ++A + LT L S L+ S N S
Sbjct: 143 LQELSVSDNQLA-SLPALP-----SELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLA-S 195
Query: 227 IPKCLEYLPSTSFQGNCL 244
+P L N L
Sbjct: 196 LPTLPSELYKLWAYNNRL 213
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 65.3 bits (159), Expect = 2e-11
Identities = 41/188 (21%), Positives = 59/188 (31%), Gaps = 46/188 (24%)
Query: 92 LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG----------------PIP 135
L L+ L + GN L +P L L I L +P
Sbjct: 79 LPPELRTLEVSGNQLT-SLPVLPPGLLELSIFSNPLTHLPALPSGLCKLWIFGNQLTSLP 137
Query: 136 PEIGNLTGLVKINLQSNGLTGRLPAELGNLI-----------------SLEELHLDRNRL 178
L L ++ N L LPA L L+EL + N+L
Sbjct: 138 VLPPGLQEL---SVSDNQLA-SLPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQL 193
Query: 179 QGAVPAGSNSGYTANIHGMYASSANLTGL-CHLSQLKVADFSYNFFVGSIPKCLEYLPST 237
++P + ++ ++A + LT L S LK S N S+P L
Sbjct: 194 A-SLPTLP-----SELYKLWAYNNRLTSLPALPSGLKELIVSGNRL-TSLPVLPSELKEL 246
Query: 238 SFQGNCLQ 245
GN L
Sbjct: 247 MVSGNRLT 254
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 48.0 bits (114), Expect = 6e-06
Identities = 20/101 (19%), Positives = 31/101 (30%), Gaps = 10/101 (9%)
Query: 92 LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151
L + L L ++ N L + P+ L L ++L N L+ + +T S
Sbjct: 259 LPSGLLSLSVYRNQLTRL-PESLIHLSSETTVNLEGNPLSERTLQALREITSA---PGYS 314
Query: 152 NGLT------GRLPAELGNLISLEELHLDRNRLQGAVPAGS 186
+ P E L L R PA
Sbjct: 315 GPIIRFDMAGASAPRETRALHLAAADWLVPAREGEPAPADR 355
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 5e-13
Identities = 37/158 (23%), Positives = 54/158 (34%), Gaps = 18/158 (11%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
G+ Q + LHGN + + + L IL L +N L I L L +++L
Sbjct: 29 GIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLAR-IDAAAFTGLALLEQLDL 87
Query: 150 QSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL- 207
N + L L LHLDR LQ + G G + +Y L L
Sbjct: 88 SDNAQLRSVDPATFHGLGRLHTLHLDRCGLQ-ELGPGLFRGLA-ALQYLYLQDNALQALP 145
Query: 208 ----CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
L L N + +P +F+G
Sbjct: 146 DDTFRDLGNLTHLFLHGNR--------ISSVPERAFRG 175
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 6e-11
Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 5/95 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L L L L L + P L L+ L L N L +P + +L L + L
Sbjct: 104 LGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA-LPDDTFRDLGNLTHLFLHG 162
Query: 152 NGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAG 185
N ++ +P L SL+ L L +NR+ V
Sbjct: 163 NRIS-SVPERAFRGLHSLDRLLLHQNRVA-HVHPH 195
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 9e-10
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L L L LHGN + + + L L L L N++ + P +L L+ + L +
Sbjct: 152 LGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH-VHPHAFRDLGRLMTLYLFA 210
Query: 152 NGLTGRLPAE-LGNLISLEELHLDRN 176
N L+ LP E L L +L+ L L+ N
Sbjct: 211 NNLS-ALPTEALAPLRALQYLRLNDN 235
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 69.0 bits (169), Expect = 6e-13
Identities = 31/158 (19%), Positives = 54/158 (34%), Gaps = 17/158 (10%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
GL ++ L L N + I +L L+ L L +N + I + +L L ++L
Sbjct: 49 GLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINT-IEEDSFSSLGSLEHLDL 107
Query: 150 QSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLC 208
N L+ L + L SL L+L N + S T + T +
Sbjct: 108 SYNYLS-NLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQ 166
Query: 209 -----HLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
L+ L+ + + L+ S +
Sbjct: 167 RKDFAGLTFLEELEIDAS--------DLQSYEPKSLKS 196
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 2e-10
Identities = 23/159 (14%), Positives = 51/159 (32%), Gaps = 18/159 (11%)
Query: 93 LTYLQELILHGNNLIGIIPKEL-GLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQ 150
L+ L L L GN + L L +L+IL +G I + LT L ++ +
Sbjct: 123 LSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEID 182
Query: 151 SNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTA----NIHGMYASSANLT 205
++ L + L ++ ++ L L + + ++ + + + +
Sbjct: 183 ASDLQ-SYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTFHFS 240
Query: 206 --------GLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
L + + + K L +
Sbjct: 241 ELSTGETNSLIKKFTFRNVKITDESLF-QVMKLLNQISG 278
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 4e-09
Identities = 20/101 (19%), Positives = 37/101 (36%), Gaps = 10/101 (9%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI--------GNLTGL 144
+ + LILH I ++ + + ++ L+L L E+
Sbjct: 197 IQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTF 256
Query: 145 VKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG 185
+ + L ++ L + L EL RN+L+ VP G
Sbjct: 257 RNVKITDESLF-QVMKLLNQISGLLELEFSRNQLKS-VPDG 295
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 2e-07
Identities = 16/96 (16%), Positives = 34/96 (35%), Gaps = 11/96 (11%)
Query: 93 LTYLQELILHGNNLIGIIPKEL--------GLLKRLKILDLGTNQLTGPIPPEIGNLTGL 144
+ ++ L L +L EL + + + L + + ++GL
Sbjct: 221 TSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLF-QVMKLLNQISGL 279
Query: 145 VKINLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQ 179
+++ N L +P L SL+++ L N
Sbjct: 280 LELEFSRNQLKS-VPDGIFDRLTSLQKIWLHTNPWD 314
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 6e-05
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 90 LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKIN 148
L + + + +L + K L + L L+ NQL +P I LT L KI
Sbjct: 250 LIKKFTFRNVKITDESLFQV-MKLLNQISGLLELEFSRNQLKS-VPDGIFDRLTSLQKIW 307
Query: 149 LQSN 152
L +N
Sbjct: 308 LHTN 311
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 69.4 bits (170), Expect = 9e-13
Identities = 37/173 (21%), Positives = 70/173 (40%), Gaps = 17/173 (9%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+++ + +K E +L+EL L+ N + + P L L+ L L +N+L I
Sbjct: 37 LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKL-I 95
Query: 135 PPEI-GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
P + L+ L K+++ N + L +L +L+ L + N L + + SG +
Sbjct: 96 PLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV-YISHRAFSGLN-S 153
Query: 194 IHGMYASSANLTGL-----CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
+ + NLT + HL L V + + + SF+
Sbjct: 154 LEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLN--------INAIRDYSFKR 198
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 69.0 bits (169), Expect = 1e-12
Identities = 30/156 (19%), Positives = 52/156 (33%), Gaps = 17/156 (10%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L L L L N+ I L RLK+L++ + P L +++
Sbjct: 175 LHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHC 234
Query: 153 GLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---- 207
LT +P + +L+ L L+L N + + + + L +
Sbjct: 235 NLT-AVPYLAVRHLVYLRFLNLSYNPIS-TIEGSMLHELL-RLQEIQLVGGQLAVVEPYA 291
Query: 208 -CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGN 242
L+ L+V + S N L L + F
Sbjct: 292 FRGLNYLRVLNVSGN--------QLTTLEESVFHSV 319
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 65.9 bits (161), Expect = 1e-11
Identities = 29/158 (18%), Positives = 56/158 (35%), Gaps = 19/158 (12%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
G+ T + L L N + + E L+ L+L N ++ + P NL L + L
Sbjct: 29 GIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSA-VEPGAFNNLFNLRTLGL 87
Query: 150 QSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL- 207
+SN L +P L +L +L + N++ + N+ + +L +
Sbjct: 88 RSNRLK-LIPLGVFTGLSNLTKLDISENKIV-ILLDYMFQDLY-NLKSLEVGDNDLVYIS 144
Query: 208 ----CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
L+ L+ L +P+ +
Sbjct: 145 HRAFSGLNSLEQLTLEKC--------NLTSIPTEALSH 174
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 65.5 bits (160), Expect = 1e-11
Identities = 33/155 (21%), Positives = 56/155 (36%), Gaps = 17/155 (10%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L L+ L + N+L+ I + L L+ L L LT IP E +L GL+ + L+
Sbjct: 127 LYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS-IPTEALSHLHGLIVLRLRH 185
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---- 207
+ L L+ L + + G N+ + + NLT +
Sbjct: 186 LNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYG--LNLTSLSITHCNLTAVPYLA 243
Query: 208 -CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
HL L+ + SYN + + +
Sbjct: 244 VRHLVYLRFLNLSYN--------PISTIEGSMLHE 270
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 61.7 bits (150), Expect = 2e-10
Identities = 23/113 (20%), Positives = 38/113 (33%), Gaps = 5/113 (4%)
Query: 76 NISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP 135
IS + P L L + NL + + L L+ L+L N ++ I
Sbjct: 206 EISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIST-IE 264
Query: 136 PEI-GNLTGLVKINLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGS 186
+ L L +I L L + L L L++ N+L +
Sbjct: 265 GSMLHELLRLQEIQLVGGQLA-VVEPYAFRGLNYLRVLNVSGNQLT-TLEESV 315
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 4e-09
Identities = 38/139 (27%), Positives = 58/139 (41%), Gaps = 12/139 (8%)
Query: 44 HLVLSNWNALDA-DPCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILH 102
L +S+W LD P G+ + ++I+ +L + L YL+ L L
Sbjct: 204 VLEISHWPYLDTMTPNCLYGL-------NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLS 256
Query: 103 GNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQSNGLTGRLPAE 161
N + I L L RL+ + L QL + P L L +N+ N LT L
Sbjct: 257 YNPISTIEGSMLHELLRLQEIQLVGGQLAV-VEPYAFRGLNYLRVLNVSGNQLT-TLEES 314
Query: 162 L-GNLISLEELHLDRNRLQ 179
+ ++ +LE L LD N L
Sbjct: 315 VFHSVGNLETLILDSNPLA 333
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 69.4 bits (170), Expect = 1e-12
Identities = 32/159 (20%), Positives = 57/159 (35%), Gaps = 19/159 (11%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
GL ++ L L N + I +L L++L L ++++ I + +L L ++L
Sbjct: 23 GLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINT-IEGDAFYSLGSLEHLDL 81
Query: 150 QSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-- 206
N L+ L + G L SL+ L+L N Q + S N+ + +
Sbjct: 82 SDNHLS-SLSSSWFGPLSSLKYLNLMGNPYQ-TLGVTSLFPNLTNLQTLRIGNVETFSEI 139
Query: 207 ----LCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
L+ L + L S S +
Sbjct: 140 RRIDFAGLTSLNELEIKALS--------LRNYQSQSLKS 170
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 69.0 bits (169), Expect = 1e-12
Identities = 37/179 (20%), Positives = 61/179 (34%), Gaps = 11/179 (6%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+++I L L+ LL ++ + + + + + LK L+ LDL N +
Sbjct: 290 RLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEE 349
Query: 134 IPPE---IGNLTGLVKINLQSNGLT--GRLPAELGNLISLEELHLDRNRLQGAVPAGSNS 188
G L + L N L + L L +L L + RN +P
Sbjct: 350 YLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQW 408
Query: 189 GYTANIHGMYASSANLTGL--CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQ 245
+ + SS + + C L+V D S N S L L N L+
Sbjct: 409 --PEKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNL-DSFSLFLPRLQELYISRNKLK 464
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 1e-10
Identities = 25/174 (14%), Positives = 48/174 (27%), Gaps = 13/174 (7%)
Query: 75 INISGSSLKGFLAP-ELGLLTYLQELILHGNNLIGIIPKE-LGLLKRLKILDLGTNQLTG 132
+N+ G+ + LT LQ L + I + L L L++ L
Sbjct: 103 LNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRN 162
Query: 133 PIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTA 192
+ ++ + + L + L L S+ L L L
Sbjct: 163 YQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLAR-FQFSPLPVDEV 221
Query: 193 NIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQN 246
+ + + D S+N + + + + L F L
Sbjct: 222 S---------SPMKKLAFRGSVLTDESFNELL-KLLRYILELSEVEFDDCTLNG 265
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 1e-10
Identities = 25/147 (17%), Positives = 50/147 (34%), Gaps = 23/147 (15%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
++ L + L + LL+++K + + +++ +L L ++L N
Sbjct: 285 TVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSEN 344
Query: 153 GLT---GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCH 209
+ + A G SL+ L L +N L+ ++ L
Sbjct: 345 LMVEEYLKNSACKGAWPSLQTLVLSQNHLR-SMQKTGEI------------------LLT 385
Query: 210 LSQLKVADFSYNFFVGSIPKCLEYLPS 236
L L D S N F +P ++
Sbjct: 386 LKNLTSLDISRNTF-HPMPDSCQWPEK 411
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 4e-08
Identities = 22/104 (21%), Positives = 40/104 (38%), Gaps = 9/104 (8%)
Query: 76 NISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP 135
N+S + ++ + + L+ L + NNL L RL+ L + N+L
Sbjct: 416 NLSSTGIRVV---KTCIPQTLEVLDVSNNNLDSFSLF----LPRLQELYISRNKLK--TL 466
Query: 136 PEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
P+ L+ + + N L L SL+++ L N
Sbjct: 467 PDASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWD 510
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 8e-08
Identities = 21/154 (13%), Positives = 49/154 (31%), Gaps = 5/154 (3%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
LT L EL + +L + L ++ + L L ++ + L+ + + L+
Sbjct: 147 LTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDT 206
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQ 212
L + L + R + S + + + S C L+
Sbjct: 207 NLARFQFSPLPVDEVSSPMKKLAFRGSV-LTDESFNELLKLLRYILELSEVEFDDCTLNG 265
Query: 213 LKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQN 246
L + S + + L + + + + +
Sbjct: 266 LGDFNPSES----DVVSELGKVETVTIRRLHIPQ 295
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 8e-08
Identities = 17/163 (10%), Positives = 48/163 (29%), Gaps = 3/163 (1%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++ I SL+ + + L + + L LH + ++ +L ++ L+L L
Sbjct: 152 ELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARF 211
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
+ + + + L+ L L+ + ++ + +G
Sbjct: 212 QFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVE--FDDCTLNGLGDF 269
Query: 194 IHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ L + ++ + + L
Sbjct: 270 NPSESDVVSELGKV-ETVTIRRLHIPQFYLFYDLSTVYSLLEK 311
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 67.4 bits (165), Expect = 1e-12
Identities = 33/137 (24%), Positives = 55/137 (40%), Gaps = 13/137 (9%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
L LT + EL L GN L + + L+ +K LDL + Q+T P + L+ L +
Sbjct: 79 APLKNLTKITELELSGNPLKNVSA--IAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVL 134
Query: 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT-- 205
L N +T + L L +L+ L + ++ P + S + + A ++
Sbjct: 135 YLDLNQIT-NISP-LAGLTNLQYLSIGNAQVSDLTPLANLS----KLTTLKADDNKISDI 188
Query: 206 -GLCHLSQLKVADFSYN 221
L L L N
Sbjct: 189 SPLASLPNLIEVHLKNN 205
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 63.6 bits (155), Expect = 3e-11
Identities = 33/153 (21%), Positives = 59/153 (38%), Gaps = 15/153 (9%)
Query: 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131
+KI S++ L + L G + I + + L L L+L NQ+T
Sbjct: 21 AIKIAAGKSNVTDT--VTQADLDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKDNQIT 76
Query: 132 GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYT 191
+ P + NLT + ++ L N L + + L S++ L L ++ P S
Sbjct: 77 D-LAP-LKNLTKITELELSGNPLKN--VSAIAGLQSIKTLDLTSTQITDVTPLAGLS--- 129
Query: 192 ANIHGMYASS---ANLTGLCHLSQLKVADFSYN 221
N+ +Y N++ L L+ L+
Sbjct: 130 -NLQVLYLDLNQITNISPLAGLTNLQYLSIGNA 161
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 59.3 bits (144), Expect = 6e-10
Identities = 24/129 (18%), Positives = 43/129 (33%), Gaps = 29/129 (22%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L ++ +N+ + L + L +T I + L L+ + L+ N
Sbjct: 18 LANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVTT-IEG-VQYLNNLIGLELKDN 73
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQ 212
+T L L NL + EL L N L+ N++ + L
Sbjct: 74 QIT-DLA-PLKNLTKITELELSGNPLK-----------------------NVSAIAGLQS 108
Query: 213 LKVADFSYN 221
+K D +
Sbjct: 109 IKTLDLTST 117
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 4e-04
Identities = 19/89 (21%), Positives = 29/89 (32%), Gaps = 4/89 (4%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
L L L E+ L N + + P L L I+ L +T NL +
Sbjct: 189 SPLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQPVFYNNNLVVPNVV 246
Query: 148 NLQSNGLTGRLPAELGNLISLEELHLDRN 176
S PA + + + +L N
Sbjct: 247 KGPSGAPI--APATISDNGTYASPNLTWN 273
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 69.0 bits (168), Expect = 2e-12
Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 17/162 (10%)
Query: 90 LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149
L L L L L N + + L LK+LK L L N ++ I + +L L + L
Sbjct: 83 LTNLKNLGWLFLDENKIKDLSS--LKDLKKLKSLSLEHNGISD-ING-LVHLPQLESLYL 138
Query: 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASS---ANLTG 206
+N +T L L L+ L L+ N++ VP + + +Y S ++L
Sbjct: 139 GNNKITDITV--LSRLTKLDTLSLEDNQISDIVPLAGLT----KLQNLYLSKNHISDLRA 192
Query: 207 LCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNKD 248
L L L V + + L N ++N D
Sbjct: 193 LAGLKNLDVLELFSQECLNKPINHQSNLVVP----NTVKNTD 230
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 66.3 bits (161), Expect = 9e-12
Identities = 32/150 (21%), Positives = 58/150 (38%), Gaps = 31/150 (20%)
Query: 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131
+K N+ S+ L + ++I + +++ + + + L + L L N+LT
Sbjct: 23 TIKDNLKKKSVTDA--VTQNELNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLT 78
Query: 132 GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYT 191
I P + NL L + L N + L + L +L L+ L L+ N +
Sbjct: 79 D-IKP-LTNLKNLGWLFLDENKIK-DLSS-LKDLKKLKSLSLEHNGIS------------ 122
Query: 192 ANIHGMYASSANLTGLCHLSQLKVADFSYN 221
++ GL HL QL+ N
Sbjct: 123 -----------DINGLVHLPQLESLYLGNN 141
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 60.1 bits (145), Expect = 8e-10
Identities = 17/126 (13%), Positives = 37/126 (29%), Gaps = 29/126 (23%)
Query: 96 LQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLT 155
+ E I + I P +L +T + L + +I ++ +
Sbjct: 1 MGETITVSTPIKQIFP--DDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK 56
Query: 156 GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKV 215
+ + L ++ +L L+ N+L ++ L +L L
Sbjct: 57 -SVQG-IQYLPNVTKLFLNGNKLT-----------------------DIKPLTNLKNLGW 91
Query: 216 ADFSYN 221
N
Sbjct: 92 LFLDEN 97
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 40.9 bits (95), Expect = 9e-04
Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 4/89 (4%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
L LT LQ L L N++ + + L LK L +L+L + + NL +
Sbjct: 169 VPLAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTV 226
Query: 148 NLQSNGLTGRLPAELGNLISLEELHLDRN 176
+ P + + E+ ++ +
Sbjct: 227 KNTDG--SLVTPEIISDDGDYEKPNVKWH 253
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 66.7 bits (163), Expect = 2e-12
Identities = 28/95 (29%), Positives = 36/95 (37%), Gaps = 4/95 (4%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150
L L L N L L RL L+L +LT G L L ++L
Sbjct: 28 DLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT--KLQVDGTLPVLGTLDLS 85
Query: 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG 185
N L LP L +L L + NRL ++P G
Sbjct: 86 HNQLQ-SLPLLGQTLPALTVLDVSFNRLT-SLPLG 118
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 63.2 bits (154), Expect = 4e-11
Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L L L + N L + L L L+ L L N+L +PP + L K++L +
Sbjct: 99 LPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKT-LPPGLLTPTPKLEKLSLAN 157
Query: 152 NGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N LT LPA L L +L+ L L N L +P G
Sbjct: 158 NNLT-ELPAGLLNGLENLDTLLLQENSLY-TIPKG 190
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 3e-10
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
T L +L L L + + G L L LDL NQL +P L L +++ N
Sbjct: 54 YTRLTQLNLDRAELTKL--QVDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFN 110
Query: 153 GLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
LT LP L L+EL+L N L+ +P G
Sbjct: 111 RLT-SLPLGALRGLGELQELYLKGNELK-TLPPG 142
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 3e-10
Identities = 33/100 (33%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVK 146
G L L L L N L +P L L +LD+ N+LT +P L L +
Sbjct: 71 QVDGTLPVLGTLDLSHNQL-QSLPLLGQTLPALTVLDVSFNRLTS-LPLGALRGLGELQE 128
Query: 147 INLQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
+ L+ N L LP L LE+L L N L +PAG
Sbjct: 129 LYLKGNELK-TLPPGLLTPTPKLEKLSLANNNLT-ELPAG 166
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 2e-09
Identities = 28/85 (32%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L LQEL L GN L + P L +L+ L L N LT +P + L L + LQ
Sbjct: 123 LGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTE-LPAGLLNGLENLDTLLLQE 181
Query: 152 NGLTGRLPAELGNLISLEELHLDRN 176
N L +P L L N
Sbjct: 182 NSLY-TIPKGFFGSHLLPFAFLHGN 205
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 68.4 bits (167), Expect = 2e-12
Identities = 29/170 (17%), Positives = 55/170 (32%), Gaps = 15/170 (8%)
Query: 76 NISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP 135
N + S + ++ L N L + + G L L+ L L NQL +
Sbjct: 306 NFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKE-LS 364
Query: 136 PEIG---NLTGLVKINLQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAGSNSGYT 191
+ L ++++ N ++ SL L++ N L +
Sbjct: 365 KIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIF----RCLP 420
Query: 192 ANIHGMYASSANLT----GLCHLSQLKVADFSYNFFVGSIPKC-LEYLPS 236
I + S + + L L+ + + N S+P + L S
Sbjct: 421 PRIKVLDLHSNKIKSIPKQVVKLEALQELNVASNQL-KSVPDGIFDRLTS 469
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 62.6 bits (152), Expect = 1e-10
Identities = 33/161 (20%), Positives = 56/161 (34%), Gaps = 28/161 (17%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L+ L+ LI+ N + + + L+ LDL N+L I L ++L N
Sbjct: 44 LSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVK-IS--CHPTVNLKHLDLSFN 100
Query: 153 GLTGRLP--AELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHL 210
LP E GN+ L+ L L L+ +++ + HL
Sbjct: 101 AFD-ALPICKEFGNMSQLKFLGLSTTHLE---------------------KSSVLPIAHL 138
Query: 211 SQLKVADFSYNFFVGSI-PKCLEYLPSTSFQGNCLQNKDPK 250
+ KV + P+ L+ + S NK+
Sbjct: 139 NISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFH 179
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 55.3 bits (133), Expect = 2e-08
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L L + N L I + L R+K+LDL +N++ IP ++ L L ++N+ SN
Sbjct: 398 TKSLLSLNMSSNILTDTIFR--CLPPRIKVLDLHSNKIKS-IPKQVVKLEALQELNVASN 454
Query: 153 GLTGRLPAE-LGNLISLEELHLDRNRLQ 179
L +P L SL+++ L N
Sbjct: 455 QLK-SVPDGIFDRLTSLQKIWLHTNPWD 481
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 51.4 bits (123), Expect = 5e-07
Identities = 24/148 (16%), Positives = 50/148 (33%), Gaps = 12/148 (8%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L L + + + + I + + ++ + ++ +N
Sbjct: 275 LKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNN 334
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGM---YASSANLT---- 205
LT + G+L LE L L N+L+ + + T + + S +++
Sbjct: 335 LLTDTVFENCGHLTELETLILQMNQLK-ELS--KIAEMTTQMKSLQQLDISQNSVSYDEK 391
Query: 206 -GLC-HLSQLKVADFSYNFFVGSIPKCL 231
G C L + S N +I +CL
Sbjct: 392 KGDCSWTKSLLSLNMSSNILTDTIFRCL 419
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 49.5 bits (118), Expect = 2e-06
Identities = 31/158 (19%), Positives = 52/158 (32%), Gaps = 41/158 (25%)
Query: 101 LHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPA 160
N LI + PK L ++ IL++ N ++ +I +L+ L + + N + L
Sbjct: 7 RSKNGLIHV-PK--DLSQKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQ-YLDI 62
Query: 161 E-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFS 219
LE L L N+L + LK D S
Sbjct: 63 SVFKFNQELEYLDLSHNKLV-KISCH-----------------------PTVNLKHLDLS 98
Query: 220 YNFFVGSIPKC--------LEYLPSTSFQGNCLQNKDP 249
+N F ++P C L++L L+
Sbjct: 99 FNAF-DALPICKEFGNMSQLKFL---GLSTTHLEKSSV 132
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 41.0 bits (96), Expect = 9e-04
Identities = 19/134 (14%), Positives = 33/134 (24%), Gaps = 9/134 (6%)
Query: 95 YLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGL 154
+ + L G LK L I + ++ P + + N +G
Sbjct: 253 SISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGT 312
Query: 155 TGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL------- 207
+ L N L + T + + L L
Sbjct: 313 RMVHMLCPSKISPFLHLDFSNNLLT-DTVFENCGHLT-ELETLILQMNQLKELSKIAEMT 370
Query: 208 CHLSQLKVADFSYN 221
+ L+ D S N
Sbjct: 371 TQMKSLQQLDISQN 384
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 3e-12
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
L L EL L N + I ++L +L L LG NQ+ I L L +++L
Sbjct: 190 DLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRM-IENGSLSFLPTLRELHL 248
Query: 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGS 186
+N L+ R+PA L +L L+ ++L N + V
Sbjct: 249 DNNKLS-RVPAGLPDLKLLQVVYLHTNNIT-KVGVND 283
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 5e-12
Identities = 32/152 (21%), Positives = 58/152 (38%), Gaps = 12/152 (7%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT-GPIPPEIGNLTGLVKINL 149
L + L EL +H N + + L+ + +++G N L P + L + +
Sbjct: 120 NLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRI 179
Query: 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-- 207
LT +P +L +L ELHLD N++Q A+ Y+ ++ + + +
Sbjct: 180 SEAKLT-GIPKDL--PETLNELHLDHNKIQ-AIELEDLLRYS-KLYRLGLGHNQIRMIEN 234
Query: 208 ---CHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
L L+ N +P L L
Sbjct: 235 GSLSFLPTLRELHLDNNKLS-RVPAGLPDLKL 265
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 1e-11
Identities = 31/153 (20%), Positives = 60/153 (39%), Gaps = 18/153 (11%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L +L L+L N + I K L++L+ L + N L IPP + + LV++ + N
Sbjct: 77 LQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVE-IPPNL--PSSLVELRIHDN 133
Query: 153 GLTGRLPAE-LGNLISLEELHLDRNRLQ-GAVPAGSNSGYTANIHGMYASSANLTGLCH- 209
+ ++P L ++ + + N L+ G+ G ++ + S A LTG+
Sbjct: 134 RIR-KVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDG--LKLNYLRISEAKLTGIPKD 190
Query: 210 -LSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
L +N ++ +
Sbjct: 191 LPETLNELHLDHN--------KIQAIELEDLLR 215
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 1e-10
Identities = 32/138 (23%), Positives = 53/138 (38%), Gaps = 20/138 (14%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
+ L L N++ + + L+ L L L N+++ I + L L K+ +
Sbjct: 51 EISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISK-IHEKAFSPLRKLQKLYI 109
Query: 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCH 209
N L +P L SL EL + NR++ VP G SG N+ +
Sbjct: 110 SKNHLV-EIPPNL--PSSLVELRIHDNRIR-KVPKGVFSGLR-----------NMNCI-E 153
Query: 210 LS--QLKVADFSYNFFVG 225
+ L+ + F F G
Sbjct: 154 MGGNPLENSGFEPGAFDG 171
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 1e-10
Identities = 20/94 (21%), Positives = 35/94 (37%), Gaps = 9/94 (9%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
+ L L L N + I L L L+ L L N+L+ +P + +L L + L +N
Sbjct: 216 YSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSR-VPAGLPDLKLLQVVYLHTN 274
Query: 153 GLTGRLPAE-------LGNLISLEELHLDRNRLQ 179
+T ++ + L N +
Sbjct: 275 NIT-KVGVNDFCPVGFGVKRAYYNGISLFNNPVP 307
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 3e-07
Identities = 21/94 (22%), Positives = 34/94 (36%), Gaps = 11/94 (11%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-------GNLTGLV 145
L L+EL L N L +P L LK L+++ L TN +T +
Sbjct: 240 LPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITK-VGVNDFCPVGFGVKRAYYN 297
Query: 146 KINLQSNGLTGRL--PAELGNLISLEELHLDRNR 177
I+L +N + PA + + +
Sbjct: 298 GISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 66.7 bits (163), Expect = 5e-12
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 18/155 (11%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L +L+ L L N++ I L L L+L N LT IP L+ L ++ L++
Sbjct: 98 LHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTV-IPSGAFEYLSKLRELWLRN 156
Query: 152 NGLTGRLPAE-LGNLISLEELHLDR-NRLQGAVPAGSNSGYTANIHGMYASSANLTGLC- 208
N + +P+ + SL L L +L+ + G+ G N+ + N+ +
Sbjct: 157 NPIE-SIPSYAFNRVPSLMRLDLGELKKLE-YISEGAFEGLF-NLKYLNLGMCNIKDMPN 213
Query: 209 --HLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
L L+ + S N + SF G
Sbjct: 214 LTPLVGLEELEMSGNH--------FPEIRPGSFHG 240
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 64.0 bits (156), Expect = 4e-11
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
G+ + + L L NN+ I L L++L LG N + I L L + L
Sbjct: 72 GIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQ-IEVGAFNGLASLNTLEL 130
Query: 150 QSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGS 186
N LT +P+ L L EL L N ++ ++P+ +
Sbjct: 131 FDNWLT-VIPSGAFEYLSKLRELWLRNNPIE-SIPSYA 166
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 62.5 bits (152), Expect = 1e-10
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 5/94 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPE-IGNLTGLVKINLQS 151
L L+ L L N+ + L L L+ L++ N I P L+ L K+ + +
Sbjct: 195 LFNLKYLNLGMCNIKDM--PNLTPLVGLEELEMSGNHFPE-IRPGSFHGLSSLKKLWVMN 251
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG 185
+ ++ L SL EL+L N L ++P
Sbjct: 252 SQVSLIERNAFDGLASLVELNLAHNNLS-SLPHD 284
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 62.1 bits (151), Expect = 2e-10
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPE-IGNLTGLVK 146
P L L L+EL + GN+ I P L LK L + +Q++ I L LV+
Sbjct: 212 PNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSL-IERNAFDGLASLVE 270
Query: 147 INLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQ 179
+NL N L+ LP + L L ELHL N
Sbjct: 271 LNLAHNNLS-SLPHDLFTPLRYLVELHLHHNPWN 303
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 3e-04
Identities = 21/123 (17%), Positives = 39/123 (31%), Gaps = 32/123 (26%)
Query: 119 RLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRL 178
+ + L+ +P I + +NL N + +L LE L L RN +
Sbjct: 55 QFSKVVCTRRGLSE-VPQGI--PSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSI 111
Query: 179 QGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTS 238
+ + G+ L+ L + N+ L +PS +
Sbjct: 112 R-QIEVGA--------------------FNGLASLNTLELFDNW--------LTVIPSGA 142
Query: 239 FQG 241
F+
Sbjct: 143 FEY 145
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 66.0 bits (161), Expect = 6e-12
Identities = 34/156 (21%), Positives = 60/156 (38%), Gaps = 22/156 (14%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
LT L L+L N+L I + + L+ LDL +N L + + +L L + L +
Sbjct: 63 LTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHT-LDEFLFSDLQALEVLLLYN 121
Query: 152 NGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHL 210
N + + ++ L++L+L +N++ P + L
Sbjct: 122 NHIV-VVDRNAFEDMAQLQKLYLSQNQIS-RFPVEL-----------------IKDGNKL 162
Query: 211 SQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQN 246
+L + D S N L+ LP+ G L N
Sbjct: 163 PKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHN 198
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 54.5 bits (131), Expect = 4e-08
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI----GNLTGLVKIN 148
L L+ L+L+ N+++ + + +L+ L L NQ++ P E+ L L+ ++
Sbjct: 111 LQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR-FPVELIKDGNKLPKLMLLD 169
Query: 149 LQSNGLTGRLPAELGNLISL--EELHLDRNRLQ 179
L SN L +L L + L+L N L+
Sbjct: 170 LSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 48.7 bits (116), Expect = 3e-06
Identities = 26/140 (18%), Positives = 48/140 (34%), Gaps = 22/140 (15%)
Query: 110 IPKELGLLKRLKILDLGTNQLTGPIPPEI--GNLTGLVKINLQSNGLTGRLPAE-LGNLI 166
+P+ L +LDL N L+ + E LT L + L N L + +E +
Sbjct: 33 VPQ--SLPSYTALLDLSHNNLSR-LRAEWTPTRLTNLHSLLLSHNHLN-FISSEAFVPVP 88
Query: 167 SLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYN 221
+L L L N L + S + + + ++ + ++QL+ S N
Sbjct: 89 NLRYLDLSSNHLH-TLDEFLFSDLQ-ALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQN 146
Query: 222 FFVGSIPKCLEYLPSTSFQG 241
+ P +
Sbjct: 147 Q--------ISRFPVELIKD 158
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 66.3 bits (162), Expect = 7e-12
Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 18/155 (11%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L +L+ L L N++ I L L L+L N+LT IP L+ L ++ L++
Sbjct: 87 LRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTT-IPNGAFVYLSKLKELWLRN 145
Query: 152 NGLTGRLPAEL-GNLISLEELHLDR-NRLQGAVPAGSNSGYTANIHGMYASSANLTGLC- 208
N + +P+ + SL L L RL + G+ G + N+ + + NL +
Sbjct: 146 NPIE-SIPSYAFNRIPSLRRLDLGELKRLS-YISEGAFEGLS-NLRYLNLAMCNLREIPN 202
Query: 209 --HLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
L +L D S N L + SFQG
Sbjct: 203 LTPLIKLDELDLSGN--------HLSAIRPGSFQG 229
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 62.5 bits (152), Expect = 1e-10
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
G+ T + L LH N + I L+ L+IL L N + I L L + L
Sbjct: 61 GISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRT-IEIGAFNGLANLNTLEL 119
Query: 150 QSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGS 186
N LT +P L L+EL L N ++ ++P+ +
Sbjct: 120 FDNRLT-TIPNGAFVYLSKLKELWLRNNPIE-SIPSYA 155
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 3e-10
Identities = 35/94 (37%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPE-IGNLTGLVK 146
P L L L EL L GN+L I P L L+ L + +Q+ I NL LV+
Sbjct: 201 PNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQV-IERNAFDNLQSLVE 259
Query: 147 INLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQ 179
INL N LT LP + L LE +HL N
Sbjct: 260 INLAHNNLT-LLPHDLFTPLHHLERIHLHHNPWN 292
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 1e-06
Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 6/92 (6%)
Query: 96 LQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQSNGL 154
++I NL + P G+ ++L+L NQ+ I +L L + L N +
Sbjct: 45 FSKVICVRKNLREV-PD--GISTNTRLLNLHENQIQI-IKVNSFKHLRHLEILQLSRNHI 100
Query: 155 TGRLPAELGNLISLEELHLDRNRLQGAVPAGS 186
L +L L L NRL +P G+
Sbjct: 101 RTIEIGAFNGLANLNTLELFDNRLT-TIPNGA 131
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 65.9 bits (161), Expect = 1e-11
Identities = 33/151 (21%), Positives = 57/151 (37%), Gaps = 19/151 (12%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++ SS+ + LT L +LI NN+ + +L L L +N+LT
Sbjct: 46 SLDCHNSSITDM--TGIEKLTGLTKLICTSNNITTL---DLSQNTNLTYLACDSNKLTN- 99
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
+ + LT L +N +N LT ++ L L+ RN L + N+
Sbjct: 100 LD--VTPLTKLTYLNCDTNKLT---KLDVSQNPLLTYLNCARNTLT-EIDVSHNT----Q 149
Query: 194 IHGMYASSANLT---GLCHLSQLKVADFSYN 221
+ + + +QL D S+N
Sbjct: 150 LTELDCHLNKKITKLDVTPQTQLTTLDCSFN 180
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 2e-11
Identities = 24/136 (17%), Positives = 46/136 (33%), Gaps = 16/136 (11%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
++ T L L N + + ++ K L L+ TN +T ++ L +
Sbjct: 164 LDVTPQTQLTTLDCSFNKITEL---DVSQNKLLNRLNCDTNNITK---LDLNQNIQLTFL 217
Query: 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL 207
+ SN LT ++ L L N L + + S + ++ +L +
Sbjct: 218 DCSSNKLTE---IDVTPLTQLTYFDCSVNPLT-ELDVSTLS----KLTTLHCIQTDLLEI 269
Query: 208 --CHLSQLKVADFSYN 221
H +QL
Sbjct: 270 DLTHNTQLIYFQAEGC 285
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 5e-11
Identities = 30/135 (22%), Positives = 49/135 (36%), Gaps = 15/135 (11%)
Query: 89 ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148
++ T L EL H N I + + +L LD N++T + + L ++N
Sbjct: 143 DVSHNTQLTELDCHLNKKITKLD--VTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLN 197
Query: 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL- 207
+N +T +L L I L L N+L + + + S LT L
Sbjct: 198 CDTNNIT-KLD--LNQNIQLTFLDCSSNKLT-EIDVTPLT----QLTYFDCSVNPLTELD 249
Query: 208 -CHLSQLKVADFSYN 221
LS+L
Sbjct: 250 VSTLSKLTTLHCIQT 264
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 2e-10
Identities = 30/131 (22%), Positives = 49/131 (37%), Gaps = 15/131 (11%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L L L H +++ + + L L L +N +T ++ T L + SN
Sbjct: 41 LATLTSLDCHNSSITDM--TGIEKLTGLTKLICTSNNITT---LDLSQNTNLTYLACDSN 95
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL--CHL 210
LT L + L L L+ D N+L + N + + + LT + H
Sbjct: 96 KLT-NLD--VTPLTKLTYLNCDTNKLT-KLDVSQNP----LLTYLNCARNTLTEIDVSHN 147
Query: 211 SQLKVADFSYN 221
+QL D N
Sbjct: 148 TQLTELDCHLN 158
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 9e-09
Identities = 26/128 (20%), Positives = 41/128 (32%), Gaps = 12/128 (9%)
Query: 96 LQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLT 155
+ + L L LD + +T I LTGL K+ SN +T
Sbjct: 20 FASEVAAAFEMQATDTISEEQLATLTSLDCHNSSITD--MTGIEKLTGLTKLICTSNNIT 77
Query: 156 GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL--CHLSQL 213
L L +L L D N+L + + + + + LT L L
Sbjct: 78 T-LD--LSQNTNLTYLACDSNKLT-NLDVTPLT----KLTYLNCDTNKLTKLDVSQNPLL 129
Query: 214 KVADFSYN 221
+ + N
Sbjct: 130 TYLNCARN 137
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 1e-08
Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 8/91 (8%)
Query: 89 ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148
+L T L G I + ++ +L +LD +T + + LV +
Sbjct: 270 DLTHNTQLIYFQAEGCRKIKEL--DVTHNTQLYLLDCQAAGIT-ELD--LSQNPKLVYLY 324
Query: 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
L + LT L + + L+ L +Q
Sbjct: 325 LNNTELT-ELD--VSHNTKLKSLSCVNAHIQ 352
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 9e-08
Identities = 28/198 (14%), Positives = 58/198 (29%), Gaps = 44/198 (22%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG- 132
++ S + L ++ LT L N L + ++ L +L L L
Sbjct: 216 FLDCSSNKLTEI---DVTPLTQLTYFDCSVNPLTEL---DVSTLSKLTTLHCIQTDLLEI 269
Query: 133 PI------------------PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLD 174
+ ++ + T L ++ Q+ G+T L L L L+L+
Sbjct: 270 DLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGIT-ELD--LSQNPKLVYLYLN 326
Query: 175 RNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGSIPKCL 231
L + N+ + + +A++ + L +
Sbjct: 327 NTELT-ELDVSHNT----KLKSLSCVNAHIQDFSSVGKIPALNNNFEAEGQ--------T 373
Query: 232 EYLPSTSFQGNCLQNKDP 249
+P + N L
Sbjct: 374 ITMPKETLTNNSLTIAVS 391
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 65.5 bits (160), Expect = 1e-11
Identities = 28/135 (20%), Positives = 44/135 (32%), Gaps = 14/135 (10%)
Query: 55 ADPCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKEL 114
ADP CS L PEL ++ + L N++ +
Sbjct: 1 ADPGTSE---CSVIGYNA---ICINRGLHQV--PEL--PAHVNYVDLSLNSIAELNETSF 50
Query: 115 GLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQSNGLTGRLPAE-LGNLISLEELH 172
L+ L+ L + I L+ L+ + L N +L L +LE L
Sbjct: 51 SRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFL-QLETGAFNGLANLEVLT 109
Query: 173 LDRNRLQGA-VPAGS 186
L + L GA +
Sbjct: 110 LTQCNLDGAVLSGNF 124
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 6e-10
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
T L++L L N + I L L L+L N L I + NL L ++L
Sbjct: 298 FTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGS-IDSRMFENLDKLEVLDLSY 356
Query: 152 NGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N + L + L +L+EL LD N+L+ +VP G
Sbjct: 357 NHIR-ALGDQSFLGLPNLKELALDTNQLK-SVPDG 389
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 58.6 bits (142), Expect = 2e-09
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Query: 94 TYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQSN 152
+ ++ L + + ++ L+ L L N++ I LT L+K+NL N
Sbjct: 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEIN-KIDDNAFWGLTHLLKLNLSQN 333
Query: 153 GLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAGS 186
L + + + NL LE L L N ++ A+ S
Sbjct: 334 FLG-SIDSRMFENLDKLEVLDLSYNHIR-ALGDQS 366
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 2e-08
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
LT+L +L L N L I + L +L++LDL N + + + L L ++ L +
Sbjct: 322 LTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRA-LGDQSFLGLPNLKELALDT 380
Query: 152 NGLTGRLPAE-LGNLISLEELHLDRNRLQ 179
N L +P L SL+++ L N
Sbjct: 381 NQLK-SVPDGIFDRLTSLQKIWLHTNPWD 408
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 4e-04
Identities = 21/169 (12%), Positives = 49/169 (28%), Gaps = 30/169 (17%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI----- 147
L+ + ++ L + LDL N + + KI
Sbjct: 187 LSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLIL 246
Query: 148 NLQSNGLTGRLPAELGNL----------ISLEELHLDRNRLQGAVPAGSNSGYTANIHGM 197
+ N + + ++ L ++++ A+ S +T ++ +
Sbjct: 247 SNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIF-ALLKSVFSHFT-DLEQL 304
Query: 198 YASSANLTGL-----CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
+ + + L+ L + S NF L + S F+
Sbjct: 305 TLAQNEINKIDDNAFWGLTHLLKLNLSQNF--------LGSIDSRMFEN 345
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 65.2 bits (158), Expect = 2e-11
Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 6/94 (6%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
L L + L L N L + P L L+ L++L N L + NL L ++
Sbjct: 457 CHLEQLLLVTHLDLSHNRLRAL-PPALAALRCLEVLQASDNALE--NVDGVANLPRLQEL 513
Query: 148 NLQSNGLTGRLPA--ELGNLISLEELHLDRNRLQ 179
L +N L A L + L L+L N L
Sbjct: 514 LLCNNRLQQ-SAAIQPLVSCPRLVLLNLQGNSLC 546
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 53.6 bits (128), Expect = 1e-07
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 5/96 (5%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG- 132
+++S + L+ L P L L L+ L N L + + L RL+ L L N+L
Sbjct: 467 HLDLSHNRLRA-LPPALAALRCLEVLQASDNALENV--DGVANLPRLQELLLCNNRLQQS 523
Query: 133 PIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISL 168
+ + LV +NLQ N L + L +
Sbjct: 524 AAIQPLVSCPRLVLLNLQGNSLC-QEEGIQERLAEM 558
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 5e-11
Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 13/135 (9%)
Query: 90 LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149
+ L + +L L+GN L I P L LK L L L N++ + + +L L ++L
Sbjct: 64 IQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LSS-LKDLKKLKSLSL 119
Query: 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASS---ANLTG 206
+ NG++ + L +L LE L+L N++ + + + +++
Sbjct: 120 EHNGIS-DING-LVHLPQLESLYLGNNKITDITVLSRLT----KLDTLSLEDNQISDIVP 173
Query: 207 LCHLSQLKVADFSYN 221
L L++L+ S N
Sbjct: 174 LAGLTKLQNLYLSKN 188
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 8e-10
Identities = 32/150 (21%), Positives = 58/150 (38%), Gaps = 31/150 (20%)
Query: 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131
+K N+ S+ L + ++I + +++ + + + L + L L N+LT
Sbjct: 26 TIKDNLKKKSVTDA--VTQNELNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLT 81
Query: 132 GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYT 191
I P + NL L + L N + L + L +L L+ L L+ N +
Sbjct: 82 D-IKP-LANLKNLGWLFLDENKVK-DLSS-LKDLKKLKSLSLEHNGIS------------ 125
Query: 192 ANIHGMYASSANLTGLCHLSQLKVADFSYN 221
++ GL HL QL+ N
Sbjct: 126 -----------DINGLVHLPQLESLYLGNN 144
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 9e-09
Identities = 24/129 (18%), Positives = 43/129 (33%), Gaps = 29/129 (22%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
+ L ++ + L + + + + + I L + K+ L N
Sbjct: 23 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQG-IQYLPNVTKLFLNGN 78
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQ 212
LT P L NL +L L LD N+++ +L+ L L +
Sbjct: 79 KLTDIKP--LANLKNLGWLFLDENKVK-----------------------DLSSLKDLKK 113
Query: 213 LKVADFSYN 221
LK +N
Sbjct: 114 LKSLSLEHN 122
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 8e-11
Identities = 20/95 (21%), Positives = 39/95 (41%), Gaps = 5/95 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L L+++ N + I + + L +N+L + ++ L L + L+S
Sbjct: 56 LPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLEN-VQHKMFKGLESLKTLMLRS 114
Query: 152 NGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N +T + + L S+ L L N++ V G
Sbjct: 115 NRIT-CVGNDSFIGLSSVRLLSLYDNQIT-TVAPG 147
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 1e-08
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 6/99 (6%)
Query: 91 GLLTYLQELILHGNNLIGIIPK-ELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKIN 148
+ Y EL L+ N + L +L+ ++ N++T I +G+ +I
Sbjct: 29 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITD-IEEGAFEGASGVNEIL 87
Query: 149 LQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAGS 186
L SN L + ++ L SL+ L L NR+ V S
Sbjct: 88 LTSNRLE-NVQHKMFKGLESLKTLMLRSNRIT-CVGNDS 124
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 2e-10
Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L+ + L N + + P L+ L L L N++T +P + L L + L +
Sbjct: 55 YKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITE-LPKSLFEGLFSLQLLLLNA 113
Query: 152 NGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N + L + +L +L L L N+LQ + G
Sbjct: 114 NKIN-CLRVDAFQDLHNLNLLSLYDNKLQ-TIAKG 146
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 2e-09
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
L + E+ L N + I P K+L+ +DL NQ++ + P+ L L + L
Sbjct: 29 NLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISE-LAPDAFQGLRSLNSLVL 87
Query: 150 QSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N +T LP L L SL+ L L+ N++ +
Sbjct: 88 YGNKIT-ELPKSLFEGLFSLQLLLLNANKIN-CLRVD 122
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 2e-08
Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L L L+L+GN + + L L++L L N++ + + +L L ++L
Sbjct: 79 LRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINC-LRVDAFQDLHNLNLLSLYD 137
Query: 152 NGLTGRLPAELGNLISLEELHLDRN 176
N L L +++ +HL +N
Sbjct: 138 NKLQTIAKGTFSPLRAIQTMHLAQN 162
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 60.9 bits (147), Expect = 3e-10
Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 4/89 (4%)
Query: 93 LTYLQELILHGNNLIGIIPKE-LGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQ 150
L EL + + + L L L+ L + + L + P+ L ++NL
Sbjct: 30 AENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDAFHFTPRLSRLNLS 88
Query: 151 SNGLTGRLPAELGNLISLEELHLDRNRLQ 179
N L L + +SL+EL L N L
Sbjct: 89 FNALE-SLSWKTVQGLSLQELVLSGNPLH 116
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 47.0 bits (111), Expect = 8e-06
Identities = 13/72 (18%), Positives = 24/72 (33%), Gaps = 3/72 (4%)
Query: 110 IPKELGLLKRLKILDLGTNQLTGPIPPE-IGNLTGLVKINLQSNGLTGRLPAE-LGNLIS 167
L + L L + Q + + L L + + +GL + +
Sbjct: 23 SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDAFHFTPR 81
Query: 168 LEELHLDRNRLQ 179
L L+L N L+
Sbjct: 82 LSRLNLSFNALE 93
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 60.6 bits (147), Expect = 4e-10
Identities = 27/153 (17%), Positives = 47/153 (30%), Gaps = 30/153 (19%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
L EL L I L+ +++ N + I ++ NL L +I +
Sbjct: 27 DLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRI 86
Query: 150 Q-SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLC 208
+ +N L P NL +L+ L + ++ +P
Sbjct: 87 EKANNLLYINPEAFQNLPNLQYLLISNTGIK-HLPDVHK--------------------I 125
Query: 209 HLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
H Q + D N + + SF G
Sbjct: 126 HSLQKVLLDIQDNIN-------IHTIERNSFVG 151
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 53.3 bits (128), Expect = 9e-08
Identities = 31/159 (19%), Positives = 58/159 (36%), Gaps = 21/159 (13%)
Query: 93 LTYLQELILHGNNLIGIIP----KELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKI 147
L+++ + N+++ +I L L ++I N L I PE NL L +
Sbjct: 53 FGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK--ANNLLY-INPEAFQNLPNLQYL 109
Query: 148 NLQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT- 205
+ + G+ LP + + L + N + S G + ++ + +
Sbjct: 110 LISNTGIK-HLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 168
Query: 206 ---GLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
+ +QL + S N LE LP+ F G
Sbjct: 169 IHNSAFNGTQLDELNLSDN-------NNLEELPNDVFHG 200
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 51.8 bits (124), Expect = 2e-07
Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 4/89 (4%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
GL L L+ N + I + ++ N L +P ++ +G V +++
Sbjct: 151 GLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLEE-LPNDVFHGASGPVILDI 209
Query: 150 QSNGLTGRLPAE-LGNLISLEELHLDRNR 177
+ LP+ L NL L +
Sbjct: 210 SRTRIH-SLPSYGLENLKKLRARSTYNLK 237
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 5e-10
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 8/100 (8%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L+ LQ+L+ NL + +G LK LK L++ N + PE NLT L ++L S
Sbjct: 99 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSS 158
Query: 152 NGLTGRLPAE----LGNLISLE-ELHLDRNRLQGAVPAGS 186
N + + L + L L L N + + G+
Sbjct: 159 NKIQ-SIYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQPGA 196
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 2e-09
Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 4/91 (4%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
L + L L N L + L++LDL ++ I +L+ L + L
Sbjct: 25 NLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT-IEDGAYQSLSHLSTLIL 83
Query: 150 QSNGLTGRLPAEL-GNLISLEELHLDRNRLQ 179
N + L L SL++L L
Sbjct: 84 TGNPIQ-SLALGAFSGLSSLQKLVAVETNLA 113
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 3e-07
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 9/99 (9%)
Query: 93 LTYLQELILHGNNLIGIIPKEL-GLLKRLKILDLGTNQLTGPIPPEI----GNLTGL-VK 146
L L+EL + N + E L L+ LDL +N++ I + L +
Sbjct: 123 LKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS-IYCTDLRVLHQMPLLNLS 181
Query: 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG 185
++L N + + I L+EL LD N+L+ +VP G
Sbjct: 182 LDLSLNPMN-FIQPGAFKEIRLKELALDTNQLK-SVPDG 218
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 5e-07
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 5/88 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKI----LDLGTNQLTGPIPPEIGNLTGLVKIN 148
LT L+ L L N + I +L +L ++ + LDL N + I P L ++
Sbjct: 148 LTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF-IQPGAFKEIRLKELA 206
Query: 149 LQSNGLTGRLPAELGNLISLEELHLDRN 176
L +N L L SL+++ L N
Sbjct: 207 LDTNQLKSVPDGIFDRLTSLQKIWLHTN 234
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 5e-10
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
+ ++L L N L + K L +L++L L N+L +P I L L + +
Sbjct: 34 NIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQT-LPAGIFKELKNLETLWV 92
Query: 150 QSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N L LP + L++L EL LDRN+L+ ++P
Sbjct: 93 TDNKLQ-ALPIGVFDQLVNLAELRLDRNQLK-SLPPR 127
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 1e-09
Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L L+ L + N L + L L L L NQL +PP + +LT L ++L
Sbjct: 84 LKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKS-LPPRVFDSLTKLTYLSLGY 142
Query: 152 NGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N L LP + L SL+EL L N+L+ VP G
Sbjct: 143 NELQ-SLPKGVFDKLTSLKELRLYNNQLK-RVPEG 175
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 7e-09
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L L EL L N L + P+ L +L L LG N+L +P + LT L ++ L +
Sbjct: 108 LVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQS-LPKGVFDKLTSLKELRLYN 166
Query: 152 NGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N L R+P L L+ L LD N+L+ VP G
Sbjct: 167 NQLK-RVPEGAFDKLTELKTLKLDNNQLK-RVPEG 199
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 4e-07
Identities = 27/85 (31%), Positives = 33/85 (38%), Gaps = 2/85 (2%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
LT L L L N L + L LK L L NQL +P LT L + L +
Sbjct: 132 LTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKR-VPEGAFDKLTELKTLKLDN 190
Query: 152 NGLTGRLPAELGNLISLEELHLDRN 176
N L +L L+ L L N
Sbjct: 191 NQLKRVPEGAFDSLEKLKMLQLQEN 215
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 9e-10
Identities = 38/176 (21%), Positives = 67/176 (38%), Gaps = 39/176 (22%)
Query: 89 ELGLLTYLQELILHGN-NLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
+ + T +++ LHG I + L LK K L L TN + +I +L+G+ +
Sbjct: 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIE-----KISSLSGMENL 72
Query: 148 ---NLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANL 204
+L N + ++ +LEEL + N++ +L
Sbjct: 73 RILSLGRNLIK-KIENLDAVADTLEELWISYNQIA-----------------------SL 108
Query: 205 TGLCHLSQLKVADFSYNFFVGSIP-----KCLEYLPSTSFQGNCLQNKDPKQRATT 255
+G+ L L+V S N + + L+ L GN L N + AT+
Sbjct: 109 SGIEKLVNLRVLYMSNN-KITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATS 163
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 2e-09
Identities = 23/135 (17%), Positives = 54/135 (40%), Gaps = 14/135 (10%)
Query: 90 LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149
L + L ++ ++ L ++ + + + + + T L +++L
Sbjct: 15 DPGLANAVKQNLGKQSVTDLVS--QKELSGVQNFNGDNSNIQS-LAG-MQFFTNLKELHL 70
Query: 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASS---ANLTG 206
N ++ L L +L LEEL ++RNRL+ + ++ + ++ + +
Sbjct: 71 SHNQIS-DLSP-LKDLTKLEELSVNRNRLK-NLNGIPSA----CLSRLFLDNNELRDTDS 123
Query: 207 LCHLSQLKVADFSYN 221
L HL L++ N
Sbjct: 124 LIHLKNLEILSIRNN 138
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 6e-09
Identities = 30/132 (22%), Positives = 48/132 (36%), Gaps = 30/132 (22%)
Query: 90 LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149
L LT L+EL ++ N L + + L L L N+L + +L L +++
Sbjct: 81 LKDLTKLEELSVNRNRLKNLNG--IPSAC-LSRLFLDNNELRDTDS--LIHLKNLEILSI 135
Query: 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCH 209
++N L + LG L LE L L N + N GL
Sbjct: 136 RNNKLK-SIVM-LGFLSKLEVLDLHGNEIT-----------------------NTGGLTR 170
Query: 210 LSQLKVADFSYN 221
L ++ D +
Sbjct: 171 LKKVNWIDLTGQ 182
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 2e-08
Identities = 22/124 (17%), Positives = 43/124 (34%), Gaps = 29/124 (23%)
Query: 98 ELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGR 157
E I + + P L +LG +T + L+G+ N ++ +
Sbjct: 1 ESIQRPTPINQVFP--DPGLANAVKQNLGKQSVTDLVS--QKELSGVQNFNGDNSNIQ-S 55
Query: 158 LPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVAD 217
L + +L+ELHL N++ +L+ L L++L+
Sbjct: 56 LAG-MQFFTNLKELHLSHNQIS-----------------------DLSPLKDLTKLEELS 91
Query: 218 FSYN 221
+ N
Sbjct: 92 VNRN 95
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 2e-07
Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 7/89 (7%)
Query: 90 LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149
+ L L L N L L LK L+IL + N+L I +G L+ L ++L
Sbjct: 103 IPSAC-LSRLFLDNNELRDTDS--LIHLKNLEILSIRNNKLKS-IVM-LGFLSKLEVLDL 157
Query: 150 QSNGLTGRLPAELGNLISLEELHLDRNRL 178
N +T L L + + L +
Sbjct: 158 HGNEITNTGG--LTRLKKVNWIDLTGQKC 184
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 7e-09
Identities = 29/161 (18%), Positives = 56/161 (34%), Gaps = 13/161 (8%)
Query: 318 KSKPSIIIPWKKSASEKDHIYIDSEILKDVVRFSRQELEVACEDFSNIIGSSPDSLVYKG 377
+ K + + E + + +EL+ IG V G
Sbjct: 158 TDADGLCTRLIKPKVMEGTVAAQDEFYRSGWALNMKELK-----LLQTIGKGEFGDVMLG 212
Query: 378 TMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437
+G +AV + K F E + + ++ H N +LLG E +
Sbjct: 213 DYRGNK-VAVKCI--KN----DATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGL-YI 264
Query: 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
V +Y + G+L ++L R + +K + + ++YL
Sbjct: 265 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 305
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 1e-08
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 97 QELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQSNGLT 155
EL L GN ++PKEL K L ++DL N+++ + + N+T L+ + L N L
Sbjct: 34 TELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRIS-TLSNQSFSNMTQLLTLILSYNRLR 91
Query: 156 GRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
+P L SL L L N + VP G
Sbjct: 92 -CIPPRTFDGLKSLRLLSLHGNDIS-VVPEG 120
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 1e-08
Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 7/107 (6%)
Query: 374 VYKGTMKGGP-EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432
V+ G ++ +AV S +E L+ F +E L + +H N +L+G C + P
Sbjct: 130 VFSGRLRADNTLVAVKSC--RETL-PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQP 186
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+V + G L E ++ +++V A G++YL
Sbjct: 187 I--YIVMELVQGGDFLTFLR-TEGARLRVKTLLQMVGDAAAGMEYLE 230
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 1e-08
Identities = 21/109 (19%), Positives = 41/109 (37%), Gaps = 5/109 (4%)
Query: 374 VYKGTMKGGPEIAVISLCIKE--EHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431
V + + +K +++E+ L + HE+ K G C ++
Sbjct: 47 VSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAG 106
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
+ LV +Y G+L ++L R + + + I G+ YLH
Sbjct: 107 AASLQLVMEYVPLGSLRDYLP---RHSIGLAQLLLFAQQICEGMAYLHA 152
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 56.0 bits (135), Expect = 2e-08
Identities = 21/101 (20%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 91 GLLTYLQELILHGNNL----IGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLV 145
+ + L +L + + + +L+L +N LTG + + + L
Sbjct: 397 LMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKVKVL- 455
Query: 146 KINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGS 186
+L +N + +P ++ +L +L+EL++ N+L+ +VP G
Sbjct: 456 --DLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGV 492
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 52.6 bits (126), Expect = 2e-07
Identities = 21/113 (18%), Positives = 38/113 (33%), Gaps = 26/113 (23%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI------------ 138
L + L L N++ + ++ L L++L L N++ + +
Sbjct: 49 DLPPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRS-LDFHVFLFNQDLEYLDV 107
Query: 139 ----------GNLTGLVKINLQSNGLTGRLP--AELGNLISLEELHLDRNRLQ 179
+ L ++L N LP E GNL L L L + +
Sbjct: 108 SHNRLQNISCCPMASLRHLDLSFNDFD-VLPVCKEFGNLTKLTFLGLSAAKFR 159
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 50.6 bits (121), Expect = 8e-07
Identities = 28/124 (22%), Positives = 46/124 (37%), Gaps = 6/124 (4%)
Query: 65 CSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNL--IGIIPKELGLLKRLKI 122
C + +N + + + L LQ LIL N L + + L+
Sbjct: 348 CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLET 407
Query: 123 LDLGTNQLT-GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGA 181
LD+ N L ++ +NL SN LTG + L ++ L L NR+ +
Sbjct: 408 LDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCL--PPKVKVLDLHNNRIM-S 464
Query: 182 VPAG 185
+P
Sbjct: 465 IPKD 468
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 47.2 bits (112), Expect = 1e-05
Identities = 22/173 (12%), Positives = 41/173 (23%), Gaps = 19/173 (10%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+ I+ + L L + + + + I L +
Sbjct: 286 LTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIH 345
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANI 194
+ + +N N T + L L+ L L RN L+ +
Sbjct: 346 MVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLK-NFFKVALM------ 398
Query: 195 HGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNK 247
++S L+ D S N + N N
Sbjct: 399 ------------TKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNM 439
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 41.8 bits (98), Expect = 5e-04
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 92 LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQ 150
L ++ L LH N + IPK++ L+ L+ L++ +NQL +P + LT L I L
Sbjct: 448 LPPKVKVLDLHNNRI-MSIPKDVTHLQALQELNVASNQLKS-VPDGVFDRLTSLQYIWLH 505
Query: 151 SN 152
N
Sbjct: 506 DN 507
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 2e-08
Identities = 31/158 (19%), Positives = 58/158 (36%), Gaps = 21/158 (13%)
Query: 335 DHIYIDSEILKDV--VRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPE----IAVI 388
D + I E+ + + V Q+ ++G V + +K +AV
Sbjct: 3 DSLGISDELKEKLEDVLIPEQQFT-----LGRMLGKGEFGSVREAQLKQEDGSFVKVAVK 57
Query: 389 SLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR----MLVFDYASN 444
L K + F RE A + +H + KL+G S R M++ + +
Sbjct: 58 ML--KADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKH 115
Query: 445 GTLYEHL----HYGERCQVSWTRRMKIVIGIARGLKYL 478
G L+ L + ++ ++ IA G++YL
Sbjct: 116 GDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYL 153
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 2e-08
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 9/148 (6%)
Query: 336 HIYIDSEILKDVVRFSRQ---ELEVACEDFSNIIGSSPDSLVYKGTMK--GGPEIAVISL 390
++D +D + + EL+ ++G+ V G +K EI+V
Sbjct: 20 RTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 391 CIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEH 450
+K + T F E + + + +H N +L G +S P M+V +Y NG+L
Sbjct: 80 TLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--MIVTEYMENGSLDSF 136
Query: 451 LHYGERCQVSWTRRMKIVIGIARGLKYL 478
L + Q + + + ++ GIA G+KYL
Sbjct: 137 LRKHDA-QFTVIQLVGMLRGIASGMKYL 163
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 2e-08
Identities = 27/145 (18%), Positives = 55/145 (37%), Gaps = 7/145 (4%)
Query: 336 HIYIDSEILKDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKE- 394
H + +D F + L+ + + +G V + + +K+
Sbjct: 6 HHHAQLYACQDPTIFEERHLK-----YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQL 60
Query: 395 EHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYG 454
+H + FQRE+ L ++ + K G + LV +Y +G L + L
Sbjct: 61 QHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ-R 119
Query: 455 ERCQVSWTRRMKIVIGIARGLKYLH 479
R ++ +R + I +G++YL
Sbjct: 120 HRARLDASRLLLYSSQICKGMEYLG 144
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 2e-08
Identities = 24/154 (15%), Positives = 48/154 (31%), Gaps = 31/154 (20%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTN-QLTGPIPPEI-GNLTGLVKIN 148
L Q L L +L I L + + + + L + NL+ + I
Sbjct: 28 SLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQ-LESHSFYNLSKVTHIE 86
Query: 149 LQSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL 207
+++ + + L L L+ L + L+ P +LT +
Sbjct: 87 IRNTRNLTYIDPDALKELPLLKFLGIFNTGLK-MFP-------------------DLTKV 126
Query: 208 CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
+ + + N + +P +FQG
Sbjct: 127 YSTDIFFILEITDN-------PYMTSIPVNAFQG 153
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 4e-08
Identities = 20/101 (19%), Positives = 33/101 (32%), Gaps = 6/101 (5%)
Query: 90 LGLLTYLQELILHGNNLIGIIPKEL--GLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
+ L + N + IP GL L L N T + N T L +
Sbjct: 126 VYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTS-VQGYAFNGTKLDAV 184
Query: 148 NLQSNGLTGRLPAE-LGNLIS-LEELHLDRNRLQGAVPAGS 186
L N + + G + S L + + + A+P+
Sbjct: 185 YLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSKG 224
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 2e-07
Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 11/131 (8%)
Query: 93 LTYLQELILHGNNLIGIIPKE--LGLLKRLKILDLGTNQLTGPIPPEI-GNLTG-LVKIN 148
L L+ L + N + + P + IL++ N IP L + +
Sbjct: 104 LPLLKFLGIF-NTGLKMFPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLK 162
Query: 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT--- 205
L +NG T + N L+ ++L++N+ + + G + + S ++T
Sbjct: 163 LYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALP 221
Query: 206 --GLCHLSQLK 214
GL HL +L
Sbjct: 222 SKGLEHLKELI 232
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 7e-05
Identities = 13/62 (20%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 93 LTYLQELILHGNNLIGIIPKEL--GLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150
T L + L+ N + +I K+ G+ +LD+ +T +P + L L ++ +
Sbjct: 178 GTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSKG--LEHLKELIAR 234
Query: 151 SN 152
+
Sbjct: 235 NT 236
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 54.1 bits (131), Expect = 3e-08
Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 10/131 (7%)
Query: 350 FSRQELEVACED--FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQR 407
F R + ++ IG V G +G ++AV + K F
Sbjct: 11 FYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRG-NKVAVKCI--KN----DATAQAFLA 63
Query: 408 EVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKI 467
E + + ++ H N +LLG E +V +Y + G+L ++L R + +K
Sbjct: 64 EASVMTQLRHSNLVQLLGVIVEEKGGL-YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF 122
Query: 468 VIGIARGLKYL 478
+ + ++YL
Sbjct: 123 SLDVCEAMEYL 133
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 54.8 bits (132), Expect = 3e-08
Identities = 32/155 (20%), Positives = 55/155 (35%), Gaps = 10/155 (6%)
Query: 328 KKSASEKDHIYIDSEILKDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPE--- 384
+ D ++ E+++ V F+ +IG VY GT+
Sbjct: 60 GANTVHIDLSALNPELVQAVQHVVI-GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKI 118
Query: 385 -IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443
AV SL F E + +H N LLG C S + ++V Y
Sbjct: 119 HCAVKSL--NRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLVVLPYMK 174
Query: 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
+G L + E + + + +A+G+K+L
Sbjct: 175 HGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKFL 208
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 55.2 bits (133), Expect = 3e-08
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
VY+G K + V +KE+ F +E A + I H N +LLG C PF
Sbjct: 236 VYEGVWKK-YSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 291
Query: 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
++ ++ + G L ++L R +VS + + I+ ++YL
Sbjct: 292 --YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 335
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 3e-08
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 374 VYKGTMKGGP-EIAVISLCIKEEHWTGYLELY-FQREVADLARINHENTGKLLGYCRESS 431
VY+G K +AV +L KE +E+ F +E A + I H N +LLG C
Sbjct: 29 VYEGVWKKYSLTVAVKTL--KE----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
PF ++ ++ + G L ++L R +VS + + I+ ++YL
Sbjct: 83 PF--YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 3e-08
Identities = 22/108 (20%), Positives = 45/108 (41%), Gaps = 3/108 (2%)
Query: 374 VYKGTMKGGPEIAVISLCIKE--EHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431
V + + +K G ++E+ L + HEN K G C E
Sbjct: 37 VELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG 96
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
L+ ++ +G+L E+L + +++ +++K + I +G+ YL
Sbjct: 97 GNGIKLIMEFLPSGSLKEYLP-KNKNKINLKQQLKYAVQICKGMDYLG 143
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 3e-08
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 97 QELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQSNGLT 155
++L L L + L +L L+L NQL + + +LT L + L +N L
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQT-LSAGVFDDLTELGTLGLANNQLA 96
Query: 156 GRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
LP + +L L++L+L N+L+ ++P+G
Sbjct: 97 -SLPLGVFDHLTQLDKLYLGGNQLK-SLPSG 125
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 6e-08
Identities = 35/95 (36%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
LT L L L N L + L L L L NQL +P + +LT L K+ L
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLAS-LPLGVFDHLTQLDKLYLGG 116
Query: 152 NGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N L LP+ + L L+EL L+ N+LQ ++PAG
Sbjct: 117 NQLK-SLPSGVFDRLTKLKELRLNTNQLQ-SIPAG 149
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 3e-07
Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
LT L L L N L + L +L L LG NQL +P + LT L ++ L +
Sbjct: 82 LTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKS-LPSGVFDRLTKLKELRLNT 140
Query: 152 NGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAGS 186
N L +PA L +L+ L L N+LQ +VP G+
Sbjct: 141 NQLQ-SIPAGAFDKLTNLQTLSLSTNQLQ-SVPHGA 174
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 2e-05
Identities = 29/85 (34%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
LT L +L L GN L + L +LK L L TNQL IP LT L ++L +
Sbjct: 106 LTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQS-IPAGAFDKLTNLQTLSLST 164
Query: 152 NGLTGRLPAELGNLISLEELHLDRN 176
N L L L+ + L N
Sbjct: 165 NQLQSVPHGAFDRLGKLQTITLFGN 189
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 4e-08
Identities = 33/148 (22%), Positives = 54/148 (36%), Gaps = 10/148 (6%)
Query: 335 DHIYIDSEILKDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPE----IAVISL 390
D ++ E+++ V F+ +IG VY GT+ AV SL
Sbjct: 3 DLSALNPELVQAVQHVVI-GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL 61
Query: 391 CIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEH 450
F E + +H N LLG C S + ++V Y +G L
Sbjct: 62 --NRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNF 117
Query: 451 LHYGERCQVSWTRRMKIVIGIARGLKYL 478
+ E + + + +A+G+KYL
Sbjct: 118 IR-NETHNPTVKDLIGFGLQVAKGMKYL 144
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 4e-08
Identities = 21/126 (16%), Positives = 48/126 (38%), Gaps = 10/126 (7%)
Query: 354 ELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELY-FQREVADL 412
E+ +G+ V+ T ++AV ++ K G + + F E +
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM--KP----GSMSVEAFLAEANVM 237
Query: 413 ARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIA 472
+ H+ KL + P ++ ++ + G+L + L E + + + IA
Sbjct: 238 KTLQHDKLVKLHAVVTKE-PI--YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIA 294
Query: 473 RGLKYL 478
G+ ++
Sbjct: 295 EGMAFI 300
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 4e-08
Identities = 24/107 (22%), Positives = 43/107 (40%), Gaps = 6/107 (5%)
Query: 374 VYKGTMKGGPEIAVISLCIK--EEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431
VYKG E I + IK E + E +A +++ + +LLG C S+
Sbjct: 31 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 90
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
L+ G L +++ + + + + IA+G+ YL
Sbjct: 91 V---QLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYL 133
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 5e-08
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 5/107 (4%)
Query: 374 VYKGTMKGGPEIAVISLCIK--EEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431
VYKG +K + + IK + +T + F E + + +H N +L G +
Sbjct: 60 VYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK 119
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
P M++ +Y NG L + L + + S + + ++ GIA G+KYL
Sbjct: 120 PM--MIITEYMENGALDKFLREKDG-EFSVLQLVGMLRGIAAGMKYL 163
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 5e-08
Identities = 25/113 (22%), Positives = 46/113 (40%), Gaps = 10/113 (8%)
Query: 374 VYKGTMKGGPEIAVISLC-IK--EEHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430
VY+G + G P +K E + EL F E +++ NH+N + +G +S
Sbjct: 46 VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 105
Query: 431 SPFTRMLVFDYASNGTLYEHL-----HYGERCQVSWTRRMKIVIGIARGLKYL 478
P ++ + + G L L + ++ + + IA G +YL
Sbjct: 106 LPR--FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 6e-08
Identities = 26/125 (20%), Positives = 45/125 (36%), Gaps = 8/125 (6%)
Query: 354 ELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLA 413
E+ +G V+ GT G +A IK F +E +
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVA-----IKTLKPGTMSPEAFLQEAQVMK 234
Query: 414 RINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIAR 473
++ HE +L E P +V +Y S G+L + L + + + + IA
Sbjct: 235 KLRHEKLVQLYAVVSEE-PI--YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 291
Query: 474 GLKYL 478
G+ Y+
Sbjct: 292 GMAYV 296
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 6e-08
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Query: 91 GLLTYLQELILHGNNLIGIIPKEL-GLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKIN 148
+ + EL+L+ N L I L G L L L+L NQLTG I P + + ++
Sbjct: 26 DIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTG-IEPNAFEGASHIQELQ 84
Query: 149 LQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAGS 186
L N + + ++ L L+ L+L N++ V GS
Sbjct: 85 LGENKIK-EISNKMFLGLHQLKTLNLYDNQIS-CVMPGS 121
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 2e-04
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L +L +L L N L GI P ++ L LG N++ I ++ L L +NL
Sbjct: 53 LPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKE-ISNKMFLGLHQLKTLNLYD 111
Query: 152 NGLTGRLPAELGNLISLEELHLDRN 176
N ++ +P +L SL L+L N
Sbjct: 112 NQISCVMPGSFEHLNSLTSLNLASN 136
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 6e-08
Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 13/116 (11%)
Query: 374 VYKGTMKGGPE----IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRE 429
V +G +K +AV ++ K ++ + F E A + +H N +LLG C E
Sbjct: 50 VMEGNLKQEDGTSLKVAVKTM--KLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIE 107
Query: 430 SSPFTR---MLVFDYASNGTLYEHL----HYGERCQVSWTRRMKIVIGIARGLKYL 478
S M++ + G L+ +L + +K ++ IA G++YL
Sbjct: 108 MSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL 163
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 6e-08
Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 374 VYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432
V KG + V +K E L+ E + ++++ +++G C E+
Sbjct: 33 VKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAES 91
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
+ MLV + A G L ++L V +++V ++ G+KYL
Sbjct: 92 W--MLVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYL 133
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 53.6 bits (129), Expect = 6e-08
Identities = 25/113 (22%), Positives = 46/113 (40%), Gaps = 10/113 (8%)
Query: 374 VYKGTMKGGPEIAVISLC-IK--EEHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430
VY+G + G P +K E + EL F E +++ NH+N + +G +S
Sbjct: 87 VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 146
Query: 431 SPFTRMLVFDYASNGTLYEHL-----HYGERCQVSWTRRMKIVIGIARGLKYL 478
P ++ + + G L L + ++ + + IA G +YL
Sbjct: 147 LPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 7e-08
Identities = 37/95 (38%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGN-LTGLVKINLQS 151
LT L LIL GN L + L LK L L NQL +P + + LT L +NL
Sbjct: 84 LTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQS-LPDGVFDKLTNLTYLNLAH 142
Query: 152 NGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N L LP + L +L EL L N+LQ ++P G
Sbjct: 143 NQLQ-SLPKGVFDKLTNLTELDLSYNQLQ-SLPEG 175
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 2e-07
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
LT L+EL+L N L + L L L+L NQL +P + LT L +++L
Sbjct: 108 LTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQS-LPKGVFDKLTNLTELDLSY 166
Query: 152 NGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N L LP + L L++L L +N+L+ +VP G
Sbjct: 167 NQLQ-SLPEGVFDKLTQLKDLRLYQNQLK-SVPDG 199
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 1e-06
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 17/105 (16%)
Query: 87 APELGLLTYLQELILHGNNLIGI--IPKELGLLKRLKILDLGTNQLTGPIPPEIG---NL 141
A L + ++I + +++ + I L ++ L LG N+L +I L
Sbjct: 34 AVTQNELNSIDQIIANNSDIKSVQGIQY----LPNVRYLALGGNKLH-----DISALKEL 84
Query: 142 TGLVKINLQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
T L + L N L LP + L +L+EL L N+LQ ++P G
Sbjct: 85 TNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQ-SLPDG 127
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 8e-08
Identities = 22/106 (20%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELY-FQREVADLARINHENTGKLLGYCRESSP 432
V+ G ++A+ ++ +E G + F E + +++H +L G C E +P
Sbjct: 24 VHLGYWLNKDKVAIKTI--RE----GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP 77
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
LV ++ +G L ++L +R + + + + + G+ YL
Sbjct: 78 I--CLVTEFMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYL 120
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 8e-08
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 6/107 (5%)
Query: 374 VYKGTMKGGPEIAVISLCIK--EEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431
V+KG E I +CIK E+ + + ++H + +LLG C SS
Sbjct: 29 VHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSS 88
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
LV Y G+L +H+ + + + IA+G+ YL
Sbjct: 89 L---QLVTQYLPLGSLLDHVRQHRG-ALGPQLLLNWGVQIAKGMYYL 131
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 9e-08
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELY-FQREVADLARINHENTGKLLGYCRESSP 432
V G KG ++AV + KE G + F +E + +++H K G C + P
Sbjct: 24 VKLGKWKGQYDVAVKMI--KE----GSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYP 77
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
+V +Y SNG L +L + ++ +++ + G+ +L
Sbjct: 78 I--YIVTEYISNGCLLNYLR-SHGKGLEPSQLLEMCYDVCEGMAFL 120
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 53.3 bits (128), Expect = 1e-07
Identities = 26/125 (20%), Positives = 45/125 (36%), Gaps = 8/125 (6%)
Query: 354 ELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLA 413
E+ +G V+ GT G +A IK F +E +
Sbjct: 263 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVA-----IKTLKPGTMSPEAFLQEAQVMK 317
Query: 414 RINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIAR 473
++ HE +L E P +V +Y S G+L + L + + + + IA
Sbjct: 318 KLRHEKLVQLYAVVSEE-PI--YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 374
Query: 474 GLKYL 478
G+ Y+
Sbjct: 375 GMAYV 379
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 1e-07
Identities = 24/108 (22%), Positives = 45/108 (41%), Gaps = 7/108 (6%)
Query: 374 VYKGTMKG--GPEIAVISLCIKEEHWTGYLELY-FQREVADLARINHENTGKLLGYCRES 430
V +G G ++V C+K + + + F REV + ++H N +L G +
Sbjct: 34 VRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVV-LT 92
Query: 431 SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
P +V + A G+L + L + + + +A G+ YL
Sbjct: 93 PPM--KMVTELAPLGSLLDRLRKHQG-HFLLGTLSRYAVQVAEGMGYL 137
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 1e-07
Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 9/147 (6%)
Query: 337 IYIDSEILKDVVRFSRQ---ELEVACEDFSNIIGSSPDSLVYKGTMK--GGPEIAVISLC 391
Y + ++ R R E+E + IIGS V G ++ G ++ V
Sbjct: 25 FYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKA 84
Query: 392 IKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL 451
+K + T F E + + + +H N +L G M+V +Y NG+L L
Sbjct: 85 LKAGY-TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLA--MIVTEYMENGSLDTFL 141
Query: 452 HYGERCQVSWTRRMKIVIGIARGLKYL 478
+ Q + + + ++ G+ G++YL
Sbjct: 142 RTHDG-QFTIMQLVGMLRGVGAGMRYL 167
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 1e-07
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L L+EL L N L + L +L +LDLGTNQLT +P + L L ++ +
Sbjct: 63 LINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTV-LPSAVFDRLVHLKELFMCC 121
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG 185
N LT LP + L L L LD+N+L+ ++P G
Sbjct: 122 NKLT-ELPRGIERLTHLTHLALDQNQLK-SIPHG 153
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 2e-07
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Query: 83 KGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNL 141
K + G+ T Q L LH N + + P L LK L LG+NQL +P + +L
Sbjct: 29 KRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGA-LPVGVFDSL 87
Query: 142 TGLVKINLQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
T L ++L +N LT LP+ + L+ L+EL + N+L +P G
Sbjct: 88 TQLTVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKLT-ELPRG 130
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 52.2 bits (126), Expect = 1e-07
Identities = 26/126 (20%), Positives = 55/126 (43%), Gaps = 10/126 (7%)
Query: 354 ELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELY-FQREVADL 412
E++ F +G+ +V G +G ++A+ + KE G + F E +
Sbjct: 20 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI--KE----GSMSEDEFIEEAKVM 73
Query: 413 ARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIA 472
++HE +L G C + P ++ +Y +NG L +L R + + +++ +
Sbjct: 74 MNLSHEKLVQLYGVCTKQRPI--FIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVC 130
Query: 473 RGLKYL 478
++YL
Sbjct: 131 EAMEYL 136
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 1e-07
Identities = 24/107 (22%), Positives = 43/107 (40%), Gaps = 6/107 (5%)
Query: 374 VYKGTMKGGPEIAVISLCIK--EEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431
VYKG E I + IK E + E +A +++ + +LLG C S+
Sbjct: 31 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 90
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
L+ G L +++ + + + + IA+G+ YL
Sbjct: 91 V---QLITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYL 133
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 1e-07
Identities = 22/111 (19%), Positives = 45/111 (40%), Gaps = 10/111 (9%)
Query: 374 VYKGTMKGGPE-----IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCR 428
V + +AV L + + F+RE+ L + H+N K G C
Sbjct: 26 VEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRD--FEREIEILKSLQHDNIVKYKGVCY 81
Query: 429 ESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+ L+ +Y G+L ++L + ++ + ++ I +G++YL
Sbjct: 82 SAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLG 131
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 1e-07
Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Query: 81 SLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGN 140
+G + G+ L L N+L + L L L LG N+L +P + N
Sbjct: 15 YSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQS-LPNGVFN 73
Query: 141 -LTGLVKINLQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
LT L +NL +N L LP + L L+EL L+ N+LQ ++P G
Sbjct: 74 KLTSLTYLNLSTNQLQ-SLPNGVFDKLTQLKELALNTNQLQ-SLPDG 118
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 8e-07
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
LT L +L L GN L + L L L+L TNQL +P + LT L ++ L +
Sbjct: 51 LTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQS-LPNGVFDKLTQLKELALNT 109
Query: 152 NGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N L LP + L L++L L +N+L+ +VP G
Sbjct: 110 NQLQ-SLPDGVFDKLTQLKDLRLYQNQLK-SVPDG 142
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 2e-07
Identities = 22/111 (19%), Positives = 45/111 (40%), Gaps = 10/111 (9%)
Query: 374 VYKGTMKGGPE-----IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCR 428
V + +AV L + + F+RE+ L + H+N K G C
Sbjct: 57 VEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRD--FEREIEILKSLQHDNIVKYKGVCY 112
Query: 429 ESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+ L+ +Y G+L ++L + ++ + ++ I +G++YL
Sbjct: 113 SAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLG 162
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 3e-07
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 22/123 (17%)
Query: 374 VYKGTMKGGPEIAVISLC----IKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRE 429
V+ L +K+ T FQRE L + HE+ K G C +
Sbjct: 31 VFLAECYNLSPTKDKMLVAVKALKDP--TLAARKDFQREAELLTNLQHEHIVKFYGVCGD 88
Query: 430 SSPFTRMLVFDYASNGTLYEHL--------------HYGERCQVSWTRRMKIVIGIARGL 475
P ++VF+Y +G L + L + ++ ++ + I IA G+
Sbjct: 89 GDPL--IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGM 146
Query: 476 KYL 478
YL
Sbjct: 147 VYL 149
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 3e-07
Identities = 24/116 (20%), Positives = 47/116 (40%), Gaps = 13/116 (11%)
Query: 374 VYKGTMKGGPEIAVISLC-IK--EEHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430
VY+G KG + + IK E + + F E + + N + +LLG +
Sbjct: 41 VYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 100
Query: 431 SPFTRMLVFDYASNGTLYEHL--------HYGERCQVSWTRRMKIVIGIARGLKYL 478
P +++ + + G L +L + S ++ +++ IA G+ YL
Sbjct: 101 QPT--LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYL 154
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 3e-07
Identities = 26/124 (20%), Positives = 44/124 (35%), Gaps = 25/124 (20%)
Query: 374 VYKGTMKGGPE------IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYC 427
V+ +AV +L KE + FQRE L + H++ + G C
Sbjct: 57 VFLAECHNLLPEQDKMLVAVKAL--KEA--SESARQDFQREAELLTMLQHQHIVRFFGVC 112
Query: 428 RESSPFTRMLVFDYASNGTLYEHL-------------HYGERCQVSWTRRMKIVIGIARG 474
E P ++VF+Y +G L L + + + + +A G
Sbjct: 113 TEGRPL--LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAG 170
Query: 475 LKYL 478
+ YL
Sbjct: 171 MVYL 174
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 5e-07
Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 9/109 (8%)
Query: 374 VYKGTMKGGPE----IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRE 429
VY G + A+ SL F RE + +NH N L+G
Sbjct: 37 VYHGEYIDQAQNRIQCAIKSL--SRIT-EMQQVEAFLREGLLMRGLNHPNVLALIGIMLP 93
Query: 430 SSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
++ Y +G L + + + + + + +ARG++YL
Sbjct: 94 PEG-LPHVLLPYMCHGDLLQFIR-SPQRNPTVKDLISFGLQVARGMEYL 140
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 51.4 bits (123), Expect = 5e-07
Identities = 19/107 (17%), Positives = 40/107 (37%), Gaps = 7/107 (6%)
Query: 374 VYKGTMK--GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431
V++G P +AV K + + F +E + + +H + KL+G +
Sbjct: 406 VHQGIYMSPENPAMAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVI-TEN 463
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
P ++ + + G L L + + + ++ L YL
Sbjct: 464 PV--WIIMELCTLGELRSFLQ-VRKFSLDLASLILYAYQLSTALAYL 507
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.4 bits (122), Expect = 6e-07
Identities = 52/274 (18%), Positives = 89/274 (32%), Gaps = 62/274 (22%)
Query: 290 WLLTL---EIVTGTMVGVL-----FLVAGFTGLQRCKSKPSIIIPWKKSASEKDHIYIDS 341
W L E+V + VL FL++ + PS+ + ++D +Y D+
Sbjct: 69 WTLLSKQEEMVQKFVEEVLRINYKFLMSPIK--TEQRQ-PSM--MTRMYIEQRDRLYNDN 123
Query: 342 EIL-KDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEE---- 395
++ K V SR + + + + + L+ G + G G + +C+ +
Sbjct: 124 QVFAKYNV--SRLQPYLKLRQALLELRPAKNVLID-G-VLGSGKTWVALDVCLSYKVQCK 179
Query: 396 -----HW---------TGYLE----LYFQREVADLARINHENTGKL--------LGYCRE 429
W LE L +Q + +R +H + KL L +
Sbjct: 180 MDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLK 239
Query: 430 SSPFTRML-VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELG---PP 485
S P+ L V N + + C++ T R K V H L
Sbjct: 240 SKPYENCLLVLLNVQNAKAWNAFNLS--CKILLTTRFKQVTDFLSAATTTHISLDHHSMT 297
Query: 486 FTISE-LNSSAVYLTEDFS--P----KVSPLCLS 512
T E + YL P +P LS
Sbjct: 298 LTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLS 331
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.0 bits (121), Expect = 8e-07
Identities = 63/414 (15%), Positives = 125/414 (30%), Gaps = 134/414 (32%)
Query: 35 FKEAIYEDPHLVLSN------WNALDADPCHWTGIACSDARDRVLKI--NISGSSLKGFL 86
K YE+ LVL N WNA + ++C ++L +
Sbjct: 238 LKSKPYENCLLVLLNVQNAKAWNAFN--------LSC-----KILLTTRFKQ-------V 277
Query: 87 APELGLLTYLQELILHGNNLIGIIPKE-LGLLKRLKILDLGTNQLTGPIPPEIGNLTGLV 145
L T + H + + + P E LL LK LD L P E+ +
Sbjct: 278 TDFLSAATTTHISLDH--HSMTLTPDEVKSLL--LKYLDCRPQDL----PREV------L 323
Query: 146 KINLQSNGLTGRLPAELGNLISLEE--LHLDRNRLQGAVPAGSNSGYTANIHGMYASSAN 203
N + + + + ++ + H++ ++L + + N A M+
Sbjct: 324 TTNPRRLSIIA---ESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMF----- 375
Query: 204 LTGLCHLSQLKVADFSYNFFVGSIP-KCLEYL--------PS---TSFQGNCLQNKDPKQ 251
+L V F + IP L + L K PK+
Sbjct: 376 -------DRLSV--FPPS--A-HIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKE 423
Query: 252 RATTLCGGAPPARTRAGLSPKHQAAEDVSKHQS--------ASRPAWLLTLEIVTG---- 299
++ L K + + + H+S + + L +
Sbjct: 424 STISIPSIY--------LELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYS 475
Query: 300 ---------------TMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASE----------K 334
T+ ++FL F L++ K + W S S K
Sbjct: 476 HIGHHLKNIEHPERMTLFRMVFLDFRF--LEQ-KIRHDST-AWNASGSILNTLQQLKFYK 531
Query: 335 DHIY----IDSEILKDVVRFSRQ-ELEVACEDFSNIIG---SSPDSLVYKGTMK 380
+I ++ ++ F + E + C +++++ + D +++ K
Sbjct: 532 PYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHK 585
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.5 bits (104), Expect = 8e-05
Identities = 52/374 (13%), Positives = 103/374 (27%), Gaps = 104/374 (27%)
Query: 16 VLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALD--ADPCHWTGIACSDARDRVL 73
+L T T+ A TT ++ + + L+ + D VL
Sbjct: 268 ILLTTRFKQVTDFLSAATTTHISL-DHHSMTLTPDEVKSLLLK---YLDCRPQDLPREVL 323
Query: 74 KIN---IS--GSSLKGFLAPELGLLTYLQELILHGNNLIGII--------PKEL-GLLKR 119
N +S S++ LA + + + L II P E + R
Sbjct: 324 TTNPRRLSIIAESIRDGLA----TWDNWKHVNC--DKLTTIIESSLNVLEPAEYRKMFDR 377
Query: 120 LKILDLGTNQLTGPIPPEI-----GN---------LTGLVK---INLQSNGLTGRLPA-- 160
L + + IP + + + L K + Q T +P+
Sbjct: 378 LSVFPPSAH-----IPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIY 432
Query: 161 --ELGNLISLEELH---LDRNRLQGAVPAGS-----NSGYTANIHGMYASSANLTGLCHL 210
L + LH +D + + Y + H + HL
Sbjct: 433 LELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYS-HIGH----------HL 481
Query: 211 SQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNKDPKQRATTLCGGAPPARTRAGLS 270
++ + F +L F L+ K + + +
Sbjct: 482 KNIEHPE-RMTLF----RMV--FL-DFRF----LEQK--------IRHDSTAWNASGSIL 521
Query: 271 PKHQAAEDVSKHQSASRPAWLLTLEIVTGTMVGVLFLVAGFTGLQRCKSKPSIIIPWKKS 330
Q + + + P E + ++ FL L K ++ +
Sbjct: 522 NTLQQLKFYKPYICDNDP----KYERLVNAILD--FLPKIEENLICSKYT-DLL----RI 570
Query: 331 A--SEKDHIYIDSE 342
A +E + I+ ++
Sbjct: 571 ALMAEDEAIFEEAH 584
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.7 bits (102), Expect = 1e-04
Identities = 79/538 (14%), Positives = 144/538 (26%), Gaps = 201/538 (37%)
Query: 29 FWALTTFKEAIYE---------DPHLVLSNWNALDADPCHWTGIACSDARDRVLKINISG 79
FW L + +E + + + ++S P T + RDR+ N +
Sbjct: 68 FWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMT-RMYIEQRDRLY--NDNQ 124
Query: 80 SSLKGFLA---PELGLLTYLQEL------ILHGNNLIGIIPKELGLLKRLKILDLGTNQL 130
K ++ P L L L EL ++ G ++G G K
Sbjct: 125 VFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG--VLGS-----G-----K--------- 163
Query: 131 TGPIPPEIGNLTGLVKINLQSNGLTGRLPAE-----LGNLISLEELHLDRNRLQGAVPAG 185
T + S + ++ + L N S E + +L +
Sbjct: 164 -----------TWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQI--- 209
Query: 186 SNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYL-----PST--S 238
+ +T+ N+ H Q ++ CL L +
Sbjct: 210 -DPNWTSRSDHSS----NIKLRIHSIQAELRRL---LKSKPYENCLLVLLNVQNAKAWNA 261
Query: 239 FQGNCLQNKDPKQRATTLCGGAPPARTRA---GLSPKHQAAEDVSKHQSASRPAWLLTLE 295
F +C K TT R + LS H S + LT +
Sbjct: 262 FNLSC------KILLTT--------RFKQVTDFLSAATT------THISLDHHSMTLTPD 301
Query: 296 IVTGTMVGVLFLVAGFTGL-------QRCKSKP---SIIIPWKKSASEKDHIYIDSEILK 345
V L+ + + + P SII + S +D +
Sbjct: 302 -------EVKSLLLKYLDCRPQDLPREVLTTNPRRLSII-----AESIRDGL-------- 341
Query: 346 DVVRFSRQE--LEVACEDFSNIIGSSPDSL-------VYKGTMKGGPEIAV------IS- 389
+ + V C+ + II SS + L ++ ++V I
Sbjct: 342 -----ATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFD-------RLSVFPPSAHIPT 389
Query: 390 --LCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTL 447
L + W + V + KL Y LV T+
Sbjct: 390 ILLSL---IW-FDVIKSDVMVVVN----------KLHKYS---------LVEKQPKESTI 426
Query: 448 YEH-LHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSP 504
++ + ++ LH + + N + ++D P
Sbjct: 427 SIPSIYLELKVKL-------------ENEYALHRSI-----VDHYNIPKTFDSDDLIP 466
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 6e-07
Identities = 16/111 (14%), Positives = 45/111 (40%), Gaps = 11/111 (9%)
Query: 374 VYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYC 427
++KG + E V+ + + H F + +++++H++ G C
Sbjct: 24 IFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSES--FFEAASMMSKLSHKHLVLNYGVC 81
Query: 428 RESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
+LV ++ G+L +L + ++ ++++ +A + +L
Sbjct: 82 VCGDEN--ILVQEFVKFGSLDTYLK-KNKNCINILWKLEVAKQLAAAMHFL 129
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 7e-07
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 25/125 (20%)
Query: 374 VYKGTMKGGPE------IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYC 427
VYKG + G +A+ +L K++ G L F+ E AR+ H N LLG
Sbjct: 25 VYKGHLFGPAPGEQTQAVAIKTL--KDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVV 81
Query: 428 RESSPFTRMLVFDYASNGTLYEHL--------------HYGERCQVSWTRRMKIVIGIAR 473
+ P ++F Y S+G L+E L + + + +V IA
Sbjct: 82 TKDQPL--SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAA 139
Query: 474 GLKYL 478
G++YL
Sbjct: 140 GMEYL 144
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 8e-07
Identities = 20/106 (18%), Positives = 46/106 (43%), Gaps = 10/106 (9%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELY-FQREVADLARINHENTGKLLGYCRESSP 432
V+ G G ++AV +K+ G + F E + ++ H+ +L + P
Sbjct: 29 VWMGYYNGHTKVAV--KSLKQ----GSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-P 81
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
++ +Y NG+L + L +++ + + + IA G+ ++
Sbjct: 82 I--YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 8e-07
Identities = 23/106 (21%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Query: 374 VYKGTMKGGP-EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432
V +G + +I V +K+ RE + ++++ +L+G C ++
Sbjct: 26 VRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEA 83
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
MLV + A G L++ L G+R ++ + +++ ++ G+KYL
Sbjct: 84 L--MLVMEMAGGGPLHKFLV-GKREEIPVSNVAELLHQVSMGMKYL 126
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 1e-06
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 97 QELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQSNGLT 155
L L N L + L +L L L NQ+ +P + LT L + L N L
Sbjct: 31 TRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQS-LPDGVFDKLTKLTILYLHENKLQ 89
Query: 156 GRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
LP + L L+EL LD N+L+ +VP G
Sbjct: 90 -SLPNGVFDKLTQLKELALDTNQLK-SVPDG 118
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 2e-06
Identities = 21/107 (19%), Positives = 41/107 (38%), Gaps = 7/107 (6%)
Query: 374 VYKGTMKG--GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431
VY+G G +I V K++ T + F E + ++H + KL+G E
Sbjct: 28 VYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP 86
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
++ + G L +L + + + + I + + YL
Sbjct: 87 T---WIIMELYPYGELGHYLE-RNKNSLKVLTLVLYSLQICKAMAYL 129
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 2e-06
Identities = 19/107 (17%), Positives = 40/107 (37%), Gaps = 7/107 (6%)
Query: 374 VYKGTMK--GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431
V++G P +AV K + + F +E + + +H + KL+G +
Sbjct: 31 VHQGIYMSPENPALAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVI-TEN 88
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
P ++ + + G L L + + + ++ L YL
Sbjct: 89 PV--WIIMELCTLGELRSFLQVRKY-SLDLASLILYAYQLSTALAYL 132
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 49.6 bits (118), Expect = 2e-06
Identities = 23/106 (21%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Query: 374 VYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432
V +G + +I V +K+ RE + ++++ +L+G C+ +
Sbjct: 352 VRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEAL 410
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
MLV + A G L++ L G+R ++ + +++ ++ G+KYL
Sbjct: 411 ---MLVMEMAGGGPLHKFLV-GKREEIPVSNVAELLHQVSMGMKYL 452
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 2e-06
Identities = 34/133 (25%), Positives = 51/133 (38%), Gaps = 33/133 (24%)
Query: 374 VYKGTMKGGPE------IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYC 427
V++ G +AV L KEE + ++ FQRE A +A ++ N KLLG C
Sbjct: 63 VFQARAPGLLPYEPFTMVAVKML--KEEA-SADMQADFQREAALMAEFDNPNIVKLLGVC 119
Query: 428 RESSPFTRMLVFDYASNGTLYEHL----------------------HYGERCQVSWTRRM 465
P L+F+Y + G L E L +S ++
Sbjct: 120 AVGKPM--CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQL 177
Query: 466 KIVIGIARGLKYL 478
I +A G+ YL
Sbjct: 178 CIARQVAAGMAYL 190
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 2e-06
Identities = 19/96 (19%), Positives = 33/96 (34%), Gaps = 9/96 (9%)
Query: 87 APELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVK 146
A + +EL L G I +I L + +D N++ ++ L +
Sbjct: 12 AAQYTNAVRDRELDLRGYK-IPVIENLGATLDQFDAIDFSDNEIR-----KLDGFPLLRR 65
Query: 147 ---INLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
+ + +N + L L EL L N L
Sbjct: 66 LKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV 101
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 5e-06
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 9/88 (10%)
Query: 96 LQELILHGN-NLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVK---INLQS 151
++EL+L + G I L+ L L L + NL L K + L
Sbjct: 26 VRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLI-----SVSNLPKLPKLKKLELSE 80
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQ 179
N + G L L +L L+L N+L+
Sbjct: 81 NRIFGGLDMLAEKLPNLTHLNLSGNKLK 108
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 6e-06
Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 11/100 (11%)
Query: 86 LAPELGLLTY--LQELILHGN-NLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNL- 141
+ EL T ++EL+L + + G + + L+ L LT I NL
Sbjct: 7 IHLELRNRTPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLT-----SIANLP 61
Query: 142 --TGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
L K+ L N ++G L +L L+L N+++
Sbjct: 62 KLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIK 101
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 1e-05
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 406 QREVADLARINHENTGKLLGYCRESSPFTRM--LVFDYASNGTLYEHLHYGERCQVSWTR 463
QRE NH N +L+ YC L+ + GTL+ + + T
Sbjct: 74 QREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTE 133
Query: 464 R--MKIVIGIARGLKYLH 479
+ +++GI RGL+ +H
Sbjct: 134 DQILWLLLGICRGLEAIH 151
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 2e-05
Identities = 12/85 (14%), Positives = 31/85 (36%), Gaps = 10/85 (11%)
Query: 406 QREVADLARINHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRR 464
+ E+ + I +E G + + ++++Y N ++ + Y ++T
Sbjct: 91 KNELQIITDIKNEYCLTCEGII-TNY--DEVYIIYEYMENDSILKFDEYFFVLDKNYTCF 147
Query: 465 M------KIVIGIARGLKYLHTELG 483
+ I+ + Y+H E
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNEKN 172
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 3e-05
Identities = 27/123 (21%), Positives = 43/123 (34%), Gaps = 23/123 (18%)
Query: 374 VYKGTMKGGPE---IAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRE 429
V K +K A+ + KE + F E+ L ++ +H N LLG C
Sbjct: 41 VLKARIKKDGLRMDAAIKRM--KEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEH 97
Query: 430 SSPFTRMLVFDYASNGTLYEHL--------------HYGERCQVSWTRRMKIVIGIARGL 475
L +YA +G L + L +S + + +ARG+
Sbjct: 98 RGYL--YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGM 155
Query: 476 KYL 478
YL
Sbjct: 156 DYL 158
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 44.2 bits (103), Expect = 7e-05
Identities = 16/108 (14%), Positives = 35/108 (32%), Gaps = 13/108 (12%)
Query: 76 NISGSSLKGFLAPEL--GLLTYLQELILHGNNLIGIIPKELG---LLKRLKILDLGTNQL 130
+ P L+ L + ++ + +L +L+ +D+ L
Sbjct: 232 DYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVL 291
Query: 131 TG----PIPPEIGNLTGLVKINLQSNGLTG----RLPAELGNLISLEE 170
T + + + L IN++ N L+ L L I + +
Sbjct: 292 TDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSLPMKIDVSD 339
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 43.4 bits (101), Expect = 1e-04
Identities = 22/175 (12%), Positives = 49/175 (28%), Gaps = 30/175 (17%)
Query: 64 ACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILH-------GNNLIGIIPKEL-- 114
+ L+I G L L++L+L+ + + +
Sbjct: 189 KKPRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSK 248
Query: 115 GLLKRLKILDLGTNQLTGPIPPEIGN---LTGLVKINLQSNGLTGR----LPAELGNLIS 167
LK L + + + L L +++ + LT L + +
Sbjct: 249 DRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKH 308
Query: 168 LEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNF 222
L+ +++ N L +L +S + D Y++
Sbjct: 309 LKFINMKYNYLSDE--------------MKKELQKSLPMKIDVSDSQEYDDDYSY 349
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 2e-04
Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 13/87 (14%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVF--DYASNGTLYEHL----HYGERCQ 458
F+ E L + H N + + + +V + ++GTL +L +
Sbjct: 72 FKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVL 131
Query: 459 VSWTRRMKIVIGIARGLKYLHTELGPP 485
SW R+ I +GL++LHT PP
Sbjct: 132 RSWCRQ------ILKGLQFLHTR-TPP 151
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 521 | |||
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 99.98 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 99.98 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 99.98 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 99.97 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 99.97 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 99.97 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 99.97 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 99.97 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 99.97 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 99.97 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 99.96 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 99.95 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 99.95 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 99.95 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 99.95 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 99.95 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 99.95 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 99.94 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 99.94 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.94 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 99.94 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 99.94 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 99.94 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 99.94 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 99.94 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 99.93 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 99.93 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 99.93 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 99.93 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 99.93 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 99.93 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 99.93 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 99.93 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 99.93 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 99.93 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 99.93 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 99.93 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 99.93 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 99.93 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 99.93 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 99.93 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 99.93 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 99.93 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 99.93 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 99.93 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 99.93 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 99.93 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 99.93 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 99.93 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 99.93 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 99.93 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 99.93 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 99.93 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 99.93 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 99.93 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 99.93 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 99.93 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.93 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 99.93 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 99.92 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 99.92 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 99.92 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 99.92 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 99.92 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 99.92 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 99.92 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 99.92 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 99.92 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 99.92 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 99.92 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.92 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 99.92 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 99.92 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 99.92 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 99.92 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 99.92 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 99.92 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 99.92 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 99.92 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 99.92 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 99.92 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 99.92 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 99.92 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 99.92 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 99.92 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 99.92 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 99.92 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 99.92 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 99.92 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 99.92 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 99.92 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 99.92 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.92 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 99.92 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 99.92 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 99.92 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 99.92 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 99.92 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 99.92 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 99.92 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 99.92 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 99.92 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 99.92 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 99.92 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 99.92 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 99.92 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 99.92 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 99.92 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 99.92 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 99.92 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 99.92 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 99.92 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 99.92 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 99.92 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 99.92 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 99.92 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 99.92 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 99.92 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 99.92 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 99.92 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 99.92 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 99.91 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 99.91 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 99.91 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 99.91 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 99.91 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 99.91 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 99.91 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 99.91 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 99.91 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 99.91 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 99.91 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 99.91 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 99.91 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 99.91 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 99.91 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 99.91 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 99.91 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 99.91 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 99.91 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 99.91 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 99.91 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 99.91 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 99.91 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 99.91 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 99.91 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 99.91 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 99.91 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 99.91 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 99.91 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 99.91 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 99.91 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 99.91 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 99.91 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 99.91 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 99.91 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 99.91 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 99.91 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 99.91 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 99.91 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 99.91 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 99.91 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 99.91 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 99.91 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 99.91 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 99.91 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 99.91 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 99.91 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 99.91 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 99.91 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 99.91 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 99.91 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 99.91 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 99.91 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 99.91 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 99.91 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 99.91 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 99.91 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 99.91 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 99.91 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 99.91 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 99.91 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 99.91 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 99.91 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 99.9 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 99.9 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 99.9 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 99.9 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 99.9 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 99.9 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 99.9 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 99.9 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 99.9 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 99.9 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 99.9 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 99.9 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 99.9 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 99.9 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 99.9 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 99.9 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 99.9 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 99.9 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 99.9 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.9 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 99.9 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 99.9 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 99.9 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 99.9 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 99.9 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 99.9 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 99.9 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 99.9 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 99.9 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.89 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 99.89 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 99.89 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 99.89 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 99.89 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 99.89 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 99.89 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 99.89 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 99.89 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 99.89 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 99.89 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 99.89 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 99.89 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 99.89 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 99.89 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 99.89 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 99.89 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.89 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 99.89 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 99.88 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 99.88 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 99.88 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 99.88 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 99.88 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 99.88 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 99.88 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 99.88 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 99.88 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 99.88 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.88 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 99.87 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.87 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 99.87 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 99.87 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.87 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 99.87 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 99.87 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 99.87 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 99.87 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 99.86 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 99.86 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.86 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 99.86 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.85 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.84 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.84 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.84 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.84 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 99.83 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.83 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.83 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.83 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.82 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.82 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.82 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.82 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.82 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.82 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 99.82 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.81 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.81 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.81 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.81 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.81 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 99.8 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.8 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 99.8 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.8 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 99.8 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.8 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.8 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.8 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.8 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.8 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 99.8 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 99.79 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.79 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.79 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.79 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 99.79 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.79 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 99.78 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.78 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 99.77 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 99.77 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 99.77 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 99.77 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 99.77 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.77 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 99.77 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.77 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 99.77 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.77 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 99.76 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.76 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 99.76 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.76 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 99.76 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.76 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 99.76 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.75 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.75 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.75 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 99.74 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.74 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 99.74 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.74 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.74 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.74 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.73 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.73 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.72 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.72 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 99.71 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.71 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.7 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 99.7 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.7 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.7 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.69 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 99.69 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.69 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 99.69 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.69 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 99.69 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.68 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.68 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 99.68 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.68 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 99.68 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 99.67 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 99.66 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.66 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 99.66 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.65 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.65 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 99.65 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.65 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.64 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.64 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.64 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.64 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 99.63 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 99.63 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.63 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.62 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.62 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.62 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.62 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.61 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.61 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.6 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.59 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.59 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.59 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.59 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.59 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.59 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.58 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.58 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.57 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.53 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.52 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.51 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.51 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.51 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.51 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.5 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.4 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.39 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.35 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.34 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.24 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.18 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 99.16 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 99.14 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 99.09 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 99.0 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.87 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 98.85 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 98.81 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 98.79 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.72 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 98.63 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.61 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.54 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.54 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.53 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.53 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.5 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 98.5 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 98.48 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.4 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 98.37 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.37 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 98.37 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 98.22 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 98.2 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 97.91 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 97.83 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 97.81 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.66 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.65 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 97.53 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.42 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 97.16 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 97.15 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 97.13 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 97.12 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 97.08 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 97.08 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 97.03 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 96.96 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 96.92 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 96.85 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 96.85 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 96.71 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 96.58 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 96.47 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 96.46 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 96.4 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 96.37 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 96.34 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 96.32 | |
| 3f2s_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 94.16 | |
| 3mes_A | 424 | Choline kinase; malaria, structural genomics, stru | 93.91 | |
| 3g15_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 91.93 | |
| 4ann_A | 215 | ESSB; membrane protein, membrane secretion, ESS ty | 86.74 | |
| 4ano_A | 219 | ESSB; membrane protein, membrane secretion, ESS ty | 84.24 | |
| 3cxl_A | 463 | N-chimerin; SH2, RHO-GAP, structural genomics cons | 81.94 | |
| 2ks1_B | 44 | Epidermal growth factor receptor; ERBB1, ERBB2, tr | 81.51 |
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-36 Score=294.05 Aligned_cols=152 Identities=26% Similarity=0.343 Sum_probs=130.9
Q ss_pred HHhhhhchhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCC
Q 009965 358 ACEDFSNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431 (521)
Q Consensus 358 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~ 431 (521)
.+..|.+.||+|+||+||+|++. +++.||||++.... .....++|.+|+.++++++|||||+++|+|.+++
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~---~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~ 102 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA---EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQ 102 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C---CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc---ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECC
Confidence 34456689999999999999873 45789999985432 2234578999999999999999999999998876
Q ss_pred CCceEEEEecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCee
Q 009965 432 PFTRMLVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVY 497 (521)
Q Consensus 432 ~~~~~lv~ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiL 497 (521)
..+||||||++|+|.++|+.+. ...++|.++++|+.|||+||+|||+. +||||||||+|||
T Consensus 103 --~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NIL 177 (308)
T 4gt4_A 103 --PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVL 177 (308)
T ss_dssp --SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred --EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceE
Confidence 7899999999999999996432 23589999999999999999999998 9999999999999
Q ss_pred ecCCCCeeeCCCchhhhccc
Q 009965 498 LTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 498 ld~~~~~kl~DfGla~~~~~ 517 (521)
+|+++.+||+|||+|+.+..
T Consensus 178 l~~~~~~Ki~DFGlar~~~~ 197 (308)
T 4gt4_A 178 VYDKLNVKISDLGLFREVYA 197 (308)
T ss_dssp ECGGGCEEECCSCCBCGGGG
T ss_pred ECCCCCEEECCcccceeccC
Confidence 99999999999999997643
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=284.70 Aligned_cols=146 Identities=23% Similarity=0.330 Sum_probs=127.3
Q ss_pred hchhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceE
Q 009965 363 SNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
.+.||+|+||+||+|++. ++..||||++... .....++|.+|++++++++|||||+++|+|.+.+ ..+
T Consensus 18 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~----~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~--~~~ 91 (299)
T 4asz_A 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA----SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD--PLI 91 (299)
T ss_dssp EEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--SEE
T ss_pred eeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC----ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC--EEE
Confidence 478999999999999874 3678999998432 2345678999999999999999999999999877 799
Q ss_pred EEEecCCCCChhhhhccC-----------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCee
Q 009965 437 LVFDYASNGTLYEHLHYG-----------ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPK 505 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~k 505 (521)
||||||++|+|.++|+.. ....++|.++.+|+.|||+||+|||+. +||||||||+|||+|+++.+|
T Consensus 92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~K 168 (299)
T 4asz_A 92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVK 168 (299)
T ss_dssp EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEE
Confidence 999999999999999743 234699999999999999999999998 999999999999999999999
Q ss_pred eCCCchhhhccc
Q 009965 506 VSPLCLSFLLVS 517 (521)
Q Consensus 506 l~DfGla~~~~~ 517 (521)
|+|||+|+....
T Consensus 169 i~DFGla~~~~~ 180 (299)
T 4asz_A 169 IGDFGMSRDVYS 180 (299)
T ss_dssp ECCCSCHHHHTG
T ss_pred ECCcccceecCC
Confidence 999999997654
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-34 Score=286.08 Aligned_cols=145 Identities=19% Similarity=0.283 Sum_probs=123.9
Q ss_pred hchhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceE
Q 009965 363 SNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
.+.||+|+||+||+|+++ ++..||||++... .....++|.+|+++|++++|||||+++|+|.+.+ ..+
T Consensus 46 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~----~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~--~~~ 119 (329)
T 4aoj_A 46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA----SESARQDFQREAELLTMLQHQHIVRFFGVCTEGR--PLL 119 (329)
T ss_dssp EEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC----SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--SEE
T ss_pred EEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC----CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEE
Confidence 378999999999999875 3678999998432 2345678999999999999999999999999877 799
Q ss_pred EEEecCCCCChhhhhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCC
Q 009965 437 LVFDYASNGTLYEHLHYGE-------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~ 503 (521)
||||||++|+|.++++... ..+++|.++++|+.|||+||+|||+. +||||||||+|||+|+++.
T Consensus 120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~ 196 (329)
T 4aoj_A 120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLV 196 (329)
T ss_dssp EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCc
Confidence 9999999999999997432 24699999999999999999999998 9999999999999999999
Q ss_pred eeeCCCchhhhcc
Q 009965 504 PKVSPLCLSFLLV 516 (521)
Q Consensus 504 ~kl~DfGla~~~~ 516 (521)
+||+|||+|+.+.
T Consensus 197 ~Ki~DFGla~~~~ 209 (329)
T 4aoj_A 197 VKIGDFGMSRDIY 209 (329)
T ss_dssp EEECCCC------
T ss_pred EEEcccccceecc
Confidence 9999999999764
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-34 Score=280.53 Aligned_cols=143 Identities=28% Similarity=0.420 Sum_probs=124.9
Q ss_pred hchhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
.+.||+|+||+||+|++++ .||||.+.... ......++|.+|+.++++++|||||+++|+|.++ ..+||||||
T Consensus 41 ~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~--~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~---~~~iVmEy~ 113 (307)
T 3omv_A 41 STRIGSGSFGTVYKGKWHG--DVAVKILKVVD--PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD---NLAIVTQWC 113 (307)
T ss_dssp EEECCCCSSSEEEEEESSS--EEEEEECCCSS--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS---SCEEEEECC
T ss_pred eeEEeeCCCcEEEEEEECC--cEEEEEEEecC--CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECC---eEEEEEEcC
Confidence 4789999999999998865 59999885332 2334567899999999999999999999998654 579999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.++|+... ..++|.++.+|+.|||+||+|||+. +||||||||+|||+|+++.+||+|||+|+...
T Consensus 114 ~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 183 (307)
T 3omv_A 114 EGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS 183 (307)
T ss_dssp SSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC--
T ss_pred CCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecc
Confidence 9999999997433 3599999999999999999999998 99999999999999999999999999998764
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=281.18 Aligned_cols=147 Identities=19% Similarity=0.248 Sum_probs=126.5
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +|+.||||++..... .....+.|.+|+.++++++|||||++++++.+.+ ..|||||||
T Consensus 30 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~--~~yiVmEy~ 105 (350)
T 4b9d_A 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRM--SSKEREESRREVAVLANMKHPNIVQYRESFEENG--SLYIVMDYC 105 (350)
T ss_dssp EEC------CEEEEEETTTCCEEEEEEEECTTS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEehHHC--CHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECC--EEEEEEeCC
Confidence 78999999999999986 789999999854332 2344678999999999999999999999999877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++..+....+++.+...|+.||+.||+|||+. +||||||||+||||++++.+||+|||+|+.+.+
T Consensus 106 ~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 177 (350)
T 4b9d_A 106 EGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177 (350)
T ss_dssp TTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred CCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence 999999999765555689999999999999999999999 999999999999999999999999999997754
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-33 Score=269.49 Aligned_cols=151 Identities=25% Similarity=0.264 Sum_probs=127.8
Q ss_pred hhchhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecC--CCCceEEE
Q 009965 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES--SPFTRMLV 438 (521)
Q Consensus 362 ~~~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~~~lv 438 (521)
|.+.||+|+||+||+|+.. ++..||+|++..... .....+.|.+|++++++++|||||+++++|.+. .....+||
T Consensus 30 ~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv 107 (290)
T 3fpq_A 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL--TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence 3467999999999999986 688999999854332 233457899999999999999999999998652 11257999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeec-CCCCeeeCCCchhhhccc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT-EDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld-~~~~~kl~DfGla~~~~~ 517 (521)
||||++|+|.++++... .+++..+..|+.||+.||+|||+. .++||||||||+|||++ +++.+||+|||+|+....
T Consensus 108 mEy~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp EECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred EeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 99999999999997433 589999999999999999999987 23499999999999998 479999999999997654
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=99.98 E-value=7.5e-33 Score=271.53 Aligned_cols=145 Identities=21% Similarity=0.201 Sum_probs=129.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +++.||||.+..... ......+.+.+|++++++++|||||++++++.+.+ ..|+||||+
T Consensus 38 ~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~-~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~~yivmEy~ 114 (311)
T 4aw0_A 38 KILGEGSFSTVVLARELATSREYAIKILEKRHI-IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE--KLYFGLSYA 114 (311)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEecccCeEEEEEEECCCCCEEEEEEEEHHHC-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEEEEecC
Confidence 89999999999999986 789999999854321 12233567999999999999999999999999877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.... .+++.+...|+.||+.||+|||+. +|+||||||+|||+++++.+||+|||+|+.+.
T Consensus 115 ~gG~L~~~i~~~~--~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~ 183 (311)
T 4aw0_A 115 KNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS 183 (311)
T ss_dssp TTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred CCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecC
Confidence 9999999997443 499999999999999999999999 99999999999999999999999999999874
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=8.2e-33 Score=272.96 Aligned_cols=146 Identities=23% Similarity=0.314 Sum_probs=122.4
Q ss_pred hchhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC--CceEEEEe
Q 009965 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP--FTRMLVFD 440 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~--~~~~lv~e 440 (521)
.+.||+|+||+||+|++ +|+.||||++.... .....+..|+..+.+++|||||+++|+|.+++. ...+||||
T Consensus 8 ~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~-----~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E 81 (303)
T 3hmm_A 8 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE-----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp EEEEEECSSSEEEEEEE-TTEEEEEEEECGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred EEEEeeCCCeEEEEEEE-CCEEEEEEEECccc-----hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence 37899999999999998 57899999984321 112233456666778999999999999986542 14799999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL-----GPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
||++|+|.++++.. +++|.++.+|+.|+|+||+|||+.+ .++||||||||+|||+|+++++||+|||+|+..
T Consensus 82 y~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 82 YHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp CCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred CCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 99999999999743 4899999999999999999999863 569999999999999999999999999999876
Q ss_pred cc
Q 009965 516 VS 517 (521)
Q Consensus 516 ~~ 517 (521)
..
T Consensus 159 ~~ 160 (303)
T 3hmm_A 159 DS 160 (303)
T ss_dssp ET
T ss_pred cC
Confidence 54
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.5e-32 Score=273.46 Aligned_cols=142 Identities=17% Similarity=0.254 Sum_probs=128.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +|+.||||++...... ..+.+.+|+.+|++++|||||++++++.+.+ ..|||||||
T Consensus 80 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~----~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~--~~~ivmEy~ 153 (346)
T 4fih_A 80 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ----RRELLFNEVVIMRDYQHENVVEMYNSYLVGD--ELWVVMEFL 153 (346)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS----SGGGGHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEECCC
T ss_pred EEeecCcCeEEEEEEECCCCCEEEEEEEecCchh----HHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEEeCC
Confidence 67999999999999986 7899999998544322 2345889999999999999999999999887 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++... .+++.+...|+.||+.||+|||+. +||||||||+||||++++.+||+|||+|+.+..
T Consensus 154 ~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 222 (346)
T 4fih_A 154 EGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 222 (346)
T ss_dssp TTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred CCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCC
Confidence 999999999643 489999999999999999999999 999999999999999999999999999997753
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.4e-32 Score=265.51 Aligned_cols=152 Identities=17% Similarity=0.235 Sum_probs=124.1
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC----
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP---- 432 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~---- 432 (521)
++|. +.||+|+||+||+|+.. +|+.||||++.... .....+.+.+|+.++++++|||||++++++.+.+.
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~ 81 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN---RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKL 81 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS---SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-----
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccc
Confidence 3454 78999999999999986 78999999985433 22345679999999999999999999999875431
Q ss_pred ------CceEEEEecCCCCChhhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCee
Q 009965 433 ------FTRMLVFDYASNGTLYEHLHYGER-CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPK 505 (521)
Q Consensus 433 ------~~~~lv~ey~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~k 505 (521)
...|+||||+++|+|.+++..+.. ...++..+..|+.||++||+|||+. +|+||||||+|||++.++.+|
T Consensus 82 ~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vK 158 (299)
T 4g31_A 82 QPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVK 158 (299)
T ss_dssp -----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEE
T ss_pred cccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEE
Confidence 136899999999999999975432 3467788899999999999999999 999999999999999999999
Q ss_pred eCCCchhhhccc
Q 009965 506 VSPLCLSFLLVS 517 (521)
Q Consensus 506 l~DfGla~~~~~ 517 (521)
|+|||+|+.+..
T Consensus 159 l~DFGla~~~~~ 170 (299)
T 4g31_A 159 VGDFGLVTAMDQ 170 (299)
T ss_dssp ECCCCCC-----
T ss_pred EccCccceecCC
Confidence 999999998754
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-32 Score=269.93 Aligned_cols=138 Identities=18% Similarity=0.167 Sum_probs=123.2
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
++||+|+||+||+|+.. +|+.||||++..+.. +.+|+.++++++|||||++++++.+.+ ..|||||||
T Consensus 64 ~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~---------~~~E~~il~~l~HpnIV~l~~~~~~~~--~~~ivmEy~ 132 (336)
T 4g3f_A 64 PRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF---------RVEELVACAGLSSPRIVPLYGAVREGP--WVNIFMELL 132 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---------CTHHHHTTTTCCCTTBCCEEEEEEETT--EEEEEECCC
T ss_pred cEeccCCCeEEEEEEECCCCCEEEEEEECHHHh---------HHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEEecc
Confidence 67999999999999986 689999999853221 246999999999999999999999877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCC-CeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-SPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~-~~kl~DfGla~~~~~ 517 (521)
++|+|.++++... .+++.+...|+.||+.||+|||+. +||||||||+|||++.++ .+||+|||+|+.+.+
T Consensus 133 ~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~ 203 (336)
T 4g3f_A 133 EGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQP 203 (336)
T ss_dssp TTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC--
T ss_pred CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccC
Confidence 9999999997443 599999999999999999999999 999999999999999988 699999999997653
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.6e-32 Score=274.49 Aligned_cols=142 Identities=17% Similarity=0.254 Sum_probs=128.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +|+.||||++...... ..+.+.+|+.+|++++|||||++++++.+.+ ..|||||||
T Consensus 157 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~----~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~--~~~iVmEy~ 230 (423)
T 4fie_A 157 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ----RRELLFNEVVIMRDYQHENVVEMYNSYLVGD--ELWVVMEFL 230 (423)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS----SGGGHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred eEeccCcCcEEEEEEECCCCCEEEEEEEeccchh----HHHHHHHHHHHHHhCCCCCCCceEEEEEECC--EEEEEEeCC
Confidence 78999999999999986 7899999998644322 2345889999999999999999999999887 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.++++.. .+++.++..|+.||+.||+|||+. +||||||||+||||+.++.+||+|||+|+.+..
T Consensus 231 ~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~ 299 (423)
T 4fie_A 231 EGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 299 (423)
T ss_dssp TTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCS
T ss_pred CCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCC
Confidence 999999999643 389999999999999999999999 999999999999999999999999999997654
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=259.46 Aligned_cols=145 Identities=17% Similarity=0.262 Sum_probs=120.9
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +|+.||||++...... .....+.+.+|++++++++|||||++++++.+.+ ..|+||||+
T Consensus 19 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~--~~~ivmEy~ 95 (275)
T 3hyh_A 19 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLA-KSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD--EIIMVIEYA 95 (275)
T ss_dssp EEEEC---CCEEEEECTTTCCEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcC-CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC--EEEEEEeCC
Confidence 78999999999999986 7899999998543321 2234567999999999999999999999999877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
+|+|.+++..+. .+++.+...++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+|+...+
T Consensus 96 -~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 164 (275)
T 3hyh_A 96 -GNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp -CEEHHHHHHHSC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred -CCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence 579999997543 599999999999999999999999 999999999999999999999999999987654
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-31 Score=264.96 Aligned_cols=219 Identities=29% Similarity=0.516 Sum_probs=191.8
Q ss_pred CchhHHHHHHHHHHhcccCCCCCCCCCCCCCCCCCC--ccceeeCCCC--CCEEEEEecCCCCCc--cCCccccCCCCCC
Q 009965 24 FATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCH--WTGIACSDAR--DRVLKINISGSSLKG--FLAPELGLLTYLQ 97 (521)
Q Consensus 24 ~~~~~~~~L~~~k~~~~~~~~~~l~~W~~~~~~~c~--w~gv~C~~~~--~~l~~L~L~~n~l~~--~~p~~l~~l~~L~ 97 (521)
|.++|..||++||+++. ||. .+.+|+. +.+||. |.||+|+... ++|+.|+|++|.+++ .+|+.+..+++|+
T Consensus 3 c~~~~~~aL~~~k~~~~-~~~-~l~~W~~-~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~ 79 (313)
T 1ogq_A 3 CNPQDKQALLQIKKDLG-NPT-TLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLN 79 (313)
T ss_dssp SCHHHHHHHHHHHHHTT-CCG-GGTTCCT-TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCS
T ss_pred CCHHHHHHHHHHHHhcC-Ccc-cccCCCC-CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCC
Confidence 67899999999999995 665 6899975 468998 9999998543 799999999999999 8999999999999
Q ss_pred EEECcC-CcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecccccCcccCchhhhCCCCCCEEeCCCC
Q 009965 98 ELILHG-NNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRN 176 (521)
Q Consensus 98 ~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 176 (521)
+|+|++ |++.+.+|..|+.+++|++|+|++|++++.+|..|.++++|++|+|++|.+++.+|..|..+++|++|+|++|
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 999995 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCCCcccccccccccccCCcCc-----ccCCCCCCEEeccCCccccCCcccc---ccCCCcccCCCcCCCC
Q 009965 177 RLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCL---EYLPSTSFQGNCLQNK 247 (521)
Q Consensus 177 ~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~-----~~~l~~L~~L~ls~N~l~g~ip~~l---~~l~~l~~~~N~l~~~ 247 (521)
+++|.+|..... +...+..+++++|.+++ +..++ |+.|++++|.+++.+|..+ .+|+.+++++|.+...
T Consensus 160 ~l~~~~p~~l~~-l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 236 (313)
T 1ogq_A 160 RISGAIPDSYGS-FSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFD 236 (313)
T ss_dssp CCEEECCGGGGC-CCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCB
T ss_pred cccCcCCHHHhh-hhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeee
Confidence 999999875433 22367888899988864 34455 9999999999998888765 4556678888877653
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.6e-32 Score=269.75 Aligned_cols=159 Identities=18% Similarity=0.229 Sum_probs=130.7
Q ss_pred CHHHHHHHHhhhh--chhCcCCCeeEEEEEeCC------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCC-CCcc
Q 009965 351 SRQELEVACEDFS--NIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINH-ENTG 421 (521)
Q Consensus 351 ~~~~l~~~~~~~~--~~ig~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H-~niv 421 (521)
+.++++...++|. +.||+|+||+||+|++.+ ++.||||++.... .....++|.+|+++|.+++| ||||
T Consensus 55 ~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~---~~~~~~~~~~E~~il~~l~hhpnIV 131 (353)
T 4ase_A 55 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVV 131 (353)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred CCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc---ChHHHHHHHHHHHHHHHcCCCCcEE
Confidence 3344444445554 889999999999998753 3579999884322 22345679999999999965 9999
Q ss_pred ceeeEEecCCCCceEEEEecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeE
Q 009965 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFT 487 (521)
Q Consensus 422 ~l~g~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iv 487 (521)
+++|+|...+. ..+||||||++|+|.++|+... ...++|.+++.|+.|||+||+|||+. +||
T Consensus 132 ~l~g~~~~~~~-~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~ii 207 (353)
T 4ase_A 132 NLLGACTKPGG-PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCI 207 (353)
T ss_dssp CEEEEECCTTS-CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCC
T ss_pred EEEEEEEecCC-EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---Cee
Confidence 99999976431 5799999999999999997421 23589999999999999999999999 999
Q ss_pred ecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 488 ISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 488 H~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
||||||+|||+++++.+||+|||+|+.+.
T Consensus 208 HRDLK~~NILl~~~~~vKi~DFGlar~~~ 236 (353)
T 4ase_A 208 HRDLAARNILLSEKNVVKICDFGLARDIY 236 (353)
T ss_dssp CSCCSGGGEEECGGGCEEECCCGGGSCTT
T ss_pred cCccCccceeeCCCCCEEECcchhhhhcc
Confidence 99999999999999999999999999764
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.9e-32 Score=265.05 Aligned_cols=144 Identities=17% Similarity=0.117 Sum_probs=120.6
Q ss_pred chhCcCCCeeEEEEEeC----CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||+||+|+.. +++.||||.+...... .....++.+|++++++++|||||++++++.+++ ..|+||
T Consensus 30 ~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~~~ivm 105 (304)
T 3ubd_A 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLK--VRDRVRTKMERDILVEVNHPFIVKLHYAFQTEG--KLYLIL 105 (304)
T ss_dssp EEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEE--EEECC------CCCCCCCCTTEECEEEEEEETT--EEEEEE
T ss_pred EEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcC--hHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC--EEEEEE
Confidence 88999999999999863 4678999998543321 112336889999999999999999999999877 899999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
||+++|+|.+++.... .+++.+...|+.||+.||+|||+. +|+||||||+|||+++++.+||+|||+|+...
T Consensus 106 Ey~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 177 (304)
T 3ubd_A 106 DFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESI 177 (304)
T ss_dssp CCCTTCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC--
T ss_pred EcCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceecc
Confidence 9999999999997543 489999999999999999999999 99999999999999999999999999998653
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-29 Score=255.47 Aligned_cols=145 Identities=18% Similarity=0.224 Sum_probs=125.2
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCC----CCceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----PFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~~~~lv 438 (521)
+.||+|+||+||+|+.. +|+.||||++..... .....+.+.+|+++|++++|||||++++++.... ....|||
T Consensus 60 ~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~--~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~iv 137 (398)
T 4b99_A 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD--VVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVV 137 (398)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEETTTTS--SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEE
T ss_pred EEEecccCeEEEEEEECCCCCEEEEEEECcccc--chHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEE
Confidence 78999999999999986 799999999843322 2234567899999999999999999999986432 1268999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
||||+ |+|.+++... ..+++.++..|+.||+.||+|||+. +||||||||+|||++.++.+||+|||+|+.+.
T Consensus 138 mE~~~-g~L~~~i~~~--~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~ 209 (398)
T 4b99_A 138 LDLME-SDLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLC 209 (398)
T ss_dssp EECCS-EEHHHHHTSS--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred EeCCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeeecc
Confidence 99996 6899999643 3599999999999999999999999 99999999999999999999999999998764
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-28 Score=262.33 Aligned_cols=150 Identities=19% Similarity=0.116 Sum_probs=126.7
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHH---HHHHHHHhccCCCCccceeeEEecCCCC
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYF---QREVADLARINHENTGKLLGYCRESSPF 433 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~---~~E~~~l~~l~H~niv~l~g~~~~~~~~ 433 (521)
++|. ++||+|+||+||+|+.. +|+.||||++...... .......+ ..++.++..++|||||++++++.+.+
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~-~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~-- 265 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK-MKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD-- 265 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS--
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcc-hhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECC--
Confidence 4454 78999999999999987 6899999998543211 11112223 34466777889999999999999887
Q ss_pred ceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhh
Q 009965 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSF 513 (521)
Q Consensus 434 ~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~ 513 (521)
..|+||||+++|+|.++|.... .+++.....|+.||+.||+|||+. +||||||||+|||||++|.+||+|||+|+
T Consensus 266 ~lylVmEy~~GGdL~~~l~~~~--~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~ 340 (689)
T 3v5w_A 266 KLSFILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLAC 340 (689)
T ss_dssp EEEEEECCCCSCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceee
Confidence 8999999999999999997543 489999999999999999999999 99999999999999999999999999998
Q ss_pred hccc
Q 009965 514 LLVS 517 (521)
Q Consensus 514 ~~~~ 517 (521)
.+..
T Consensus 341 ~~~~ 344 (689)
T 3v5w_A 341 DFSK 344 (689)
T ss_dssp ECSS
T ss_pred ecCC
Confidence 7654
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-28 Score=272.00 Aligned_cols=215 Identities=25% Similarity=0.369 Sum_probs=169.1
Q ss_pred CCchhHHHHHHHHHHhcccCCCCCCCCCCCCCCCCCCccceeeCCCCCCEEEEEecCCCCCcc---CC------------
Q 009965 23 AFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGF---LA------------ 87 (521)
Q Consensus 23 ~~~~~~~~~L~~~k~~~~~~~~~~l~~W~~~~~~~c~w~gv~C~~~~~~l~~L~L~~n~l~~~---~p------------ 87 (521)
++.++|+.||++||+++. ||. .+++|+. +.+||.|.||+|+ .++|+.|+|+++.+.|. +|
T Consensus 8 ~~~~~~~~all~~k~~~~-~~~-~l~~W~~-~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l 82 (768)
T 3rgz_A 8 QSLYREIHQLISFKDVLP-DKN-LLPDWSS-NKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESL 82 (768)
T ss_dssp CCHHHHHHHHHHHHTTCS-CTT-SSTTCCT-TSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEE
T ss_pred cCCHHHHHHHHHHHhhCC-Ccc-cccCCCC-CCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCccccc
Confidence 356789999999999996 777 8999974 5689999999998 68999999999999886 44
Q ss_pred -----------ccccCCCCCCEEECcCCcccccCCc--cccCCCCCcEEEccCCcCCCCCCccc-CCCccCceeeccccc
Q 009965 88 -----------PELGLLTYLQELILHGNNLIGIIPK--ELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQSNG 153 (521)
Q Consensus 88 -----------~~l~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~~L~Ls~N~ 153 (521)
+.++.+++|++|+|++|.++|.+|. .++++++|++|+|++|.+++.+|..+ .++++|++|+|++|+
T Consensus 83 ~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 162 (768)
T 3rgz_A 83 FLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANS 162 (768)
T ss_dssp ECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSC
T ss_pred CCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCc
Confidence 4677888999999999999988888 88999999999999999988888776 788899999999999
Q ss_pred CcccCchh---hhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCc----ccCCCCCCEEeccCCccccC
Q 009965 154 LTGRLPAE---LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG----LCHLSQLKVADFSYNFFVGS 226 (521)
Q Consensus 154 l~g~~p~~---~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~----~~~l~~L~~L~ls~N~l~g~ 226 (521)
+++..|.. +.++++|++|++++|.+++.+|... ..++..+++++|.+++ +..+++|++|++++|++++.
T Consensus 163 l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~----l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~ 238 (768)
T 3rgz_A 163 ISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSR----CVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGD 238 (768)
T ss_dssp CEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTT----CTTCCEEECCSSCCCSCCCBCTTCCSCCEEECCSSCCCSC
T ss_pred cCCcCChhhhhhccCCCCCEEECCCCcccccCCccc----CCcCCEEECcCCcCCCCCcccccCCCCCEEECcCCcCCCc
Confidence 98888877 6788888888888888877666422 2356667777776654 34566777777777777766
Q ss_pred Cccccc---cCCCcccCCCcCCC
Q 009965 227 IPKCLE---YLPSTSFQGNCLQN 246 (521)
Q Consensus 227 ip~~l~---~l~~l~~~~N~l~~ 246 (521)
+|..+. +|+.+++++|.+.+
T Consensus 239 ~~~~l~~l~~L~~L~Ls~n~l~~ 261 (768)
T 3rgz_A 239 FSRAISTCTELKLLNISSNQFVG 261 (768)
T ss_dssp HHHHTTTCSSCCEEECCSSCCEE
T ss_pred ccHHHhcCCCCCEEECCCCcccC
Confidence 665543 34455666665543
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-28 Score=247.63 Aligned_cols=142 Identities=15% Similarity=0.178 Sum_probs=123.7
Q ss_pred hhhh--chhCcCCCeeEEEEEeC----CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCC
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSP 432 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~ 432 (521)
+.|. +.||+|+||+||+|+.+ +++.||+|++.... ...++.+|++++..+ +|||||++++++.+.+
T Consensus 21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~------~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~- 93 (361)
T 4f9c_A 21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS------HPIRIAAELQCLTVAGGQDNVMGVKYCFRKND- 93 (361)
T ss_dssp GTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS------CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETT-
T ss_pred CcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc------CHHHHHHHHHHHHHhcCCCCCceEEEEEEECC-
Confidence 4454 78999999999999863 36789999874321 234678999999998 6999999999998877
Q ss_pred CceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCC-CCeeeCCCch
Q 009965 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED-FSPKVSPLCL 511 (521)
Q Consensus 433 ~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~-~~~kl~DfGl 511 (521)
..++||||+++|+|.+++. .+++.+...++.|++.||+|||+. +|+||||||+|||++.+ +.+||+|||+
T Consensus 94 -~~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGl 164 (361)
T 4f9c_A 94 -HVVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGL 164 (361)
T ss_dssp -EEEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred -EEEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCC
Confidence 8999999999999999984 389999999999999999999999 99999999999999876 7999999999
Q ss_pred hhhccc
Q 009965 512 SFLLVS 517 (521)
Q Consensus 512 a~~~~~ 517 (521)
|+...+
T Consensus 165 a~~~~~ 170 (361)
T 4f9c_A 165 AQGTHD 170 (361)
T ss_dssp CEECTT
T ss_pred CcccCC
Confidence 986543
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-27 Score=255.14 Aligned_cols=148 Identities=14% Similarity=0.250 Sum_probs=129.9
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceE
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
++|. +.||+|+||+||+|+.+ +|+.||+|++.... ....+.+.+|+.+|+.++|||||++++++.+.+ ..+
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~----~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~--~~~ 230 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH----ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN--EMV 230 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSS--EEE
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc----hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--EEE
Confidence 3454 78999999999999986 78999999985432 223467899999999999999999999999877 899
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCC--CCeeeCCCchhhh
Q 009965 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED--FSPKVSPLCLSFL 514 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~--~~~kl~DfGla~~ 514 (521)
||||||++|+|.+++..+ ...+++.+...|+.||+.||+|||+. +|+||||||+|||++.+ +.+||+|||+|+.
T Consensus 231 iv~E~~~gg~L~~~i~~~-~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~ 306 (573)
T 3uto_A 231 MIYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAH 306 (573)
T ss_dssp EEEECCCCCBHHHHHTCT-TSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEE
T ss_pred EEEeecCCCcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeE
Confidence 999999999999999633 23599999999999999999999999 99999999999999854 8999999999998
Q ss_pred ccc
Q 009965 515 LVS 517 (521)
Q Consensus 515 ~~~ 517 (521)
+.+
T Consensus 307 ~~~ 309 (573)
T 3uto_A 307 LDP 309 (573)
T ss_dssp CCT
T ss_pred ccC
Confidence 754
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.6e-28 Score=262.29 Aligned_cols=217 Identities=21% Similarity=0.343 Sum_probs=183.4
Q ss_pred hhHHHHHHHHHHhcccCCCCC-------CCCCCCCCCCCCCc---cceeeCCCCCCEEEEEecCCCCCccCCccccCCCC
Q 009965 26 TNEFWALTTFKEAIYEDPHLV-------LSNWNALDADPCHW---TGIACSDARDRVLKINISGSSLKGFLAPELGLLTY 95 (521)
Q Consensus 26 ~~~~~~L~~~k~~~~~~~~~~-------l~~W~~~~~~~c~w---~gv~C~~~~~~l~~L~L~~n~l~~~~p~~l~~l~~ 95 (521)
..|+.||.++++++..+.+.. ..+|+. +.++|.| .||+|+. .++|+.|+|++++++|.+|++++.|++
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~-~~~~c~w~~~~GV~C~~-~~~V~~L~L~~~~l~g~lp~~l~~L~~ 106 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNF-NKELDMWGAQPGVSLNS-NGRVTGLSLEGFGASGRVPDAIGQLTE 106 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCC-SSCGGGTTCCTTEEECT-TCCEEEEECTTSCCEEEECGGGGGCTT
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCC-CCCcccccCCCCeEEcC-CCCEEEEEecCcccCCcCChHHhcCcc
Confidence 368999999999986443321 347986 4789999 9999986 489999999999999999999999999
Q ss_pred CCEEECcCC-----------------------------------------------------------------------
Q 009965 96 LQELILHGN----------------------------------------------------------------------- 104 (521)
Q Consensus 96 L~~L~L~~N----------------------------------------------------------------------- 104 (521)
|++|+|++|
T Consensus 107 L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l 186 (636)
T 4eco_A 107 LEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDT 186 (636)
T ss_dssp CCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTT
T ss_pred ceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhh
Confidence 999999998
Q ss_pred -------cccccCCccccCCCCCcEEEccCCcCCCC-----------------CCcccC--CCccCceeecccccCcccC
Q 009965 105 -------NLIGIIPKELGLLKRLKILDLGTNQLTGP-----------------IPPEIG--NLTGLVKINLQSNGLTGRL 158 (521)
Q Consensus 105 -------~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~-----------------~p~~~~--~l~~L~~L~Ls~N~l~g~~ 158 (521)
+++| +|.+|+++++|++|+|++|+++|. +|..++ ++++|++|+|++|+++|.+
T Consensus 187 ~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~ 265 (636)
T 4eco_A 187 QIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKL 265 (636)
T ss_dssp TTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSC
T ss_pred hhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccC
Confidence 4445 889999999999999999999986 999999 9999999999999999999
Q ss_pred chhhhCCCCCCEEeCCCCC-CCc-cCCCCCCC----cccccccccccccCCcCcc------cCCCCCCEEeccCCccccC
Q 009965 159 PAELGNLISLEELHLDRNR-LQG-AVPAGSNS----GYTANIHGMYASSANLTGL------CHLSQLKVADFSYNFFVGS 226 (521)
Q Consensus 159 p~~~~~l~~L~~L~Ls~N~-l~g-~~p~~~~~----~~~~~l~~l~l~~n~l~~~------~~l~~L~~L~ls~N~l~g~ 226 (521)
|..|+++++|++|+|++|+ ++| .+|..... ....++..+++++|.++.+ ..+++|+.|++++|+++|.
T Consensus 266 p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l~~L~~L~L~~N~l~g~ 345 (636)
T 4eco_A 266 PTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGK 345 (636)
T ss_dssp CTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTCTTCCEEECCSCCCEEE
T ss_pred hHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhhccCCCCCEEeCcCCcCccc
Confidence 9999999999999999998 998 78864322 0124678888888887643 4578899999999999988
Q ss_pred Ccccc---ccCCCcccCCCcCCC
Q 009965 227 IPKCL---EYLPSTSFQGNCLQN 246 (521)
Q Consensus 227 ip~~l---~~l~~l~~~~N~l~~ 246 (521)
+| .+ .+|+.+++++|.+..
T Consensus 346 ip-~~~~l~~L~~L~L~~N~l~~ 367 (636)
T 4eco_A 346 LP-AFGSEIKLASLNLAYNQITE 367 (636)
T ss_dssp CC-CCEEEEEESEEECCSSEEEE
T ss_pred hh-hhCCCCCCCEEECCCCcccc
Confidence 88 54 456677888887663
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-27 Score=238.91 Aligned_cols=166 Identities=34% Similarity=0.560 Sum_probs=144.8
Q ss_pred cccccCHHHHHHHHhhhh--chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccce
Q 009965 346 DVVRFSRQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKL 423 (521)
Q Consensus 346 ~~~~~~~~~l~~~~~~~~--~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l 423 (521)
....|++.++....++|. +.||+|+||.||+|+..+++.||||++...... .....+.+|++++.+++||||+++
T Consensus 16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~ 92 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQ---GGELQFQTEVEMISMAVHRNLLRL 92 (326)
T ss_dssp CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC--------CCCHHHHHHHGGGTCCCTTBCCC
T ss_pred ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCc---hHHHHHHHHHHHHHhccCCCccce
Confidence 456788999999999987 899999999999999888999999998543221 122368999999999999999999
Q ss_pred eeEEecCCCCceEEEEecCCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCC
Q 009965 424 LGYCRESSPFTRMLVFDYASNGTLYEHLHYGE--RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED 501 (521)
Q Consensus 424 ~g~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~ 501 (521)
++++.... ..++||||+++|+|.++++... ..+++|..+..|+.|++.||+|||+.+.++|+||||||+|||++++
T Consensus 93 ~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~ 170 (326)
T 3uim_A 93 RGFCMTPT--ERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEE 170 (326)
T ss_dssp CEEECCSS--CCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTT
T ss_pred EEEEecCC--ceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCC
Confidence 99998876 7899999999999999997543 3459999999999999999999999888899999999999999999
Q ss_pred CCeeeCCCchhhhcc
Q 009965 502 FSPKVSPLCLSFLLV 516 (521)
Q Consensus 502 ~~~kl~DfGla~~~~ 516 (521)
+.+||+|||+++.+.
T Consensus 171 ~~~kl~Dfg~~~~~~ 185 (326)
T 3uim_A 171 FEAVVGDFGLAKLMD 185 (326)
T ss_dssp CCEEECCCSSCEECC
T ss_pred CCEEeccCccccccC
Confidence 999999999998764
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-26 Score=229.27 Aligned_cols=164 Identities=30% Similarity=0.455 Sum_probs=143.5
Q ss_pred ccccCHHHHHHHHhhhh--------chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCC
Q 009965 347 VVRFSRQELEVACEDFS--------NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHE 418 (521)
Q Consensus 347 ~~~~~~~~l~~~~~~~~--------~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~ 418 (521)
...|++.++..++++|. +.||+|+||.||+|+. +++.||||++............+.+.+|+.++.+++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 46789999999999996 4699999999999987 57889999985443323334567899999999999999
Q ss_pred CccceeeEEecCCCCceEEEEecCCCCChhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCee
Q 009965 419 NTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYG-ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVY 497 (521)
Q Consensus 419 niv~l~g~~~~~~~~~~~lv~ey~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiL 497 (521)
||+++++++.+.+ ..++||||+++|+|.+++... ...+++|..+..|+.|+++||+|||+. +|+||||||+||+
T Consensus 91 ~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil 165 (307)
T 2nru_A 91 NLVELLGFSSDGD--DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANIL 165 (307)
T ss_dssp TBCCEEEEECSSS--SCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred CeEEEEEEEecCC--ceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEE
Confidence 9999999998876 789999999999999998633 234689999999999999999999999 9999999999999
Q ss_pred ecCCCCeeeCCCchhhhcc
Q 009965 498 LTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 498 ld~~~~~kl~DfGla~~~~ 516 (521)
+++++.+||+|||+++...
T Consensus 166 i~~~~~~kl~Dfg~~~~~~ 184 (307)
T 2nru_A 166 LDEAFTAKISDFGLARASE 184 (307)
T ss_dssp ECTTCCEEECCCTTCEECC
T ss_pred EcCCCcEEEeecccccccc
Confidence 9999999999999988654
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.94 E-value=2e-27 Score=264.16 Aligned_cols=213 Identities=22% Similarity=0.311 Sum_probs=177.4
Q ss_pred chhHHHHHHHHHHhcccCCCCCCCCCCCCC----CCC--CCc------------cceeeCCCCCCEEEEEecCCCCCccC
Q 009965 25 ATNEFWALTTFKEAIYEDPHLVLSNWNALD----ADP--CHW------------TGIACSDARDRVLKINISGSSLKGFL 86 (521)
Q Consensus 25 ~~~~~~~L~~~k~~~~~~~~~~l~~W~~~~----~~~--c~w------------~gv~C~~~~~~l~~L~L~~n~l~~~~ 86 (521)
...|+.||++||+++. +| +|+..+ .+| |.| .||+|+. .++|+.|+|++|+++|.+
T Consensus 267 ~~~d~~ALl~~k~~l~-~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~G~i 339 (876)
T 4ecn_A 267 YIKDYKALKAIWEALD-GK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAKGRV 339 (876)
T ss_dssp HHHHHHHHHHHHHHTT-GG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCEEEE
T ss_pred chHHHHHHHHHHHHcC-CC-----CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCCCcC
Confidence 3578999999999995 44 686543 456 999 9999986 689999999999999999
Q ss_pred CccccCCCCCCEEEC-cCCccccc--------------------------------------------------------
Q 009965 87 APELGLLTYLQELIL-HGNNLIGI-------------------------------------------------------- 109 (521)
Q Consensus 87 p~~l~~l~~L~~L~L-~~N~l~~~-------------------------------------------------------- 109 (521)
|++|++|++|++|+| ++|.++|.
T Consensus 340 p~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~ 419 (876)
T 4ecn_A 340 PDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKK 419 (876)
T ss_dssp CGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCC
T ss_pred chHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccc
Confidence 999999999999999 77766554
Q ss_pred --------------------CCccccCCCCCcEEEccCCcCCC-----------------CCCcccC--CCccCceeecc
Q 009965 110 --------------------IPKELGLLKRLKILDLGTNQLTG-----------------PIPPEIG--NLTGLVKINLQ 150 (521)
Q Consensus 110 --------------------~p~~~~~l~~L~~L~Ls~N~l~g-----------------~~p~~~~--~l~~L~~L~Ls 150 (521)
+|..|++|++|++|+|++|+|+| .+|..++ ++++|++|+|+
T Consensus 420 ~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls 499 (876)
T 4ecn_A 420 DSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELY 499 (876)
T ss_dssp CCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEE
T ss_pred ccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECc
Confidence 88899999999999999999998 3999988 99999999999
Q ss_pred cccCcccCchhhhCCCCCCEEeCCCCC-CCc-cCCCCCCC-----cccccccccccccCCcCcc------cCCCCCCEEe
Q 009965 151 SNGLTGRLPAELGNLISLEELHLDRNR-LQG-AVPAGSNS-----GYTANIHGMYASSANLTGL------CHLSQLKVAD 217 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g-~~p~~~~~-----~~~~~l~~l~l~~n~l~~~------~~l~~L~~L~ 217 (521)
+|++.+.+|..|+++++|++|+|++|+ ++| .+|..... ....++..+++++|.++.+ ..+++|+.|+
T Consensus 500 ~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~~~l~~L~~L~~L~ 579 (876)
T 4ecn_A 500 NCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLD 579 (876)
T ss_dssp SCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCHHHHTTCTTCCEEE
T ss_pred CCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCChhhhhcCCCCCEEE
Confidence 999999999999999999999999998 998 77753211 0123677788888877643 4577888888
Q ss_pred ccCCccccCCccccc---cCCCcccCCCcCCC
Q 009965 218 FSYNFFVGSIPKCLE---YLPSTSFQGNCLQN 246 (521)
Q Consensus 218 ls~N~l~g~ip~~l~---~l~~l~~~~N~l~~ 246 (521)
|++|+++ .+| .+. +|+.|++++|.+..
T Consensus 580 Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~~ 609 (876)
T 4ecn_A 580 CVHNKVR-HLE-AFGTNVKLTDLKLDYNQIEE 609 (876)
T ss_dssp CTTSCCC-BCC-CCCTTSEESEEECCSSCCSC
T ss_pred CCCCCcc-cch-hhcCCCcceEEECcCCcccc
Confidence 8888888 777 543 45667788887764
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-27 Score=239.39 Aligned_cols=220 Identities=18% Similarity=0.255 Sum_probs=185.6
Q ss_pred CCchhHHHHHHHHHHhcccCCCCCCCCCC---CCCCCCCCccceeeCC--------CCCCEEEEEecCCCCCccCCcccc
Q 009965 23 AFATNEFWALTTFKEAIYEDPHLVLSNWN---ALDADPCHWTGIACSD--------ARDRVLKINISGSSLKGFLAPELG 91 (521)
Q Consensus 23 ~~~~~~~~~L~~~k~~~~~~~~~~l~~W~---~~~~~~c~w~gv~C~~--------~~~~l~~L~L~~n~l~~~~p~~l~ 91 (521)
++..+|..||++||+.+..|+...+.+|. ....++|.|.|+.|.. ...+|+.|+|++|.++ .+|+.++
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~ 101 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAF 101 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGG
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhh
Confidence 36678999999999999778877778894 3456899999999951 2468999999999998 5888899
Q ss_pred CCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecccccCcccCchhhhC-------
Q 009965 92 LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGN------- 164 (521)
Q Consensus 92 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~------- 164 (521)
.+++|++|+|++|.++ .+|..++.+++|++|+|++|+++ .+|..++++++|++|+|++|++.+.+|..++.
T Consensus 102 ~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~ 179 (328)
T 4fcg_A 102 RLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEH 179 (328)
T ss_dssp GGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCE
T ss_pred hCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhh
Confidence 9999999999999999 89999999999999999999999 88999999999999999999999999988765
Q ss_pred --CCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc----cCCCCCCEEeccCCccccCCccccc---cCC
Q 009965 165 --LISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL----CHLSQLKVADFSYNFFVGSIPKCLE---YLP 235 (521)
Q Consensus 165 --l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~----~~l~~L~~L~ls~N~l~g~ip~~l~---~l~ 235 (521)
+++|++|+|++|+++ .+|..... ..++..+++++|.++++ ..+++|+.|++++|++.+.+|..+. +|+
T Consensus 180 ~~l~~L~~L~L~~n~l~-~lp~~l~~--l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~ 256 (328)
T 4fcg_A 180 QGLVNLQSLRLEWTGIR-SLPASIAN--LQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLK 256 (328)
T ss_dssp EESTTCCEEEEEEECCC-CCCGGGGG--CTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCC
T ss_pred ccCCCCCEEECcCCCcC-cchHhhcC--CCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCC
Confidence 999999999999998 77764322 34778888999988764 4578999999999999989987764 456
Q ss_pred CcccCCCcCCCCC
Q 009965 236 STSFQGNCLQNKD 248 (521)
Q Consensus 236 ~l~~~~N~l~~~~ 248 (521)
.+++++|.+.+..
T Consensus 257 ~L~L~~n~~~~~~ 269 (328)
T 4fcg_A 257 RLILKDCSNLLTL 269 (328)
T ss_dssp EEECTTCTTCCBC
T ss_pred EEECCCCCchhhc
Confidence 6788888665543
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.3e-26 Score=227.79 Aligned_cols=143 Identities=23% Similarity=0.315 Sum_probs=128.5
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. ++..||+|++... .....+.|.+|++++.+++||||+++++++.+.. ..++||||+
T Consensus 16 ~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~ 89 (310)
T 3s95_A 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRF----DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDK--RLNFITEYI 89 (310)
T ss_dssp EEEECCSSEEEEEEEETTTCCEEEEEEESCC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred ceecCCCCEEEEEEEECCCCcEEEEEEeccC----CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCC--eeEEEEEec
Confidence 78999999999999986 6889999987332 2345578999999999999999999999999877 799999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++... ...++|.++..|+.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 90 ~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 159 (310)
T 3s95_A 90 KGGTLRGIIKSM-DSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMV 159 (310)
T ss_dssp TTCBHHHHHHHC-CTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC
T ss_pred CCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecc
Confidence 999999999753 33589999999999999999999999 99999999999999999999999999998654
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.9e-27 Score=233.84 Aligned_cols=154 Identities=31% Similarity=0.544 Sum_probs=133.4
Q ss_pred HHHHHHhhhh--chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCC
Q 009965 354 ELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431 (521)
Q Consensus 354 ~l~~~~~~~~--~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~ 431 (521)
++...+++|. +.||+|+||.||+|+.++++.||||++.... ....+.+.+|+.++.+++||||+++++++...+
T Consensus 33 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES----SQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp CCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC----SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred HHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccC----hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 3444555665 7899999999999998889999999874432 223567999999999999999999999998776
Q ss_pred CCceEEEEecCCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCC
Q 009965 432 PFTRMLVFDYASNGTLYEHLHYGE--RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPL 509 (521)
Q Consensus 432 ~~~~~lv~ey~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~Df 509 (521)
..++||||+++|+|.+++.... ...++|.++.+++.|+++||+|||+. +|+||||||+||++++++.+||+||
T Consensus 109 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Df 183 (321)
T 2qkw_B 109 --EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDF 183 (321)
T ss_dssp --CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCC
T ss_pred --eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeec
Confidence 7899999999999999996443 23589999999999999999999998 9999999999999999999999999
Q ss_pred chhhhcc
Q 009965 510 CLSFLLV 516 (521)
Q Consensus 510 Gla~~~~ 516 (521)
|+++...
T Consensus 184 g~~~~~~ 190 (321)
T 2qkw_B 184 GISKKGT 190 (321)
T ss_dssp TTCEECS
T ss_pred ccccccc
Confidence 9997643
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-26 Score=228.92 Aligned_cols=158 Identities=15% Similarity=0.210 Sum_probs=137.5
Q ss_pred cccCHHHHHHHHhh----------hh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhc
Q 009965 348 VRFSRQELEVACED----------FS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLAR 414 (521)
Q Consensus 348 ~~~~~~~l~~~~~~----------~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~ 414 (521)
..++++++..+++. |. +.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|+.++.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~----~~~~~~~~E~~~l~~ 98 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ----QRRELLFNEVVIMRD 98 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CSHHHHHHHHHHHTT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch----hHHHHHHHHHHHHHh
Confidence 56888898888865 22 58999999999999987 789999999854322 234568999999999
Q ss_pred cCCCCccceeeEEecCCCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCC
Q 009965 415 INHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSS 494 (521)
Q Consensus 415 l~H~niv~l~g~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~ 494 (521)
++||||+++++++...+ ..++||||+++|+|.+++.. ..++|..+..++.|+++||+|||+. +|+||||||+
T Consensus 99 l~h~niv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~ 170 (321)
T 2c30_A 99 YQHFNVVEMYKSYLVGE--ELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSD 170 (321)
T ss_dssp CCCTTBCCEEEEEEETT--EEEEEECCCCSCBHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGG
T ss_pred CCCCCcceEEEEEEECC--EEEEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHH
Confidence 99999999999998877 89999999999999999853 2489999999999999999999998 9999999999
Q ss_pred CeeecCCCCeeeCCCchhhhccc
Q 009965 495 AVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 495 NiLld~~~~~kl~DfGla~~~~~ 517 (521)
|||++.++.+||+|||+++.+..
T Consensus 171 NIll~~~~~~kl~Dfg~~~~~~~ 193 (321)
T 2c30_A 171 SILLTLDGRVKLSDFGFCAQISK 193 (321)
T ss_dssp GEEECTTCCEEECCCTTCEECCS
T ss_pred HEEECCCCcEEEeeeeeeeeccc
Confidence 99999999999999999887643
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.7e-27 Score=243.24 Aligned_cols=159 Identities=14% Similarity=0.121 Sum_probs=134.5
Q ss_pred CHHHHHHHHhhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEE
Q 009965 351 SRQELEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYC 427 (521)
Q Consensus 351 ~~~~l~~~~~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~ 427 (521)
.+.++...+++|. ++||+|+||+||+|+.. +++.||+|++..... ......+.+.+|..++..++||||++++++|
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 143 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEM-LKRAETACFREERDVLVNGDSKWITTLHYAF 143 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHH-HHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHh-hhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 3445555566776 89999999999999997 578899999854221 1112233488999999999999999999999
Q ss_pred ecCCCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeC
Q 009965 428 RESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVS 507 (521)
Q Consensus 428 ~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~ 507 (521)
.+.+ ..++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||+|.++.+||+
T Consensus 144 ~~~~--~~~lV~Ey~~gg~L~~~l~~~-~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~ 217 (437)
T 4aw2_A 144 QDDN--NLYLVMDYYVGGDLLTLLSKF-EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLA 217 (437)
T ss_dssp ECSS--EEEEEECCCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred eeCC--EEEEEEecCCCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEc
Confidence 9877 899999999999999999742 23599999999999999999999999 99999999999999999999999
Q ss_pred CCchhhhcc
Q 009965 508 PLCLSFLLV 516 (521)
Q Consensus 508 DfGla~~~~ 516 (521)
|||+|+.+.
T Consensus 218 DFGla~~~~ 226 (437)
T 4aw2_A 218 DFGSCLKLM 226 (437)
T ss_dssp CCTTCEECC
T ss_pred chhhhhhcc
Confidence 999997654
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-26 Score=229.51 Aligned_cols=144 Identities=20% Similarity=0.226 Sum_probs=128.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +|+.||||++..... .....+++.+|+++++.++||||+++++++...+ ..++||||+
T Consensus 21 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--~~~lv~e~~ 96 (328)
T 3fe3_A 21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQL--NPTSLQKLFREVRIMKILNHPNIVKLFEVIETEK--TLYLIMEYA 96 (328)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--EEEEEEECC
Confidence 78999999999999985 789999999854322 2334567899999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 97 ~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 165 (328)
T 3fe3_A 97 SGGEVFDYLVAHG--RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFT 165 (328)
T ss_dssp TTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence 9999999996443 489999999999999999999999 99999999999999999999999999998654
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-26 Score=234.42 Aligned_cols=145 Identities=24% Similarity=0.342 Sum_probs=121.6
Q ss_pred chhCcCCCeeEEEEEeC----CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||.||+|+.. ++..||||.+.... .....++|.+|+.++.+++||||+++++++.... ..++||
T Consensus 51 ~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~ 125 (373)
T 2qol_A 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY---TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK--PVMIVT 125 (373)
T ss_dssp EEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--SCEEEE
T ss_pred eEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC--ceEEEE
Confidence 78999999999999875 46789999984321 2344568999999999999999999999998876 789999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
||+++|+|.++++.. ...+++.++..|+.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++.+..
T Consensus 126 e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 199 (373)
T 2qol_A 126 EYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLED 199 (373)
T ss_dssp ECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred eCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCcccccccc
Confidence 999999999999743 34589999999999999999999999 999999999999999999999999999987653
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.6e-26 Score=226.20 Aligned_cols=152 Identities=18% Similarity=0.255 Sum_probs=128.7
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC----
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP---- 432 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~---- 432 (521)
++|. +.||+|+||.||+|+.. +++.||||++.... .....+.+.+|+.++++++||||+++++++.+...
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 82 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN---RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ 82 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS---TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC---chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhh
Confidence 3454 78999999999999997 78999999985432 22345679999999999999999999999865431
Q ss_pred ---------------------------------------------------CceEEEEecCCCCChhhhhccCCC-CCCC
Q 009965 433 ---------------------------------------------------FTRMLVFDYASNGTLYEHLHYGER-CQVS 460 (521)
Q Consensus 433 ---------------------------------------------------~~~~lv~ey~~~gsL~~~l~~~~~-~~l~ 460 (521)
...++||||+++|+|.+++..... ...+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~ 162 (332)
T 3qd2_B 83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDRE 162 (332)
T ss_dssp HHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSC
T ss_pred hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchh
Confidence 127999999999999999975432 3467
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 461 WTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 461 ~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
+..+.+|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+..
T Consensus 163 ~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 216 (332)
T 3qd2_B 163 HGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQ 216 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSC
T ss_pred hHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCccccccc
Confidence 888999999999999999999 999999999999999999999999999987654
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-26 Score=238.52 Aligned_cols=155 Identities=16% Similarity=0.128 Sum_probs=131.4
Q ss_pred HHHHHHhhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecC
Q 009965 354 ELEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430 (521)
Q Consensus 354 ~l~~~~~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 430 (521)
++....++|. ++||+|+||+||+|+.. +++.||+|++..... ......+.+.+|+.++..++|||||++++++.+.
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~-~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEM-IKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhh-hhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 3333445565 78999999999999987 688999999854221 1111233588999999999999999999999987
Q ss_pred CCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCc
Q 009965 431 SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLC 510 (521)
Q Consensus 431 ~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfG 510 (521)
. ..++||||+++|+|.++++.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 142 ~--~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG 213 (410)
T 3v8s_A 142 R--YLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFG 213 (410)
T ss_dssp S--EEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred C--EEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccc
Confidence 7 899999999999999999643 389999999999999999999999 99999999999999999999999999
Q ss_pred hhhhccc
Q 009965 511 LSFLLVS 517 (521)
Q Consensus 511 la~~~~~ 517 (521)
+|+.+..
T Consensus 214 ~a~~~~~ 220 (410)
T 3v8s_A 214 TCMKMNK 220 (410)
T ss_dssp TCEECCT
T ss_pred eeEeecc
Confidence 9987643
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1e-26 Score=238.97 Aligned_cols=160 Identities=16% Similarity=0.108 Sum_probs=135.1
Q ss_pred CHHHHHHHHhhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEE
Q 009965 351 SRQELEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYC 427 (521)
Q Consensus 351 ~~~~l~~~~~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~ 427 (521)
.+++.....++|. ++||+|+||+||+++.. +++.||+|++..... ......+.+.+|..++..++||||+++++++
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~-~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDM-LKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-HHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHh-hhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 3444444556676 78999999999999996 789999999853221 1112234588999999999999999999999
Q ss_pred ecCCCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeC
Q 009965 428 RESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVS 507 (521)
Q Consensus 428 ~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~ 507 (521)
.+.+ ..++||||+++|+|.+++.... ..+++..+..++.+|+.||+|||+. +|+||||||+|||+|+++.+||+
T Consensus 131 ~~~~--~~~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~ 204 (412)
T 2vd5_A 131 QDEN--YLYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLA 204 (412)
T ss_dssp ECSS--EEEEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred eeCC--EEEEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEe
Confidence 9877 8999999999999999997432 3589999999999999999999998 99999999999999999999999
Q ss_pred CCchhhhccc
Q 009965 508 PLCLSFLLVS 517 (521)
Q Consensus 508 DfGla~~~~~ 517 (521)
|||+++.+..
T Consensus 205 DFGla~~~~~ 214 (412)
T 2vd5_A 205 DFGSCLKLRA 214 (412)
T ss_dssp CCTTCEECCT
T ss_pred echhheeccC
Confidence 9999987643
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.1e-26 Score=227.04 Aligned_cols=145 Identities=24% Similarity=0.350 Sum_probs=126.8
Q ss_pred chhCcCCCeeEEEEEeC-C---CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-G---GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~---~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||.||+|++. + +..||||.+... ......+.|.+|+.++.+++||||+++++++.+.+ ..++||
T Consensus 55 ~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~ 129 (325)
T 3kul_A 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAG---YTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR--LAMIVT 129 (325)
T ss_dssp EEEEETTTEEEEEEEECCTTSCCEEEEEEEECTT---CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGG--CCEEEE
T ss_pred eEEEeCCCcEEEEEEEecCCCCCceEEEEecCCC---CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--ccEEEe
Confidence 78999999999999985 2 345999998432 12344567999999999999999999999998776 789999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
||+++|+|.++++... ..+++.++..|+.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+..
T Consensus 130 e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 203 (325)
T 3kul_A 130 EYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED 203 (325)
T ss_dssp ECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC-
T ss_pred eCCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCccccccc
Confidence 9999999999996432 3599999999999999999999999 999999999999999999999999999987643
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=99.93 E-value=4.6e-26 Score=231.47 Aligned_cols=145 Identities=23% Similarity=0.251 Sum_probs=126.2
Q ss_pred chhCcCCCeeEEEEEeC--------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCc
Q 009965 364 NIIGSSPDSLVYKGTMK--------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFT 434 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~--------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 434 (521)
+.||+|+||.||+|+.. ++..||||++... ......+++.+|+.++.++ +||||++++++|.+.+ .
T Consensus 87 ~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~--~ 161 (370)
T 2psq_A 87 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD---ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG--P 161 (370)
T ss_dssp EEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT---CBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS--S
T ss_pred eEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC---cCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC--C
Confidence 78999999999999863 3457999998432 1233456799999999999 8999999999998876 7
Q ss_pred eEEEEecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC
Q 009965 435 RMLVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE 500 (521)
Q Consensus 435 ~~lv~ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~ 500 (521)
.++||||+++|+|.+++.... ...+++.++..++.||++||+|||+. +|+||||||+|||+++
T Consensus 162 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~ 238 (370)
T 2psq_A 162 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTE 238 (370)
T ss_dssp CEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECT
T ss_pred EEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEECC
Confidence 899999999999999997432 13589999999999999999999999 9999999999999999
Q ss_pred CCCeeeCCCchhhhcc
Q 009965 501 DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 501 ~~~~kl~DfGla~~~~ 516 (521)
++.+||+|||+++.+.
T Consensus 239 ~~~~kl~DFG~a~~~~ 254 (370)
T 2psq_A 239 NNVMKIADFGLARDIN 254 (370)
T ss_dssp TCCEEECCCSSCEETT
T ss_pred CCCEEEccccCCcccC
Confidence 9999999999998654
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=6.9e-26 Score=219.55 Aligned_cols=142 Identities=20% Similarity=0.288 Sum_probs=127.6
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|+..+++.||+|++..... ..+++.+|++++.+++||||+++++++.+.. ..++||||++
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~ 88 (269)
T 4hcu_A 16 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-----SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA--PICLVFEFME 88 (269)
T ss_dssp EEEEECSSCEEEEEEETTTEEEEEEEECTTSB-----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SEEEEEECCT
T ss_pred heecCCCccEEEEEEecCCCeEEEEEeccccc-----CHHHHHHHHHHHHhCCCCCEeeEEEEEecCC--ceEEEEEeCC
Confidence 78999999999999998888999999853221 2357899999999999999999999998876 7899999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 89 ~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 157 (269)
T 4hcu_A 89 HGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVL 157 (269)
T ss_dssp TCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBC
T ss_pred CCcHHHHHHhcC-cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccc
Confidence 999999996433 4589999999999999999999999 99999999999999999999999999998654
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.2e-26 Score=223.12 Aligned_cols=146 Identities=18% Similarity=0.221 Sum_probs=128.9
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. ++..||+|.+..... ......+.|.+|+.++.+++||||+++++++.+.+ ..++||||+
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~ 93 (294)
T 4eqm_A 17 DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPR-EKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDD--CYYLVMEYI 93 (294)
T ss_dssp EEEEEETTEEEEEEEETTTCSEEEEEEEECCSS-CCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSS--EEEEEEECC
T ss_pred EEEccCCCEEEEEEEECCCCCeEEEEEeccCcc-ccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCC--eEEEEEeCC
Confidence 78999999999999986 688999999854332 22344568999999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.... ++++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+..
T Consensus 94 ~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 163 (294)
T 4eqm_A 94 EGPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE 163 (294)
T ss_dssp CSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC--
T ss_pred CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcccccc
Confidence 9999999996443 589999999999999999999999 999999999999999999999999999987643
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=7.8e-26 Score=222.73 Aligned_cols=141 Identities=16% Similarity=0.214 Sum_probs=126.6
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +++.||+|++..... ...+.+.+|+.++.+++||||+++++++...+ ..++||||+
T Consensus 26 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~ 99 (297)
T 3fxz_A 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ----PKKELIINEILVMRENKNPNIVNYLDSYLVGD--ELWVVMEYL 99 (297)
T ss_dssp EEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC----SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred eeeccCCCeEEEEEEECCCCcEEEEEEeecccc----cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECC--EEEEEEECC
Confidence 78999999999999975 789999999854332 22456899999999999999999999998877 799999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++... .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 100 ~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (297)
T 3fxz_A 100 AGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167 (297)
T ss_dssp TTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred CCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecC
Confidence 999999999643 489999999999999999999999 99999999999999999999999999987654
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=99.93 E-value=3.2e-26 Score=241.57 Aligned_cols=144 Identities=24% Similarity=0.331 Sum_probs=129.5
Q ss_pred chhCcCCCeeEEEEEeCC-CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|++.. +..||||.+..... ..++|.+|+.++.+++|||||+++++|.... ..++||||+
T Consensus 226 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--~~~lv~E~~ 298 (495)
T 1opk_A 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--PFYIITEFM 298 (495)
T ss_dssp EESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCEEEEECC
T ss_pred eEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-----chHHHHHHHHHHHhcCCCCEeeEEEEEecCC--cEEEEEEcc
Confidence 789999999999999974 78999999843221 2467999999999999999999999998876 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.++++......+++..+..|+.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.+..
T Consensus 299 ~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 370 (495)
T 1opk_A 299 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTG 370 (495)
T ss_dssp TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTT
T ss_pred CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccC
Confidence 999999999865556699999999999999999999999 999999999999999999999999999987643
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.93 E-value=7.3e-26 Score=225.09 Aligned_cols=146 Identities=14% Similarity=0.155 Sum_probs=128.3
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. +|+.||+|.+...... .....+.+.+|+.++..++||||+++++++.+.. ..++||||+
T Consensus 12 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~--~~~lv~e~~ 88 (318)
T 1fot_A 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVV-RLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ--QIFMIMDYI 88 (318)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCC--EEEEEEeCC
Confidence 78999999999999986 7899999998543211 1123456889999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 89 ~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~ 158 (318)
T 1fot_A 89 EGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD 158 (318)
T ss_dssp CSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred CCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence 9999999997543 489999999999999999999998 999999999999999999999999999987654
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=99.93 E-value=4.1e-26 Score=238.30 Aligned_cols=143 Identities=14% Similarity=0.262 Sum_probs=127.3
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|+++++..||||++.... ...++|.+|+.++.+++|||||++++++.. . ..++||||++
T Consensus 194 ~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~-~--~~~lv~e~~~ 265 (454)
T 1qcf_A 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-----MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-E--PIYIITEFMA 265 (454)
T ss_dssp EEEECCSSEEEEEEEETTTEEEEEEEECTTS-----BCHHHHHHHHHHHTTCCCTTBCCEEEEECS-S--SCEEEECCCT
T ss_pred EEcccCCceEEEEEEECCccEEEEEEecCCC-----ccHHHHHHHHHHHhhCCCCCEeeEEEEEeC-C--ccEEEEeecC
Confidence 7899999999999999888899999985322 235679999999999999999999999874 3 5899999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
+|+|.++++......+++..+..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.+..
T Consensus 266 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~ 336 (454)
T 1qcf_A 266 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIED 336 (454)
T ss_dssp TCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCC
T ss_pred CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCC
Confidence 99999999754334589999999999999999999999 999999999999999999999999999997643
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=6.9e-26 Score=225.88 Aligned_cols=143 Identities=20% Similarity=0.275 Sum_probs=125.3
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||||++..+... ...+.+.+|+.++..++||||+++++++.+.+ ..++||||+
T Consensus 13 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv~e~~ 87 (323)
T 3tki_A 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYC 87 (323)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECC----------CHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEEccccc---chHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--eEEEEEEcC
Confidence 78999999999999987 7899999998544321 22356889999999999999999999999877 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++... ..+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 88 ~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 156 (323)
T 3tki_A 88 SGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (323)
T ss_dssp TTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred CCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceec
Confidence 999999999643 3589999999999999999999998 99999999999999999999999999998653
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=6.9e-26 Score=227.03 Aligned_cols=144 Identities=19% Similarity=0.113 Sum_probs=127.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +|+.||+|.+..... ......+.+.+|+.++..++||||+++++++.+.+ ..++||||+
T Consensus 11 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~--~~~lv~E~~ 87 (337)
T 1o6l_A 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVI-IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD--RLCFVMEYA 87 (337)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEeHHHh-hhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCC--EEEEEEeCC
Confidence 78999999999999987 689999999854321 11223457889999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 88 ~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 155 (337)
T 1o6l_A 88 NGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG 155 (337)
T ss_dssp TTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhc
Confidence 9999999996433 489999999999999999999999 9999999999999999999999999999863
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=7.8e-26 Score=224.03 Aligned_cols=146 Identities=28% Similarity=0.396 Sum_probs=122.9
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||+||+|+. +++.||||++..... .....++|.+|++++.+++||||+++++++.+.. ..++||||++
T Consensus 43 ~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~~ 117 (309)
T 3p86_A 43 EKIGAGSFGTVHRAEW-HGSDVAVKILMEQDF--HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP--NLSIVTEYLS 117 (309)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEECCCCC--SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT--CCEEEEECCT
T ss_pred eEeecCCCeEEEEEEE-CCCcEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--ceEEEEecCC
Confidence 7899999999999987 567899999854322 2334567999999999999999999999998876 7899999999
Q ss_pred CCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 444 NGTLYEHLHYGE-RCQVSWTRRMKIVIGIARGLKYLHTELGPP--FTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 444 ~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
+|+|.+++.... ...+++..+..++.|+++||+|||+. + |+||||||+|||+++++.+||+|||+++....
T Consensus 118 ~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~ 191 (309)
T 3p86_A 118 RGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS 191 (309)
T ss_dssp TCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC-------
T ss_pred CCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCccccc
Confidence 999999997543 23489999999999999999999998 7 99999999999999999999999999986543
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-26 Score=234.18 Aligned_cols=144 Identities=21% Similarity=0.280 Sum_probs=127.3
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|++. +++.||||.+... ......++|.+|++++.+++||||++++++|...+ ..++||||+
T Consensus 120 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e~~ 194 (377)
T 3cbl_A 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRET---LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ--PIYIVMELV 194 (377)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEECCTT---SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSS--SCEEEEECC
T ss_pred eEeccCCCCeEEEEEEecCCeEEEEEEcccc---CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCC--CcEEEEEcC
Confidence 78999999999999997 7899999987432 12233456899999999999999999999998776 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.++++.. ...+++.++..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++...
T Consensus 195 ~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~ 264 (377)
T 3cbl_A 195 QGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEA 264 (377)
T ss_dssp TTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECT
T ss_pred CCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecC
Confidence 999999999743 23589999999999999999999999 99999999999999999999999999998644
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-25 Score=218.83 Aligned_cols=142 Identities=20% Similarity=0.311 Sum_probs=124.6
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|+..++..||+|++..... ..+++.+|++++.+++||||+++++++.+.+ ..++||||++
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~ 102 (283)
T 3gen_A 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-----SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR--PIFIITEYMA 102 (283)
T ss_dssp EECC---CEEEEEEEETTTEEEEEEEECTTSB-----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SEEEEECCCT
T ss_pred hhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-----CHHHHHHHHHHHhcCCCCCEeeEEEEEecCC--CeEEEEeccC
Confidence 78999999999999999888999999853321 2357899999999999999999999998776 7899999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+|+|.+++... ...+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 103 ~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 171 (283)
T 3gen_A 103 NGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 171 (283)
T ss_dssp TCBHHHHHHCG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBC
T ss_pred CCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccc
Confidence 99999999642 23589999999999999999999999 99999999999999999999999999998654
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-25 Score=226.49 Aligned_cols=147 Identities=22% Similarity=0.262 Sum_probs=128.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeecccc--chhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEe
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW--TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
+.||+|+||.||+|+.. +|..||+|.+....... .....+.+.+|+.++.+++||||+++++++.+.. ..++|||
T Consensus 18 ~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~~~lv~e 95 (361)
T 2yab_A 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRT--DVVLILE 95 (361)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred eEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC--EEEEEEE
Confidence 78999999999999987 68999999986543211 1123567999999999999999999999998877 8999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCC----CeeeCCCchhhhcc
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF----SPKVSPLCLSFLLV 516 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~----~~kl~DfGla~~~~ 516 (521)
|+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+|||+++++ .+||+|||+++.+.
T Consensus 96 ~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~ 170 (361)
T 2yab_A 96 LVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170 (361)
T ss_dssp CCCSCBHHHHHTTC--SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECC
T ss_pred cCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcC
Confidence 99999999999643 3599999999999999999999999 999999999999998877 79999999998765
Q ss_pred c
Q 009965 517 S 517 (521)
Q Consensus 517 ~ 517 (521)
+
T Consensus 171 ~ 171 (361)
T 2yab_A 171 D 171 (361)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=9.6e-26 Score=229.60 Aligned_cols=145 Identities=13% Similarity=0.104 Sum_probs=128.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. +++.||+|.+..... ......+.+.+|+.++..++|||||++++++.+.. ..++||||+
T Consensus 21 ~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~-~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~--~~~lv~e~~ 97 (384)
T 4fr4_A 21 RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKC-VERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEE--DMFMVVDLL 97 (384)
T ss_dssp EEEECCTTCCEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEehhhc-ccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEEEEEecC
Confidence 78999999999999987 688999999854321 12223467899999999999999999999999877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 98 ~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 166 (384)
T 4fr4_A 98 LGGDLRYHLQQNV--HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP 166 (384)
T ss_dssp TTEEHHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeecc
Confidence 9999999997443 489999999999999999999999 99999999999999999999999999998764
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.5e-26 Score=228.22 Aligned_cols=148 Identities=18% Similarity=0.160 Sum_probs=128.5
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCce
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 435 (521)
++|. ++||+|+||+||+|+.. +++.||||++..... ......+.+.+|..++..+ +||||+++++++.+.+ ..
T Consensus 23 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~-~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~--~~ 99 (353)
T 3txo_A 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVI-LQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPD--RL 99 (353)
T ss_dssp CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-HHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EE
T ss_pred hheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHh-cchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCC--EE
Confidence 4454 78999999999999986 689999999854321 1223345688999999988 7999999999998877 89
Q ss_pred EEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 436 ~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
++||||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 100 ~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~ 174 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQKSR--RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 174 (353)
T ss_dssp EEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeec
Confidence 99999999999999996443 489999999999999999999999 9999999999999999999999999999853
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-25 Score=226.60 Aligned_cols=146 Identities=16% Similarity=0.119 Sum_probs=128.5
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. +|+.||+|.+..... ......+.+.+|+.++..++||||+++++++.+.. ..++||||+
T Consensus 47 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~ 123 (350)
T 1rdq_E 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 123 (350)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred EEeecCcCcEEEEEEECCCCCEEEEEEEEhHHh-ccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC--EEEEEEcCC
Confidence 78999999999999986 689999999854321 11223457889999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+..
T Consensus 124 ~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 124 AGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp TTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccC
Confidence 9999999997433 489999999999999999999999 999999999999999999999999999987654
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=8.8e-26 Score=225.51 Aligned_cols=145 Identities=16% Similarity=0.119 Sum_probs=118.6
Q ss_pred chhCcCCCeeEEEEEe----CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTM----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||.||+++. .+++.||+|++..............+.+|+.++.+++||||+++++++...+ ..++||
T Consensus 23 ~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~ 100 (327)
T 3a62_A 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG--KLYLIL 100 (327)
T ss_dssp EEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSS--CEEEEE
T ss_pred EEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC--EEEEEE
Confidence 7899999999999987 4688999999854322212233456889999999999999999999998877 799999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 101 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 101 EYLSGGELFMQLEREG--IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp ECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred eCCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 9999999999996433 489999999999999999999999 9999999999999999999999999998754
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=5.2e-26 Score=223.53 Aligned_cols=145 Identities=21% Similarity=0.299 Sum_probs=124.2
Q ss_pred chhCcCCCeeEEEEEe-----CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEE
Q 009965 364 NIIGSSPDSLVYKGTM-----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~-----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||+|++ .+++.||||++... .....+.|.+|++++.+++||||+++++++...+....++|
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 91 (295)
T 3ugc_A 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLI 91 (295)
T ss_dssp EEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC----CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEE
T ss_pred heeeccCCEEEEEEEEecccCCCCcEEEEEEcccC----CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEE
Confidence 7899999999999985 25789999998432 22345679999999999999999999999965432258999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 92 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 92 MEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 99999999999997443 3589999999999999999999998 99999999999999999999999999998764
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-25 Score=217.83 Aligned_cols=142 Identities=21% Similarity=0.325 Sum_probs=127.2
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|+.+++..||+|++..... ..+++.+|+.++.+++||||+++++++.+.. ..++||||++
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~ 86 (268)
T 3sxs_A 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-----SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEY--PIYIVTEYIS 86 (268)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECBTTB-----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SEEEEEECCT
T ss_pred eeeccCCCceEEEEEecCceeEEEEEeccCCC-----cHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--ceEEEEEccC
Confidence 78999999999999999888999999853321 2356899999999999999999999998776 7899999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+|+|.+++... ...+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 87 ~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 155 (268)
T 3sxs_A 87 NGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVL 155 (268)
T ss_dssp TCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECC
T ss_pred CCcHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecc
Confidence 99999999643 23589999999999999999999999 99999999999999999999999999998654
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-25 Score=222.78 Aligned_cols=143 Identities=12% Similarity=0.164 Sum_probs=126.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. ++..+|+|.+.... .....+.+|+.++..++||||+++++++.+.+ ..++||||+
T Consensus 11 ~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-----~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv~e~~ 83 (321)
T 1tki_A 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-----TDQVLVKKEISILNIARHRNILHLHESFESME--ELVMIFEFI 83 (321)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCCT-----HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETT--EEEEEECCC
T ss_pred eEEecCCCeEEEEEEECCCCcEEEEEEEecCc-----ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCC--EEEEEEEeC
Confidence 78999999999999987 67889999885322 23456889999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC--CCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE--DFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~--~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++... ...+++.++..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++.+.+
T Consensus 84 ~g~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~ 156 (321)
T 1tki_A 84 SGLDIFERINTS-AFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP 156 (321)
T ss_dssp CCCBHHHHHTSS-SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred CCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC
Confidence 999999999643 23589999999999999999999999 9999999999999987 78999999999987643
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.7e-25 Score=221.83 Aligned_cols=146 Identities=20% Similarity=0.240 Sum_probs=128.5
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeecccc--chhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEe
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW--TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
+.||+|+||.||+|+.. ++..||+|.+....... .....+.+.+|+.++.+++||||+++++++.+.. ..++|||
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e 94 (326)
T 2y0a_A 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--DVILILE 94 (326)
T ss_dssp EEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred eEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEEEEEE
Confidence 78999999999999987 68999999986543211 1123567999999999999999999999998876 8999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCC----CeeeCCCchhhhcc
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF----SPKVSPLCLSFLLV 516 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~----~~kl~DfGla~~~~ 516 (521)
|+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++ .+||+|||+++.+.
T Consensus 95 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~ 169 (326)
T 2y0a_A 95 LVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169 (326)
T ss_dssp CCCSCBHHHHHTTS--SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECC
T ss_pred cCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECC
Confidence 99999999999643 3589999999999999999999999 999999999999999887 89999999998764
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-25 Score=238.38 Aligned_cols=148 Identities=19% Similarity=0.135 Sum_probs=130.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
++||+|+||.||+|+.. +|+.||+|++..... ........+.+|+.++.+++|||||++++++.+.+ ..++||||+
T Consensus 190 ~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~-~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~--~l~lVmEy~ 266 (576)
T 2acx_A 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRI-KKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD--ALCLVLTLM 266 (576)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhh-hhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCC--EEEEEEEcC
Confidence 78999999999999986 789999999854321 11223456889999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.......+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.+..
T Consensus 267 ~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 267 NGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp CSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 999999999765555699999999999999999999999 999999999999999999999999999987643
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-25 Score=220.70 Aligned_cols=147 Identities=18% Similarity=0.176 Sum_probs=122.3
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeecccc----------------------chhhHHHHHHHHHHHhccCCCCc
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW----------------------TGYLELYFQREVADLARINHENT 420 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~----------------------~~~~~~~~~~E~~~l~~l~H~ni 420 (521)
+.||+|+||.||+|+.. +++.||||.+....... .....+.+.+|++++.+++||||
T Consensus 19 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 98 (298)
T 2zv2_A 19 DEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNV 98 (298)
T ss_dssp EEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTTB
T ss_pred eEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCCC
Confidence 78999999999999986 68899999985443110 01123468999999999999999
Q ss_pred cceeeEEecCCCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC
Q 009965 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE 500 (521)
Q Consensus 421 v~l~g~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~ 500 (521)
+++++++.+......++||||+++|+|.+++.. ..+++.++..++.|+++||+|||+. +|+||||||+|||++.
T Consensus 99 v~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~ 172 (298)
T 2zv2_A 99 VKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL---KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGE 172 (298)
T ss_dssp CCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECT
T ss_pred CeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECC
Confidence 999999987443478999999999999987642 3589999999999999999999999 9999999999999999
Q ss_pred CCCeeeCCCchhhhcc
Q 009965 501 DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 501 ~~~~kl~DfGla~~~~ 516 (521)
++.+||+|||+++.+.
T Consensus 173 ~~~~kl~Dfg~~~~~~ 188 (298)
T 2zv2_A 173 DGHIKIADFGVSNEFK 188 (298)
T ss_dssp TSCEEECCCTTCEECS
T ss_pred CCCEEEecCCCccccc
Confidence 9999999999998764
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-25 Score=225.17 Aligned_cols=144 Identities=17% Similarity=0.120 Sum_probs=127.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|+.. +++.||+|++..... ......+.+.+|..++.++ +||||+++++++.+.+ ..++||||
T Consensus 15 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~--~~~lv~e~ 91 (345)
T 3a8x_A 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELV-NDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES--RLFFVIEY 91 (345)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEGGGS-CSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEECC
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEhHHh-cchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCC--EEEEEEeC
Confidence 78999999999999987 688999999854322 1233456788999999988 8999999999998877 89999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 92 ~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~ 160 (345)
T 3a8x_A 92 VNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 160 (345)
T ss_dssp CCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccc
Confidence 99999999996433 489999999999999999999999 9999999999999999999999999999863
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-25 Score=220.87 Aligned_cols=144 Identities=17% Similarity=0.230 Sum_probs=125.4
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||+||+|+..+++.||+|++..... .....+.+.+|++++.+++||||+++++++.+.. ..++||||++
T Consensus 27 ~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~~ 102 (311)
T 3niz_A 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAE--DEGIPSTAIREISLLKELHHPNIVSLIDVIHSER--CLTLVFEFME 102 (311)
T ss_dssp EEEEECSSCEEEEEEETTSCEEEEEEEC--------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSS--CEEEEEECCS
T ss_pred hhccCCCCeEEEEEEECCCCEEEEEEEecccc--cchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCC--EEEEEEcCCC
Confidence 78999999999999998899999999854322 2234567899999999999999999999998776 7899999998
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+ +|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 103 ~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 170 (311)
T 3niz_A 103 K-DLKKVLDEN-KTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFG 170 (311)
T ss_dssp E-EHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETT
T ss_pred C-CHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecC
Confidence 5 888888643 34589999999999999999999999 99999999999999999999999999998764
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.93 E-value=1e-25 Score=230.21 Aligned_cols=143 Identities=17% Similarity=0.141 Sum_probs=124.6
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
++||+|+||+||+|+.. +++.||+|++...... .....+.+.+|..++.++ +|||||++++++.+.+ ..++||||
T Consensus 58 ~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~-~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~--~~~lV~E~ 134 (396)
T 4dc2_A 58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVN-DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES--RLFFVIEY 134 (396)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC-----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSS--EEEEEEEC
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhcc-CHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECC--EEEEEEEc
Confidence 78999999999999987 5788999998543221 122234578899999887 8999999999998877 89999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 135 ~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~ 202 (396)
T 4dc2_A 135 VNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 202 (396)
T ss_dssp CTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeee
Confidence 99999999996433 489999999999999999999999 999999999999999999999999999986
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-25 Score=221.60 Aligned_cols=148 Identities=17% Similarity=0.220 Sum_probs=127.9
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
++||+|+||+||+|+.. +++.||||++..... ....+.+.+|++++.+++||||+++++++........++||||+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~ 91 (319)
T 4euu_A 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISF---LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFC 91 (319)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECGGGG---GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECC
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEeccccc---cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCC
Confidence 78999999999999987 589999999853321 12345688999999999999999999999876544679999999
Q ss_pred CCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee----cCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGE-RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL----TEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLl----d~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.... ...+++.++..|+.|+++||+|||+. +|+||||||+|||+ +.++.+||+|||+++.+..
T Consensus 92 ~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~ 168 (319)
T 4euu_A 92 PCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (319)
T ss_dssp TTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCT
T ss_pred CCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCceecCC
Confidence 9999999997533 23489999999999999999999999 99999999999999 7888899999999987643
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.1e-25 Score=226.97 Aligned_cols=145 Identities=15% Similarity=0.152 Sum_probs=130.0
Q ss_pred chhCcC--CCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEe
Q 009965 364 NIIGSS--PDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~ig~G--~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
+.||+| +||.||+|+.. +++.||||++..... .....+.+.+|+.+++.++|||||++++++.+.+ ..++|||
T Consensus 31 ~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e 106 (389)
T 3gni_B 31 TVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC--SNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN--ELWVVTS 106 (389)
T ss_dssp EEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred ecccCCcCCceEEEEEEEcCCCCEEEEEEeccccc--ChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECC--EEEEEEE
Confidence 789999 99999999997 789999999854332 2344567889999999999999999999999877 8999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
|+++|+|.+++.......+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||.+..+
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 107 FMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp CCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred ccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 99999999999765545699999999999999999999999 9999999999999999999999999987654
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-25 Score=224.85 Aligned_cols=145 Identities=26% Similarity=0.351 Sum_probs=127.3
Q ss_pred chhCcCCCeeEEEEEeCC------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEE
Q 009965 364 NIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
+.||+|+||.||+|+..+ ++.||||.+.... .....+.|.+|+.++.+++||||+++++++.+.+ ..++
T Consensus 53 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~l 127 (343)
T 1luf_A 53 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA---SADMQADFQREAALMAEFDNPNIVKLLGVCAVGK--PMCL 127 (343)
T ss_dssp EEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SCEE
T ss_pred eeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc---CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC--ceEE
Confidence 789999999999999853 4789999984321 2334567999999999999999999999998876 7899
Q ss_pred EEecCCCCChhhhhccCC----------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCC
Q 009965 438 VFDYASNGTLYEHLHYGE----------------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSA 495 (521)
Q Consensus 438 v~ey~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~N 495 (521)
||||+++|+|.+++.... ...+++.++..|+.|+++||+|||+. +|+||||||+|
T Consensus 128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~N 204 (343)
T 1luf_A 128 LFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRN 204 (343)
T ss_dssp EEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred EEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcce
Confidence 999999999999997432 14689999999999999999999999 99999999999
Q ss_pred eeecCCCCeeeCCCchhhhcc
Q 009965 496 VYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 496 iLld~~~~~kl~DfGla~~~~ 516 (521)
||+++++.+||+|||+++.+.
T Consensus 205 Il~~~~~~~kl~Dfg~~~~~~ 225 (343)
T 1luf_A 205 CLVGENMVVKIADFGLSRNIY 225 (343)
T ss_dssp EEECGGGCEEECCCSCHHHHT
T ss_pred EEECCCCeEEEeecCCCcccc
Confidence 999999999999999998764
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=99.92 E-value=3.6e-25 Score=224.20 Aligned_cols=149 Identities=20% Similarity=0.244 Sum_probs=129.1
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceE
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
++|. +.||+|+||.||+|+.. ++..||+|.+..+.. .....+.+.+|+.++.+++||||+++++++.+.+ ..+
T Consensus 29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~ 104 (362)
T 2bdw_A 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIVRLHDSIQEES--FHY 104 (362)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEE
T ss_pred cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEE
Confidence 4454 78999999999999986 689999999854322 2334567899999999999999999999998877 889
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCC---CCeeeCCCchhh
Q 009965 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED---FSPKVSPLCLSF 513 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~---~~~kl~DfGla~ 513 (521)
+||||+++|+|.+++... ..+++..+..++.||++||+|||+. +|+||||||+|||++.+ +.+||+|||+++
T Consensus 105 lv~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~ 179 (362)
T 2bdw_A 105 LVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179 (362)
T ss_dssp EEECCCCSCBHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCB
T ss_pred EEEecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcce
Confidence 999999999999999643 3589999999999999999999999 99999999999999865 459999999998
Q ss_pred hccc
Q 009965 514 LLVS 517 (521)
Q Consensus 514 ~~~~ 517 (521)
.+.+
T Consensus 180 ~~~~ 183 (362)
T 2bdw_A 180 EVND 183 (362)
T ss_dssp CCTT
T ss_pred EecC
Confidence 7653
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=99.92 E-value=7.2e-26 Score=236.25 Aligned_cols=143 Identities=20% Similarity=0.291 Sum_probs=124.7
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|++.++..||||.+..... ..++|.+|+.++.+++||||+++++++.+ + ..++||||++
T Consensus 190 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~--~~~iv~e~~~ 261 (452)
T 1fmk_A 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E--PIYIVTEYMS 261 (452)
T ss_dssp EEEEECSSCEEEEEEETTTEEEEEEECCTTSS-----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S--SCEEEECCCT
T ss_pred eeecCCCCeEEEEEEECCCceEEEEEeccCCC-----CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-C--ceEEEehhhc
Confidence 78999999999999998888899999853221 24579999999999999999999999976 3 5899999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
+|+|.++++......+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+..
T Consensus 262 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 332 (452)
T 1fmk_A 262 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 332 (452)
T ss_dssp TCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence 99999999743334589999999999999999999999 999999999999999999999999999987643
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-25 Score=232.41 Aligned_cols=142 Identities=23% Similarity=0.311 Sum_probs=125.8
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|++. ++.||||.+.... ..++|.+|+.++.+++|||||++++++..... ..++||||++
T Consensus 199 ~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~iv~e~~~ 270 (450)
T 1k9a_A 199 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMA 270 (450)
T ss_dssp EEEEECSSEEEEEEEET-TEEEEEEEESSCT------TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTS-CEEEEEECCT
T ss_pred eeecCcCCeeEEEEEec-CCeEEEEEeCCch------HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCC-ceEEEEEecC
Confidence 78999999999999986 5789999984321 34579999999999999999999999876532 5899999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+|+|.++++......+++..+..++.||++||+|||+. +|+||||||+|||+++++.+||+|||+++...
T Consensus 271 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 340 (450)
T 1k9a_A 271 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 340 (450)
T ss_dssp TCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccc
Confidence 99999999865545589999999999999999999999 99999999999999999999999999998543
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=9.9e-26 Score=227.82 Aligned_cols=160 Identities=18% Similarity=0.218 Sum_probs=132.5
Q ss_pred cCHHHHHHHHhhhh--chhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCc
Q 009965 350 FSRQELEVACEDFS--NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENT 420 (521)
Q Consensus 350 ~~~~~l~~~~~~~~--~~ig~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~ni 420 (521)
+...+++...++|. +.||+|+||.||+|++. +++.||||++.... .....+.+.+|++++.++ +||||
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hpni 88 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNV 88 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTB
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC---CHHHHHHHHHHHHHHHhhcCCcce
Confidence 44455555556665 89999999999999842 45789999984321 223456799999999999 89999
Q ss_pred cceeeEEecCCCCceEEEEecCCCCChhhhhccCCC--------------------------------------------
Q 009965 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGER-------------------------------------------- 456 (521)
Q Consensus 421 v~l~g~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~-------------------------------------------- 456 (521)
++++++|.+.+. ..++||||+++|+|.++++....
T Consensus 89 v~~~~~~~~~~~-~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (359)
T 3vhe_A 89 VNLLGACTKPGG-PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGF 167 (359)
T ss_dssp CCEEEEECSTTS-CCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------
T ss_pred eeeeeeeecCCC-ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccc
Confidence 999999987542 48999999999999999974321
Q ss_pred --------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 457 --------------------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 457 --------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
..+++..+..|+.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 244 (359)
T 3vhe_A 168 VEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIY 244 (359)
T ss_dssp ----------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTT
T ss_pred ccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeec
Confidence 1289999999999999999999999 99999999999999999999999999998653
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-25 Score=224.50 Aligned_cols=149 Identities=17% Similarity=0.201 Sum_probs=127.2
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeecc-ccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEE-HWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~-~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|+.. +++.||||++..... .......+.+.+|+.++..++||||+++++++.+.+ ..++||||
T Consensus 30 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv~e~ 107 (351)
T 3c0i_A 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDG--MLYMVFEF 107 (351)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred eEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEEEEEeC
Confidence 88999999999999986 689999999854321 111123567999999999999999999999998877 89999999
Q ss_pred CCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCC---eeeCCCchhhhcc
Q 009965 442 ASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS---PKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~---~kl~DfGla~~~~ 516 (521)
+++|+|.+++... ....+++..+..++.|+++||+|||+. +|+||||||+|||++.++. +||+|||+++.+.
T Consensus 108 ~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~ 184 (351)
T 3c0i_A 108 MDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG 184 (351)
T ss_dssp CSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTTCEECC
T ss_pred CCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcceeEec
Confidence 9999999888532 233589999999999999999999999 9999999999999986654 9999999998765
Q ss_pred c
Q 009965 517 S 517 (521)
Q Consensus 517 ~ 517 (521)
.
T Consensus 185 ~ 185 (351)
T 3c0i_A 185 E 185 (351)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-25 Score=225.33 Aligned_cols=149 Identities=17% Similarity=0.192 Sum_probs=128.3
Q ss_pred Hhhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCc
Q 009965 359 CEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFT 434 (521)
Q Consensus 359 ~~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 434 (521)
.++|. +.||+|+||.||+|+.. +++.||+|.+...... .....+.+..|..++..+ +||||+++++++.+.+ .
T Consensus 16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~--~ 92 (345)
T 1xjd_A 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL-MDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE--N 92 (345)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--E
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhh-hhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC--E
Confidence 34554 88999999999999997 6889999998543211 112345678899999887 9999999999998877 8
Q ss_pred eEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 435 RMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 435 ~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
.++||||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~ 167 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKE 167 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhh
Confidence 999999999999999996433 489999999999999999999999 999999999999999999999999999986
Q ss_pred c
Q 009965 515 L 515 (521)
Q Consensus 515 ~ 515 (521)
.
T Consensus 168 ~ 168 (345)
T 1xjd_A 168 N 168 (345)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.4e-25 Score=226.33 Aligned_cols=144 Identities=15% Similarity=0.189 Sum_probs=121.9
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +|..||+|++.... ....+++.+|+.++.+++||||+++++++.+.+ ..++||||+
T Consensus 95 ~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv~E~~ 168 (373)
T 2x4f_A 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRG----MKDKEEVKNEISVMNQLDHANLIQLYDAFESKN--DIVLVMEYV 168 (373)
T ss_dssp EECC-----CEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred eEEecCcCEEEEEEEEcCCCcEEEEEEEcccc----cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--EEEEEEeCC
Confidence 67999999999999986 68999999985432 123567999999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee--cCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL--TEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLl--d~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+|||+ ++++.+||+|||+++.+.+
T Consensus 169 ~~~~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~ 241 (373)
T 2x4f_A 169 DGGELFDRIIDE-SYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKP 241 (373)
T ss_dssp TTCEEHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCT
T ss_pred CCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCC
Confidence 999999998643 23589999999999999999999999 99999999999999 5678999999999987653
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=99.92 E-value=3.9e-25 Score=216.95 Aligned_cols=144 Identities=15% Similarity=0.209 Sum_probs=125.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +++.||+|++..... .....+.+.+|+.++.+++||||+++++++.+.+ ..++||||+
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 83 (292)
T 3o0g_A 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD--DEGVPSSALREICLLKELKHKNIVRLHDVLHSDK--KLTLVFEFC 83 (292)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEESSCS--STTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred eEecCCCCeEEEEEEECCCCceEEEEeeeccCC--cCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCC--EEEEEEecC
Confidence 78999999999999986 688999999854432 2334567899999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++ ++.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 84 ~~-~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 152 (292)
T 3o0g_A 84 DQ-DLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFG 152 (292)
T ss_dssp SE-EHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred CC-CHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecC
Confidence 86 666666432 23599999999999999999999999 99999999999999999999999999998764
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.6e-25 Score=217.79 Aligned_cols=144 Identities=19% Similarity=0.251 Sum_probs=127.0
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|+..+++.||+|++..... .....+.+.+|+.++.+++||||+++++++.+.+ ..++||||++
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~~ 83 (288)
T 1ob3_A 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKE--DEGIPSTTIREISILKELKHSNIVKLYDVIHTKK--RLVLVFEHLD 83 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEEECCSSG--GGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSS--CEEEEEECCS
T ss_pred hhcccCCCEEEEEEEcCCCCEEEEEEEecccc--ccccchhHHHHHHHHHhcCCCCEeeeeeEEccCC--eEEEEEEecC
Confidence 78999999999999998899999999854322 1223467889999999999999999999998876 7999999998
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+ +|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 84 ~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 151 (288)
T 1ob3_A 84 Q-DLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFG 151 (288)
T ss_dssp E-EHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHC
T ss_pred C-CHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccC
Confidence 5 9999986432 4589999999999999999999999 99999999999999999999999999998764
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-25 Score=222.47 Aligned_cols=144 Identities=22% Similarity=0.294 Sum_probs=120.0
Q ss_pred chhCcCCCeeEEEEEeC-CCCE----EEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPE----IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~----vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||+||+|++. +++. ||+|.+... ......++|.+|+.++++++||||++++++|... ..++|
T Consensus 21 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~~v 94 (327)
T 3poz_A 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLI 94 (327)
T ss_dssp EEEEEETTEEEEEEEECC----CCEEEEEEEC----------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS---SEEEE
T ss_pred eEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccc---cCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC---CeEEE
Confidence 78999999999999975 4544 466665322 1223456799999999999999999999999875 47899
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
+||+++|+|.+++.... ..+++..+..|+.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+..
T Consensus 95 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 95 TQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred EEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence 99999999999997533 3589999999999999999999999 999999999999999999999999999987653
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.92 E-value=3.5e-26 Score=229.24 Aligned_cols=147 Identities=14% Similarity=0.079 Sum_probs=118.8
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccc----cchhhHHHHHHHHHHHhccC---------CCCccceeeEE---
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEH----WTGYLELYFQREVADLARIN---------HENTGKLLGYC--- 427 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~----~~~~~~~~~~~E~~~l~~l~---------H~niv~l~g~~--- 427 (521)
+.||+|+||+||+|+. +|+.||||++...... ......+.+.+|+.++++++ |||||++.+.+
T Consensus 26 ~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~~ 104 (336)
T 2vuw_A 26 EKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQ 104 (336)
T ss_dssp EEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEEE
T ss_pred eeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEec
Confidence 7899999999999998 6789999999654321 12223467889999998886 66666666654
Q ss_pred --------------ecC-----------CCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh-cC
Q 009965 428 --------------RES-----------SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH-TE 481 (521)
Q Consensus 428 --------------~~~-----------~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~ 481 (521)
.+. .....++||||+++|++.+.+.. ..+++..+..|+.||+.||+||| +.
T Consensus 105 ~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL~~lH~~~ 181 (336)
T 2vuw_A 105 GSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASLAVAEASL 181 (336)
T ss_dssp SSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 220 02278999999999987777643 34899999999999999999999 88
Q ss_pred CCCCeEecCCCCCCeeecCCC--------------------CeeeCCCchhhhccc
Q 009965 482 LGPPFTISELNSSAVYLTEDF--------------------SPKVSPLCLSFLLVS 517 (521)
Q Consensus 482 ~~~~ivH~Dlk~~NiLld~~~--------------------~~kl~DfGla~~~~~ 517 (521)
+|+||||||+|||++.++ .+||+|||+|+.+.+
T Consensus 182 ---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~ 234 (336)
T 2vuw_A 182 ---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD 234 (336)
T ss_dssp ---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET
T ss_pred ---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC
Confidence 999999999999999887 899999999997654
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-25 Score=225.88 Aligned_cols=145 Identities=20% Similarity=0.263 Sum_probs=124.4
Q ss_pred chhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEE
Q 009965 364 NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
+.||+|+||.||+|++. ++..||||++... .......++.+|+.++.+++||||+++++++.+.. ..++
T Consensus 77 ~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~l 151 (367)
T 3l9p_A 77 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV---CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL--PRFI 151 (367)
T ss_dssp EECCCCSSSCEEEEEECC-----CCEEEEEEECCSS---CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCEE
T ss_pred eEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc---cChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--CCEE
Confidence 78999999999999853 3568999998432 12334567899999999999999999999998876 7899
Q ss_pred EEecCCCCChhhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCC---CeeeCCC
Q 009965 438 VFDYASNGTLYEHLHYGE-----RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF---SPKVSPL 509 (521)
Q Consensus 438 v~ey~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~---~~kl~Df 509 (521)
||||+++|+|.+++.... ...+++.++..|+.|+++||+|||+. +|+||||||+|||++.++ .+||+||
T Consensus 152 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~DF 228 (367)
T 3l9p_A 152 LLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF 228 (367)
T ss_dssp EEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECCC
T ss_pred EEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEECCC
Confidence 999999999999997422 23589999999999999999999999 999999999999999554 5999999
Q ss_pred chhhhcc
Q 009965 510 CLSFLLV 516 (521)
Q Consensus 510 Gla~~~~ 516 (521)
|+++.+.
T Consensus 229 G~a~~~~ 235 (367)
T 3l9p_A 229 GMARDIY 235 (367)
T ss_dssp HHHHHHH
T ss_pred ccccccc
Confidence 9998653
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-25 Score=222.57 Aligned_cols=144 Identities=22% Similarity=0.370 Sum_probs=123.3
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC--CceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP--FTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~--~~~~lv~ey 441 (521)
+.||+|+||+||+|+.. ++.||||++.... .....+.+|+.++.+++||||+++++++..... ...++||||
T Consensus 30 ~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~ 103 (322)
T 3soc_A 30 EVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-----KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAF 103 (322)
T ss_dssp EEEECSTTCEEEEEEET-TEEEEEEEECGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred heecccCceEEEEEEEC-CCEEEEEEeecCc-----hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEec
Confidence 78999999999999886 6889999984321 223456679999999999999999999986541 146999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-------CCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL-------GPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-------~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
+++|+|.++++.. .++|..+..|+.|+++||+|||+.+ .++|+||||||+|||+++++.+||+|||+++.
T Consensus 104 ~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~ 180 (322)
T 3soc_A 104 HEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALK 180 (322)
T ss_dssp CTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred CCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccc
Confidence 9999999999643 3899999999999999999999862 34899999999999999999999999999976
Q ss_pred cc
Q 009965 515 LV 516 (521)
Q Consensus 515 ~~ 516 (521)
+.
T Consensus 181 ~~ 182 (322)
T 3soc_A 181 FE 182 (322)
T ss_dssp EC
T ss_pred cc
Confidence 54
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=99.92 E-value=2.7e-25 Score=217.46 Aligned_cols=144 Identities=24% Similarity=0.332 Sum_probs=129.6
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. ++..||+|.+.... ...+.+.+|+.++.+++||||+++++++.+.. ..++||||+
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e~~ 91 (288)
T 3kfa_A 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--PFYIITEFM 91 (288)
T ss_dssp EESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-----THHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SEEEEEECC
T ss_pred eecCCCCceeEEEeEecCCCEEEEEEecCcCH-----HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--CEEEEEEcC
Confidence 78999999999999997 57889999984321 23467899999999999999999999998876 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.......+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++.+..
T Consensus 92 ~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 163 (288)
T 3kfa_A 92 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 163 (288)
T ss_dssp TTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCS
T ss_pred CCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccC
Confidence 999999999865666799999999999999999999999 999999999999999999999999999987653
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-25 Score=239.23 Aligned_cols=142 Identities=20% Similarity=0.292 Sum_probs=126.6
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|++.++..||||++..... ..++|.+|++++.+++||||+++++++.+ + ..++||||++
T Consensus 273 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~--~~~lv~e~~~ 344 (535)
T 2h8h_A 273 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E--PIYIVTEYMS 344 (535)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECTTSS-----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S--SCEEEECCCT
T ss_pred eecccCCCeEEEEEEECCCceEEEEEeCCCCC-----CHHHHHHHHHHHHhCCCCCEeeEEEEEee-c--cceEeeehhc
Confidence 78999999999999998888899999853221 24579999999999999999999999976 3 5899999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+|+|.++++......+++.++..|+.||++||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 345 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 414 (535)
T 2h8h_A 345 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 414 (535)
T ss_dssp TEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCC
T ss_pred CCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecC
Confidence 99999999743334589999999999999999999999 99999999999999999999999999998764
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.6e-25 Score=225.97 Aligned_cols=145 Identities=24% Similarity=0.252 Sum_probs=126.4
Q ss_pred chhCcCCCeeEEEEEeC--------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCc
Q 009965 364 NIIGSSPDSLVYKGTMK--------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFT 434 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~--------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 434 (521)
+.||+|+||.||+|+.. ++..||||++... ......+++.+|++++.++ +||||+++++++...+ .
T Consensus 75 ~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~--~ 149 (382)
T 3tt0_A 75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD---ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG--P 149 (382)
T ss_dssp EEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT---CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--S
T ss_pred eEEecCCCeEEEEEEEccccccccccceEEEEEeeccc---cCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCC--c
Confidence 78999999999999863 2347999988432 1233456799999999999 9999999999998876 7
Q ss_pred eEEEEecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC
Q 009965 435 RMLVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE 500 (521)
Q Consensus 435 ~~lv~ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~ 500 (521)
.++||||+++|+|.+++.... ...+++.++.+|+.|++.||+|||+. +|+||||||+|||+++
T Consensus 150 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~ 226 (382)
T 3tt0_A 150 LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTE 226 (382)
T ss_dssp CEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECT
T ss_pred eEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEEcC
Confidence 899999999999999997433 23589999999999999999999999 9999999999999999
Q ss_pred CCCeeeCCCchhhhcc
Q 009965 501 DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 501 ~~~~kl~DfGla~~~~ 516 (521)
++.+||+|||+++.+.
T Consensus 227 ~~~~kL~DFG~a~~~~ 242 (382)
T 3tt0_A 227 DNVMKIADFGLARDIH 242 (382)
T ss_dssp TCCEEECSCSCCCCSS
T ss_pred CCcEEEcccCcccccc
Confidence 9999999999998664
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=6.8e-25 Score=218.06 Aligned_cols=144 Identities=17% Similarity=0.220 Sum_probs=118.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|.+..... ....+.+.+|+.++.+++||||+++++++.+.+ ..++||||+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~ 85 (317)
T 2pmi_A 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE---EGTPSTAIREISLMKELKHENIVRLYDVIHTEN--KLTLVFEFM 85 (317)
T ss_dssp --------CEEEEEECSSSCCEEEEEEEECCST---TCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTT--EEEEEEECC
T ss_pred eEECCCCCEEEEEEEECCCCcEEEEEEeecccc---cccHHHHHHHHHHHHhcCCCCcceEEEEEEECC--eEEEEEEec
Confidence 78999999999999986 689999999854332 123356889999999999999999999998876 899999999
Q ss_pred CCCChhhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYG----ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+ |+|.+++... ....+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 86 ~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 86 D-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp C-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred C-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 8 5999998632 224589999999999999999999999 99999999999999999999999999998754
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-25 Score=223.05 Aligned_cols=145 Identities=16% Similarity=0.250 Sum_probs=126.6
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|++..... ......+.+.+|+.+++.++||||+++++++.+.. ..++||||+
T Consensus 15 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--~~~lv~E~~ 91 (336)
T 3h4j_B 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLL-KKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPT--DIVMVIEYA 91 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEehHHc-cchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEEEEECC
Confidence 78999999999999985 789999999854321 11223457899999999999999999999999877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
+|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.+
T Consensus 92 -~g~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~ 160 (336)
T 3h4j_B 92 -GGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD 160 (336)
T ss_dssp -CEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT
T ss_pred -CCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccC
Confidence 679999986443 489999999999999999999999 999999999999999999999999999987654
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=5.8e-25 Score=228.26 Aligned_cols=149 Identities=19% Similarity=0.224 Sum_probs=128.0
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceE
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
++|. +.||+|+||.||+|... +|+.+|+|.+..+.. .....+.+.+|+.++.+++||||+++++++.+.+ ..+
T Consensus 11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~~~ 86 (444)
T 3soa_A 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL--SARDHQKLEREARICRLLKHPNIVRLHDSISEEG--HHY 86 (444)
T ss_dssp HHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSC--HHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSS--EEE
T ss_pred CCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECC--EEE
Confidence 4454 88999999999999886 788999999865432 2334567899999999999999999999998877 899
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeec---CCCCeeeCCCchhh
Q 009965 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT---EDFSPKVSPLCLSF 513 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld---~~~~~kl~DfGla~ 513 (521)
+||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++ +++.+||+|||+++
T Consensus 87 lv~E~~~gg~L~~~i~~~~--~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 87 LIFDLVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp EEECCCBCCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEEEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 9999999999999997543 489999999999999999999999 999999999999998 46789999999998
Q ss_pred hccc
Q 009965 514 LLVS 517 (521)
Q Consensus 514 ~~~~ 517 (521)
.+..
T Consensus 162 ~~~~ 165 (444)
T 3soa_A 162 EVEG 165 (444)
T ss_dssp CCCT
T ss_pred EecC
Confidence 7653
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.8e-25 Score=225.33 Aligned_cols=141 Identities=13% Similarity=0.077 Sum_probs=122.0
Q ss_pred chhCcCCCeeEEEEE------eCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC---CCCccceeeEEecCCCCc
Q 009965 364 NIIGSSPDSLVYKGT------MKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN---HENTGKLLGYCRESSPFT 434 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~------~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~ 434 (521)
+.||+|+||+||+|+ ..+++.||||++... ...++..|+.++.+++ |+||+++++++...+ .
T Consensus 71 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-------~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~--~ 141 (365)
T 3e7e_A 71 HLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-------NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN--G 141 (365)
T ss_dssp EEEEECSSEEEEEEEC-------CCCCEEEEEESSC-------CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS--C
T ss_pred EEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-------ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC--C
Confidence 789999999999994 346889999998432 1346788888888886 999999999998877 7
Q ss_pred eEEEEecCCCCChhhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC-----------
Q 009965 435 RMLVFDYASNGTLYEHLHYG---ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE----------- 500 (521)
Q Consensus 435 ~~lv~ey~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~----------- 500 (521)
.++||||+++|+|.+++... ....++|.++..|+.|+++||+|||+. +|+||||||+|||++.
T Consensus 142 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~~~ 218 (365)
T 3e7e_A 142 SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDDL 218 (365)
T ss_dssp EEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC------
T ss_pred cEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccccccc
Confidence 89999999999999999631 234699999999999999999999998 9999999999999998
Q ss_pred CCCeeeCCCchhhhcc
Q 009965 501 DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 501 ~~~~kl~DfGla~~~~ 516 (521)
++.+||+|||+|+.+.
T Consensus 219 ~~~~kl~DFG~a~~~~ 234 (365)
T 3e7e_A 219 SAGLALIDLGQSIDMK 234 (365)
T ss_dssp CTTEEECCCTTCEEGG
T ss_pred cCCEEEeeCchhhhhh
Confidence 8999999999997553
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=99.92 E-value=3.1e-25 Score=216.11 Aligned_cols=143 Identities=17% Similarity=0.318 Sum_probs=126.2
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|+..++..||+|.+.... ...+.+.+|++++.+++||||+++++++.+. ..++||||++
T Consensus 19 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~v~e~~~ 90 (279)
T 1qpc_A 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-----MSPDAFLAEANLMKQLQHQRLVRLYAVVTQE---PIYIITEYME 90 (279)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECTTS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECSS---SCEEEEECCT
T ss_pred eeecCCCCeEEEEEEEcCCcEEEEEEecCCc-----ccHHHHHHHHHHHHhCCCcCcceEEEEEcCC---CcEEEEecCC
Confidence 7899999999999999888899999884322 1245789999999999999999999998754 5799999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
+|+|.+++.......+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++.+..
T Consensus 91 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 161 (279)
T 1qpc_A 91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 161 (279)
T ss_dssp TCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred CCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccC
Confidence 99999999643333589999999999999999999999 999999999999999999999999999987643
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.4e-25 Score=219.58 Aligned_cols=148 Identities=16% Similarity=0.088 Sum_probs=124.6
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCce
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 435 (521)
++|. ++||+|+||+||+|+.. +++.||||++..... ......++..|+..+.++ +||||++++++|.+.+ ..
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~--~~ 132 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFR--GPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG--IL 132 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCC--SHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEeccccc--ChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC--EE
Confidence 3454 78999999999999997 789999998743322 223344566677666666 9999999999998877 89
Q ss_pred EEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 436 ~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
++||||+ +|+|.+++.... ..++|..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 133 ~lv~e~~-~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~ 207 (311)
T 3p1a_A 133 YLQTELC-GPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVEL 207 (311)
T ss_dssp EEEEECC-CCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEEC
T ss_pred EEEEecc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeec
Confidence 9999999 569999886433 4599999999999999999999999 9999999999999999999999999998766
Q ss_pred c
Q 009965 516 V 516 (521)
Q Consensus 516 ~ 516 (521)
.
T Consensus 208 ~ 208 (311)
T 3p1a_A 208 G 208 (311)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-25 Score=222.59 Aligned_cols=147 Identities=17% Similarity=0.226 Sum_probs=124.3
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCC--ceEEEEe
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF--TRMLVFD 440 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~--~~~lv~e 440 (521)
+.||+|+||.||+|+.. +++.||||++..... ......+.+.+|+.++.+++||||+++++++...... ..++|||
T Consensus 18 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e 96 (311)
T 3ork_A 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLA-RDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME 96 (311)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECTTTT-TSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEccCCCEEEEEEEECCCCceEEEEEeCcccc-CCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEe
Confidence 78999999999999985 788999999854322 2233456789999999999999999999998765421 2499999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|+++|+|.++++... .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 97 ~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 167 (311)
T 3ork_A 97 YVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIA 167 (311)
T ss_dssp CCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC----
T ss_pred cCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCccccc
Confidence 999999999996443 589999999999999999999999 99999999999999999999999999998654
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.9e-25 Score=219.01 Aligned_cols=145 Identities=22% Similarity=0.265 Sum_probs=126.4
Q ss_pred chhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEE
Q 009965 364 NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
+.||+|+||.||+|+.. ++..||+|++... ......+.+.+|+.++.+++||||+++++++.+.+ ..++
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~l 103 (314)
T 2ivs_A 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN---ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG--PLLL 103 (314)
T ss_dssp EEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTT---CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--SCEE
T ss_pred eeecccCCeeEEEEEEeccCcccCcceEEEEeccCC---CCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC--ceEE
Confidence 78999999999999872 3578999998432 12334567999999999999999999999998876 7899
Q ss_pred EEecCCCCChhhhhccCCC----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCC
Q 009965 438 VFDYASNGTLYEHLHYGER----------------------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSA 495 (521)
Q Consensus 438 v~ey~~~gsL~~~l~~~~~----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~N 495 (521)
||||+++|+|.+++..... ..+++.++.+++.|+++||+|||+. +|+||||||+|
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp~N 180 (314)
T 2ivs_A 104 IVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARN 180 (314)
T ss_dssp EEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred EEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccchhe
Confidence 9999999999999974322 3489999999999999999999999 99999999999
Q ss_pred eeecCCCCeeeCCCchhhhcc
Q 009965 496 VYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 496 iLld~~~~~kl~DfGla~~~~ 516 (521)
|++++++.+||+|||+++.+.
T Consensus 181 Ili~~~~~~kl~Dfg~~~~~~ 201 (314)
T 2ivs_A 181 ILVAEGRKMKISDFGLSRDVY 201 (314)
T ss_dssp EEEETTTEEEECCCTTCEECT
T ss_pred EEEcCCCCEEEcccccccccc
Confidence 999999999999999998653
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=99.92 E-value=5.4e-25 Score=219.59 Aligned_cols=139 Identities=19% Similarity=0.241 Sum_probs=122.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|+.. +++.||||++... ....+.+|+.++..++ ||||+++++++.+.. ..++||||
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~--~~~lv~e~ 87 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR-------MEANTQKEITALKLCEGHPNIVKLHEVFHDQL--HTFLVMEL 87 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG-------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEECC
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh-------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCC--EEEEEEEc
Confidence 67999999999999986 6899999998432 2356789999999997 999999999998877 89999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCC---CeeeCCCchhhhcc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF---SPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~---~~kl~DfGla~~~~ 516 (521)
+++|+|.+++.... .+++.++..|+.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+++...
T Consensus 88 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 160 (325)
T 3kn6_A 88 LNGGELFERIKKKK--HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKP 160 (325)
T ss_dssp CCSCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECC
T ss_pred cCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecC
Confidence 99999999997543 599999999999999999999999 999999999999997765 89999999998654
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=99.92 E-value=5.1e-25 Score=230.31 Aligned_cols=146 Identities=20% Similarity=0.278 Sum_probs=129.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +|+.||||++..... ......+.+.+|+.+++.++||||+++++++...+ ..++||||+
T Consensus 22 ~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~--~~~lv~E~~ 98 (476)
T 2y94_A 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKI-RSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPS--DIFMVMEYV 98 (476)
T ss_dssp EEEECCSSSCEEEEEETTTCCEEEEEEEEHHHH-HHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhc-cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEEeCC
Confidence 78999999999999987 789999999854321 11223457899999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+..
T Consensus 99 ~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 99 SGGELFDYICKN--GRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp SSEEHHHHTTSS--SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence 999999999643 3599999999999999999999999 999999999999999999999999999987654
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.92 E-value=6.1e-25 Score=220.75 Aligned_cols=146 Identities=22% Similarity=0.301 Sum_probs=124.4
Q ss_pred chhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceE
Q 009965 364 NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 436 (521)
+.||+|+||.||+|+.. ++..||+|.+.... .....+.+.+|+.++.++ +||||+++++++...+ ..+
T Consensus 51 ~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~--~~~ 125 (344)
T 1rjb_A 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA---DSSEREALMSELKMMTQLGSHENIVNLLGACTLSG--PIY 125 (344)
T ss_dssp EEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC---------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCE
T ss_pred eeecCCCCceeEEeeeeccccCCcceEEEEEeccccc---CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC--ccE
Confidence 78999999999999872 35679999985332 122346799999999999 9999999999998876 789
Q ss_pred EEEecCCCCChhhhhccCCC---------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCC
Q 009965 437 LVFDYASNGTLYEHLHYGER---------------------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSA 495 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~N 495 (521)
+||||+++|+|.+++..... ..++|..+..++.|++.||+|||+. +|+||||||+|
T Consensus 126 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~N 202 (344)
T 1rjb_A 126 LIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARN 202 (344)
T ss_dssp EEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSGGG
T ss_pred EEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhh
Confidence 99999999999999975332 2489999999999999999999999 99999999999
Q ss_pred eeecCCCCeeeCCCchhhhccc
Q 009965 496 VYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 496 iLld~~~~~kl~DfGla~~~~~ 517 (521)
||++.++.+||+|||+++.+..
T Consensus 203 Ill~~~~~~kL~Dfg~~~~~~~ 224 (344)
T 1rjb_A 203 VLVTHGKVVKICDFGLARDIMS 224 (344)
T ss_dssp EEEETTTEEEECCCGGGSCGGG
T ss_pred EEEcCCCcEEeCCCccCccccc
Confidence 9999999999999999986643
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=6.2e-25 Score=212.33 Aligned_cols=142 Identities=20% Similarity=0.267 Sum_probs=127.4
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|+..+++.||+|.+..... ..+++.+|++++.+++||||+++++++.+.+ ..++||||++
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~ 86 (267)
T 3t9t_A 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-----SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA--PICLVTEFME 86 (267)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECTTTB-----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SCEEEECCCT
T ss_pred eEecCCCceeEEEEEecCCCeEEEEEccccCC-----CHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--CeEEEEeCCC
Confidence 78999999999999998888999999853321 2357899999999999999999999998876 7899999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+|+|.+++.... ..+++..+..++.|+++||+|||+. +++||||||+||++++++.+||+|||+++...
T Consensus 87 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 155 (267)
T 3t9t_A 87 HGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVL 155 (267)
T ss_dssp TCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBC
T ss_pred CCcHHHHHhhCc-ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccc
Confidence 999999997432 3589999999999999999999999 99999999999999999999999999998753
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=222.40 Aligned_cols=144 Identities=15% Similarity=0.193 Sum_probs=126.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|.+.... ......+.+|+.++.+++||||+++++++.+.. ..++||||+
T Consensus 57 ~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~----~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~lv~E~~ 130 (387)
T 1kob_A 57 EELGSGAFGVVHRCVEKATGRVFVAKFINTPY----PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKY--EMVLILEFL 130 (387)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSS--EEEEEEECC
T ss_pred EEEecCCCEEEEEEEECCCCCEEEEEEecccc----hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCC--EEEEEEEcC
Confidence 78999999999999986 68899999885332 123457899999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC--CCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE--DFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~--~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++... ...+++.++..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++.+..
T Consensus 131 ~gg~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~ 203 (387)
T 1kob_A 131 SGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 203 (387)
T ss_dssp CCCBHHHHTTCT-TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred CCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCC
Confidence 999999999643 33589999999999999999999999 9999999999999974 57899999999987653
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=99.92 E-value=6.3e-25 Score=232.44 Aligned_cols=148 Identities=20% Similarity=0.148 Sum_probs=129.5
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
++||+|+||.||+|+.. +|+.||+|++...... .....+.+.+|+.++.+++||||+++++++.+.. ..++||||+
T Consensus 191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~-~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~--~l~lVmE~~ 267 (543)
T 3c4z_A 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLK-KRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKT--DLCLVMTIM 267 (543)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhh-hhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCC--EEEEEEEec
Confidence 67999999999999986 6899999998543211 1223457899999999999999999999998876 899999999
Q ss_pred CCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGE--RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.... ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.+..
T Consensus 268 ~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 268 NGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp TTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred cCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 9999999987433 34699999999999999999999999 999999999999999999999999999987643
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.8e-25 Score=221.42 Aligned_cols=146 Identities=18% Similarity=0.220 Sum_probs=126.9
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||||++..... ......+++.+|++++.+++||||+++++++...+ ..++||||+
T Consensus 60 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e~~ 136 (348)
T 1u5q_A 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH--TAWLVMEYC 136 (348)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEESCSS-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred eEEccCCCEEEEEEEEccCCeEEEEEEEccccc-cchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--eEEEEEecC
Confidence 78999999999999975 788999999854322 22334467999999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
+ |+|.+++... ...+++.++..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++.+.+
T Consensus 137 ~-g~l~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 137 L-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp S-EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred C-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 7 6888888532 24589999999999999999999999 999999999999999999999999999987643
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.4e-25 Score=216.63 Aligned_cols=139 Identities=22% Similarity=0.314 Sum_probs=118.2
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhc--cCCCCccceeeEEecCC--CCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLAR--INHENTGKLLGYCRESS--PFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~g~~~~~~--~~~~~lv~ 439 (521)
+.||+|+||+||+|+. +++.||||++... ..+.+.+|.+++.. ++||||+++++++.... ....++||
T Consensus 14 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-------~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 85 (301)
T 3q4u_A 14 ECVGKGRYGEVWRGSW-QGENVAVKIFSSR-------DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLIT 85 (301)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEECGG-------GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeccCCCcEEEEEEE-CCEEEEEEEeccc-------cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEeh
Confidence 7899999999999988 6788999997432 23445667776666 79999999999976432 12579999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCCeEecCCCCCCeeecCCCCeeeCCCch
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH--------TELGPPFTISELNSSAVYLTEDFSPKVSPLCL 511 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGl 511 (521)
||+++|+|.++++. ..+++..+.+|+.|++.||+||| +. +|+||||||+|||++.++.+||+|||+
T Consensus 86 e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 159 (301)
T 3q4u_A 86 HYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIADLGL 159 (301)
T ss_dssp CCCTTCBHHHHHTT---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred hhccCCCHHHHHhh---cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEeeCCC
Confidence 99999999999953 24899999999999999999999 66 999999999999999999999999999
Q ss_pred hhhcc
Q 009965 512 SFLLV 516 (521)
Q Consensus 512 a~~~~ 516 (521)
++...
T Consensus 160 a~~~~ 164 (301)
T 3q4u_A 160 AVMHS 164 (301)
T ss_dssp CEEEE
T ss_pred eeecc
Confidence 97654
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.6e-25 Score=225.06 Aligned_cols=148 Identities=17% Similarity=0.220 Sum_probs=127.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
++||+|+||.||+|+.. +++.||||++..... ....+.+.+|++++.+++||||+++++++........++||||+
T Consensus 15 ~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~ 91 (396)
T 4eut_A 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISF---LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFC 91 (396)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECGGGG---GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCC
T ss_pred EEEEcCCCeEEEEEEECCCCcEEEEEEeccccc---cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecC
Confidence 78999999999999987 589999999853321 12345688999999999999999999999876544679999999
Q ss_pred CCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee----cCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGE-RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL----TEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLl----d~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.... ...+++..+..|+.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++.+..
T Consensus 92 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~ 168 (396)
T 4eut_A 92 PCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (396)
T ss_dssp TTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCC
T ss_pred CCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCceEccC
Confidence 9999999997432 23489999999999999999999999 99999999999999 7788899999999987643
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.2e-25 Score=223.58 Aligned_cols=148 Identities=18% Similarity=0.099 Sum_probs=128.1
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCce
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 435 (521)
.+|. +.||+|+||.||+|+.. +++.||+|++...... .....+.+..|..++..+ +||||+++++++.+.+ ..
T Consensus 20 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~-~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~--~~ 96 (353)
T 2i0e_A 20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVI-QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--RL 96 (353)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHH-HTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSS--EE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-cchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCC--EE
Confidence 4454 78999999999999997 5789999998543211 122345688999999988 8999999999998877 89
Q ss_pred EEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 436 ~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 97 ~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~ 171 (353)
T 2i0e_A 97 YFVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 171 (353)
T ss_dssp EEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCccccc
Confidence 99999999999999996433 489999999999999999999999 9999999999999999999999999999863
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=6e-25 Score=217.56 Aligned_cols=146 Identities=18% Similarity=0.247 Sum_probs=127.3
Q ss_pred chhCcCCCeeEEEEEe------CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceE
Q 009965 364 NIIGSSPDSLVYKGTM------KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~------~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 436 (521)
+.||+|+||.||+|+. .++..||+|.+.... .....+.+.+|+.++.++ +||||+++++++...+ ..+
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~--~~~ 103 (313)
T 1t46_A 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA---HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG--PTL 103 (313)
T ss_dssp EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCE
T ss_pred HhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch---hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC--CcE
Confidence 7899999999999985 246789999985322 223456799999999999 9999999999998876 789
Q ss_pred EEEecCCCCChhhhhccCCC----------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC
Q 009965 437 LVFDYASNGTLYEHLHYGER----------------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE 500 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~~----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~ 500 (521)
+||||+++|+|.+++..... ..+++.++.+++.|+++||+|||+. +|+||||||+||++++
T Consensus 104 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~ 180 (313)
T 1t46_A 104 VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTH 180 (313)
T ss_dssp EEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEET
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEcC
Confidence 99999999999999974432 2489999999999999999999999 9999999999999999
Q ss_pred CCCeeeCCCchhhhccc
Q 009965 501 DFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 501 ~~~~kl~DfGla~~~~~ 517 (521)
++.+||+|||+++.+..
T Consensus 181 ~~~~kl~Dfg~~~~~~~ 197 (313)
T 1t46_A 181 GRITKICDFGLARDIKN 197 (313)
T ss_dssp TTEEEECCCGGGSCTTS
T ss_pred CCCEEEccccccccccc
Confidence 99999999999987643
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.7e-25 Score=221.57 Aligned_cols=157 Identities=15% Similarity=0.137 Sum_probs=128.8
Q ss_pred HHHHHhhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeec-cccchhhHHHHHHHHHHHhccCCCCccceeeEEecC
Q 009965 355 LEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKE-EHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430 (521)
Q Consensus 355 l~~~~~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~-~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 430 (521)
+....++|. +.||+|+||.||+|+.. ++..||+|.+.... ........+.+.+|+.++.+++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 344455665 89999999999999986 68899999985432 111233456899999999999999999999999887
Q ss_pred CCCceEEEEecCCCCChhhhhccC--------------------------------------CCCCCCHHHHHHHHHHHH
Q 009965 431 SPFTRMLVFDYASNGTLYEHLHYG--------------------------------------ERCQVSWTRRMKIVIGIA 472 (521)
Q Consensus 431 ~~~~~~lv~ey~~~gsL~~~l~~~--------------------------------------~~~~l~~~~~~~i~~~ia 472 (521)
+ ..++||||+++|+|.+++... ....+++..+..|+.|++
T Consensus 101 ~--~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~ 178 (345)
T 3hko_A 101 Q--YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIF 178 (345)
T ss_dssp S--EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHH
T ss_pred C--eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHH
Confidence 7 899999999999999998510 011246777889999999
Q ss_pred HHHHHHhcCCCCCeEecCCCCCCeeecCCC--CeeeCCCchhhhcc
Q 009965 473 RGLKYLHTELGPPFTISELNSSAVYLTEDF--SPKVSPLCLSFLLV 516 (521)
Q Consensus 473 ~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~--~~kl~DfGla~~~~ 516 (521)
+||+|||+. +|+||||||+|||++.++ .+||+|||+++.+.
T Consensus 179 ~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~ 221 (345)
T 3hko_A 179 SALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFY 221 (345)
T ss_dssp HHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGG
T ss_pred HHHHHHHHC---CccccCCChhhEEEecCCCceEEEeecccccccc
Confidence 999999999 999999999999998766 89999999998653
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.3e-25 Score=238.54 Aligned_cols=144 Identities=24% Similarity=0.287 Sum_probs=125.7
Q ss_pred chhCcCCCeeEEEEEeC---CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEe
Q 009965 364 NIIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
+.||+|+||.||+|.+. .++.||||++.... ......++|.+|+.++.+++|||||+++++|... ..++|||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~---~~~lv~E 449 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA--NDPALKDELLAEANVMQQLDNPYIVRMIGICEAE---SWMLVME 449 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGG--GCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS---SEEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---CEEEEEE
Confidence 47999999999999764 45789999985432 2233457899999999999999999999999754 4789999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
|+++|+|.+++.... .+++.++..|+.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.+..
T Consensus 450 ~~~~g~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~ 521 (635)
T 4fl3_A 450 MAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 521 (635)
T ss_dssp CCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC
T ss_pred ccCCCCHHHHHhhCC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCcccccc
Confidence 999999999996443 489999999999999999999999 999999999999999999999999999997643
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.92 E-value=4.3e-25 Score=224.47 Aligned_cols=145 Identities=25% Similarity=0.320 Sum_probs=118.2
Q ss_pred chhCcCCCeeEEEEEeCC--C--CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMKG--G--PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~--~--~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||.||+|++.+ + ..||+|.+... ......++|.+|+.++.+++||||++++++|...+. ..++||
T Consensus 95 ~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~-~~~lv~ 170 (373)
T 3c1x_A 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLVVL 170 (373)
T ss_dssp EEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC---SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSS-CCEEEE
T ss_pred cEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC---CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCC-CeEEEE
Confidence 789999999999998742 2 35888887432 122345689999999999999999999999865432 579999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
||+++|+|.++++.. ...+++.++..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 171 e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 243 (373)
T 3c1x_A 171 PYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMY 243 (373)
T ss_dssp ECCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred ECCCCCCHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccc
Confidence 999999999999743 34589999999999999999999999 99999999999999999999999999998653
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.4e-25 Score=224.17 Aligned_cols=144 Identities=21% Similarity=0.132 Sum_probs=117.5
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHH-HhccCCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVAD-LARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~-l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|+.. ++..||+|++...... .....+.+.+|..+ +..++||||+++++++.+.+ ..|+||||
T Consensus 44 ~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~-~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~--~~~lv~E~ 120 (373)
T 2r5t_A 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAIL-KKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD--KLYFVLDY 120 (373)
T ss_dssp EEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC--------------CCBCCCCCTTBCCEEEEEECSS--EEEEEEEC
T ss_pred EEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhh-hhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCC--EEEEEEeC
Confidence 78999999999999987 6889999998544321 12234456777776 56789999999999998877 89999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
+++|+|.+++.... .+++..+..++.+|+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 121 ~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~ 189 (373)
T 2r5t_A 121 INGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKEN 189 (373)
T ss_dssp CCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCcccccc
Confidence 99999999996433 488999999999999999999999 9999999999999999999999999999864
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=7.2e-25 Score=220.91 Aligned_cols=141 Identities=21% Similarity=0.245 Sum_probs=114.9
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||||.+.... ..+.+.+|+.++.+++||||+++++++.... ..++||||+
T Consensus 59 ~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e~~ 130 (349)
T 2w4o_A 59 SELGRGATSIVYRCKQKGTQKPYALKVLKKTV------DKKIVRTEIGVLLRLSHPNIIKLKEIFETPT--EISLVLELV 130 (349)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEC----------------CHHHHHCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred eEEeeCCCEEEEEEEECCCCcEEEEEEeccch------hHHHHHHHHHHHHhCCCCCCcceeeeEecCC--eEEEEEEeC
Confidence 78999999999999997 57899999985321 2346889999999999999999999998876 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC---CCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~---~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++... ..+++.++..++.|+++||+|||+. +|+||||||+|||++. ++.+||+|||+++....
T Consensus 131 ~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 203 (349)
T 2w4o_A 131 TGGELFDRIVEK--GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH 203 (349)
T ss_dssp CSCBHHHHHTTC--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence 999999999643 3589999999999999999999999 9999999999999975 88999999999987643
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2e-25 Score=232.62 Aligned_cols=148 Identities=20% Similarity=0.131 Sum_probs=120.2
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceE
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
++|. +.||+|+||.||+|+.. +++.||||++..... ........+.+|+.++..++||||+++++++...+ ..+
T Consensus 148 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~--~~~ 224 (446)
T 4ejn_A 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVI-VAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD--RLC 224 (446)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-C-------------CCCCCSCTTSCCEEEEEEETT--EEE
T ss_pred HHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhh-hhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCC--EEE
Confidence 3454 78999999999999986 689999999854321 11223456789999999999999999999998877 799
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
+||||+++|+|.+++.... .+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||+|+..
T Consensus 225 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 225 FVMEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp EEECCCSSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EEEeeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 9999999999999996433 58999999999999999999998 7 9999999999999999999999999999864
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=99.92 E-value=7.3e-25 Score=221.89 Aligned_cols=140 Identities=19% Similarity=0.183 Sum_probs=122.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. +++.||||++..... ..+.+.+|+.++++++||||+++++++.+.. ..++||||+
T Consensus 26 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e~~ 98 (361)
T 3uc3_A 26 KDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-----IDENVQREIINHRSLRHPNIVRFKEVILTPT--HLAIIMEYA 98 (361)
T ss_dssp EEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-----SCHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred EEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-----ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCC--EEEEEEEeC
Confidence 78999999999999997 789999999853321 2356889999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCC--eeeCCCchhhhc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS--PKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~--~kl~DfGla~~~ 515 (521)
++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++..
T Consensus 99 ~~~~L~~~l~~~~--~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~ 168 (361)
T 3uc3_A 99 SGGELYERICNAG--RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSS 168 (361)
T ss_dssp CSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC---
T ss_pred CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccc
Confidence 9999999996433 489999999999999999999998 9999999999999987765 999999998743
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=212.06 Aligned_cols=146 Identities=23% Similarity=0.285 Sum_probs=128.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|.+..... ......+.+.+|+.++.+++||||+++++++.+.+ ..++||||+
T Consensus 17 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 93 (278)
T 3cok_A 17 NLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAM-YKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSN--YVYLVLEMC 93 (278)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred eeecCCCceEEEEEEEccCCceEEEEEeehhhh-hhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCC--eEEEEEecC
Confidence 78999999999999985 789999999854321 11223467899999999999999999999998876 889999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 94 ~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 163 (278)
T 3cok_A 94 HNGEMNRYLKNR-VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLK 163 (278)
T ss_dssp TTEEHHHHHHTC-SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred CCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence 999999999743 34689999999999999999999999 99999999999999999999999999988654
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=9.8e-25 Score=215.98 Aligned_cols=144 Identities=20% Similarity=0.239 Sum_probs=127.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|++.... ......+.+.+|+.++.+++||||+++++++...+ ..++||||+
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 84 (311)
T 4agu_A 9 GKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE--DDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKR--RLHLVFEYC 84 (311)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECCCC--C-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred eEEeecCCeEEEEEEeCCCCcEEEEEEeeccc--cchHHHHHHHHHHHHHHhCCCCCccchhheeecCC--eEEEEEEeC
Confidence 78999999999999987 58999999885432 22344567889999999999999999999998876 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 85 ~~~~l~~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 153 (311)
T 4agu_A 85 DHTVLHELDRYQ--RGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLT 153 (311)
T ss_dssp SEEHHHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred CCchHHHHHhhh--cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhcc
Confidence 999999988643 3489999999999999999999999 99999999999999999999999999998654
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-25 Score=225.08 Aligned_cols=146 Identities=18% Similarity=0.127 Sum_probs=126.1
Q ss_pred chhCcCCCeeEEEEEe----CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEE
Q 009965 364 NIIGSSPDSLVYKGTM----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||+++. .+++.||||++............+.+.+|+.++.++ +||||+++++++.... ..++|
T Consensus 60 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~--~~~lv 137 (355)
T 1vzo_A 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET--KLHLI 137 (355)
T ss_dssp EEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT--EEEEE
T ss_pred EEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc--eEEEE
Confidence 7899999999999988 368899999985432211122334577899999999 6999999999998877 78999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|||+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 138 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 138 LDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp ECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred eecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence 99999999999997443 489999999999999999999999 99999999999999999999999999998653
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=6.7e-25 Score=214.75 Aligned_cols=143 Identities=15% Similarity=0.257 Sum_probs=124.5
Q ss_pred chhCcCCCeeEEEEEeCC-C-------CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCce
Q 009965 364 NIIGSSPDSLVYKGTMKG-G-------PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~-~-------~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 435 (521)
+.||+|+||.||+|+... + ..||+|.+.... ....+.+.+|+.++.+++||||+++++++.+.+ ..
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~ 87 (289)
T 4fvq_A 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH----RNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD--EN 87 (289)
T ss_dssp EEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG----GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT--CC
T ss_pred eeeccCCCceEEEEEEecccccccccchhhhhhhccccc----HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC--CC
Confidence 789999999999998863 3 469999874322 234567999999999999999999999998876 78
Q ss_pred EEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCC--------eeeC
Q 009965 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS--------PKVS 507 (521)
Q Consensus 436 ~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~--------~kl~ 507 (521)
++||||+++|+|.+++.... ..+++..+..|+.|++.||+|||+. +|+||||||+|||++.++. +||+
T Consensus 88 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp EEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred EEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceeeec
Confidence 99999999999999997433 3489999999999999999999999 9999999999999998887 9999
Q ss_pred CCchhhhcc
Q 009965 508 PLCLSFLLV 516 (521)
Q Consensus 508 DfGla~~~~ 516 (521)
|||+++...
T Consensus 164 Dfg~~~~~~ 172 (289)
T 4fvq_A 164 DPGISITVL 172 (289)
T ss_dssp CCCSCTTTS
T ss_pred cCccccccc
Confidence 999987653
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.92 E-value=7.2e-25 Score=229.16 Aligned_cols=145 Identities=18% Similarity=0.166 Sum_probs=116.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCC---CCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS---PFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~---~~~~~lv~ 439 (521)
+.||+|+||+||+|+.. +++.||||++.... ......+++.+|++++.+++|||||++++++.... ....|+||
T Consensus 59 ~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 136 (458)
T 3rp9_A 59 HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVF--EDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVL 136 (458)
T ss_dssp CC-------CEEEEEECC--CEEEEEEECSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEE
T ss_pred eEeeecCCeEEEEEEECCCCcEEEEEEechhh--cCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEE
Confidence 78999999999999986 78999999984322 12334567999999999999999999999995432 12689999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
||++ |+|.+++... ..+++..+..|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+.+.
T Consensus 137 e~~~-~~L~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 207 (458)
T 3rp9_A 137 EIAD-SDFKKLFRTP--VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207 (458)
T ss_dssp CCCS-EEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred eccc-cchhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchhcc
Confidence 9985 6999998643 3599999999999999999999999 99999999999999999999999999998765
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.8e-25 Score=212.77 Aligned_cols=148 Identities=26% Similarity=0.468 Sum_probs=127.4
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|+.. ++.||||.+.... ......++|.+|+.++.+++||||+++++++.+......++||||++
T Consensus 16 ~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 92 (271)
T 3kmu_A 16 TKLNENHSGELWKGRWQ-GNDIVVKVLKVRD--WSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92 (271)
T ss_dssp EEEEEETTEEEEEEEET-TEEEEEEEECCTT--CCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCT
T ss_pred HHhcCCCcceEEEEEEC-CeeEEEEEecccc--cCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccC
Confidence 78999999999999985 7889999985432 22344567999999999999999999999998763337899999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
+|+|.++++......+++.++..|+.|+++||+|||+. .++|+||||||+||++++++.++|+|||++...
T Consensus 93 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~ 163 (271)
T 3kmu_A 93 YGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMADVKFSF 163 (271)
T ss_dssp TCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred CCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCCcceeEEeccceeee
Confidence 99999999865555699999999999999999999997 223999999999999999999999988876543
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=6.3e-25 Score=216.34 Aligned_cols=147 Identities=21% Similarity=0.326 Sum_probs=124.4
Q ss_pred chhCcCCCeeEEEEEe-----CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEE
Q 009965 364 NIIGSSPDSLVYKGTM-----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~-----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||+|++ .+++.||+|++..... ....+.+.+|+.++.+++||||+++++++........++|
T Consensus 27 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 103 (302)
T 4e5w_A 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG---GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLI 103 (302)
T ss_dssp EEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC--------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEE
T ss_pred hccCCCCceEEEEEEEccccCccCeEEEEEEeccccc---chhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEE
Confidence 7899999999999984 3578999999854321 2234678999999999999999999999987643368999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
|||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+..
T Consensus 104 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 178 (302)
T 4e5w_A 104 MEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIET 178 (302)
T ss_dssp EECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccccccC
Confidence 99999999999995332 3589999999999999999999999 999999999999999999999999999987643
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-24 Score=214.43 Aligned_cols=153 Identities=23% Similarity=0.274 Sum_probs=126.3
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccc-cchhhHHHHHHHHHHHhccC---CCCccceeeEEecCCC
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH-WTGYLELYFQREVADLARIN---HENTGKLLGYCRESSP 432 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~-~~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~ 432 (521)
++|. +.||+|+||+||+|+.. +++.||+|++...... ........+.+|+.++.+++ ||||+++++++.....
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~ 88 (308)
T 3g33_A 9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRT 88 (308)
T ss_dssp -CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCS
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCC
Confidence 4454 78999999999999985 7899999998654321 11222345677888777764 9999999999976542
Q ss_pred C---ceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCC
Q 009965 433 F---TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPL 509 (521)
Q Consensus 433 ~---~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~Df 509 (521)
. ..++||||++ |+|.+++.......+++.++..|+.|++.||+|||+. +|+||||||+|||+++++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Df 164 (308)
T 3g33_A 89 DREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADF 164 (308)
T ss_dssp SSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEECSC
T ss_pred CCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEeeC
Confidence 1 3789999997 5999999866555699999999999999999999999 9999999999999999999999999
Q ss_pred chhhhcc
Q 009965 510 CLSFLLV 516 (521)
Q Consensus 510 Gla~~~~ 516 (521)
|+++.+.
T Consensus 165 g~a~~~~ 171 (308)
T 3g33_A 165 GLARIYS 171 (308)
T ss_dssp SCTTTST
T ss_pred ccccccC
Confidence 9998765
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=212.26 Aligned_cols=151 Identities=18% Similarity=0.237 Sum_probs=128.8
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCce
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 435 (521)
.+|. +.||+|+||.||+|+.. +++.||+|.+..... ......++.+|+..+..+ +||||+++++++.+.+ ..
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~--~~ 86 (289)
T 1x8b_A 11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLA--GSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDD--HM 86 (289)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCT--TSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETT--EE
T ss_pred chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccccc--ccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCC--eE
Confidence 4454 78999999999999987 789999999854322 223456788999999999 9999999999998877 89
Q ss_pred EEEEecCCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC-------------
Q 009965 436 MLVFDYASNGTLYEHLHYGE--RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE------------- 500 (521)
Q Consensus 436 ~lv~ey~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~------------- 500 (521)
++||||+++|+|.+++.... ...+++..+..|+.|+++||+|||+. +|+||||||+|||++.
T Consensus 87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~ 163 (289)
T 1x8b_A 87 LIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDE 163 (289)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC--------------
T ss_pred EEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccc
Confidence 99999999999999997432 24589999999999999999999999 9999999999999984
Q ss_pred ------CCCeeeCCCchhhhccc
Q 009965 501 ------DFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 501 ------~~~~kl~DfGla~~~~~ 517 (521)
...+||+|||+++....
T Consensus 164 ~~~~~~~~~~kl~Dfg~~~~~~~ 186 (289)
T 1x8b_A 164 DDWASNKVMFKIGDLGHVTRISS 186 (289)
T ss_dssp ------CCCEEECCCTTCEETTC
T ss_pred ccccCCceEEEEcccccccccCC
Confidence 44799999999887653
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=218.02 Aligned_cols=145 Identities=23% Similarity=0.264 Sum_probs=125.4
Q ss_pred chhCcCCCeeEEEEEeC--------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCc
Q 009965 364 NIIGSSPDSLVYKGTMK--------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFT 434 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~--------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 434 (521)
+.||+|+||.||+|+.. ++..||+|++.... .....+++.+|+.++.++ +||||+++++++...+ .
T Consensus 41 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~--~ 115 (334)
T 2pvf_A 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG--P 115 (334)
T ss_dssp EEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--C
T ss_pred eEEeecCceeEEEeEeccccccccccceEEEEeeeccCC---cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCC--c
Confidence 78999999999999873 46789999984321 233456789999999999 9999999999998876 7
Q ss_pred eEEEEecCCCCChhhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC
Q 009965 435 RMLVFDYASNGTLYEHLHYGER--------------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE 500 (521)
Q Consensus 435 ~~lv~ey~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~ 500 (521)
.++||||+++|+|.+++..... ..+++.++..++.|+++||+|||+. +|+||||||+||++++
T Consensus 116 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~ 192 (334)
T 2pvf_A 116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTE 192 (334)
T ss_dssp CEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECT
T ss_pred eEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEEcC
Confidence 8999999999999999974331 2489999999999999999999999 9999999999999999
Q ss_pred CCCeeeCCCchhhhcc
Q 009965 501 DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 501 ~~~~kl~DfGla~~~~ 516 (521)
++.+||+|||+++.+.
T Consensus 193 ~~~~kL~Dfg~~~~~~ 208 (334)
T 2pvf_A 193 NNVMKIADFGLARDIN 208 (334)
T ss_dssp TCCEEECCCTTCEECT
T ss_pred CCCEEEcccccccccc
Confidence 9999999999998654
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=99.92 E-value=8.4e-25 Score=213.07 Aligned_cols=145 Identities=21% Similarity=0.261 Sum_probs=126.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. ++..||+|.+..... ......+.+.+|+.++.+++||||+++++++.+.. ..++||||+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 91 (279)
T 3fdn_A 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQL-EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT--RVYLILEYA 91 (279)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred eEEecCCCeEEEEEEEccCCcEEEEEEEecccc-chhhHHHHHHHHHHHHHcCCCCCCcchhheEecCC--EEEEEEecC
Confidence 78999999999999987 577899999854321 12223567899999999999999999999998876 799999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 92 ~~~~l~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~ 160 (279)
T 3fdn_A 92 PLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP 160 (279)
T ss_dssp TTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC-
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCC
Confidence 9999999996433 489999999999999999999998 99999999999999999999999999886543
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.7e-24 Score=215.32 Aligned_cols=145 Identities=21% Similarity=0.263 Sum_probs=126.9
Q ss_pred chhCcCCCeeEEEEEeC-----CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||++.+. +++.||||++... ......+.+.+|++++.+++||||+++++++.+.+....++|
T Consensus 37 ~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 113 (318)
T 3lxp_A 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD---AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLV 113 (318)
T ss_dssp EEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT---CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEE
T ss_pred heecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc---cChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEE
Confidence 78999999999998763 5778999998532 223445679999999999999999999999987544478999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
|||+++|+|.+++... .+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.+..
T Consensus 114 ~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 186 (318)
T 3lxp_A 114 MEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186 (318)
T ss_dssp ECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECCT
T ss_pred EecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccccccc
Confidence 9999999999999643 389999999999999999999999 999999999999999999999999999987643
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-24 Score=215.70 Aligned_cols=147 Identities=22% Similarity=0.264 Sum_probs=128.9
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeecccc--chhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEe
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW--TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
+.||+|+||.||+|+.. +++.||+|.+....... .....+++.+|+.++.+++||||+++++++.+.. ..++|||
T Consensus 18 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 95 (321)
T 2a2a_A 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT--DVVLILE 95 (321)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred eEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCC--EEEEEEE
Confidence 88999999999999987 68999999986543211 1123567999999999999999999999998876 8999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCC----CeeeCCCchhhhcc
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF----SPKVSPLCLSFLLV 516 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~----~~kl~DfGla~~~~ 516 (521)
|+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++ .+||+|||+++.+.
T Consensus 96 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~ 170 (321)
T 2a2a_A 96 LVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170 (321)
T ss_dssp CCCSCBHHHHHHTC--SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECC
T ss_pred cCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCccceecC
Confidence 99999999999643 3589999999999999999999999 999999999999999888 79999999998764
Q ss_pred c
Q 009965 517 S 517 (521)
Q Consensus 517 ~ 517 (521)
.
T Consensus 171 ~ 171 (321)
T 2a2a_A 171 D 171 (321)
T ss_dssp T
T ss_pred c
Confidence 3
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=7.5e-25 Score=236.68 Aligned_cols=142 Identities=22% Similarity=0.287 Sum_probs=125.1
Q ss_pred hhCcCCCeeEEEEEeC---CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEec
Q 009965 365 IIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 365 ~ig~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
.||+|+||.||+|.+. ++..||||++.... .....++|.+|++++.+++|||||+++++|... ..++||||
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~---~~~lv~E~ 416 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE---ALMLVMEM 416 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCC---SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESS---SEEEEEEC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC---ChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccC---CeEEEEEe
Confidence 7999999999999875 45679999985432 123456799999999999999999999999763 58999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+++|+|.+++... ...+++.++..|+.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 417 ~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~ 487 (613)
T 2ozo_A 417 AGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALG 487 (613)
T ss_dssp CTTCBHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC
T ss_pred CCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCccccc
Confidence 9999999999643 34699999999999999999999999 99999999999999999999999999998764
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=9.3e-25 Score=211.64 Aligned_cols=148 Identities=24% Similarity=0.277 Sum_probs=117.4
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|+.. +..||||.+............+.+.+|++++..++||||+++++++.+.+ ..++||||++
T Consensus 13 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~ 89 (271)
T 3dtc_A 13 EIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEP--NLCLVMEFAR 89 (271)
T ss_dssp EEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC----CEEEEECCT
T ss_pred eeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC--ceEEEEEcCC
Confidence 78999999999999985 78899999854433222334567999999999999999999999998876 7899999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC--------CCCeeeCCCchhhhc
Q 009965 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE--------DFSPKVSPLCLSFLL 515 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~--------~~~~kl~DfGla~~~ 515 (521)
+|+|.+++.. ..+++..+..++.|+++||+|||+....+|+||||||+||++++ ++.+||+|||+++.+
T Consensus 90 ~~~L~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~ 166 (271)
T 3dtc_A 90 GGPLNRVLSG---KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW 166 (271)
T ss_dssp TEEHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC----
T ss_pred CCCHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccccc
Confidence 9999999853 35899999999999999999999982223999999999999986 678999999999865
Q ss_pred cc
Q 009965 516 VS 517 (521)
Q Consensus 516 ~~ 517 (521)
..
T Consensus 167 ~~ 168 (271)
T 3dtc_A 167 HR 168 (271)
T ss_dssp --
T ss_pred cc
Confidence 43
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.4e-25 Score=219.98 Aligned_cols=151 Identities=18% Similarity=0.207 Sum_probs=128.6
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeecccc----chhhHHHHHHHHHHHhccCCCCccceeeEEecCCC
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW----TGYLELYFQREVADLARINHENTGKLLGYCRESSP 432 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 432 (521)
++|. +.||+|+||.||+|+.. +++.||||++....... .....+.+.+|+.++.+++||||+++++++.+.+
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~- 102 (335)
T 3dls_A 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG- 102 (335)
T ss_dssp HHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS-
T ss_pred cceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC-
Confidence 4444 78999999999999976 68899999986443110 1112335778999999999999999999998877
Q ss_pred CceEEEEecCCCC-ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCch
Q 009965 433 FTRMLVFDYASNG-TLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCL 511 (521)
Q Consensus 433 ~~~~lv~ey~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGl 511 (521)
..++||||+..| +|.+++.... .+++..+..|+.|++.||+|||+. +|+||||||+|||+++++.+||+|||+
T Consensus 103 -~~~lv~e~~~~g~~l~~~~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 176 (335)
T 3dls_A 103 -FFQLVMEKHGSGLDLFAFIDRHP--RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGS 176 (335)
T ss_dssp -EEEEEEECCTTSCBHHHHHHTCC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred -EEEEEEEeCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeeccc
Confidence 889999999877 9999996443 489999999999999999999999 999999999999999999999999999
Q ss_pred hhhccc
Q 009965 512 SFLLVS 517 (521)
Q Consensus 512 a~~~~~ 517 (521)
++.+..
T Consensus 177 a~~~~~ 182 (335)
T 3dls_A 177 AAYLER 182 (335)
T ss_dssp CEECCT
T ss_pred ceECCC
Confidence 987653
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.7e-24 Score=221.32 Aligned_cols=148 Identities=22% Similarity=0.281 Sum_probs=119.6
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCCccceeeEEecCCCCce
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~ 435 (521)
.+|. +.||+|+||.||+|... +++.||||++.... ......+++.+|+.++.+++ ||||+++++++...+....
T Consensus 9 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAF--QNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp TTEEEEEC-------CEEEEEETTTCCEEEEEEECC----CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred CceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccc--cChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 4454 78999999999999986 78999999984332 12334567889999999997 9999999999976554468
Q ss_pred EEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 436 ~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
++||||++ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+.+
T Consensus 87 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 159 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSF 159 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred EEEecccC-cCHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence 99999998 5999998643 489999999999999999999999 9999999999999999999999999999865
Q ss_pred c
Q 009965 516 V 516 (521)
Q Consensus 516 ~ 516 (521)
.
T Consensus 160 ~ 160 (388)
T 3oz6_A 160 V 160 (388)
T ss_dssp S
T ss_pred c
Confidence 3
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-24 Score=210.80 Aligned_cols=145 Identities=26% Similarity=0.409 Sum_probs=123.6
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhh---HHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYL---ELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~---~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||.||+|+.. +++.||+|++........... .+.+.+|+.++.+++||||+++++++.+. .++||
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----~~lv~ 100 (287)
T 4f0f_A 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP----PRMVM 100 (287)
T ss_dssp EECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT----TEEEE
T ss_pred hccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC----CeEEE
Confidence 78999999999999986 789999999854432211111 16799999999999999999999999654 37999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEecCCCCCCeeecCCCC-----eeeCCCchh
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP--FTISELNSSAVYLTEDFS-----PKVSPLCLS 512 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivH~Dlk~~NiLld~~~~-----~kl~DfGla 512 (521)
||+++|+|.+++... ...+++..+..++.|++.||+|||+. + |+||||||+|||++.++. +||+|||++
T Consensus 101 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~ 176 (287)
T 4f0f_A 101 EFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS 176 (287)
T ss_dssp ECCTTCBHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTC
T ss_pred EecCCCCHHHHHhcc-cCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeCCCCcc
Confidence 999999999988643 34699999999999999999999998 7 999999999999988776 999999999
Q ss_pred hhcc
Q 009965 513 FLLV 516 (521)
Q Consensus 513 ~~~~ 516 (521)
+...
T Consensus 177 ~~~~ 180 (287)
T 4f0f_A 177 QQSV 180 (287)
T ss_dssp BCCS
T ss_pred cccc
Confidence 7544
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-24 Score=212.99 Aligned_cols=145 Identities=25% Similarity=0.312 Sum_probs=122.9
Q ss_pred chhCcCCCeeEEEEEeCCC----CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMKGG----PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~----~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||.||+|+..++ ..+|+|.+... ......+.+.+|+.++++++||||++++++|...+. ..++||
T Consensus 31 ~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~~v~ 106 (298)
T 3f66_A 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLVVL 106 (298)
T ss_dssp EEEEEETTEEEEEEEEC-----CEEEEEEEETTC---CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS-CCEEEE
T ss_pred ceeeecCCceEEEEEEecCCCceeEEEEEecccC---CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCC-ceEEEE
Confidence 7899999999999987532 25788877432 222345679999999999999999999999765432 679999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
||+++|+|.+++... ...+++.++..|+.|+++||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 107 e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~ 179 (298)
T 3f66_A 107 PYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMY 179 (298)
T ss_dssp ECCTTCBHHHHHHCT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCS
T ss_pred eCCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccccccc
Confidence 999999999999743 34589999999999999999999999 99999999999999999999999999998654
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.91 E-value=1e-24 Score=217.18 Aligned_cols=149 Identities=22% Similarity=0.293 Sum_probs=117.1
Q ss_pred chhCcCCCeeEEEEEeCC-CC---EEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCC----ce
Q 009965 364 NIIGSSPDSLVYKGTMKG-GP---EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF----TR 435 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~-~~---~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~----~~ 435 (521)
+.||+|+||.||+|+... +. .||||.+..... .....+++.+|+.++.+++||||+++++++...... ..
T Consensus 29 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 106 (323)
T 3qup_A 29 RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII--ASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIP 106 (323)
T ss_dssp EEEEEETTEEEEEEEC-------CEEEEEEC--------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CE
T ss_pred ceecccCCeEEEEEEEcccCCcceeEEEEEeccccc--CHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCcc
Confidence 789999999999998864 32 799999854321 223456799999999999999999999999876511 13
Q ss_pred EEEEecCCCCChhhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCch
Q 009965 436 MLVFDYASNGTLYEHLHYG----ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCL 511 (521)
Q Consensus 436 ~lv~ey~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGl 511 (521)
++||||+++|+|.+++... ....+++.++..|+.|+++||+|||+. +|+||||||+|||+++++.+||+|||+
T Consensus 107 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl~Dfg~ 183 (323)
T 3qup_A 107 MVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGL 183 (323)
T ss_dssp EEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC
T ss_pred EEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEEeeccc
Confidence 8999999999999998632 122589999999999999999999999 999999999999999999999999999
Q ss_pred hhhccc
Q 009965 512 SFLLVS 517 (521)
Q Consensus 512 a~~~~~ 517 (521)
++.+..
T Consensus 184 a~~~~~ 189 (323)
T 3qup_A 184 SRKIYS 189 (323)
T ss_dssp ------
T ss_pred cccccc
Confidence 987543
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-24 Score=210.79 Aligned_cols=143 Identities=16% Similarity=0.153 Sum_probs=126.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. ++..+|+|++..... ...+.+.+|++++.+++||||+++++++.+.. ..++||||+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 88 (277)
T 3f3z_A 15 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV----EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNT--DIYLVMELC 88 (277)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC----SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred eEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc----chHHHHHHHHHHHHhCCCCCEeeEEEEEecCC--eEEEEEecc
Confidence 78999999999999987 577899999854322 22457899999999999999999999998876 799999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee---cCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL---TEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLl---d~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.... .+++.++..|+.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++.+.+
T Consensus 89 ~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~ 161 (277)
T 3f3z_A 89 TGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP 161 (277)
T ss_dssp CSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT
T ss_pred CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceeccC
Confidence 9999999986433 489999999999999999999999 99999999999999 7889999999999976543
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-24 Score=224.91 Aligned_cols=150 Identities=15% Similarity=0.195 Sum_probs=124.1
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccc----cchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH----WTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~----~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 432 (521)
++|. +.||+|+||.||+|... +++.||||++..+... ........+.+|+.++.+++||||+++++++...
T Consensus 135 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-- 212 (419)
T 3i6u_A 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE-- 212 (419)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS--
T ss_pred ccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC--
Confidence 4454 78999999999999986 6899999998654311 0111223588999999999999999999998654
Q ss_pred CceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCC---CCeeeCCC
Q 009965 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED---FSPKVSPL 509 (521)
Q Consensus 433 ~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~---~~~kl~Df 509 (521)
..++||||+++|+|.+++... ..+++.++..|+.|++.||+|||+. +|+||||||+|||++.+ +.+||+||
T Consensus 213 -~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~DF 286 (419)
T 3i6u_A 213 -DYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDF 286 (419)
T ss_dssp -EEEEEEECCTTCBGGGGTSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECCS
T ss_pred -ceEEEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEeec
Confidence 579999999999999998644 3589999999999999999999999 99999999999999654 45999999
Q ss_pred chhhhccc
Q 009965 510 CLSFLLVS 517 (521)
Q Consensus 510 Gla~~~~~ 517 (521)
|+++.+..
T Consensus 287 G~a~~~~~ 294 (419)
T 3i6u_A 287 GHSKILGE 294 (419)
T ss_dssp STTTSCC-
T ss_pred ccceecCC
Confidence 99987654
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=99.91 E-value=2.4e-24 Score=209.26 Aligned_cols=143 Identities=20% Similarity=0.272 Sum_probs=127.6
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|.+..... ....+.+.+|+.++..++||||+++++++.+.+ ..++||||+
T Consensus 13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 87 (276)
T 2yex_A 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA---VDCPENIKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYC 87 (276)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC---TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred EEeecCCCcEEEEEEECCCCcEEEEEEeeeccc---hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCC--EEEEEEEec
Confidence 78999999999999987 789999999854322 233567899999999999999999999998876 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++... ..+++..+..++.|+++||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 88 ~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 156 (276)
T 2yex_A 88 SGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (276)
T ss_dssp TTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred CCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccC
Confidence 999999999643 3589999999999999999999999 99999999999999999999999999997653
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.6e-25 Score=220.07 Aligned_cols=144 Identities=22% Similarity=0.283 Sum_probs=121.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCE----EEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPE----IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~----vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||+|++. ++.. ||+|.+.... .....+.+.+|+.++.+++||||+++++++.+. ..++|
T Consensus 19 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~~v 92 (325)
T 3kex_A 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS---GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGS---SLQLV 92 (325)
T ss_dssp EEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT---SCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBS---SEEEE
T ss_pred eeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc---cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC---ccEEE
Confidence 78999999999999986 4554 6666653221 112234578899999999999999999999753 58999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
|||+++|+|.+++... ...+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+..
T Consensus 93 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 93 TQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp EECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred EEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 9999999999999743 34689999999999999999999999 999999999999999999999999999997643
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.2e-24 Score=211.78 Aligned_cols=145 Identities=13% Similarity=0.141 Sum_probs=128.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. +++.+|+|.+.... .......+.+.+|+.++++++||||+++++++.+.+ ..++||||+
T Consensus 21 ~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 97 (294)
T 2rku_A 21 RFLGKGGFAKCFEISDADTKEVFAGKIVPKSL-LLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND--FVFVVLELC 97 (294)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGG-CCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred EEEeecCCEEEEEEEECCCCceEEEEEechhh-ccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC--EEEEEEecC
Confidence 78999999999999987 57889999885432 122344567899999999999999999999998876 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++.... .+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 98 ~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 166 (294)
T 2rku_A 98 RRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 166 (294)
T ss_dssp TTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence 9999999986433 589999999999999999999999 99999999999999999999999999998654
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=99.91 E-value=2e-25 Score=222.06 Aligned_cols=150 Identities=19% Similarity=0.318 Sum_probs=128.1
Q ss_pred Hhhhh--chhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecC
Q 009965 359 CEDFS--NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430 (521)
Q Consensus 359 ~~~~~--~~ig~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 430 (521)
.++|. +.||+|+||.||+|+.. ++..||+|.+.... ......++.+|+.++.+++||||+++++++.+.
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 100 (322)
T 1p4o_A 24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 100 (322)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS---CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc---CHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccC
Confidence 34454 88999999999999875 36789999884321 223456799999999999999999999999877
Q ss_pred CCCceEEEEecCCCCChhhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCC
Q 009965 431 SPFTRMLVFDYASNGTLYEHLHYGE--------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF 502 (521)
Q Consensus 431 ~~~~~~lv~ey~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~ 502 (521)
+ ..++||||+++|+|.+++.... ...+++..+.+++.|++.||+|||+. +|+||||||+||++++++
T Consensus 101 ~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~ 175 (322)
T 1p4o_A 101 Q--PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDF 175 (322)
T ss_dssp S--SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTC
T ss_pred C--ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCC
Confidence 6 7899999999999999986321 23579999999999999999999999 999999999999999999
Q ss_pred CeeeCCCchhhhcc
Q 009965 503 SPKVSPLCLSFLLV 516 (521)
Q Consensus 503 ~~kl~DfGla~~~~ 516 (521)
.+||+|||+++...
T Consensus 176 ~~kl~Dfg~~~~~~ 189 (322)
T 1p4o_A 176 TVKIGDFGMTRDIY 189 (322)
T ss_dssp CEEECCTTCCCGGG
T ss_pred eEEECcCccccccc
Confidence 99999999998654
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-24 Score=212.38 Aligned_cols=145 Identities=15% Similarity=0.180 Sum_probs=125.5
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. ++..+|+|++..... ....+.+.+|++++.+++||||+++++++.+.. ..++||||+
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~ 102 (285)
T 3is5_A 28 RKLGSGAFGDVHLVEERSSGLERVIKTINKDRS---QVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYH--NMYIVMETC 102 (285)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC---CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred ceeccCCCeEEEEEEEccCCceEEEEEeecccc---chhHHHHHHHHHHHHhCCCchHHhHHHheecCC--eEEEEEEeC
Confidence 89999999999999986 688999999854332 223467899999999999999999999998876 799999999
Q ss_pred CCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee---cCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL---TEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLl---d~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++... ....+++..+..|+.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++.+.
T Consensus 103 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 103 EGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp SCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 999999998532 234589999999999999999999999 99999999999999 456889999999998654
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=9.1e-25 Score=213.13 Aligned_cols=144 Identities=16% Similarity=0.230 Sum_probs=117.2
Q ss_pred chhCcCCCeeEEEEEeCC----CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||.||+|+... +..||+|.+... ......+.+.+|+.++.+++||||+++++++.+. ..++||
T Consensus 21 ~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~lv~ 94 (281)
T 1mp8_A 21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC---TSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN---PVWIIM 94 (281)
T ss_dssp EEEEECSSSEEEEEEECCC--CCEEEEEEECTTT---TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS---SCEEEE
T ss_pred eEeeecCCeeEEEEEEecCCCCceEEEEEecccc---CCHHHHHHHHHHHHHHHhCCCCccceEEEEEccC---ccEEEE
Confidence 789999999999998853 346888886422 1234456799999999999999999999998543 579999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++.+..
T Consensus 95 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (281)
T 1mp8_A 95 ELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 168 (281)
T ss_dssp ECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred ecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccCc
Confidence 9999999999997433 3589999999999999999999999 999999999999999999999999999987653
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-24 Score=212.43 Aligned_cols=143 Identities=19% Similarity=0.304 Sum_probs=124.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecC------------
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES------------ 430 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------------ 430 (521)
+.||+|+||.||+|+.. +++.||+|.+.... +.+.+|++++.+++||||+++++++...
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~ 88 (284)
T 2a19_B 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN--------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSS 88 (284)
T ss_dssp EEEECSSSCCEEEEEETTTCCEEEEEEEECCS--------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------
T ss_pred eeeccCCceEEEEEEEcCCCeEEEEEEecccc--------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccccc
Confidence 78999999999999997 78999999985432 2467899999999999999999988541
Q ss_pred --CCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCC
Q 009965 431 --SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSP 508 (521)
Q Consensus 431 --~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~D 508 (521)
.....++||||+++|+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|
T Consensus 89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~D 165 (284)
T 2a19_B 89 RSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGD 165 (284)
T ss_dssp CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECC
T ss_pred ccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCEEECc
Confidence 111479999999999999999754445699999999999999999999999 999999999999999999999999
Q ss_pred Cchhhhccc
Q 009965 509 LCLSFLLVS 517 (521)
Q Consensus 509 fGla~~~~~ 517 (521)
||+++.+..
T Consensus 166 fg~~~~~~~ 174 (284)
T 2a19_B 166 FGLVTSLKN 174 (284)
T ss_dssp CTTCEESSC
T ss_pred chhheeccc
Confidence 999887643
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.2e-24 Score=216.06 Aligned_cols=145 Identities=13% Similarity=0.141 Sum_probs=128.2
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. +++.+|+|.+.... .......+.+.+|+.++.+++||||+++++++.+.+ ..++||||+
T Consensus 47 ~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 123 (335)
T 2owb_A 47 RFLGKGGFAKCFEISDADTKEVFAGKIVPKSL-LLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND--FVFVVLELC 123 (335)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGG-CCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEechhh-hcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--eEEEEEecC
Confidence 78999999999999987 57889999885432 222344567899999999999999999999998876 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++.... .+++.++..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 124 ~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 124 RRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192 (335)
T ss_dssp TTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred CCCCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence 9999999986433 589999999999999999999999 99999999999999999999999999998654
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-24 Score=211.30 Aligned_cols=148 Identities=20% Similarity=0.202 Sum_probs=126.5
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. +++.||+|.+..... .....+.+.+|+.++.+++||||+++++++.+......++||||+
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~ 89 (279)
T 2w5a_A 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM--TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89 (279)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECC
T ss_pred hhccCCCCcEEEEEEECCCCcEEEEEEEEcccC--CHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCC
Confidence 78999999999999986 789999999854322 234456799999999999999999999988643323789999999
Q ss_pred CCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC-----eEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 443 SNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPP-----FTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 443 ~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-----ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
++|+|.+++... ....+++..+..|+.|++.||+|||+. + |+||||||+||++++++.+||+|||+++.+
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~ 166 (279)
T 2w5a_A 90 EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166 (279)
T ss_dssp TTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCCHHHHC
T ss_pred CCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCchheee
Confidence 999999999642 234589999999999999999999998 6 999999999999999999999999999876
Q ss_pred c
Q 009965 516 V 516 (521)
Q Consensus 516 ~ 516 (521)
.
T Consensus 167 ~ 167 (279)
T 2w5a_A 167 N 167 (279)
T ss_dssp -
T ss_pred c
Confidence 4
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=8.1e-25 Score=218.70 Aligned_cols=140 Identities=10% Similarity=0.110 Sum_probs=123.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|+.. +++.||||.+..+.. .+.+.+|+.++.++ +||||+++++++.... ..++||||
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~--~~~lv~e~ 86 (330)
T 2izr_A 15 KKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR------APQLHLEYRFYKQLGSGDGIPQVYYFGPCGK--YNAMVLEL 86 (330)
T ss_dssp EECCC-CTTSEEEEEETTTTEEEEEEEEETTCS------SCCHHHHHHHHHHHCSCTTSCCEEEEEEETT--EEEEEEEC
T ss_pred EEeeccCCceEEEEEECCCCcEEEEEEeccccc------hHHHHHHHHHHHHhhCCCCCCEEEEEEecCC--ccEEEEEe
Confidence 78999999999999975 788999998754321 23588999999999 9999999999998876 78999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCC-----eeeCCCchhhhcc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS-----PKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~-----~kl~DfGla~~~~ 516 (521)
+ +|+|.+++... ...+++.++..|+.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++.+.
T Consensus 87 ~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 87 L-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp C-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred C-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 9 89999999743 34699999999999999999999999 9999999999999998887 9999999998754
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-24 Score=217.18 Aligned_cols=145 Identities=20% Similarity=0.235 Sum_probs=126.3
Q ss_pred chhCcCCCeeEEEEEe-----CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEE
Q 009965 364 NIIGSSPDSLVYKGTM-----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~-----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||+|++ .++..||||++... .....+.+.+|++++.+++||||+++++++...+....++|
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 104 (327)
T 3lxl_A 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS----GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLV 104 (327)
T ss_dssp EEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC----CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEE
T ss_pred hhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC----CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEE
Confidence 7899999999999985 35788999998432 22345679999999999999999999999875443368999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|||+++|+|.+++.... ..+++.++..|+.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 105 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 178 (327)
T 3lxl_A 105 MEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLP 178 (327)
T ss_dssp EECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEECC
T ss_pred EeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceecc
Confidence 99999999999996422 3589999999999999999999998 99999999999999999999999999998654
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=99.91 E-value=2.7e-24 Score=209.71 Aligned_cols=146 Identities=21% Similarity=0.258 Sum_probs=128.0
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccc--cchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEe
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH--WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
+.||+|+||.||+|+.. +++.||+|.+...... ......+.+.+|+.++.+++||||+++++++.+.. ..++|||
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 88 (283)
T 3bhy_A 11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKT--DVVLILE 88 (283)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred HhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCC--eEEEEEe
Confidence 78999999999999997 6899999998654321 11123567999999999999999999999998876 7999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCC----CeeeCCCchhhhcc
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF----SPKVSPLCLSFLLV 516 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~----~~kl~DfGla~~~~ 516 (521)
|+++++|.+++... ..+++.++..++.|++.||+|||+. +++||||||+||++++++ .+||+|||+++.+.
T Consensus 89 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~ 163 (283)
T 3bhy_A 89 LVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE 163 (283)
T ss_dssp CCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC
T ss_pred ecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecccceecc
Confidence 99999999999643 3589999999999999999999999 999999999999998877 89999999998654
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-24 Score=224.65 Aligned_cols=146 Identities=17% Similarity=0.144 Sum_probs=125.5
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC---CceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP---FTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~---~~~~lv~ 439 (521)
+.||+|+||.||+|+.. +++.||||++.... ......+++.+|++++.+++||||+++++++..... ...++||
T Consensus 32 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~ 109 (432)
T 3n9x_A 32 HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF--EDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVL 109 (432)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEECSTT--TSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEE
T ss_pred EEEeecCCEEEEEEEECCCCcEEEEEEeCchh--cChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEE
Confidence 78999999999999986 67889999985322 223345679999999999999999999999976531 2689999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
||++ |+|.+++... ..+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+|+.+..
T Consensus 110 e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 181 (432)
T 3n9x_A 110 EIAD-SDLKKLFKTP--IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTINS 181 (432)
T ss_dssp ECCS-EEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC--
T ss_pred ecCC-cCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCcccccc
Confidence 9997 5999999643 3589999999999999999999999 999999999999999999999999999987653
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.1e-24 Score=214.07 Aligned_cols=142 Identities=20% Similarity=0.262 Sum_probs=123.2
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
++||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++.++ +||||+++++++.+.+ ..++||||
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~--~~~lv~e~ 92 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQP----GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEED--RFYLVFEK 92 (316)
T ss_dssp CCCCCCSSEEEEEEECSSSCCEEEEEEEECCS----SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred ceecCCceEEEEEEEEcCCCcEEEEEEEeeCc----chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC--EEEEEEEc
Confidence 57999999999999976 78999999985432 12346789999999985 7999999999998877 89999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCC---eeeCCCchhhhcc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS---PKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~---~kl~DfGla~~~~ 516 (521)
+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+|||++.++. +||+|||+++.+.
T Consensus 93 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 165 (316)
T 2ac3_A 93 MRGGSILSHIHKRR--HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK 165 (316)
T ss_dssp CTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---
T ss_pred CCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccccc
Confidence 99999999996443 589999999999999999999999 9999999999999998776 9999999987653
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-24 Score=216.67 Aligned_cols=144 Identities=26% Similarity=0.358 Sum_probs=122.2
Q ss_pred chhCcCCCeeEEEEEeCC-----CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEE
Q 009965 364 NIIGSSPDSLVYKGTMKG-----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~-----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||+|+... +..||+|.+.... ......++.+|+.++.+++||||+++++++...+ ..++|
T Consensus 50 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv 124 (333)
T 1mqb_A 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY---TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK--PMMII 124 (333)
T ss_dssp EEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SEEEE
T ss_pred cEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCC--CcEEE
Confidence 689999999999998753 2359999874321 2334567999999999999999999999998776 78999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|||+++|+|.+++.... ..+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 125 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 198 (333)
T 1mqb_A 125 TEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 198 (333)
T ss_dssp EECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred EeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhc
Confidence 99999999999997432 3589999999999999999999999 99999999999999999999999999998764
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.91 E-value=2e-24 Score=212.21 Aligned_cols=145 Identities=22% Similarity=0.305 Sum_probs=124.0
Q ss_pred chhCcCCCeeEEEEEeCC-CC---EEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMKG-GP---EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~-~~---~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
++||+|+||.||+|++.+ +. .+|+|.+.... .....+.+.+|+.++.+++||||+++++++.+.+. ..++|+
T Consensus 27 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~~v~ 102 (298)
T 3pls_A 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT---EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG-LPHVLL 102 (298)
T ss_dssp EEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC---SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS-CCEEEE
T ss_pred ceeccCCCceEEEEEEecCCCceeeeeeeeccccc---cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCC-CcEEEE
Confidence 789999999999998743 22 68999874321 22345679999999999999999999999976552 348999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
||+.+|+|.+++... ...+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 103 e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 175 (298)
T 3pls_A 103 PYMCHGDLLQFIRSP-QRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDIL 175 (298)
T ss_dssp CCCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred ecccCCCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence 999999999999743 34689999999999999999999999 99999999999999999999999999998653
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.6e-24 Score=215.12 Aligned_cols=144 Identities=17% Similarity=0.295 Sum_probs=125.0
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|++.... ......+.+.+|+.++.+++||||+++++++.+.. ..++||||+
T Consensus 31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 106 (331)
T 4aaa_A 31 GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD--DDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKK--RWYLVFEFV 106 (331)
T ss_dssp EEGGGGTTSSEEEEEETTTCCEEEEEEEESCS--SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred eEEeecCCEEEEEEEECCCCceEEEEEEecCC--CchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCC--EEEEEEecC
Confidence 78999999999999987 58999999985432 22344567889999999999999999999998877 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++++|.+++.... .+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 107 ~~~~l~~~~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 175 (331)
T 4aaa_A 107 DHTILDDLELFPN--GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLA 175 (331)
T ss_dssp SEEHHHHHHHSTT--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred CcchHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeec
Confidence 9999998875433 489999999999999999999999 99999999999999999999999999997654
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-24 Score=223.46 Aligned_cols=141 Identities=13% Similarity=0.143 Sum_probs=119.6
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhc-cCCCCccceeeEEec--CCCCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLAR-INHENTGKLLGYCRE--SSPFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~-l~H~niv~l~g~~~~--~~~~~~~lv~ 439 (521)
++||+|+||+||+++.. +++.||||++.. ...+.+|+.++.+ .+||||+++++++.. .+....++||
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~---------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~ 138 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD---------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVM 138 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC---------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCc---------chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEE
Confidence 57999999999999986 688999999842 1246788888754 489999999999864 1112689999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC---CCCeeeCCCchhhhcc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~---~~~~kl~DfGla~~~~ 516 (521)
||+++|+|.+++.......+++.++..|+.||+.||+|||+. +|+||||||+|||++. ++.+||+|||+++...
T Consensus 139 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~ 215 (400)
T 1nxk_A 139 ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215 (400)
T ss_dssp ECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred EeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccccccC
Confidence 999999999999865555699999999999999999999998 9999999999999997 7899999999998654
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3e-24 Score=209.51 Aligned_cols=145 Identities=21% Similarity=0.240 Sum_probs=126.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|... +++.||+|++..... .....+.+.+|+.++.+++||||+++++++...+ ..++||||+
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e~~ 87 (284)
T 3kk8_A 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIVRLHDSIQEES--FHYLVFDLV 87 (284)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred hhhcCcCCeEEEEEEEcCCCceEEEEEeecccC--CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCC--EEEEEEecC
Confidence 78999999999999986 688999999854432 2334567899999999999999999999998876 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCC---eeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS---PKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~---~kl~DfGla~~~~~ 517 (521)
++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++....
T Consensus 88 ~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 88 TGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 9999999886443 489999999999999999999999 9999999999999986655 99999999976543
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=99.91 E-value=4.2e-24 Score=216.66 Aligned_cols=152 Identities=21% Similarity=0.318 Sum_probs=130.9
Q ss_pred Hhhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeecccc----chhhHHHHHHHHHHHhcc-CCCCccceeeEEecC
Q 009965 359 CEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW----TGYLELYFQREVADLARI-NHENTGKLLGYCRES 430 (521)
Q Consensus 359 ~~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~----~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~ 430 (521)
..+|. +.||+|+||.||+|+.. +|+.||||++....... .....+.+.+|+.++.++ +||||+++++++...
T Consensus 93 ~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 172 (365)
T 2y7j_A 93 YQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESS 172 (365)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBS
T ss_pred hhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeC
Confidence 34454 78999999999999996 78999999985443211 122356788999999999 899999999999887
Q ss_pred CCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCc
Q 009965 431 SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLC 510 (521)
Q Consensus 431 ~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfG 510 (521)
. ..++||||+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||
T Consensus 173 ~--~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~DfG 245 (365)
T 2y7j_A 173 S--FMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFG 245 (365)
T ss_dssp S--EEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred C--EEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEecC
Confidence 6 899999999999999999643 3489999999999999999999999 99999999999999999999999999
Q ss_pred hhhhccc
Q 009965 511 LSFLLVS 517 (521)
Q Consensus 511 la~~~~~ 517 (521)
+++.+..
T Consensus 246 ~~~~~~~ 252 (365)
T 2y7j_A 246 FSCHLEP 252 (365)
T ss_dssp TCEECCT
T ss_pred cccccCC
Confidence 9887653
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=99.91 E-value=3.6e-24 Score=209.80 Aligned_cols=147 Identities=23% Similarity=0.215 Sum_probs=125.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCC--CCceEEEEe
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS--PFTRMLVFD 440 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~--~~~~~lv~e 440 (521)
+.||+|+||.||+|... ++..||+|.+.... ......+.+.+|+.++.+++||||+++++++.... ....++|||
T Consensus 32 ~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e 109 (290)
T 1t4h_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRK--LTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE 109 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGG--SCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEE
T ss_pred eeccCCCCeEEEEeEecCCceEEEEEEecchh--hCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEE
Confidence 67999999999999986 67889999885432 22344677999999999999999999999986531 225899999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEecCCCCCCeeec-CCCCeeeCCCchhhhccc
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP--FTISELNSSAVYLT-EDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivH~Dlk~~NiLld-~~~~~kl~DfGla~~~~~ 517 (521)
|+++|+|.+++... ..+++..+..|+.+++.||+|||+. + |+||||||+|||++ +++.+||+|||+++....
T Consensus 110 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~ 184 (290)
T 1t4h_A 110 LMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp CCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred ecCCCCHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccc
Confidence 99999999999643 3489999999999999999999998 6 99999999999998 789999999999976543
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.4e-24 Score=213.93 Aligned_cols=147 Identities=18% Similarity=0.173 Sum_probs=128.0
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|+.. +++.||+|++...... .....++.+|+.++.++ +||||+++++++.+.. ..++||||
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~--~~~lv~e~ 110 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRG--QDCRAEILHEIAVLELAKSCPRVINLHEVYENTS--EIILILEY 110 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETT--EECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEEEC
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcc--hHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCC--eEEEEEEe
Confidence 68999999999999987 6899999998644322 23356789999999999 5699999999998877 89999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC---CCCeeeCCCchhhhccc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~---~~~~kl~DfGla~~~~~ 517 (521)
+++|+|.+++.......+++.++..|+.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++.+..
T Consensus 111 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 186 (327)
T 3lm5_A 111 AAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGH 186 (327)
T ss_dssp CTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC--
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEeeCccccccCC
Confidence 9999999999765556799999999999999999999999 9999999999999987 78999999999987643
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=99.91 E-value=7.5e-25 Score=221.55 Aligned_cols=156 Identities=17% Similarity=0.115 Sum_probs=131.9
Q ss_pred cCHHHHHHHHhhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-----CCCcc
Q 009965 350 FSRQELEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-----HENTG 421 (521)
Q Consensus 350 ~~~~~l~~~~~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----H~niv 421 (521)
+++.+.....++|. +.||+|+||.||+|+.. +++.||||++... ....+.+..|+.++.+++ ||||+
T Consensus 25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~h~~iv 99 (360)
T 3llt_A 25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-----KKYTRSAKIEADILKKIQNDDINNNNIV 99 (360)
T ss_dssp CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-----HHHHHHHHHHHHHHHHTCCCSTTGGGBC
T ss_pred eeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-----hhhhhhhHHHHHHHHHhcccCCCCCCee
Confidence 33333333445565 88999999999999985 7889999998421 223456788999999996 99999
Q ss_pred ceeeEEecCCCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC-
Q 009965 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE- 500 (521)
Q Consensus 422 ~l~g~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~- 500 (521)
++++++...+ ..++||||+ +|+|.+++.......+++.++..|+.|++.||+|||+. +|+||||||+|||+++
T Consensus 100 ~~~~~~~~~~--~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~ 173 (360)
T 3llt_A 100 KYHGKFMYYD--HMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDP 173 (360)
T ss_dssp CEEEEEEETT--EEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCT
T ss_pred cccceeeECC--eeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccc
Confidence 9999998877 899999999 88999999866555699999999999999999999999 9999999999999975
Q ss_pred ------------------------CCCeeeCCCchhhhcc
Q 009965 501 ------------------------DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 501 ------------------------~~~~kl~DfGla~~~~ 516 (521)
++.+||+|||+++...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~ 213 (360)
T 3llt_A 174 YFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKS 213 (360)
T ss_dssp TCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETT
T ss_pred cccccccchhcccccccccccccCCCCEEEEeccCceecC
Confidence 7899999999998654
|
| >2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... | Back alignment and structure |
|---|
Probab=99.91 E-value=2.6e-24 Score=211.58 Aligned_cols=145 Identities=20% Similarity=0.271 Sum_probs=125.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||||.+..... .....+.+.+|+.++.+++||||+++++++...+ ..++||||+
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 84 (299)
T 2r3i_A 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE--TEGVPSTAIREISLLKELNHPNIVKLLDVIHTEN--KLYLVFEFL 84 (299)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEC----------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred hhhccCCCeeEEEEEEcCCCceEEEEEeecCcc--chhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCC--ceEEEEEcc
Confidence 78999999999999987 789999999854321 1223457889999999999999999999998877 799999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+ |+|.+++.......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 85 ~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 154 (299)
T 2r3i_A 85 H-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154 (299)
T ss_dssp S-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHC
T ss_pred c-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhcc
Confidence 8 6999999765555689999999999999999999999 99999999999999999999999999998764
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.91 E-value=3.1e-24 Score=209.99 Aligned_cols=143 Identities=22% Similarity=0.283 Sum_probs=124.9
Q ss_pred chhCcCCCeeEEEEEeC---CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEe
Q 009965 364 NIIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
..||+|+||.||+|++. ++..||+|.+.... .....+++.+|++++.+++||||+++++++... ..++|||
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~lv~e 89 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE---ALMLVME 89 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESS---SEEEEEE
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCcc---chhHHHHHHHHHHHHHhCCCCCEeEEEEEecCC---CcEEEEE
Confidence 48999999999999864 56789999985431 233456799999999999999999999999543 5899999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 90 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~ 161 (287)
T 1u59_A 90 MAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALG 161 (287)
T ss_dssp CCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred eCCCCCHHHHHHhC-CccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeec
Confidence 99999999999633 34699999999999999999999999 99999999999999999999999999998764
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.5e-24 Score=212.41 Aligned_cols=149 Identities=19% Similarity=0.186 Sum_probs=126.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||++... ++..||+|.+............+.+.+|+.++.+++||||+++++++........++||||+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~ 90 (305)
T 2wtk_C 11 DLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYC 90 (305)
T ss_dssp CEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEECC
T ss_pred eEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehhc
Confidence 78999999999999986 68899999985443222223456799999999999999999999998644333789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++| |.+++.......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 91 ~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~ 160 (305)
T 2wtk_C 91 VCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALH 160 (305)
T ss_dssp SEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred cCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccccC
Confidence 976 77777655455699999999999999999999999 99999999999999999999999999998754
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-24 Score=218.27 Aligned_cols=150 Identities=19% Similarity=0.218 Sum_probs=123.4
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccc-cchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCce
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH-WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~-~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 435 (521)
.+|. +.||+|+||.||+|+.. +|+.||||++...... ......+.+.+|+.++.+++||||+++++++.+.+ ..
T Consensus 10 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~ 87 (346)
T 1ua2_A 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS--NI 87 (346)
T ss_dssp ---CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT--CC
T ss_pred cccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC--ce
Confidence 4444 78999999999999986 6899999998543211 11122346889999999999999999999998776 78
Q ss_pred EEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 436 ~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
++||||+++ +|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++.+
T Consensus 88 ~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDN-SLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp EEEEECCSE-EHHHHHTTC-CSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred EEEEEcCCC-CHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 999999986 899888643 34588999999999999999999999 9999999999999999999999999999876
Q ss_pred c
Q 009965 516 V 516 (521)
Q Consensus 516 ~ 516 (521)
.
T Consensus 163 ~ 163 (346)
T 1ua2_A 163 G 163 (346)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-24 Score=216.65 Aligned_cols=143 Identities=22% Similarity=0.293 Sum_probs=119.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEE----EEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEI----AVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~v----avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||+|+.. +++.+ |+|.+... ......+++.+|+.++.+++||||+++++++... ..++|
T Consensus 21 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~---~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~---~~~~v 94 (327)
T 3lzb_A 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLI 94 (327)
T ss_dssp EEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCC---SSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS---SEEEE
T ss_pred EEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccc---cCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC---CceEE
Confidence 78999999999999975 55555 55554321 1223456799999999999999999999999875 47899
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+||+++|+|.+++.... ..+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 95 ~~~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~ 168 (327)
T 3lzb_A 95 TQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp ECCCSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred EEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence 99999999999997433 3589999999999999999999999 99999999999999999999999999998764
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.8e-24 Score=214.36 Aligned_cols=145 Identities=21% Similarity=0.299 Sum_probs=125.1
Q ss_pred chhCcCCCeeEEEEEe-----CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEE
Q 009965 364 NIIGSSPDSLVYKGTM-----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~-----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||++++ .+++.||||++... .....+.+.+|+.++.+++||||+++++++...+....++|
T Consensus 47 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 122 (326)
T 2w1i_A 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLI 122 (326)
T ss_dssp EEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC----CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEE
T ss_pred eeeccCCCeEEEEEEeccccCCCceEEEEEEeccC----CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEE
Confidence 7899999999999985 35789999998532 22345679999999999999999999999876543367999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|||+++|+|.+++.... ..+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 123 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 123 MEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp ECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 99999999999997443 3589999999999999999999998 99999999999999999999999999998764
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-24 Score=217.06 Aligned_cols=145 Identities=20% Similarity=0.300 Sum_probs=125.4
Q ss_pred chhCcCCCeeEEEEEeCC-C-----CEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceE
Q 009965 364 NIIGSSPDSLVYKGTMKG-G-----PEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~-~-----~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 436 (521)
+.||+|+||.||+|+... + ..||+|.+.... .....+.+.+|+.++.++ +||||+++++++...+ ..+
T Consensus 52 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~--~~~ 126 (333)
T 2i1m_A 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA---HADEKEALMSELKIMSHLGQHENIVNLLGACTHGG--PVL 126 (333)
T ss_dssp EEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCE
T ss_pred eEeccCCCcceEEEEecCCCcccchhHHHHHhccccc---ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC--ceE
Confidence 789999999999999753 3 479999874322 223456799999999999 8999999999998876 789
Q ss_pred EEEecCCCCChhhhhccCC------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCe
Q 009965 437 LVFDYASNGTLYEHLHYGE------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSP 504 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~ 504 (521)
+||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+
T Consensus 127 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~ 203 (333)
T 2i1m_A 127 VITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVA 203 (333)
T ss_dssp EEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGGGEE
T ss_pred EEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCCCeE
Confidence 9999999999999986321 23589999999999999999999999 99999999999999999999
Q ss_pred eeCCCchhhhcc
Q 009965 505 KVSPLCLSFLLV 516 (521)
Q Consensus 505 kl~DfGla~~~~ 516 (521)
||+|||+++.+.
T Consensus 204 kl~Dfg~~~~~~ 215 (333)
T 2i1m_A 204 KIGDFGLARDIM 215 (333)
T ss_dssp EBCCCGGGCCGG
T ss_pred EECccccccccc
Confidence 999999998654
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.9e-24 Score=217.39 Aligned_cols=147 Identities=12% Similarity=0.123 Sum_probs=128.2
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccch-------------hhHHHHHHHHHHHhccCCCCccceeeEEecC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTG-------------YLELYFQREVADLARINHENTGKLLGYCRES 430 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~-------------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 430 (521)
+.||+|+||.||+|+. +++.||+|.+......... ...+.+.+|+.++.+++||||+++++++.+.
T Consensus 37 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 115 (348)
T 2pml_X 37 RTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNY 115 (348)
T ss_dssp EEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEESS
T ss_pred EEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEeeC
Confidence 7899999999999999 8899999998543211100 1116799999999999999999999999887
Q ss_pred CCCceEEEEecCCCCChhhh------hccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeEecCCCCCCeeecCCCC
Q 009965 431 SPFTRMLVFDYASNGTLYEH------LHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTEDFS 503 (521)
Q Consensus 431 ~~~~~~lv~ey~~~gsL~~~------l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlk~~NiLld~~~~ 503 (521)
+ ..++||||+++|+|.++ +.......+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.
T Consensus 116 ~--~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~~~~~~ 190 (348)
T 2pml_X 116 D--EVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILMDKNGR 190 (348)
T ss_dssp S--EEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEECTTSC
T ss_pred C--eEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEEcCCCc
Confidence 7 89999999999999999 654335679999999999999999999998 7 9999999999999999999
Q ss_pred eeeCCCchhhhcc
Q 009965 504 PKVSPLCLSFLLV 516 (521)
Q Consensus 504 ~kl~DfGla~~~~ 516 (521)
+||+|||+++...
T Consensus 191 ~kl~dfg~~~~~~ 203 (348)
T 2pml_X 191 VKLSDFGESEYMV 203 (348)
T ss_dssp EEECCCTTCEECB
T ss_pred EEEeccccccccc
Confidence 9999999998754
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=99.91 E-value=3.2e-24 Score=210.98 Aligned_cols=148 Identities=20% Similarity=0.257 Sum_probs=127.3
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCC-----
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----- 431 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----- 431 (521)
++|. +.||+|+||.||+|+.. +++.||||.+... ....+.+.+|+.++.+++||||+++++++.+..
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (303)
T 1zy4_A 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-----EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKP 80 (303)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-
T ss_pred ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-----HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhh
Confidence 4454 78999999999999986 7899999998432 223467899999999999999999999986521
Q ss_pred ------CCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCee
Q 009965 432 ------PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPK 505 (521)
Q Consensus 432 ------~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~k 505 (521)
....++||||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+|
T Consensus 81 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~k 156 (303)
T 1zy4_A 81 MTAVKKKSTLFIQMEYCENGTLYDLIHSE-NLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVK 156 (303)
T ss_dssp -----CEEEEEEEEECCCSCBHHHHHHHS-CGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEE
T ss_pred hcccccCCceEEEEecCCCCCHHHhhhcc-ccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEE
Confidence 12679999999999999999743 23578999999999999999999999 999999999999999999999
Q ss_pred eCCCchhhhcc
Q 009965 506 VSPLCLSFLLV 516 (521)
Q Consensus 506 l~DfGla~~~~ 516 (521)
|+|||+++.+.
T Consensus 157 l~dfg~~~~~~ 167 (303)
T 1zy4_A 157 IGDFGLAKNVH 167 (303)
T ss_dssp ECCCCCCSCTT
T ss_pred EeeCcchhhcc
Confidence 99999998654
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=99.91 E-value=2.5e-24 Score=210.32 Aligned_cols=145 Identities=17% Similarity=0.220 Sum_probs=126.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. ++..||+|.+..... ......+.+.+|++++.+++||||+++++++.+.+ ..++||||+
T Consensus 20 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 96 (284)
T 2vgo_A 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQL-EKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRK--RIYLMLEFA 96 (284)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred heecCCCCeEEEEEEEcCCCcEEEEEEEccccc-chHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCC--EEEEEEEeC
Confidence 78999999999999987 577899999854321 11223467899999999999999999999998876 889999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 97 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 165 (284)
T 2vgo_A 97 PRGELYKELQKHG--RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP 165 (284)
T ss_dssp TTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence 9999999996443 489999999999999999999998 99999999999999999999999999986543
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.5e-24 Score=224.71 Aligned_cols=146 Identities=20% Similarity=0.270 Sum_probs=128.6
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||||++...... .....+.+.+|+.++.+++||||+++++++.+.. ..++||||+
T Consensus 32 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e~~ 108 (484)
T 3nyv_A 32 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVK-QKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKG--YFYLVGEVY 108 (484)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-BSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred eEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcc-cchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEEEEEecC
Confidence 78999999999999987 7899999998543211 1234567999999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee---cCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL---TEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLl---d~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.... .+++..+..|+.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++.+..
T Consensus 109 ~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 109 TGGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp CSCBHHHHHHTCS--CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 9999999996443 489999999999999999999999 99999999999999 5678999999999987654
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=99.91 E-value=2.7e-24 Score=210.75 Aligned_cols=142 Identities=28% Similarity=0.429 Sum_probs=118.0
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|+..+ .||+|.+..... .....+.|.+|+.++.+++||||+++++++... ..++||||++
T Consensus 30 ~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~lv~e~~~ 102 (289)
T 3og7_A 30 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAP--TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP---QLAIVTQWCE 102 (289)
T ss_dssp EEEEECSSEEEEEEESSS--EEEEEEESCSSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS---SCEEEEECCC
T ss_pred eEecCCCCeEEEEEEEcC--ceEEEEEeccCC--CHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCC---ccEEEEEecC
Confidence 789999999999998754 599999854332 234456799999999999999999999987543 5799999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+|+|.+++... ...+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 103 ~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 171 (289)
T 3og7_A 103 GSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS 171 (289)
T ss_dssp EEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC------
T ss_pred CCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccc
Confidence 99999999643 34689999999999999999999999 99999999999999999999999999998654
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=99.91 E-value=2.1e-24 Score=218.28 Aligned_cols=144 Identities=17% Similarity=0.199 Sum_probs=127.2
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. ++..||+|++.... .....+.+.+|+.++.+++||||+++++++...+ ..++||||+
T Consensus 39 ~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 113 (360)
T 3eqc_A 39 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG--EISICMEHM 113 (360)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEECCC---CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETT--EEEEEECCC
T ss_pred eeecCCCCeEEEEEEECCCCcEEEEEEecccc---CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECC--EEEEEEECC
Confidence 78999999999999987 68899999985432 2344567999999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.... .+++..+..|+.+++.||+|||+.+ +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 114 ~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 183 (360)
T 3eqc_A 114 DGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 183 (360)
T ss_dssp TTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHH
T ss_pred CCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccc
Confidence 9999999996443 4899999999999999999999831 79999999999999999999999999987653
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=99.91 E-value=3.8e-24 Score=214.89 Aligned_cols=142 Identities=18% Similarity=0.209 Sum_probs=121.7
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCce
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 435 (521)
++|. +.||+|+||.||+|+.. +++.||+|.+..... .+.+|++++.++ +||||+++++++.+.. ..
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~--~~ 91 (342)
T 2qr7_A 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR--------DPTEEIEILLRYGQHPNIITLKDVYDDGK--YV 91 (342)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC--------CCHHHHHHHHHHTTSTTBCCEEEEEECSS--EE
T ss_pred ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC--------ChHHHHHHHHHhcCCCCcCeEEEEEEcCC--EE
Confidence 4454 78999999999999987 688999999853321 235688888888 7999999999998877 89
Q ss_pred EEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCC----CCeeeCCCch
Q 009965 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED----FSPKVSPLCL 511 (521)
Q Consensus 436 ~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~----~~~kl~DfGl 511 (521)
++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||+.++ +.+||+|||+
T Consensus 92 ~lv~E~~~gg~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~ 166 (342)
T 2qr7_A 92 YVVTELMKGGELLDKILRQK--FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGF 166 (342)
T ss_dssp EEEECCCCSCBHHHHHHTCT--TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTT
T ss_pred EEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCC
Confidence 99999999999999996443 589999999999999999999999 99999999999998443 3599999999
Q ss_pred hhhcc
Q 009965 512 SFLLV 516 (521)
Q Consensus 512 a~~~~ 516 (521)
++.+.
T Consensus 167 a~~~~ 171 (342)
T 2qr7_A 167 AKQLR 171 (342)
T ss_dssp CEECB
T ss_pred cccCc
Confidence 98764
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=4e-24 Score=214.90 Aligned_cols=142 Identities=15% Similarity=0.148 Sum_probs=124.5
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCC--CCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH--ENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||++...+++.||||++.... ......+.+.+|+.++.+++| |||+++++++.... ..++||||
T Consensus 15 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~--~~~lv~e~ 90 (343)
T 3dbq_A 15 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE--ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIYMVMEC 90 (343)
T ss_dssp EEESCCSSEEEEEEECTTSCEEEEEEEECTT--CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEECC
T ss_pred EEEecCCCeEEEEEEeCCCCEEEEEEeeccc--cchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCC--EEEEEEeC
Confidence 7899999999999999889999999985432 223445679999999999987 99999999999877 89999995
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
.+|+|.+++.... .+++.++..|+.|+++||+|||+. +|+||||||+|||++ ++.+||+|||+++.+.
T Consensus 91 -~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 91 -GNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp -CSEEHHHHHHHSC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred -CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccC
Confidence 5789999997543 589999999999999999999999 999999999999997 5789999999998764
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2e-24 Score=215.73 Aligned_cols=147 Identities=18% Similarity=0.244 Sum_probs=122.1
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceE
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
++|. +.||+|+||+||+|+.. +++.||||++..... .....+.+.+|+.++.+++||||+++++++.+.. ..+
T Consensus 34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~ 109 (329)
T 3gbz_A 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE--EEGVPGTAIREVSLLKELQHRNIIELKSVIHHNH--RLH 109 (329)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC----------CHHHHHHGGGCCCTTBCCEEEEEEETT--EEE
T ss_pred hhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccc--ccccchhHHHHHHHHHHcCCCCcceEEEEEecCC--EEE
Confidence 4454 78999999999999876 788999999854322 2233456789999999999999999999998877 899
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee-----cCCCCeeeCCCch
Q 009965 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL-----TEDFSPKVSPLCL 511 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLl-----d~~~~~kl~DfGl 511 (521)
+||||++ |+|.+++.... .+++..+..|+.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||+
T Consensus 110 lv~e~~~-~~L~~~~~~~~--~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~ 183 (329)
T 3gbz_A 110 LIFEYAE-NDLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183 (329)
T ss_dssp EEEECCS-EEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred EEEecCC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence 9999998 49999997544 489999999999999999999999 99999999999999 4555699999999
Q ss_pred hhhcc
Q 009965 512 SFLLV 516 (521)
Q Consensus 512 a~~~~ 516 (521)
++.+.
T Consensus 184 a~~~~ 188 (329)
T 3gbz_A 184 ARAFG 188 (329)
T ss_dssp HHHHC
T ss_pred ccccC
Confidence 98764
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.9e-24 Score=207.83 Aligned_cols=146 Identities=19% Similarity=0.259 Sum_probs=128.5
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|.+..... ......+.+.+|+.++..++||||+++++++...+ ..++||||+
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 93 (276)
T 2h6d_A 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKI-RSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT--DFFMVMEYV 93 (276)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred eeecCCCCeEEEEEEECCCCceEEEEEeccccc-cchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC--eEEEEEecc
Confidence 78999999999999987 789999999854321 11223467899999999999999999999998876 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++++|.+++.... .+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||+++....
T Consensus 94 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 163 (276)
T 2h6d_A 94 SGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163 (276)
T ss_dssp CSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred CCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCC
Confidence 9999999996443 489999999999999999999999 999999999999999999999999999987643
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=99.91 E-value=8e-25 Score=222.96 Aligned_cols=148 Identities=13% Similarity=0.093 Sum_probs=119.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHH---HHHhccCCCCcccee-------eEEecCCC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREV---ADLARINHENTGKLL-------GYCRESSP 432 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~---~~l~~l~H~niv~l~-------g~~~~~~~ 432 (521)
+.||+|+||+||+|+.. +|+.||||++..... ......+.|.+|+ .++++++|||||+++ +++.+.+.
T Consensus 79 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 157 (377)
T 3byv_A 79 TVLGQEDPYAYLEATDQETGESFEVHVPYFTER-PPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 157 (377)
T ss_dssp EEEEEETTEEEEEEEC-CCCCEEEEEEEEECC--CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTS
T ss_pred ceeecCCCEEEEEEEECCCCcEEEEEEEeeccc-cchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCC
Confidence 78999999999999975 689999999864322 1233456799999 556666899999998 66654421
Q ss_pred ----------C-----ceEEEEecCCCCChhhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCC
Q 009965 433 ----------F-----TRMLVFDYASNGTLYEHLHYGE-----RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELN 492 (521)
Q Consensus 433 ----------~-----~~~lv~ey~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk 492 (521)
. ..++||||+ +|+|.+++.... ...++|..+..|+.||++||+|||+. +|+|||||
T Consensus 158 ~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDik 233 (377)
T 3byv_A 158 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYLR 233 (377)
T ss_dssp CSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCCC
T ss_pred ccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCC
Confidence 0 278999999 589999997421 12355789999999999999999999 99999999
Q ss_pred CCCeeecCCCCeeeCCCchhhhcc
Q 009965 493 SSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 493 ~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|+|||++.++.+||+|||+|+...
T Consensus 234 p~NIll~~~~~~kL~DFG~a~~~~ 257 (377)
T 3byv_A 234 PVDIVLDQRGGVFLTGFEHLVRDG 257 (377)
T ss_dssp GGGEEECTTCCEEECCGGGCEETT
T ss_pred HHHEEEcCCCCEEEEechhheecC
Confidence 999999999999999999998654
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=5e-24 Score=209.05 Aligned_cols=144 Identities=19% Similarity=0.210 Sum_probs=125.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
.+||+|+||.||+|+.. ++..||+|.+.... ....+.+.+|+.++..++||||+++++++...+ ..++||||+
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 101 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD----SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENG--FIKIFMEQV 101 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCC----C---HHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCc----hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCC--cEEEEEEeC
Confidence 48999999999999985 68899999985432 233467899999999999999999999998876 789999999
Q ss_pred CCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC-CCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGE-RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~-~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.... ...+++..+..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+++.+.
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~ 174 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA 174 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESC
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccC
Confidence 9999999997542 33578999999999999999999999 9999999999999987 8999999999998654
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-24 Score=214.58 Aligned_cols=158 Identities=18% Similarity=0.216 Sum_probs=130.2
Q ss_pred HHHHHHHHhhhh--chhCcCCCeeEEEEEe------CCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccc
Q 009965 352 RQELEVACEDFS--NIIGSSPDSLVYKGTM------KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGK 422 (521)
Q Consensus 352 ~~~l~~~~~~~~--~~ig~G~~g~Vy~~~~------~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~ 422 (521)
..+.....++|. +.||+|+||.||+|+. .+++.||||.+.... .....+.+.+|+.++.++ +||||++
T Consensus 19 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~ 95 (316)
T 2xir_A 19 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVN 95 (316)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred ccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC---CcHHHHHHHHHHHHHHhcccCCCeee
Confidence 333433445554 8899999999999985 246789999984322 223456799999999999 7999999
Q ss_pred eeeEEecCCCCceEEEEecCCCCChhhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEe
Q 009965 423 LLGYCRESSPFTRMLVFDYASNGTLYEHLHYGER--------------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTI 488 (521)
Q Consensus 423 l~g~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH 488 (521)
+++++...+. ..++||||+++|+|.+++..... ..+++..+..++.|+++||+|||+. +|+|
T Consensus 96 ~~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H 171 (316)
T 2xir_A 96 LLGACTKPGG-PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIH 171 (316)
T ss_dssp EEEEECCTTS-CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCC
T ss_pred EEEEEecCCC-ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Cccc
Confidence 9999976542 48999999999999999975432 2289999999999999999999999 9999
Q ss_pred cCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 489 SELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 489 ~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|||||+||++++++.+||+|||+++.+.
T Consensus 172 ~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 199 (316)
T 2xir_A 172 RDLAARNILLSEKNVVKICDFGLARDIY 199 (316)
T ss_dssp SCCSGGGEEECGGGCEEECCCGGGSCTT
T ss_pred ccCccceEEECCCCCEEECCCccccccc
Confidence 9999999999999999999999998653
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=6.2e-24 Score=210.18 Aligned_cols=147 Identities=18% Similarity=0.221 Sum_probs=121.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|... ++..||+|++..... ......+++.+|+.++.+++||||+++++++...+ ..++||||+
T Consensus 38 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 114 (310)
T 2wqm_A 38 KKIGRGQFSEVYRAACLLDGVPVALKKVQIFDL-MDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN--ELNIVLELA 114 (310)
T ss_dssp EEEECC--CEEEEEEETTTCCEEEEEEECTTSS-CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred EeecCCCCceEEEEEEcCCCceEEEEeeehhhc-cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC--cEEEEEecC
Confidence 78999999999999985 789999999854221 22345567999999999999999999999998877 899999999
Q ss_pred CCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.. .....+++..+..++.++++||+|||+. +++||||||+||+++.++.+||+|||+++.+.
T Consensus 115 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 115 DAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp CSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred CCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 99999999863 1234589999999999999999999999 99999999999999999999999999998654
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.7e-24 Score=211.33 Aligned_cols=148 Identities=24% Similarity=0.357 Sum_probs=119.3
Q ss_pred chhCcCCCeeEEEEEeCC----CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCC---ceE
Q 009965 364 NIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF---TRM 436 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~---~~~ 436 (521)
+.||+|+||.||+|+... +..||+|.+..... .....+.+.+|+.++.+++||||+++++++...... ..+
T Consensus 40 ~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 117 (313)
T 3brb_A 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS--SQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPM 117 (313)
T ss_dssp EEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CC--CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEE
T ss_pred cceeecCCeEEEEEEEeccCCceeEEEEEEEecccc--chhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccE
Confidence 789999999999998752 34799999854322 233456799999999999999999999999765421 359
Q ss_pred EEEecCCCCChhhhhcc----CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchh
Q 009965 437 LVFDYASNGTLYEHLHY----GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla 512 (521)
+||||+++|+|.+++.. .....+++..+..|+.|+++||.|||+. +|+||||||+||++++++.+||+|||++
T Consensus 118 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl~Dfg~~ 194 (313)
T 3brb_A 118 VILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLS 194 (313)
T ss_dssp EEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEECSCSCC
T ss_pred EEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEEeecCcc
Confidence 99999999999999852 2234699999999999999999999998 9999999999999999999999999999
Q ss_pred hhcc
Q 009965 513 FLLV 516 (521)
Q Consensus 513 ~~~~ 516 (521)
+.+.
T Consensus 195 ~~~~ 198 (313)
T 3brb_A 195 KKIY 198 (313)
T ss_dssp ----
T ss_pred eecc
Confidence 8654
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=5.1e-24 Score=215.60 Aligned_cols=160 Identities=18% Similarity=0.151 Sum_probs=130.3
Q ss_pred HHHHHHHHhhhh--chhCcCCCeeEEEEEeCCCCEEEEEEeeeecccc-------chhhHHHHHHHHHHHhccCCCCccc
Q 009965 352 RQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHW-------TGYLELYFQREVADLARINHENTGK 422 (521)
Q Consensus 352 ~~~l~~~~~~~~--~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~-------~~~~~~~~~~E~~~l~~l~H~niv~ 422 (521)
..++.....+|. +.||+|+||.||+|...++..||||++....... .....+.+.+|++++.+++||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 456666666775 8999999999999999889999999985543211 1122367999999999999999999
Q ss_pred eeeEEecCC---CCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeec
Q 009965 423 LLGYCRESS---PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT 499 (521)
Q Consensus 423 l~g~~~~~~---~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld 499 (521)
+++++.... ....++||||++ |+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~ 168 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLA 168 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC
T ss_pred eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEc
Confidence 999985432 225799999998 6899888743 34689999999999999999999999 999999999999999
Q ss_pred CCCCeeeCCCchhhhcc
Q 009965 500 EDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 500 ~~~~~kl~DfGla~~~~ 516 (521)
+++.+||+|||+++...
T Consensus 169 ~~~~~kl~Dfg~~~~~~ 185 (362)
T 3pg1_A 169 DNNDITICDFNLAREDT 185 (362)
T ss_dssp TTCCEEECCTTC-----
T ss_pred CCCCEEEEecCcccccc
Confidence 99999999999997543
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.6e-24 Score=211.97 Aligned_cols=146 Identities=12% Similarity=0.097 Sum_probs=124.9
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|.+.... .......+.+.+|+.++.+++||||+++++++...+ ..++||||+
T Consensus 40 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~ 116 (309)
T 2h34_A 40 RLVGRGGMGDVYEAEDTVRERIVALKLMSETL-SSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDG--QLYVDMRLI 116 (309)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEECGGGG-GGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred EEEcCCCCeeEEEEEEcCCCeEEEEEecCccc-ccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCC--eEEEEEEec
Confidence 78999999999999986 68899999985332 122334567999999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++++|.+++.... .+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 117 ~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 186 (309)
T 2h34_A 117 NGVDLAAMLRRQG--PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTD 186 (309)
T ss_dssp CCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC------
T ss_pred CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCccccc
Confidence 9999999997433 589999999999999999999999 999999999999999999999999999876543
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=8e-24 Score=208.68 Aligned_cols=143 Identities=20% Similarity=0.258 Sum_probs=127.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|.+..... ....+.+.+|+.++.+++||||+++++++.+.. ..++||||+
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 102 (303)
T 3a7i_A 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA---EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT--KLWIIMEYL 102 (303)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEETTTC---STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred hhhcccCCeEEEEEEECCCCcEEEEEEeccccc---HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC--eEEEEEEeC
Confidence 78999999999999886 688999999854322 223567999999999999999999999998876 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.+..
T Consensus 103 ~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 171 (303)
T 3a7i_A 103 GGGSALDLLEP---GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 171 (303)
T ss_dssp TTEEHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred CCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCc
Confidence 99999999853 3589999999999999999999999 999999999999999999999999999976543
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.91 E-value=4.5e-24 Score=216.58 Aligned_cols=145 Identities=20% Similarity=0.207 Sum_probs=119.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC----CceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~lv 438 (521)
+.||+|+||.||+|+.. +|+.||||++.... ......+++.+|++++.+++||||+++++++..... ...++|
T Consensus 31 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv 108 (367)
T 1cm8_A 31 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF--QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLV 108 (367)
T ss_dssp EEC------CEEEEEETTTCCEEEEEECSSTT--SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEE
T ss_pred EEeeecCCeEEEEEEECCCCCEEEEEEeCccc--cCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEE
Confidence 78999999999999985 78999999984322 223345678999999999999999999999976531 246999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
|||+ +++|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 109 ~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 180 (367)
T 1cm8_A 109 MPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQADS 180 (367)
T ss_dssp EECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeeccccccc
Confidence 9999 7799999864 2489999999999999999999999 999999999999999999999999999987643
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=9.1e-25 Score=217.70 Aligned_cols=151 Identities=21% Similarity=0.263 Sum_probs=128.0
Q ss_pred HHhhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCC--
Q 009965 358 ACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESS-- 431 (521)
Q Consensus 358 ~~~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~-- 431 (521)
....|. +.||+|+||.||+|+.. +++.||+|.+..... ..+.+.+|+.++.++ +||||+++++++....
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 96 (326)
T 2x7f_A 22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-----EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 96 (326)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-----TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-----cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCc
Confidence 334454 78999999999999985 789999999854322 235789999999999 8999999999997632
Q ss_pred --CCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCC
Q 009965 432 --PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPL 509 (521)
Q Consensus 432 --~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~Df 509 (521)
....++||||+++|+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+||
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Df 173 (326)
T 2x7f_A 97 GMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDF 173 (326)
T ss_dssp CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCC
T ss_pred cccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeC
Confidence 22689999999999999999755445689999999999999999999999 9999999999999999999999999
Q ss_pred chhhhcc
Q 009965 510 CLSFLLV 516 (521)
Q Consensus 510 Gla~~~~ 516 (521)
|+++.+.
T Consensus 174 g~~~~~~ 180 (326)
T 2x7f_A 174 GVSAQLD 180 (326)
T ss_dssp TTTC---
T ss_pred cCceecC
Confidence 9988754
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=5.9e-24 Score=211.62 Aligned_cols=146 Identities=15% Similarity=0.180 Sum_probs=121.2
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccc----cchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH----WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~----~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||+|+.. +++.||||.+...... ........+.+|+.++.+++||||+++++++... ..++|
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~lv 92 (322)
T 2ycf_A 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE---DYYIV 92 (322)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS---SEEEE
T ss_pred eEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC---ceEEE
Confidence 88999999999999986 6789999998543211 1112234588999999999999999999999765 47999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCC---eeeCCCchhhhc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS---PKVSPLCLSFLL 515 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~---~kl~DfGla~~~ 515 (521)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++.+
T Consensus 93 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~ 167 (322)
T 2ycf_A 93 LELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167 (322)
T ss_dssp EECCTTEETHHHHSTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCCTTCEEC
T ss_pred EecCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccCccceec
Confidence 9999999999998643 3589999999999999999999999 9999999999999987654 999999999876
Q ss_pred cc
Q 009965 516 VS 517 (521)
Q Consensus 516 ~~ 517 (521)
..
T Consensus 168 ~~ 169 (322)
T 2ycf_A 168 GE 169 (322)
T ss_dssp CC
T ss_pred cc
Confidence 43
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=6.7e-24 Score=210.53 Aligned_cols=145 Identities=20% Similarity=0.238 Sum_probs=123.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecC--CCCceEEEEe
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES--SPFTRMLVFD 440 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~~~lv~e 440 (521)
+.||+|+||.||+++.. +++.||||++.... ....+.+.+|+.++.+++||||+++++++... .....++|||
T Consensus 35 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e 110 (317)
T 2buj_A 35 QKLGEGGFSYVDLVEGLHDGHFYALKRILCHE----QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLP 110 (317)
T ss_dssp EEEEC--CEEEEEEEETTTCCEEEEEEEEESS----HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEE
T ss_pred EEecCCCCeEEEEEEecCCCcEEEEEEEecCC----HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEE
Confidence 78999999999999985 78999999885432 23456789999999999999999999999632 1226799999
Q ss_pred cCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 441 YASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 441 y~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
|+++|+|.+++... ....+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 111 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 111 FFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp CCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred eCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 99999999998642 334689999999999999999999999 9999999999999999999999999987654
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=5e-24 Score=224.91 Aligned_cols=145 Identities=20% Similarity=0.221 Sum_probs=122.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. ++..||+|.+...... ......+.+|+.++..++|||||+++++|.+.. ..++||||+
T Consensus 43 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e~~ 118 (494)
T 3lij_A 43 KKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVS--TSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKR--NYYLVMECY 118 (494)
T ss_dssp EEEECC---EEEEEEETTTCCEEEEEEEEC-------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEeccccC--chHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEEEEecC
Confidence 78999999999999987 6889999998543321 223457899999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC---CCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~---~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.... .+++..+..|+.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++.+..
T Consensus 119 ~~g~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~ 191 (494)
T 3lij_A 119 KGGELFDEIIHRM--KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191 (494)
T ss_dssp CSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence 9999999886443 489999999999999999999999 9999999999999976 45599999999987653
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=99.91 E-value=4.1e-24 Score=233.16 Aligned_cols=148 Identities=18% Similarity=0.100 Sum_probs=128.0
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCce
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 435 (521)
.+|. ++||+|+||.||+|+.. +++.||||++..... ......+.+..|..++..+ +||+|+++++++.+.+ ..
T Consensus 341 ~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~-~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~--~~ 417 (674)
T 3pfq_A 341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVV-IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--RL 417 (674)
T ss_dssp TTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHH-HHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSS--EE
T ss_pred cceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEecccc-ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCC--EE
Confidence 4454 78999999999999987 688999999854321 1122345688899999988 7999999999998876 89
Q ss_pred EEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 436 ~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
|+||||+++|+|.++++... .+++.++..|+.||+.||+|||+. +|+||||||+|||+|+++.+||+|||+|+..
T Consensus 418 ~lV~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~ 492 (674)
T 3pfq_A 418 YFVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 492 (674)
T ss_dssp EEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred EEEEeCcCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeecc
Confidence 99999999999999997543 489999999999999999999999 9999999999999999999999999999863
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.9e-24 Score=211.54 Aligned_cols=142 Identities=23% Similarity=0.348 Sum_probs=118.4
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|+.. ++.||+|.+.. ....+.|.+|+.++.+++||||+++++++.+ ..++||||++
T Consensus 14 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~------~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----~~~lv~e~~~ 82 (307)
T 2eva_A 14 EVVGRGAFGVVCKAKWR-AKDVAIKQIES------ESERKAFIVELRQLSRVNHPNIVKLYGACLN----PVCLVMEYAE 82 (307)
T ss_dssp EEEECCSSSEEEEEEET-TEEEEEEECSS------TTHHHHHHHHHHHHHHCCCTTBCCEEEBCTT----TTEEEEECCT
T ss_pred eEeecCCCceEEEEEEC-CeeEEEEEecC------hhHHHHHHHHHHHHhcCCCCCcCeEEEEEcC----CcEEEEEcCC
Confidence 78999999999999885 57899998732 1234679999999999999999999998863 4689999999
Q ss_pred CCChhhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCC-eeeCCCchhhhcc
Q 009965 444 NGTLYEHLHYGER-CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS-PKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~-~kl~DfGla~~~~ 516 (521)
+|+|.++++.... ..+++..+..++.|+++||+|||+....+|+||||||+||++++++. +||+|||+++.+.
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~ 157 (307)
T 2eva_A 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ 157 (307)
T ss_dssp TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-----
T ss_pred CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccc
Confidence 9999999975432 24789999999999999999999932238999999999999998886 7999999997654
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.7e-24 Score=210.10 Aligned_cols=141 Identities=17% Similarity=0.170 Sum_probs=123.5
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. ++..||+|.+.... ....+++.+|+.++.+++||||+++++++...+ ..++||||+
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 98 (302)
T 2j7t_A 25 GELGDGAFGKVYKAKNKETGALAAAKVIETKS----EEELEDYIVEIEILATCDHPYIVKLLGAYYHDG--KLWIMIEFC 98 (302)
T ss_dssp EEEECSTTCCEEEEEETTTCCEEEEEEEC--------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC---CEEEEEECC
T ss_pred ceeccCCCeEEEEEEEcCCCcEEEEEEecCCC----HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCC--eEEEEEEeC
Confidence 78999999999999997 58899999885432 123467899999999999999999999998876 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
++|+|.+++... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++..
T Consensus 99 ~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 166 (302)
T 2j7t_A 99 PGGAVDAIMLEL-DRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAK 166 (302)
T ss_dssp TTEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHH
T ss_pred CCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcc
Confidence 999999998642 23589999999999999999999999 999999999999999999999999999764
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.6e-24 Score=210.19 Aligned_cols=140 Identities=13% Similarity=0.145 Sum_probs=122.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHH-hccCCCCccceeeEEec----CCCCceEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADL-ARINHENTGKLLGYCRE----SSPFTRML 437 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l-~~l~H~niv~l~g~~~~----~~~~~~~l 437 (521)
++||+|+||.||+++.. +++.||+|++.. ...+.+|+.++ ...+||||+++++++.. .. ..++
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~--~~~l 92 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQD---------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRK--CLLI 92 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC---------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE--EEEE
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEecc---------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCc--eEEE
Confidence 67999999999999985 788999999832 13467888887 55599999999999875 33 6899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC---CCCeeeCCCchhhh
Q 009965 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPKVSPLCLSFL 514 (521)
Q Consensus 438 v~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~---~~~~kl~DfGla~~ 514 (521)
||||+++|+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++.
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 169 (299)
T 3m2w_A 93 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 169 (299)
T ss_dssp EECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccccccc
Confidence 99999999999999866555799999999999999999999999 9999999999999998 78999999999987
Q ss_pred ccc
Q 009965 515 LVS 517 (521)
Q Consensus 515 ~~~ 517 (521)
...
T Consensus 170 ~~~ 172 (299)
T 3m2w_A 170 TTG 172 (299)
T ss_dssp CTT
T ss_pred ccc
Confidence 654
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.9e-24 Score=213.38 Aligned_cols=144 Identities=24% Similarity=0.372 Sum_probs=122.9
Q ss_pred chhCcCCCeeEEEEEeC-CCCE--EEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPE--IAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~--vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||.||+|+.. ++.. +|+|.+.... .....+.+.+|++++.++ +||||+++++++.+.+ ..++||
T Consensus 31 ~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~--~~~lv~ 105 (327)
T 1fvr_A 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA---SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG--YLYLAI 105 (327)
T ss_dssp EEEECGGGCEEEEEEEEETTEEEEEEEEEEECC---------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred eeeecCCCceEEEEEEccCCcccceeeeeecccc---chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCC--ceEEEE
Confidence 78999999999999986 5554 4888874321 122345689999999999 9999999999998877 899999
Q ss_pred ecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCee
Q 009965 440 DYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPK 505 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~k 505 (521)
||+++|+|.+++.... ...+++.++..++.|+++||+|||+. +|+||||||+||++++++.+|
T Consensus 106 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~k 182 (327)
T 1fvr_A 106 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAK 182 (327)
T ss_dssp CCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEE
T ss_pred ecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCeEE
Confidence 9999999999997432 24689999999999999999999999 999999999999999999999
Q ss_pred eCCCchhhhc
Q 009965 506 VSPLCLSFLL 515 (521)
Q Consensus 506 l~DfGla~~~ 515 (521)
|+|||+++..
T Consensus 183 L~Dfg~~~~~ 192 (327)
T 1fvr_A 183 IADFGLSRGQ 192 (327)
T ss_dssp ECCTTCEESS
T ss_pred EcccCcCccc
Confidence 9999998743
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=5.3e-24 Score=209.28 Aligned_cols=146 Identities=23% Similarity=0.235 Sum_probs=127.5
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccc-----cchhhHHHHHHHHHHHhccC-CCCccceeeEEecCCCCceE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH-----WTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~-----~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~ 436 (521)
+.||+|+||.||+|+.. +++.||||.+...... ......+.+.+|+.++.+++ ||||+++++++.... ..+
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~--~~~ 100 (298)
T 1phk_A 23 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT--FFF 100 (298)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--EEE
T ss_pred eeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCC--eEE
Confidence 78999999999999986 6889999998543211 11223467889999999995 999999999998876 899
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 101 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 175 (298)
T 1phk_A 101 LVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLD 175 (298)
T ss_dssp EEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecccchhhcC
Confidence 999999999999999643 3589999999999999999999999 99999999999999999999999999998654
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4.5e-24 Score=209.25 Aligned_cols=142 Identities=24% Similarity=0.286 Sum_probs=122.4
Q ss_pred hhCcCCCeeEEEEEeC---CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEec
Q 009965 365 IIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 365 ~ig~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
.||+|+||.||+|.+. ++..||||.+.... ......+++.+|+.++..++||||+++++++.. + ..++||||
T Consensus 24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~--~~~lv~e~ 98 (291)
T 1xbb_A 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA--NDPALKDELLAEANVMQQLDNPYIVRMIGICEA-E--SWMLVMEM 98 (291)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC-------CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-S--SEEEEEEC
T ss_pred ccccccCeeeEeeeecCCCceeeEEEEeecccc--cCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECC-C--CcEEEEEe
Confidence 8999999999999653 46789999985432 123345679999999999999999999999954 3 58999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 99 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (291)
T 1xbb_A 99 AELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALR 168 (291)
T ss_dssp CTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred CCCCCHHHHHHhCc--CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeec
Confidence 99999999997543 489999999999999999999999 99999999999999999999999999998654
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4.2e-24 Score=208.35 Aligned_cols=144 Identities=17% Similarity=0.193 Sum_probs=123.0
Q ss_pred chhCcCCCeeEEEEEeCC----CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||.||+|+..+ +..||+|.+.... .....+.|.+|+.++.+++||||+++++++.+. ..++||
T Consensus 18 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~v~ 91 (281)
T 3cc6_A 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC---TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE---PTWIIM 91 (281)
T ss_dssp EEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS---CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS---SCEEEE
T ss_pred EEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc---CchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC---CCEEEE
Confidence 789999999999998753 2359999874321 223456799999999999999999999998754 468999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 92 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 92 ELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIED 165 (281)
T ss_dssp ECCTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred ecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCccccc
Confidence 999999999999643 23589999999999999999999999 999999999999999999999999999987643
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4.8e-24 Score=224.62 Aligned_cols=145 Identities=21% Similarity=0.257 Sum_probs=126.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +++.||||++..... .....+.+.+|+.++.+++||||+++++++.+.. ..++||||+
T Consensus 28 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e~~ 103 (486)
T 3mwu_A 28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASA--KNKDTSTILREVELLKKLDHPNIMKLFEILEDSS--SFYIVGELY 103 (486)
T ss_dssp EEEECCSSSEEEEEEETTTCCEEEEEEEEHHHH--BCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEecccc--cchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCC--EEEEEEEcC
Confidence 89999999999999986 789999999854321 1223467899999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeec---CCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT---EDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld---~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.... .+++..+..|+.|++.||+|||+. +|+||||||+|||++ .++.+||+|||+++.+..
T Consensus 104 ~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 104 TGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp CSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 9999999986443 489999999999999999999999 999999999999995 566899999999987643
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.90 E-value=5.8e-24 Score=212.73 Aligned_cols=146 Identities=23% Similarity=0.326 Sum_probs=121.5
Q ss_pred hhhh--chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc--CCCCccceeeEEecCCC--C
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI--NHENTGKLLGYCRESSP--F 433 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l--~H~niv~l~g~~~~~~~--~ 433 (521)
++|. +.||+|+||.||+|+.. ++.||||++... ....+.+|.+++... +||||+++++++..... .
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 108 (337)
T 3mdy_A 37 KQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT-------EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWT 108 (337)
T ss_dssp HHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG-------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGC
T ss_pred cceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc-------ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCC
Confidence 4454 89999999999999886 788999997422 123455566666555 99999999999987621 2
Q ss_pred ceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCeEecCCCCCCeeecCCCCeeeCC
Q 009965 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL-----GPPFTISELNSSAVYLTEDFSPKVSP 508 (521)
Q Consensus 434 ~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivH~Dlk~~NiLld~~~~~kl~D 508 (521)
..++||||+++|+|.++++.. .+++.++..++.|++.||+|||+.+ .++|+||||||+|||++.++.+||+|
T Consensus 109 ~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~D 185 (337)
T 3mdy_A 109 QLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIAD 185 (337)
T ss_dssp EEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECC
T ss_pred ceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEe
Confidence 689999999999999999643 4899999999999999999999752 44899999999999999999999999
Q ss_pred Cchhhhcc
Q 009965 509 LCLSFLLV 516 (521)
Q Consensus 509 fGla~~~~ 516 (521)
||+++.+.
T Consensus 186 fg~a~~~~ 193 (337)
T 3mdy_A 186 LGLAVKFI 193 (337)
T ss_dssp CTTCEECC
T ss_pred CCCceeec
Confidence 99997653
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=5.1e-24 Score=222.74 Aligned_cols=144 Identities=18% Similarity=0.184 Sum_probs=119.9
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC----CceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~lv 438 (521)
+.||+|+||+||+|+.. +++.||||++.... ......+++.+|+.+++.++|||||++++++..... ...++|
T Consensus 68 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv 145 (464)
T 3ttj_A 68 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLV 145 (464)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEESGG--GSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEE
T ss_pred EEeecCCCeEEEEEEECCCCCEEEEEEECccc--cChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEE
Confidence 78999999999999886 68899999985432 223345678999999999999999999999965431 257999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
|||+++ ++.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+....
T Consensus 146 ~E~~~~-~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 216 (464)
T 3ttj_A 146 MELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 216 (464)
T ss_dssp EECCSE-EHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC-----
T ss_pred EeCCCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeeeecCC
Confidence 999986 57777642 389999999999999999999999 999999999999999999999999999987654
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=7.2e-24 Score=211.46 Aligned_cols=145 Identities=20% Similarity=0.269 Sum_probs=122.1
Q ss_pred chhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEE
Q 009965 364 NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
+.||+|+||.||+|++. ++..||||.+... .......++.+|+.++.+++||||+++++++.... ..++
T Consensus 36 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~l 110 (327)
T 2yfx_A 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV---CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL--PRFI 110 (327)
T ss_dssp EECC--CSSCEEEEEC--------CCEEEEEECCSS---CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCEE
T ss_pred EEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc---cchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC--CcEE
Confidence 78999999999999842 4678999998432 12334567999999999999999999999998876 7899
Q ss_pred EEecCCCCChhhhhccCCC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC---CCCeeeCCC
Q 009965 438 VFDYASNGTLYEHLHYGER-----CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPKVSPL 509 (521)
Q Consensus 438 v~ey~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~---~~~~kl~Df 509 (521)
||||+++|+|.+++..... ..+++.++..++.|++.||+|||+. +|+||||||+|||++. +..+||+||
T Consensus 111 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~Df 187 (327)
T 2yfx_A 111 LMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF 187 (327)
T ss_dssp EEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECCC
T ss_pred EEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEECcc
Confidence 9999999999999975421 3589999999999999999999999 9999999999999984 456999999
Q ss_pred chhhhcc
Q 009965 510 CLSFLLV 516 (521)
Q Consensus 510 Gla~~~~ 516 (521)
|+++.+.
T Consensus 188 g~~~~~~ 194 (327)
T 2yfx_A 188 GMARDIY 194 (327)
T ss_dssp HHHHHHH
T ss_pred ccccccc
Confidence 9998653
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=99.90 E-value=7.7e-24 Score=224.06 Aligned_cols=147 Identities=19% Similarity=0.226 Sum_probs=124.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeecccc---------chhhHHHHHHHHHHHhccCCCCccceeeEEecCCCC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW---------TGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~---------~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 433 (521)
+.||+|+||+||+|+.. ++..||+|.+....... .....+.+.+|+.++.+++||||+++++++.+..
T Consensus 42 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-- 119 (504)
T 3q5i_A 42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKK-- 119 (504)
T ss_dssp EEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--
T ss_pred eEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC--
Confidence 78999999999999987 67899999985432110 0123567899999999999999999999998877
Q ss_pred ceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCC---CeeeCCCc
Q 009965 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF---SPKVSPLC 510 (521)
Q Consensus 434 ~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~---~~kl~DfG 510 (521)
..++||||+++|+|.+++.... .+++..+..|+.|++.||+|||+. +|+||||||+|||++.++ .+||+|||
T Consensus 120 ~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg 194 (504)
T 3q5i_A 120 YFYLVTEFYEGGELFEQIINRH--KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFG 194 (504)
T ss_dssp EEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSEEECCCT
T ss_pred EEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccEEEEECC
Confidence 8999999999999999986443 489999999999999999999999 999999999999998765 69999999
Q ss_pred hhhhccc
Q 009965 511 LSFLLVS 517 (521)
Q Consensus 511 la~~~~~ 517 (521)
+++.+..
T Consensus 195 ~a~~~~~ 201 (504)
T 3q5i_A 195 LSSFFSK 201 (504)
T ss_dssp TCEECCT
T ss_pred CCEEcCC
Confidence 9987653
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-24 Score=216.19 Aligned_cols=143 Identities=21% Similarity=0.249 Sum_probs=122.0
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|++...... .....+.+|+.++.+++||||+++++++.+.+ ..++||||+
T Consensus 8 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 82 (324)
T 3mtl_A 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE---GAPCTAIREVSLLKDLKHANIVTLHDIIHTEK--SLTLVFEYL 82 (324)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECC---------CCCCCCCHHHHSCCCCTTBCCEEEEEECSS--CEEEEEECC
T ss_pred EEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc---ccchhHHHHHHHHHhcCCCCCCeeeeEEeeCC--EEEEEeccc
Confidence 78999999999999987 7899999998543211 11123567999999999999999999998877 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+ |+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 83 ~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 151 (324)
T 3mtl_A 83 D-KDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKS 151 (324)
T ss_dssp S-EEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC-
T ss_pred c-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCccccccc
Confidence 8 59999987443 3589999999999999999999999 99999999999999999999999999987654
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=99.90 E-value=3.6e-24 Score=217.05 Aligned_cols=149 Identities=12% Similarity=0.094 Sum_probs=120.3
Q ss_pred chhCcCCCeeEEEEEeCC------CCEEEEEEeeeeccccc-------hhhHHHHHHHHHHHhccCCCCccceeeEEecC
Q 009965 364 NIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWT-------GYLELYFQREVADLARINHENTGKLLGYCRES 430 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~-------~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 430 (521)
+.||+|+||.||+|++.+ ++.||||.+........ ......+..|+..+..++||||+++++++...
T Consensus 41 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~ 120 (364)
T 3op5_A 41 LPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHD 120 (364)
T ss_dssp EECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEEE
T ss_pred EEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeeec
Confidence 789999999999998864 47899999754321100 01123355667778888999999999999764
Q ss_pred CC--CceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeec--CCCCeee
Q 009965 431 SP--FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT--EDFSPKV 506 (521)
Q Consensus 431 ~~--~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld--~~~~~kl 506 (521)
.. ...++||||+ +|+|.+++... ...++|.++..|+.|++.||+|||+. +|+||||||+|||++ .++.+||
T Consensus 121 ~~~~~~~~lv~e~~-g~~L~~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~~~~~~kl 195 (364)
T 3op5_A 121 KNGKSYRFMIMDRF-GSDLQKIYEAN-AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNPDQVYL 195 (364)
T ss_dssp ETTEEEEEEEEECE-EEEHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESSCTTCEEE
T ss_pred cCCcceEEEEEeCC-CCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecCCCCeEEE
Confidence 21 2579999999 99999999753 24699999999999999999999999 999999999999999 8899999
Q ss_pred CCCchhhhccc
Q 009965 507 SPLCLSFLLVS 517 (521)
Q Consensus 507 ~DfGla~~~~~ 517 (521)
+|||+++.+..
T Consensus 196 ~DFG~a~~~~~ 206 (364)
T 3op5_A 196 VDYGLAYRYCP 206 (364)
T ss_dssp CCCTTCEESSG
T ss_pred EECCcceeccc
Confidence 99999987643
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.9e-24 Score=210.38 Aligned_cols=142 Identities=23% Similarity=0.311 Sum_probs=119.4
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+++.. |+.||||.+.... ..+.+.+|+.++.+++||||+++++++..... ..++||||++
T Consensus 27 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~lv~e~~~ 98 (278)
T 1byg_A 27 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMA 98 (278)
T ss_dssp EEEEECSSCEEEEEEET-TEEEEEEECCCCC--------HHHHHTHHHHTTCCCTTBCCEEEEECCC---CCEEEECCCT
T ss_pred eEEecCCCceEEEEEEc-CCEEEEEEecchh------HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCC-ceEEEEecCC
Confidence 78999999999999885 6789999884321 24578999999999999999999999765432 5799999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+|+|.+++.......+++..+..++.|+++||+|||+. +++||||||+||++++++.+||+|||+++...
T Consensus 99 ~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 168 (278)
T 1byg_A 99 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 168 (278)
T ss_dssp TEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccc
Confidence 99999999754333478999999999999999999999 99999999999999999999999999988654
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3e-24 Score=211.39 Aligned_cols=145 Identities=17% Similarity=0.221 Sum_probs=112.9
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||||.+..... ....+++.+|+.++.+++||||+++++++...+ ..++||||+
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 95 (303)
T 2vwi_A 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC---QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKD--ELWLVMKLL 95 (303)
T ss_dssp EECC---CCCEEEEEC----CEEEEECCC-------------------CCCCCCCTTBCCEEEEEESSS--CEEEEEECC
T ss_pred heeccccceEEEEEEECCCCcEEEEEEEEhhhc---chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecC--CcEEEehhc
Confidence 78999999999999875 688999998854321 123457889999999999999999999998877 789999999
Q ss_pred CCCChhhhhcc------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHY------GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.. .....+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 96 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 172 (303)
T 2vwi_A 96 SGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLA 172 (303)
T ss_dssp TTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHHHCC
T ss_pred cCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchheec
Confidence 99999999863 1234589999999999999999999999 99999999999999999999999999998654
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.7e-24 Score=218.50 Aligned_cols=145 Identities=15% Similarity=0.222 Sum_probs=119.5
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCC-----
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----- 431 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----- 431 (521)
.+|. +.||+|+||.||+|+.. +|+.||||++..... ...+|+.+++.++||||+++++++....
T Consensus 7 ~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~--------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR--------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp TTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT--------SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc--------hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 4454 78999999999999985 789999999853322 1347999999999999999999985422
Q ss_pred -------------------------------CCceEEEEecCCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHH
Q 009965 432 -------------------------------PFTRMLVFDYASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYL 478 (521)
Q Consensus 432 -------------------------------~~~~~lv~ey~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yL 478 (521)
....++||||++ |+|.+.+.. .....+++..+..++.|+++||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 114789999998 588877752 2334699999999999999999999
Q ss_pred hcCCCCCeEecCCCCCCeeec-CCCCeeeCCCchhhhcc
Q 009965 479 HTELGPPFTISELNSSAVYLT-EDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 479 H~~~~~~ivH~Dlk~~NiLld-~~~~~kl~DfGla~~~~ 516 (521)
|+. +|+||||||+|||++ +++.+||+|||+|+.+.
T Consensus 158 H~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~ 193 (383)
T 3eb0_A 158 HSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLI 193 (383)
T ss_dssp HTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECC
T ss_pred HHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccC
Confidence 998 999999999999998 68999999999998754
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=8.5e-24 Score=216.26 Aligned_cols=142 Identities=15% Similarity=0.155 Sum_probs=124.1
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC--CCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN--HENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~--H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||++...+++.||||++..... .....+.+.+|+.++.+++ ||||+++++++...+ ..++|||
T Consensus 62 ~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~--~~~lv~E- 136 (390)
T 2zmd_A 62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIYMVME- 136 (390)
T ss_dssp EEEECCSSEEEEEEECTTCCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEEE-
T ss_pred EEEccCCCeEEEEEEcCCCCEEEEEEEecccc--cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCC--EEEEEEe-
Confidence 78999999999999998899999999854332 2344567999999999996 599999999998877 7999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+.+|+|.+++.... .+++.++..|+.||+.||+|||+. +|+||||||+|||++ ++.+||+|||+++.+.
T Consensus 137 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 137 CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred cCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 56789999997543 589999999999999999999998 999999999999996 5899999999998764
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=99.90 E-value=8.9e-24 Score=208.52 Aligned_cols=142 Identities=19% Similarity=0.262 Sum_probs=124.2
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+++.. +|+.||+|.+..... ...+.+.+|+.++.+++||||+++++++.+.. ..++||||+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 88 (304)
T 2jam_A 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA----FRDSSLENEIAVLKKIKHENIVTLEDIYESTT--HYYLVMQLV 88 (304)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEECC----------HHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred eeccCCCCceEEEEEECCCCCEEEEEEEecccc----cchHHHHHHHHHHHhCCCCCeeehhhhcccCC--EEEEEEEcC
Confidence 78999999999999986 789999999854321 12356889999999999999999999998877 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee---cCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL---TEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLl---d~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++ ++++.+||+|||+++...
T Consensus 89 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 160 (304)
T 2jam_A 89 SGGELFDRILERG--VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ 160 (304)
T ss_dssp CSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred CCccHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence 9999999986433 489999999999999999999999 99999999999999 788999999999988654
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1e-23 Score=212.49 Aligned_cols=146 Identities=21% Similarity=0.316 Sum_probs=124.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCC------CCceE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS------PFTRM 436 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------~~~~~ 436 (521)
+.||+|+||.||+|+.. +++.||+|++...... ......+.+|+.++..++||||+++++++.... ....+
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~ 100 (351)
T 3mi9_A 23 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIY 100 (351)
T ss_dssp EECSSCSTTSEEEEEETTTCCEEEEEECCCSSCS--SSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEE
T ss_pred EEEecCCCcEEEEEEECCCCCEEEEEEEeccccc--ccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEE
Confidence 78999999999999985 7899999998544322 223456889999999999999999999997642 12579
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+||||+++ +|.+.+.... ..+++.++..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 101 lv~e~~~~-~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 175 (351)
T 3mi9_A 101 LVFDFCEH-DLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFS 175 (351)
T ss_dssp EEEECCSE-EHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEeccCC-CHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchhccccc
Confidence 99999985 8888776432 3589999999999999999999999 99999999999999999999999999998654
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-23 Score=209.76 Aligned_cols=138 Identities=15% Similarity=0.154 Sum_probs=122.5
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|+.. +++.||||.+... ..+.+.+|+.++.+++ ||||+++++++.+......++||||
T Consensus 42 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~ 114 (330)
T 3nsz_A 42 RKLGRGKYSEVFEAINITNNEKVVVKILKPV-------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEH 114 (330)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECSC-------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEEC
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEeccc-------chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEec
Confidence 78999999999999885 7899999998422 2356899999999997 9999999999987443378999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCC-CeeeCCCchhhhcc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-SPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~-~~kl~DfGla~~~~ 516 (521)
+++++|.+++. .+++.++..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+++.+.
T Consensus 115 ~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~ 182 (330)
T 3nsz_A 115 VNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 182 (330)
T ss_dssp CCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred cCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcC
Confidence 99999999984 388999999999999999999999 999999999999999776 89999999998654
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=9.6e-24 Score=209.12 Aligned_cols=142 Identities=15% Similarity=0.238 Sum_probs=122.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +|+.||+|.+.... ..+++.+|+.++.+++||||+++++++...+ ..++||||+
T Consensus 35 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 106 (314)
T 3com_A 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVES------DLQEIIKEISIMQQCDSPHVVKYYGSYFKNT--DLWIVMEYC 106 (314)
T ss_dssp EECC----CEEEEEEETTTCCEEEEEEEETTS------CCHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEecCchH------HHHHHHHHHHHHHhCCCCCCccEEEEEEeCC--EEEEEeecC
Confidence 78999999999999987 58999999985322 2356899999999999999999999998876 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++... ...+++..+..++.+++.||+|||+. +++||||||+||+++.++.+||+|||+++.+..
T Consensus 107 ~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 177 (314)
T 3com_A 107 GAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD 177 (314)
T ss_dssp TTEEHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBT
T ss_pred CCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhh
Confidence 999999998632 23589999999999999999999999 999999999999999999999999999976543
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4.3e-24 Score=228.17 Aligned_cols=144 Identities=13% Similarity=0.064 Sum_probs=111.6
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeecc------ccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCce
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEE------HWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~------~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 435 (521)
...+.|+.|.+++++-. .|+.+++|.+..... .......++|.+|+++|+++ .|+||++++++++++. ..
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~--~~ 317 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQ--SG 317 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSS--EE
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECC--EE
Confidence 34566666666655432 578899999854321 11223346799999999999 7999999999999887 89
Q ss_pred EEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 436 ~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
||||||++||+|.++|.... +++.. +|+.||+.||+|+|+. +||||||||+|||+++++.+||+|||+|+.+
T Consensus 318 yLVMEyv~G~~L~d~i~~~~--~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~ 389 (569)
T 4azs_A 318 WLVMEKLPGRLLSDMLAAGE--EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTT 389 (569)
T ss_dssp EEEEECCCSEEHHHHHHTTC--CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESC
T ss_pred EEEEecCCCCcHHHHHHhCC--CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeC
Confidence 99999999999999997544 46653 5899999999999999 9999999999999999999999999999876
Q ss_pred cc
Q 009965 516 VS 517 (521)
Q Consensus 516 ~~ 517 (521)
..
T Consensus 390 ~~ 391 (569)
T 4azs_A 390 PQ 391 (569)
T ss_dssp C-
T ss_pred CC
Confidence 54
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-23 Score=210.38 Aligned_cols=144 Identities=23% Similarity=0.285 Sum_probs=123.9
Q ss_pred hhhh--chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhc--cCCCCccceeeEEecCCC--C
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLAR--INHENTGKLLGYCRESSP--F 433 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~g~~~~~~~--~ 433 (521)
++|. +.||+|+||.||+|+. +++.||||.+... ..+.+.+|.+++.. ++||||+++++++..... .
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~ 113 (342)
T 1b6c_B 42 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 113 (342)
T ss_dssp HHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG-------GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred ccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch-------hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence 4444 8999999999999998 4789999998422 23467888888887 799999999999987542 1
Q ss_pred ceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCCeEecCCCCCCeeecCCCCee
Q 009965 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH--------TELGPPFTISELNSSAVYLTEDFSPK 505 (521)
Q Consensus 434 ~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivH~Dlk~~NiLld~~~~~k 505 (521)
..++||||+++|+|.+++... .+++.++..++.|++.||+||| +. +|+||||||+|||+++++.+|
T Consensus 114 ~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~~~k 187 (342)
T 1b6c_B 114 QLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCC 187 (342)
T ss_dssp CEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTSCEE
T ss_pred eeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCCCEE
Confidence 579999999999999999643 4899999999999999999999 66 999999999999999999999
Q ss_pred eCCCchhhhccc
Q 009965 506 VSPLCLSFLLVS 517 (521)
Q Consensus 506 l~DfGla~~~~~ 517 (521)
|+|||+++....
T Consensus 188 L~Dfg~~~~~~~ 199 (342)
T 1b6c_B 188 IADLGLAVRHDS 199 (342)
T ss_dssp ECCCTTCEEEET
T ss_pred EEECCCceeccc
Confidence 999999976653
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=1e-23 Score=216.86 Aligned_cols=143 Identities=20% Similarity=0.274 Sum_probs=113.2
Q ss_pred chhCcCCCeeEEEEEeC---CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEe
Q 009965 364 NIIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
++||+|+||.||+|+.. ++..||+|++.... ....+.+|+.++.+++||||+++++++........++|||
T Consensus 27 ~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~------~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e 100 (405)
T 3rgf_A 27 CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG------ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 100 (405)
T ss_dssp CCCC-----EEEEEEESSSSCCCCEEEEECSSSS------CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEE
T ss_pred cEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC------CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEe
Confidence 57999999999999975 47889999984322 1246889999999999999999999996543337899999
Q ss_pred cCCCCChhhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee----cCCCCeeeCCC
Q 009965 441 YASNGTLYEHLHYG-------ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL----TEDFSPKVSPL 509 (521)
Q Consensus 441 y~~~gsL~~~l~~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLl----d~~~~~kl~Df 509 (521)
|+++ +|.+++... ....+++..+..|+.|++.||+|||+. +|+||||||+|||+ ++++.+||+||
T Consensus 101 ~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 176 (405)
T 3rgf_A 101 YAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 176 (405)
T ss_dssp CCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEECCT
T ss_pred CCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEEEC
Confidence 9975 888887521 123489999999999999999999999 99999999999999 77899999999
Q ss_pred chhhhcc
Q 009965 510 CLSFLLV 516 (521)
Q Consensus 510 Gla~~~~ 516 (521)
|+|+.+.
T Consensus 177 g~a~~~~ 183 (405)
T 3rgf_A 177 GFARLFN 183 (405)
T ss_dssp TCCC---
T ss_pred CCceecC
Confidence 9998764
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-23 Score=204.98 Aligned_cols=140 Identities=13% Similarity=0.074 Sum_probs=121.5
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||||.+..... ......+.|.+|+.++.+++||||+++++++.+.+ ..++||||+
T Consensus 37 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~ 113 (286)
T 3uqc_A 37 IFHGGVPPLQFWQALDTALDRQVALTFVDPQGV-LPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRA--GGLVVAEWI 113 (286)
T ss_dssp EEEEBSTTCEEEEEEETTTTEEEEEEESCTTCC-SCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred EEEcccCCeEEEEEEecCCCceEEEEEECcccc-cCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECC--cEEEEEEec
Confidence 78999999999999987 588999999854322 22334567999999999999999999999998877 799999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhh
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSF 513 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~ 513 (521)
++++|.+++... ....+..+|+.|++.||+|||+. +|+||||||+|||+++++.+||+++|...
T Consensus 114 ~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~~~~ 177 (286)
T 3uqc_A 114 RGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPATMP 177 (286)
T ss_dssp CEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCCCCT
T ss_pred CCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEeccccC
Confidence 999999999532 35567889999999999999999 99999999999999999999999887543
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-23 Score=206.55 Aligned_cols=141 Identities=11% Similarity=0.127 Sum_probs=123.6
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|+.. +++.||||.+..... .+.+.+|+.++.++ +|+|++++++++.... ..++||||
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~--~~~lv~e~ 87 (298)
T 1csn_A 16 RRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD------APQLRDEYRTYKLLAGCTGIPNVYYFGQEGL--HNVLVIDL 87 (298)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEECCTT------SCCHHHHHHHHHHTTTCTTCCCEEEEEEETT--EEEEEEEC
T ss_pred EEEeecCCEEEEEEEECCCCcEEEEEEeccCCc------cHHHHHHHHHHHHHhcCCCCCeEEeecCCCc--eeEEEEEe
Confidence 78999999999999974 788999998743321 23578899999999 8999999999998776 78999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCC-----eeeCCCchhhhcc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS-----PKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~-----~kl~DfGla~~~~ 516 (521)
+ +|+|.+++.... ..+++.++..|+.|+++||+|||+. +|+||||||+|||++.++. +||+|||+++.+.
T Consensus 88 ~-~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 88 L-GPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp C-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred c-CCCHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 9 899999997433 3589999999999999999999998 9999999999999988776 9999999998765
Q ss_pred c
Q 009965 517 S 517 (521)
Q Consensus 517 ~ 517 (521)
.
T Consensus 163 ~ 163 (298)
T 1csn_A 163 D 163 (298)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-23 Score=205.51 Aligned_cols=147 Identities=15% Similarity=0.116 Sum_probs=115.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|++..... .....+.+.++...+..++||||+++++++.+.+ ..++||||+
T Consensus 13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~--~~~lv~e~~ 88 (290)
T 3fme_A 13 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN--SQEQKRLLMDLDISMRTVDCPFTVTFYGALFREG--DVWICMELM 88 (290)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEC---C--HHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--SEEEEEECC
T ss_pred HhcCCCCCeEEEEEEecCCCeEEEEEEeecccC--cHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccC--CEEEEEehh
Confidence 78999999999999985 788999999854321 1222334555556688889999999999998876 789999999
Q ss_pred CCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
+ |+|.+++.. .....+++..+..|+.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||+++.+..
T Consensus 89 ~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 89 D-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp S-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred c-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 8 588888753 13346999999999999999999999842 899999999999999999999999999987543
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.9e-23 Score=210.59 Aligned_cols=143 Identities=18% Similarity=0.199 Sum_probs=124.0
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCC---CCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS---PFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~---~~~~~lv~ 439 (521)
+.||+|+||.||+|+.. +|+.||||.+.... ......++.+|+.++.+++||||+++++++.... ....++||
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~ 93 (353)
T 2b9h_A 17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD---KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQ 93 (353)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCCS---SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEE
T ss_pred eEEcCCCCeEEEEEEECCCCcEEEEEeecccc---cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEE
Confidence 78999999999999986 68899999984321 2234567889999999999999999999986541 12689999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
||++ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 94 e~~~-~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 94 ELMQ-TDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp CCCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred eccC-ccHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 9997 5999998642 489999999999999999999999 99999999999999999999999999998764
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.8e-23 Score=209.20 Aligned_cols=142 Identities=27% Similarity=0.453 Sum_probs=115.9
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHH--HhccCCCCccceeeEEec---CCCCceEEE
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVAD--LARINHENTGKLLGYCRE---SSPFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~--l~~l~H~niv~l~g~~~~---~~~~~~~lv 438 (521)
+.||+|+||.||+|+. +++.||||++.... .+.+..|.++ +..++||||+++++++.. ......++|
T Consensus 19 ~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv 90 (336)
T 3g2f_A 19 ELIGRGRYGAVYKGSL-DERPVAVKVFSFAN-------RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLV 90 (336)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEEEGGG-------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEE
T ss_pred eecccCCCeEEEEEEE-CCeEEEEEEeeccc-------hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEE
Confidence 7899999999999987 67899999984321 2234444444 455899999999986642 222246899
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC------CCCeEecCCCCCCeeecCCCCeeeCCCchh
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL------GPPFTISELNSSAVYLTEDFSPKVSPLCLS 512 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------~~~ivH~Dlk~~NiLld~~~~~kl~DfGla 512 (521)
|||+++|+|.+++.... .+|..+.+|+.|+++||+|||+.+ .++|+||||||+|||+++++.+||+|||++
T Consensus 91 ~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a 167 (336)
T 3g2f_A 91 MEYYPNGSLXKYLSLHT---SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS 167 (336)
T ss_dssp ECCCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTC
T ss_pred EecCCCCcHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccce
Confidence 99999999999996433 589999999999999999999863 348999999999999999999999999999
Q ss_pred hhcc
Q 009965 513 FLLV 516 (521)
Q Consensus 513 ~~~~ 516 (521)
+.+.
T Consensus 168 ~~~~ 171 (336)
T 3g2f_A 168 MRLT 171 (336)
T ss_dssp EECS
T ss_pred eecc
Confidence 8664
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-23 Score=212.48 Aligned_cols=145 Identities=21% Similarity=0.175 Sum_probs=109.9
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCC----CCceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----PFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~~~~lv 438 (521)
+.||+|+||.||+|+.. +|+.||||++.... ......+++.+|+.++..++||||+++++++.... ....++|
T Consensus 35 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv 112 (367)
T 2fst_X 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 112 (367)
T ss_dssp EECC----CCEEEEEETTTTEEEEEEECSSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEE
T ss_pred eEEeecCCeEEEEEEECCCCCEEEEEEeCccc--cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEE
Confidence 78999999999999875 68899999984322 22334567889999999999999999999996541 1257999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
+||+ +++|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 113 ~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~ 184 (367)
T 2fst_X 113 THLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTAD 184 (367)
T ss_dssp EECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC---------
T ss_pred eccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccccccccc
Confidence 9999 5799998853 3589999999999999999999999 999999999999999999999999999987543
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.8e-23 Score=208.98 Aligned_cols=145 Identities=17% Similarity=0.211 Sum_probs=123.0
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCCccceeeEEecC------CCCce
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRES------SPFTR 435 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~------~~~~~ 435 (521)
+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.++.+++ ||||+++++++... .....
T Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~ 109 (337)
T 3ll6_A 34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNE----EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEF 109 (337)
T ss_dssp EEEECCSSEEEEEEEETTTCCEEEEEEEEESS----HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEE
T ss_pred EEEccCCceEEEEEEECCCCcEEEEEEecCCc----hHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceE
Confidence 78999999999999986 78999999884332 234567899999999996 99999999999421 11257
Q ss_pred EEEEecCCCCChhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEecCCCCCCeeecCCCCeeeCCCchh
Q 009965 436 MLVFDYASNGTLYEHLHY-GERCQVSWTRRMKIVIGIARGLKYLHTELGPP--FTISELNSSAVYLTEDFSPKVSPLCLS 512 (521)
Q Consensus 436 ~lv~ey~~~gsL~~~l~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivH~Dlk~~NiLld~~~~~kl~DfGla 512 (521)
++|+||++ |+|.+++.. .....+++.++..|+.|++.||+|||+. + |+||||||+|||+++++.+||+|||++
T Consensus 110 ~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 185 (337)
T 3ll6_A 110 LLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185 (337)
T ss_dssp EEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCCCTTC
T ss_pred EEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEecCccc
Confidence 99999996 699998863 2234599999999999999999999998 6 999999999999999999999999999
Q ss_pred hhcc
Q 009965 513 FLLV 516 (521)
Q Consensus 513 ~~~~ 516 (521)
+.+.
T Consensus 186 ~~~~ 189 (337)
T 3ll6_A 186 TTIS 189 (337)
T ss_dssp BCCS
T ss_pred eecc
Confidence 8764
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-22 Score=196.59 Aligned_cols=177 Identities=22% Similarity=0.230 Sum_probs=128.0
Q ss_pred CEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecc
Q 009965 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
.++.|+|++|.+++..+..|..+++|++|+|++|+++...+..|..+++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 57778888888877666678888888888888888876555666778888888888888886666677788888888888
Q ss_pred cccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc-----cCCCCCCEEeccCCcccc
Q 009965 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFVG 225 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~l~~L~~L~ls~N~l~g 225 (521)
+|++++..|..|..+++|++|+|++|.+++ +|...+.. ..++..+++++|.++.+ ..+++|+.|++++|++++
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 195 (270)
T 2o6q_A 118 RNQLKSLPPRVFDSLTKLTYLSLGYNELQS-LPKGVFDK-LTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKR 195 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTT-CTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCccCeeCHHHhCcCcCCCEEECCCCcCCc-cCHhHccC-CcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCc
Confidence 888887777777888888888888888873 44332221 24677777888777653 346778888888888875
Q ss_pred CCcccc---ccCCCcccCCCcCCCCCC
Q 009965 226 SIPKCL---EYLPSTSFQGNCLQNKDP 249 (521)
Q Consensus 226 ~ip~~l---~~l~~l~~~~N~l~~~~~ 249 (521)
..+..+ .+|+.+++++|++.+.|.
T Consensus 196 ~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 196 VPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp CCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred CCHHHhccccCCCEEEecCCCeeCCCc
Confidence 444434 455667788887776553
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.8e-23 Score=202.23 Aligned_cols=145 Identities=20% Similarity=0.246 Sum_probs=126.5
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||+|.+...... ....+.+.+|++++.+++||||+++++++.... ..++|+||+
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 103 (287)
T 2wei_A 28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK--NKDTSTILREVELLKKLDHPNIMKLFEILEDSS--SFYIVGELY 103 (287)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS--SSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc--hHHHHHHHHHHHHHHhccCCCccEEEEEEeCCC--eEEEEEEcc
Confidence 88999999999999987 7889999998543221 233567899999999999999999999998876 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCC---CCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED---FSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~---~~~kl~DfGla~~~~~ 517 (521)
++++|.+++.... .+++..+..++.|++.||+|||+. +++||||||+||+++.+ +.+||+|||+++....
T Consensus 104 ~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~ 176 (287)
T 2wei_A 104 TGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (287)
T ss_dssp CSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCC
T ss_pred CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcceeecC
Confidence 9999999886433 489999999999999999999999 99999999999999754 4799999999987653
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.8e-23 Score=205.94 Aligned_cols=142 Identities=18% Similarity=0.284 Sum_probs=116.6
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCC-----------
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----------- 431 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----------- 431 (521)
+.||+|+||.||+|+.. +++.||+|++.... ....+++.+|+.++++++||||+++++++....
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~ 92 (320)
T 2i6l_A 17 KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD----PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLT 92 (320)
T ss_dssp EECC-----CEEEEEETTTTEEEEEEEEECCS----HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CC
T ss_pred EEeccCCCeEEEEEEECCCCeEEEEEEEecCC----hHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccccc
Confidence 78999999999999997 58899999885332 234567899999999999999999999984321
Q ss_pred -CCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeec-CCCCeeeCCC
Q 009965 432 -PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT-EDFSPKVSPL 509 (521)
Q Consensus 432 -~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld-~~~~~kl~Df 509 (521)
....++||||++ |+|.+++.. .++++..+..++.|+++||+|||+. +|+||||||+||+++ +++.+||+||
T Consensus 93 ~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~Df 165 (320)
T 2i6l_A 93 ELNSVYIVQEYME-TDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDF 165 (320)
T ss_dssp SCSEEEEEEECCS-EEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEECCC
T ss_pred ccCceeEEeeccC-CCHHHHhhc---CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEccC
Confidence 126799999998 699999853 3489999999999999999999999 999999999999997 5679999999
Q ss_pred chhhhcc
Q 009965 510 CLSFLLV 516 (521)
Q Consensus 510 Gla~~~~ 516 (521)
|+++.+.
T Consensus 166 g~~~~~~ 172 (320)
T 2i6l_A 166 GLARIMD 172 (320)
T ss_dssp TTCBCC-
T ss_pred ccccccC
Confidence 9998764
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.3e-23 Score=215.77 Aligned_cols=143 Identities=18% Similarity=0.119 Sum_probs=124.0
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc------CCCCccceeeEEecCCCCceE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI------NHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l------~H~niv~l~g~~~~~~~~~~~ 436 (521)
+.||+|+||.||+|+.. +++.||||++... ....+.+.+|++++..+ .|+||+++++++.... ..+
T Consensus 103 ~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~--~~~ 175 (429)
T 3kvw_A 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-----KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN--HIC 175 (429)
T ss_dssp EEEEESSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT--EEE
T ss_pred EEcccCccEEEEEEEECCCCcEEEEEEECCc-----cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC--eEE
Confidence 78999999999999886 5889999998432 12345677888888877 5779999999998877 899
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCC--eeeCCCchhhh
Q 009965 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS--PKVSPLCLSFL 514 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~--~kl~DfGla~~ 514 (521)
+||||++ |+|.+++.......+++..+..|+.||++||+|||+. +|+||||||+|||++.++. +||+|||+++.
T Consensus 176 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~ 251 (429)
T 3kvw_A 176 MTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCY 251 (429)
T ss_dssp EEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeeccccee
Confidence 9999997 5999999766555699999999999999999999999 9999999999999999887 99999999976
Q ss_pred ccc
Q 009965 515 LVS 517 (521)
Q Consensus 515 ~~~ 517 (521)
...
T Consensus 252 ~~~ 254 (429)
T 3kvw_A 252 EHQ 254 (429)
T ss_dssp TTC
T ss_pred cCC
Confidence 543
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=99.89 E-value=1.7e-23 Score=208.49 Aligned_cols=147 Identities=22% Similarity=0.271 Sum_probs=122.0
Q ss_pred chhCcCCCeeEEEEEeC--CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc---CCCCccceeeEEec---CCCCce
Q 009965 364 NIIGSSPDSLVYKGTMK--GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI---NHENTGKLLGYCRE---SSPFTR 435 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~--~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~---~~~~~~ 435 (521)
+.||+|+||.||+|+.. +++.||+|++...... ......+.+|+.++..+ +||||+++++++.. ......
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~ 94 (326)
T 1blx_A 17 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE--EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKL 94 (326)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCT--TSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEE
T ss_pred eeecccccEEEEEEEecCCCCEEEEEEEeccCccc--ccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceE
Confidence 78999999999999983 6788999998654321 11123466777777666 89999999999862 112268
Q ss_pred EEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 436 ~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
++||||++ |+|.+++.......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.+
T Consensus 95 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 170 (326)
T 1blx_A 95 TLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY 170 (326)
T ss_dssp EEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCCSCCCC
T ss_pred EEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecCcccccc
Confidence 99999998 6999999765555699999999999999999999999 9999999999999999999999999999865
Q ss_pred c
Q 009965 516 V 516 (521)
Q Consensus 516 ~ 516 (521)
.
T Consensus 171 ~ 171 (326)
T 1blx_A 171 S 171 (326)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=99.89 E-value=3.1e-23 Score=210.14 Aligned_cols=143 Identities=22% Similarity=0.221 Sum_probs=124.0
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCC---CCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS---PFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~---~~~~~lv~ 439 (521)
+.||+|+||.||+|+.. ++..||||++.... .....+.+.+|++++.+++||||+++++++.... ....++|+
T Consensus 33 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~ 109 (364)
T 3qyz_A 33 SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE---HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQ 109 (364)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCTT---CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEE
T ss_pred EEeecCCCeEEEEEEECCCCeEEEEEEecccc---CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEE
Confidence 78999999999999986 67889999985322 2234467899999999999999999999996542 12579999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
||++ |+|.+++... .+++.++..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 110 e~~~-~~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 110 DLME-TDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp ECCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred cccC-cCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 9998 5999998643 489999999999999999999999 99999999999999999999999999998765
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-23 Score=211.36 Aligned_cols=147 Identities=12% Similarity=0.083 Sum_probs=117.0
Q ss_pred chhCcCCCeeEEEEEeC----CCCEEEEEEeeeeccccc-------hhhHHHHHHHHHHHhccCCCCccceeeEEecC--
Q 009965 364 NIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWT-------GYLELYFQREVADLARINHENTGKLLGYCRES-- 430 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~-------~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-- 430 (521)
+.||+|+||.||+|+.. ++..+|+|.......... ....+.+.+|+..+..++||||+++++++...
T Consensus 43 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~~ 122 (345)
T 2v62_A 43 KKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFK 122 (345)
T ss_dssp EEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEESS
T ss_pred eeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccccccC
Confidence 78999999999999986 567899998854322110 11224577889999999999999999999762
Q ss_pred CCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCC--CeeeCC
Q 009965 431 SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF--SPKVSP 508 (521)
Q Consensus 431 ~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~--~~kl~D 508 (521)
+....++||||+ +|+|.+++.... .+++.++..|+.|++.||+|||+. +|+||||||+|||++.++ .+||+|
T Consensus 123 ~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kL~D 196 (345)
T 2v62_A 123 GRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPDQVYLAD 196 (345)
T ss_dssp SCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTTSEEECC
T ss_pred CCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCCcEEEEe
Confidence 122789999999 899999996443 699999999999999999999999 999999999999999887 999999
Q ss_pred Cchhhhcc
Q 009965 509 LCLSFLLV 516 (521)
Q Consensus 509 fGla~~~~ 516 (521)
||+++.+.
T Consensus 197 fg~a~~~~ 204 (345)
T 2v62_A 197 YGLSYRYC 204 (345)
T ss_dssp CTTCEESS
T ss_pred CCCceecc
Confidence 99998764
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=99.89 E-value=1.5e-23 Score=216.50 Aligned_cols=141 Identities=19% Similarity=0.277 Sum_probs=116.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCC----CCceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----PFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~~~~lv 438 (521)
++||+|+||.||+|+.. +++.||||++..... .+.+|++++++++|||||++++++.... ....++|
T Consensus 60 ~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~--------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv 131 (420)
T 1j1b_A 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR--------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 131 (420)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEECCTT--------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEE
T ss_pred eEEeeCCCEEEEEEEECCCCcEEEEEEecccch--------hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEee
Confidence 78999999999999996 689999999843221 2347999999999999999999985422 1136799
Q ss_pred EecCCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCC-CCeeeCCCchhhhc
Q 009965 439 FDYASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED-FSPKVSPLCLSFLL 515 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~-~~~kl~DfGla~~~ 515 (521)
|||+++ ++.+.+.. .....+++..+..++.||++||+|||+. +|+||||||+|||++.+ +.+||+|||+++.+
T Consensus 132 ~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~ 207 (420)
T 1j1b_A 132 LDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207 (420)
T ss_dssp EECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred hhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhhhc
Confidence 999986 67666542 2334699999999999999999999998 99999999999999965 57899999999875
Q ss_pred c
Q 009965 516 V 516 (521)
Q Consensus 516 ~ 516 (521)
.
T Consensus 208 ~ 208 (420)
T 1j1b_A 208 V 208 (420)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=99.89 E-value=4.1e-23 Score=209.86 Aligned_cols=144 Identities=17% Similarity=0.177 Sum_probs=119.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC----CceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~lv 438 (521)
+.||+|+||.||+|+.. +++.||||++.... ......+.+.+|+.+++.++||||+++++++..... ...++|
T Consensus 31 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv 108 (371)
T 2xrw_A 31 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIV 108 (371)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEECTT--SSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEE
T ss_pred eeeEecCCEEEEEEEECCCCceEEEEEecccc--CChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEE
Confidence 78999999999999886 68899999985432 123345678999999999999999999999975431 257999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
|||+++ +|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 109 ~e~~~~-~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~ 179 (371)
T 2xrw_A 109 MELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 179 (371)
T ss_dssp EECCSE-EHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC------
T ss_pred EEcCCC-CHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeeccccccc
Confidence 999975 88888852 389999999999999999999999 999999999999999999999999999987653
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-23 Score=205.01 Aligned_cols=145 Identities=21% Similarity=0.247 Sum_probs=117.4
Q ss_pred chhCcCCCeeEEEEEeC--CCC--EEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMK--GGP--EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~--~~~--~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||.||+|++. ++. .||+|.+..... ......+.+.+|+.++.+++||||+++++++.... .++|+
T Consensus 24 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---~~~v~ 99 (291)
T 1u46_A 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVL-SQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP---MKMVT 99 (291)
T ss_dssp EECC----CCCEEEEEECTTSCEEEEEEEC---------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS---CEEEE
T ss_pred eeecCCCceeEEEEEeccCCCceeEEEEEEEccCcc-CCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC---ceeeE
Confidence 78999999999999864 333 589998754321 12234567999999999999999999999998653 78999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
||+++|+|.+++.... ..+++.++.+++.|+++||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 100 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 100 ELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp ECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred ecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccccc
Confidence 9999999999996432 3589999999999999999999999 99999999999999999999999999988764
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=99.89 E-value=3.8e-23 Score=210.03 Aligned_cols=144 Identities=22% Similarity=0.240 Sum_probs=120.9
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCC----ceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF----TRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~----~~~lv 438 (521)
+.||+|+||.||+|+.. +|+.||||++.... ......+++.+|+.++.+++||||+++++++...+.. ..++|
T Consensus 48 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv 125 (371)
T 4exu_A 48 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF--QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV 125 (371)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEE
T ss_pred eEEecCCCeEEEEEEECCCCCEEEEEEecccc--cchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEE
Confidence 78999999999999986 68899999985432 2234456789999999999999999999999865521 23999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
|||++ |+|.+++. ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 126 ~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~ 196 (371)
T 4exu_A 126 MPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADA 196 (371)
T ss_dssp EECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC-----
T ss_pred Ecccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCccccccc
Confidence 99998 58988873 2389999999999999999999999 999999999999999999999999999986553
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-23 Score=213.89 Aligned_cols=148 Identities=9% Similarity=0.028 Sum_probs=108.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc--CCCCcccee-------eEEecCCC-
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI--NHENTGKLL-------GYCRESSP- 432 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l--~H~niv~l~-------g~~~~~~~- 432 (521)
+.||+|+||.||+|+.. +++.||||++...... .....+.+.+|+.++..+ +||||++++ +++.....
T Consensus 68 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~ 146 (371)
T 3q60_A 68 EPLRVGDRSVVFLVRDVERLEDFALKVFTMGAEN-SRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQP 146 (371)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEECCSTT-HHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSC
T ss_pred eeccCCCCEEEEEEEECCCCceeEEEEEEecccc-cccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCC
Confidence 78999999999999986 7889999998654321 233455678885544444 699988754 44432221
Q ss_pred --------------CceEEEEecCCCCChhhhhccCCCCCCCHHHH------HHHHHHHHHHHHHHhcCCCCCeEecCCC
Q 009965 433 --------------FTRMLVFDYASNGTLYEHLHYGERCQVSWTRR------MKIVIGIARGLKYLHTELGPPFTISELN 492 (521)
Q Consensus 433 --------------~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~------~~i~~~ia~gL~yLH~~~~~~ivH~Dlk 492 (521)
...++||||++ |+|.+++.... ..+++..+ ..++.|+++||+|||+. +|+|||||
T Consensus 147 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ivHrDik 221 (371)
T 3q60_A 147 PFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD-FVYVFRGDEGILALHILTAQLIRLAANLQSK---GLVHGHFT 221 (371)
T ss_dssp SSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEEETTCS
T ss_pred CeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCccCcCC
Confidence 13799999999 89999997432 23456666 78889999999999999 99999999
Q ss_pred CCCeeecCCCCeeeCCCchhhhccc
Q 009965 493 SSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 493 ~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
|+|||+++++.+||+|||+|+....
T Consensus 222 p~NIll~~~~~~kL~DFG~a~~~~~ 246 (371)
T 3q60_A 222 PDNLFIMPDGRLMLGDVSALWKVGT 246 (371)
T ss_dssp GGGEEECTTSCEEECCGGGEEETTC
T ss_pred HHHEEECCCCCEEEEecceeeecCC
Confidence 9999999999999999999987653
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.8e-23 Score=207.77 Aligned_cols=143 Identities=22% Similarity=0.248 Sum_probs=122.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC----CceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~lv 438 (521)
+.||+|+||.||+|+.. +|+.||||++.... ......+++.+|+.++.+++||||+++++++..... ...++|
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv 107 (353)
T 3coi_A 30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF--QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV 107 (353)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEESSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEE
T ss_pred eeEecCCCeEEEEEEECCCCCEEEEEEecccc--cchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEE
Confidence 78999999999999986 68899999985432 223345678999999999999999999999976541 134999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|||++ |+|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 108 ~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 177 (353)
T 3coi_A 108 MPFMQ-TDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 177 (353)
T ss_dssp EECCS-EEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred ecccc-CCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence 99998 599888742 389999999999999999999999 99999999999999999999999999998654
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=7.9e-24 Score=213.51 Aligned_cols=139 Identities=10% Similarity=0.169 Sum_probs=120.2
Q ss_pred chhCcCCCeeEEEEEeCC---------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccc------------
Q 009965 364 NIIGSSPDSLVYKGTMKG---------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGK------------ 422 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~---------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~------------ 422 (521)
+.||+|+||.||+|+... ++.||+|.+... +.+.+|++++.+++||||++
T Consensus 48 ~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~---------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 118 (352)
T 2jii_A 48 SFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD---------GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLA 118 (352)
T ss_dssp EEEEEETTEEEEEEEECC-----------CEEEEEEETT---------STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCS
T ss_pred EEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc---------chHHHHHHHHHHhcccchhhhhhhhccCCccC
Confidence 789999999999999864 788999997422 24789999999999999998
Q ss_pred ---eeeEEec-CCCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee
Q 009965 423 ---LLGYCRE-SSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL 498 (521)
Q Consensus 423 ---l~g~~~~-~~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLl 498 (521)
+++++.. .. ..++||||+ +|+|.+++.......+++.++..|+.|++.||+|||+. +|+||||||+|||+
T Consensus 119 i~~~~~~~~~~~~--~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl~ 192 (352)
T 2jii_A 119 IPTCMGFGVHQDK--YRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIFV 192 (352)
T ss_dssp CCCCCEEEEETTT--EEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEEE
T ss_pred ccchhhccccCCc--EEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEE
Confidence 6777765 33 789999999 89999999755345699999999999999999999999 99999999999999
Q ss_pred cCCC--CeeeCCCchhhhccc
Q 009965 499 TEDF--SPKVSPLCLSFLLVS 517 (521)
Q Consensus 499 d~~~--~~kl~DfGla~~~~~ 517 (521)
++++ .+||+|||+++.+..
T Consensus 193 ~~~~~~~~kl~Dfg~a~~~~~ 213 (352)
T 2jii_A 193 DPEDQSQVTLAGYGFAFRYCP 213 (352)
T ss_dssp ETTEEEEEEECCGGGCBCSSG
T ss_pred cCCCCceEEEecCcceeeccC
Confidence 9998 999999999987643
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.8e-23 Score=225.81 Aligned_cols=144 Identities=16% Similarity=0.229 Sum_probs=124.4
Q ss_pred chhCcCCCeeEEEEEeCC----CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||.||+|++.. +..||+|.+... ......+.|.+|+.++.+++||||+++++++.+. ..++||
T Consensus 396 ~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~---~~~lv~ 469 (656)
T 2j0j_A 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC---TSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN---PVWIIM 469 (656)
T ss_dssp EEEECCSSCCEEEEEECCSSSCCEEEEEEECSST---TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS---SCEEEE
T ss_pred eEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc---CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC---ceEEEE
Confidence 789999999999998853 346888886432 1234456799999999999999999999998543 579999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.+..
T Consensus 470 E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~~~ 543 (656)
T 2j0j_A 470 ELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 543 (656)
T ss_dssp ECCTTCBHHHHHHHTT-TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC
T ss_pred EcCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeecCC
Confidence 9999999999997433 3589999999999999999999999 999999999999999999999999999987653
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.1e-23 Score=213.71 Aligned_cols=142 Identities=15% Similarity=0.211 Sum_probs=116.3
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC----CceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~lv~ 439 (521)
++||+|+||.||+|+..++..+|+|++...... ..+|+.+++.++||||+++++++..... ...++||
T Consensus 46 ~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~--------~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~ 117 (394)
T 4e7w_A 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF--------KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVL 117 (394)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEEECCTTS--------CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEE
T ss_pred EEEeeCCCeEEEEEEECCCCeEEEEEEecCcch--------HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEe
Confidence 789999999999999987777999988543221 2369999999999999999999965331 1378999
Q ss_pred ecCCCCChhhhhc-cCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeec-CCCCeeeCCCchhhhcc
Q 009965 440 DYASNGTLYEHLH-YGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT-EDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~gsL~~~l~-~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld-~~~~~kl~DfGla~~~~ 516 (521)
||++++.+....+ ......+++..+..++.|+++||+|||+. +|+||||||+|||++ +++.+||+|||+|+.+.
T Consensus 118 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~ 193 (394)
T 4e7w_A 118 EYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI 193 (394)
T ss_dssp ECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred eccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCccccc
Confidence 9998743333322 12234689999999999999999999999 999999999999999 79999999999998754
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.6e-23 Score=227.89 Aligned_cols=143 Identities=16% Similarity=0.227 Sum_probs=120.8
Q ss_pred chhCcCCCeeEEEEEeC--CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCC---ceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK--GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF---TRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~--~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~---~~~lv 438 (521)
+.||+|+||.||+|+.. +++.||||.+.... .....+.+.+|+.++.+++||||+++++++...+.. ..|+|
T Consensus 86 ~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv 162 (681)
T 2pzi_A 86 GCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG---DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIV 162 (681)
T ss_dssp EEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC---CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEE
T ss_pred EEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC---CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEE
Confidence 78999999999999986 58899999874321 223456789999999999999999999999875511 16999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
|||+++++|.+++.. .++|.++..|+.||++||+|||+. +|+||||||+|||++++ .+||+|||+++.+..
T Consensus 163 ~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~ 233 (681)
T 2pzi_A 163 MEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS 233 (681)
T ss_dssp EECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEETTC
T ss_pred EEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchhccc
Confidence 999999999988753 589999999999999999999999 99999999999999986 899999999987654
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.89 E-value=7.4e-23 Score=206.78 Aligned_cols=155 Identities=17% Similarity=0.166 Sum_probs=114.6
Q ss_pred HHHHHHhhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecC
Q 009965 354 ELEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430 (521)
Q Consensus 354 ~l~~~~~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 430 (521)
+.....++|. +.||+|+||.||+|+.. ++..||||++...... ...+.+|+..+..++||||+++++++...
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~l~~l~h~niv~~~~~~~~~ 91 (360)
T 3e3p_A 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF-----RNRELQIMQDLAVLHHPNIVQLQSYFYTL 91 (360)
T ss_dssp HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC-----CCHHHHHHHHHHHHCCTTBCCEEEEEEEE
T ss_pred hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc-----cHHHHHHHHHHHhcCCCCcccHHHhhhcc
Confidence 3445556675 89999999999999986 6899999988443221 23467788889999999999999999653
Q ss_pred CC-----CceEEEEecCCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHh--cCCCCCeEecCCCCCCeeecC-
Q 009965 431 SP-----FTRMLVFDYASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLH--TELGPPFTISELNSSAVYLTE- 500 (521)
Q Consensus 431 ~~-----~~~~lv~ey~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH--~~~~~~ivH~Dlk~~NiLld~- 500 (521)
.. ...++||||+++ +|.+.+.. .....+++..+..++.|++.||+||| +. +|+||||||+|||++.
T Consensus 92 ~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~ 167 (360)
T 3e3p_A 92 GERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEA 167 (360)
T ss_dssp CSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETT
T ss_pred ccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCC
Confidence 31 127899999986 55544431 23345899999999999999999999 77 9999999999999997
Q ss_pred CCCeeeCCCchhhhccc
Q 009965 501 DFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 501 ~~~~kl~DfGla~~~~~ 517 (521)
++.+||+|||+++.+..
T Consensus 168 ~~~~kl~Dfg~a~~~~~ 184 (360)
T 3e3p_A 168 DGTLKLCDFGSAKKLSP 184 (360)
T ss_dssp TTEEEECCCTTCBCCCT
T ss_pred CCcEEEeeCCCceecCC
Confidence 89999999999987653
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.4e-23 Score=207.92 Aligned_cols=152 Identities=13% Similarity=0.109 Sum_probs=121.1
Q ss_pred Hhhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccc--hhhHHHHHHHHHHHhcc----CCCCccceeeEEec
Q 009965 359 CEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWT--GYLELYFQREVADLARI----NHENTGKLLGYCRE 429 (521)
Q Consensus 359 ~~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~--~~~~~~~~~E~~~l~~l----~H~niv~l~g~~~~ 429 (521)
.++|. +.||+|+||.||+|+.. +++.||||++........ ......+.+|+.++.++ +||||+++++++..
T Consensus 30 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~ 109 (312)
T 2iwi_A 30 EAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFET 109 (312)
T ss_dssp ---CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC--
T ss_pred hhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEec
Confidence 34454 88999999999999885 688999999854321100 01223466799999888 89999999999987
Q ss_pred CCCCceEEEEec-CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeec-CCCCeeeC
Q 009965 430 SSPFTRMLVFDY-ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT-EDFSPKVS 507 (521)
Q Consensus 430 ~~~~~~~lv~ey-~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld-~~~~~kl~ 507 (521)
.+ ..++|+|| +++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++ +++.+||+
T Consensus 110 ~~--~~~~v~e~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~ 182 (312)
T 2iwi_A 110 QE--GFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLI 182 (312)
T ss_dssp -----CEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEEC
T ss_pred CC--eEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEEE
Confidence 76 78999999 78999999997533 489999999999999999999999 999999999999999 88999999
Q ss_pred CCchhhhccc
Q 009965 508 PLCLSFLLVS 517 (521)
Q Consensus 508 DfGla~~~~~ 517 (521)
|||+++.+..
T Consensus 183 dfg~~~~~~~ 192 (312)
T 2iwi_A 183 DFGSGALLHD 192 (312)
T ss_dssp CCSSCEECCS
T ss_pred Ecchhhhccc
Confidence 9999987654
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=99.88 E-value=5.8e-23 Score=201.45 Aligned_cols=146 Identities=14% Similarity=0.226 Sum_probs=121.5
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceE
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
++|. +.||+|+||.||+|+.. +++.||||++...... +++.+|+.++..++|++++..++++.... ...+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~e~~~l~~l~~~~~i~~~~~~~~~~-~~~~ 81 (296)
T 4hgt_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH------PQLHIESKIYKMMQGGVGIPTIRWCGAEG-DYNV 81 (296)
T ss_dssp --CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C------CCHHHHHHHHHHHTTSTTCCCEEEEEEET-TEEE
T ss_pred CceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc------hHHHHHHHHHHHhcCCCCCCeeeeecCCC-CceE
Confidence 4454 78999999999999985 7889999986443221 24788999999999999888888775433 2689
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee---cCCCCeeeCCCchhh
Q 009965 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL---TEDFSPKVSPLCLSF 513 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLl---d~~~~~kl~DfGla~ 513 (521)
+||||+ +|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||+++
T Consensus 82 lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~ 156 (296)
T 4hgt_A 82 MVMELL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156 (296)
T ss_dssp EEEECC-CCBHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEEEcc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccce
Confidence 999999 889999996332 3589999999999999999999999 99999999999999 789999999999998
Q ss_pred hccc
Q 009965 514 LLVS 517 (521)
Q Consensus 514 ~~~~ 517 (521)
.+..
T Consensus 157 ~~~~ 160 (296)
T 4hgt_A 157 KYRD 160 (296)
T ss_dssp ECBC
T ss_pred eccC
Confidence 7654
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=7.4e-23 Score=205.06 Aligned_cols=142 Identities=11% Similarity=0.146 Sum_probs=115.9
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCC--CCceEEEEe
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS--PFTRMLVFD 440 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~--~~~~~lv~e 440 (521)
++||+|+||.||+|+.. +++.||||++.... ... .+....+..++||||+++++++.... ....++|||
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~---~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e 106 (336)
T 3fhr_A 35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KAR---QEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIME 106 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHH---HHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred eeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHH---HHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEe
Confidence 57999999999999997 68999999984311 111 22223456679999999999997522 114799999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC---CCCeeeCCCchhhhcc
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~---~~~~kl~DfGla~~~~ 516 (521)
|+++|+|.+++.......+++.++..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++...
T Consensus 107 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~ 182 (336)
T 3fhr_A 107 CMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT 182 (336)
T ss_dssp CCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-
T ss_pred ccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccceecc
Confidence 99999999999866556799999999999999999999999 9999999999999976 4569999999997654
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=99.88 E-value=9.5e-23 Score=200.02 Aligned_cols=142 Identities=14% Similarity=0.215 Sum_probs=121.5
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||||.+..... .+++.+|+.++..++|++++..++++..... ..++||||+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-~~~lv~e~~ 87 (296)
T 3uzp_A 15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK------HPQLHIESKIYKMMQGGVGIPTIRWCGAEGD-YNVMVMELL 87 (296)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEEESCSS------CCHHHHHHHHHHHHTTSTTCCCEEEEEEETT-EEEEEEECC
T ss_pred EEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc------hhHHHHHHHHHHHhhcCCCCCccccccCCCC-ceEEEEEec
Confidence 78999999999999984 788999998754322 2358899999999999998888877754332 679999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee---cCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL---TEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLl---d~~~~~kl~DfGla~~~~~ 517 (521)
+|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||+++.+..
T Consensus 88 -~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 88 -GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp -CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred -CCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 889999996332 3599999999999999999999999 99999999999999 5889999999999987654
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-22 Score=201.09 Aligned_cols=142 Identities=15% Similarity=0.150 Sum_probs=123.5
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC--CCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN--HENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~--H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+++..+++.||||.+..... .....+.+.+|+.++.+++ ||||+++++++...+ ..++|||
T Consensus 34 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~--~~~lv~e- 108 (313)
T 3cek_A 34 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIYMVME- 108 (313)
T ss_dssp EEEECCSSEEEEEEECTTCCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSS--EEEEEEC-
T ss_pred EEecCCCCEEEEEEEcCCCcEEEEEEeccccc--cccchHHHHHHHHHHHhccccCCceEEEEEEeecCC--EEEEEEe-
Confidence 78999999999999998899999999854332 2344567999999999997 599999999998877 7999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+.+|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+|||+++ +.+||+|||+++.+.
T Consensus 109 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~ 177 (313)
T 3cek_A 109 CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQ 177 (313)
T ss_dssp CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC--
T ss_pred cCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeecccccccc
Confidence 55789999997543 589999999999999999999999 9999999999999975 899999999998754
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.9e-23 Score=207.41 Aligned_cols=141 Identities=22% Similarity=0.351 Sum_probs=119.5
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|+..+ .+|+|.+...... ....+.+.+|+.++.+++||||+++++++.+.. ..++||||++
T Consensus 39 ~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~iv~e~~~ 112 (319)
T 2y4i_B 39 ELIGKGRFGQVYHGRWHG--EVAIRLIDIERDN--EDQLKAFKREVMAYRQTRHENVVLFMGACMSPP--HLAIITSLCK 112 (319)
T ss_dssp CBCCCSSSSEEEEEEESS--SEEEEECCCCSCC--CCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS--CEEEECBCCC
T ss_pred eEeccCCceEEEEEEEcC--eEEEEEeecCCCC--HHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC--ceEEEeeccc
Confidence 789999999999998865 4999988544321 122345788999999999999999999999876 7899999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
+|+|.+++... ...+++.++..++.|+++||+|||+. +|+||||||+||+++ ++.+||+|||+++..
T Consensus 113 ~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~ 179 (319)
T 2y4i_B 113 GRTLYSVVRDA-KIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSIS 179 (319)
T ss_dssp SEEHHHHTTSS-CCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC--
T ss_pred CCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccc
Confidence 99999999643 34589999999999999999999999 999999999999998 679999999997754
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=8.7e-23 Score=204.00 Aligned_cols=143 Identities=15% Similarity=0.194 Sum_probs=123.6
Q ss_pred chhCcCCCeeEEEEEe-C-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCC------ccceeeEEecCCCCce
Q 009965 364 NIIGSSPDSLVYKGTM-K-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN------TGKLLGYCRESSPFTR 435 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~-~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~g~~~~~~~~~~ 435 (521)
+.||+|+||.||+|.. . +++.||||++... ....+.+.+|+.++..++|++ ++++++++...+ ..
T Consensus 20 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~--~~ 92 (339)
T 1z57_A 20 DTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-----DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG--HI 92 (339)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEECSS-----HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT--EE
T ss_pred EEEecCCCeEEEEEEecCCCCcEEEEEEEecC-----CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC--cE
Confidence 7899999999999987 3 6789999998422 123457889999999887665 999999998877 89
Q ss_pred EEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC---------------
Q 009965 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE--------------- 500 (521)
Q Consensus 436 ~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~--------------- 500 (521)
++||||+ +|+|.+++......++++..+..++.|+++||+|||+. +|+||||||+|||++.
T Consensus 93 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~ 168 (339)
T 1z57_A 93 CIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDE 168 (339)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----CEE
T ss_pred EEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCcccccc
Confidence 9999999 78999999766555789999999999999999999999 9999999999999987
Q ss_pred ----CCCeeeCCCchhhhccc
Q 009965 501 ----DFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 501 ----~~~~kl~DfGla~~~~~ 517 (521)
++.+||+|||+++....
T Consensus 169 ~~~~~~~~kl~Dfg~~~~~~~ 189 (339)
T 1z57_A 169 RTLINPDIKVVDFGSATYDDE 189 (339)
T ss_dssp EEESCCCEEECCCSSCEETTS
T ss_pred ccccCCCceEeeCcccccCcc
Confidence 67899999999986543
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=99.88 E-value=4.9e-23 Score=204.91 Aligned_cols=147 Identities=12% Similarity=0.104 Sum_probs=124.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeecccc--chhhHHHHHHHHHHHhccC--CCCccceeeEEecCCCCceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW--TGYLELYFQREVADLARIN--HENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~--~~~~~~~~~~E~~~l~~l~--H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||.||+|+.. +++.||||.+....... .....+.+.+|+.++.+++ ||||+++++++...+ ..++|
T Consensus 49 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~--~~~lv 126 (320)
T 3a99_A 49 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD--SFVLI 126 (320)
T ss_dssp EECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS--EEEEE
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC--cEEEE
Confidence 78999999999999875 68899999985443211 0012245778999999996 599999999998877 78999
Q ss_pred EecCCC-CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeec-CCCCeeeCCCchhhhcc
Q 009965 439 FDYASN-GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT-EDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld-~~~~~kl~DfGla~~~~ 516 (521)
+||+.+ ++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+|||++ +++.+||+|||+++.+.
T Consensus 127 ~e~~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~ 201 (320)
T 3a99_A 127 LERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLK 201 (320)
T ss_dssp EECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred EEcCCCCccHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCccccccc
Confidence 999986 89999996433 589999999999999999999999 999999999999999 78999999999998765
Q ss_pred c
Q 009965 517 S 517 (521)
Q Consensus 517 ~ 517 (521)
.
T Consensus 202 ~ 202 (320)
T 3a99_A 202 D 202 (320)
T ss_dssp S
T ss_pred c
Confidence 4
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=8.7e-23 Score=208.84 Aligned_cols=131 Identities=18% Similarity=0.144 Sum_probs=108.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC--------CCCccceeeEEecC--CC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN--------HENTGKLLGYCRES--SP 432 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~--------H~niv~l~g~~~~~--~~ 432 (521)
+.||+|+||+||+|+.. +++.||||++... ....+.+.+|+.++..++ |+||+++++++... ..
T Consensus 43 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~ 117 (397)
T 1wak_A 43 RKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-----EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNG 117 (397)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTE
T ss_pred EEeeecCCeeEEEEEecCCCeEEEEEEEecC-----CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCC
Confidence 78999999999999876 6789999998432 233467889999999986 78899999998721 12
Q ss_pred CceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCC
Q 009965 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF 502 (521)
Q Consensus 433 ~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~ 502 (521)
...++||||+ +|++.+++.......+++..+..|+.|+++||+|||+.+ +|+||||||+|||++.++
T Consensus 118 ~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~ 184 (397)
T 1wak_A 118 THICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNE 184 (397)
T ss_dssp EEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCH
T ss_pred ceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccc
Confidence 2689999999 557777776554456999999999999999999999854 899999999999999775
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-22 Score=225.56 Aligned_cols=178 Identities=28% Similarity=0.416 Sum_probs=144.9
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|+|++|.+++.+|..+..+++|++|+|++|++++.+|..++.+++|++|+|++|+++|.+|..++++++|++|+|
T Consensus 466 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 545 (768)
T 3rgz_A 466 KTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDL 545 (768)
T ss_dssp TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEEC
T ss_pred CCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEEC
Confidence 46888999999998888888888999999999999998888888888899999999999988888888888888888888
Q ss_pred ccccCcccCchhhhC-----------------------------------------------------------------
Q 009965 150 QSNGLTGRLPAELGN----------------------------------------------------------------- 164 (521)
Q Consensus 150 s~N~l~g~~p~~~~~----------------------------------------------------------------- 164 (521)
++|+++|.+|..+..
T Consensus 546 s~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~ 625 (768)
T 3rgz_A 546 NTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTS 625 (768)
T ss_dssp CSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECC
T ss_pred CCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCc
Confidence 888888877765432
Q ss_pred -----CCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCc-----ccCCCCCCEEeccCCccccCCcccccc-
Q 009965 165 -----LISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCLEY- 233 (521)
Q Consensus 165 -----l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~-----~~~l~~L~~L~ls~N~l~g~ip~~l~~- 233 (521)
+++|++|||++|+++|.+|..... ...+..+++++|.+++ +..+++|+.||||+|+++|.+|..+..
T Consensus 626 ~~~~~l~~L~~LdLs~N~l~g~ip~~l~~--l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l 703 (768)
T 3rgz_A 626 PTFDNNGSMMFLDMSYNMLSGYIPKEIGS--MPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSAL 703 (768)
T ss_dssp CSCSSSBCCCEEECCSSCCBSCCCGGGGG--CTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGC
T ss_pred hhhhccccccEEECcCCcccccCCHHHhc--cccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCC
Confidence 467888899999998888875432 3467778888888875 456888889999999998888877654
Q ss_pred --CCCcccCCCcCCCCCC
Q 009965 234 --LPSTSFQGNCLQNKDP 249 (521)
Q Consensus 234 --l~~l~~~~N~l~~~~~ 249 (521)
|+.+++++|++++..|
T Consensus 704 ~~L~~L~ls~N~l~g~iP 721 (768)
T 3rgz_A 704 TMLTEIDLSNNNLSGPIP 721 (768)
T ss_dssp CCCSEEECCSSEEEEECC
T ss_pred CCCCEEECcCCcccccCC
Confidence 4567888888876654
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.88 E-value=4.8e-22 Score=190.62 Aligned_cols=184 Identities=21% Similarity=0.275 Sum_probs=138.8
Q ss_pred CCCCccceeeCCCCCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCC
Q 009965 56 DPCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP 135 (521)
Q Consensus 56 ~~c~w~gv~C~~~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p 135 (521)
+||.|.|.+|.. ..+.++++++.++. +|..+. +.|+.|+|++|++++..|..|..+++|++|+|++|++++..|
T Consensus 3 ~Cp~~~gC~C~~---~~~~l~~~~~~l~~-~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 76 (251)
T 3m19_A 3 TCETVTGCTCNE---GKKEVDCQGKSLDS-VPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSA 76 (251)
T ss_dssp -CHHHHSSEEEG---GGTEEECTTCCCSS-CCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCT
T ss_pred cCCCCCceEcCC---CCeEEecCCCCccc-cCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCH
Confidence 477899999952 34568888888875 555554 578888888888887777778888888888888888887777
Q ss_pred cccCCCccCceeecccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc-----cCC
Q 009965 136 PEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHL 210 (521)
Q Consensus 136 ~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~l 210 (521)
..|.++++|++|+|++|++++..|..|..+++|++|+|++|++++ +|...+.. ...+..+++++|.++++ ..+
T Consensus 77 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~~~l 154 (251)
T 3m19_A 77 GVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKS-LPSGVFDR-LTKLKELRLNTNQLQSIPAGAFDKL 154 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTT-CTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred hHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCC-cChhHhcc-CCcccEEECcCCcCCccCHHHcCcC
Confidence 778888888888888888887666777888888888888888874 44332211 24677778888877653 457
Q ss_pred CCCCEEeccCCccccCCcccc---ccCCCcccCCCcCCCC
Q 009965 211 SQLKVADFSYNFFVGSIPKCL---EYLPSTSFQGNCLQNK 247 (521)
Q Consensus 211 ~~L~~L~ls~N~l~g~ip~~l---~~l~~l~~~~N~l~~~ 247 (521)
++|+.|+|++|++++..|..+ .+|+.+++++|++.+.
T Consensus 155 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 155 TNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred cCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 889999999999997666555 4567788999988775
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.1e-22 Score=210.98 Aligned_cols=141 Identities=14% Similarity=0.164 Sum_probs=118.0
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCcc-ceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG-KLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~g~~~~~~~~~~~lv~ey 441 (521)
++||+|+||.||+|+.. +++.||||++..+... +++.+|++++..++|++.+ .+..++.... ..++||||
T Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~------~~~~~E~~il~~L~~~~~i~~i~~~~~~~~--~~~lvme~ 84 (483)
T 3sv0_A 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH------PQLLYESKIYRILQGGTGIPNVRWFGVEGD--YNVLVMDL 84 (483)
T ss_dssp CCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS------CCHHHHHHHHHHTTTSTTCCCEEEEEEETT--EEEEEEEC
T ss_pred EEEeeCCCEEEEEEEECCCCcEEEEEEecccccc------HHHHHHHHHHHHhcCCCCCCeEEEEEeeCC--EEEEEEEC
Confidence 78999999999999985 7899999987543221 2478999999999875544 4444555544 78999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee---cCCCCeeeCCCchhhhccc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL---TEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLl---d~~~~~kl~DfGla~~~~~ 517 (521)
+ +|+|.+++.... ..+++.++..|+.||+.||+|||+. +|+||||||+|||+ ++++.+||+|||+++.+..
T Consensus 85 ~-g~sL~~ll~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (483)
T 3sv0_A 85 L-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD 158 (483)
T ss_dssp C-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred C-CCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence 9 889999997432 3599999999999999999999999 99999999999999 6889999999999987654
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.5e-22 Score=215.05 Aligned_cols=136 Identities=11% Similarity=0.089 Sum_probs=109.1
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeecccc----chhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHW----TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
++||+|+||.||+|+. .+..+++|+...+.... .....++|.+|++++.+++||||+++..++...+ ..++||
T Consensus 342 ~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~--~~~lVm 418 (540)
T 3en9_A 342 HLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLD--NKRIMM 418 (540)
T ss_dssp ------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETT--TTEEEE
T ss_pred CEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCC--ccEEEE
Confidence 6899999999999954 56788999875443211 1122456899999999999999997777776655 679999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
||+++|+|.+++.. +..|+.|+++||+|||+. +|+||||||+|||+++ .+||+|||+++.+.+
T Consensus 419 E~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 419 SYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp ECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred ECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 99999999999963 568999999999999999 9999999999999999 999999999998754
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=99.87 E-value=7.4e-23 Score=202.98 Aligned_cols=173 Identities=27% Similarity=0.407 Sum_probs=136.3
Q ss_pred CCEEEEEecC-CCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceee
Q 009965 70 DRVLKINISG-SSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 70 ~~l~~L~L~~-n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
.+++.|+|++ |.+.+.+|..|+.+++|++|+|++|++++.+|..|..+++|++|+|++|++++.+|..|..+++|++|+
T Consensus 76 ~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 155 (313)
T 1ogq_A 76 PYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGIT 155 (313)
T ss_dssp TTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEE
T ss_pred CCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEE
Confidence 5789999995 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCcccCchhhhCCC-CCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCc-----ccCCCCCCEEeccCCc
Q 009965 149 LQSNGLTGRLPAELGNLI-SLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNF 222 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~-----~~~l~~L~~L~ls~N~ 222 (521)
|++|++++.+|..++.++ +|++|+|++|++++.+|..... ..+..+++++|.+++ +..+++|+.|++++|+
T Consensus 156 L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~---l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 232 (313)
T 1ogq_A 156 FDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFAN---LNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNS 232 (313)
T ss_dssp CCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGG---CCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSE
T ss_pred CcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhC---CcccEEECcCCcccCcCCHHHhcCCCCCEEECCCCc
Confidence 999999999999999998 9999999999999888864332 125555666655542 2334555555555555
Q ss_pred cccCCcc--ccccCCCcccCCCcCC
Q 009965 223 FVGSIPK--CLEYLPSTSFQGNCLQ 245 (521)
Q Consensus 223 l~g~ip~--~l~~l~~l~~~~N~l~ 245 (521)
+++.+|. .+.+|+.+++++|.+.
T Consensus 233 l~~~~~~~~~l~~L~~L~Ls~N~l~ 257 (313)
T 1ogq_A 233 LAFDLGKVGLSKNLNGLDLRNNRIY 257 (313)
T ss_dssp ECCBGGGCCCCTTCCEEECCSSCCE
T ss_pred eeeecCcccccCCCCEEECcCCccc
Confidence 5544443 1233444455555444
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.1e-22 Score=198.46 Aligned_cols=144 Identities=15% Similarity=0.104 Sum_probs=109.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||.||+|+.. +++.||||.+..... .....+.+.++..++..++||||+++++++...+ ..++||||+
T Consensus 31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~--~~~lv~e~~ 106 (318)
T 2dyl_A 31 GEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGN--KEENKRILMDLDVVLKSHDCPYIVQCFGTFITNT--DVFIAMELM 106 (318)
T ss_dssp EEC------CEEEEEETTTCCEEEEEEEETTSC--HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred ceeeecCCeeEEEEEEecCCeEEEEEEeccccc--chHHHHHHHHHHHHHHhcCCCceeeEEEEEecCC--cEEEEEecc
Confidence 78999999999999996 789999999854321 1222334555556788889999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++.+..+.. .....+++..+..++.++++||+|||+ . +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 107 -~~~~~~l~~-~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 176 (318)
T 2dyl_A 107 -GTCAEKLKK-RMQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLV 176 (318)
T ss_dssp -SEEHHHHHH-HHTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred -CCcHHHHHH-HhccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence 445554443 223458999999999999999999998 5 89999999999999999999999999997654
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.4e-22 Score=185.99 Aligned_cols=175 Identities=22% Similarity=0.283 Sum_probs=140.8
Q ss_pred CCCccceeeCCC---------CCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccC
Q 009965 57 PCHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGT 127 (521)
Q Consensus 57 ~c~w~gv~C~~~---------~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 127 (521)
.|.|+++.|... ..+++.|+|++|.+++..+..+..+++|++|+|++|++++..+..|..+++|++|+|++
T Consensus 6 ~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 6 SCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 478999999742 24689999999999987777789999999999999999977777789999999999999
Q ss_pred CcCCCCCCcccCCCccCceeecccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc
Q 009965 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL 207 (521)
Q Consensus 128 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~ 207 (521)
|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++ +|...... ..++..+++++|.+.+
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~-l~~L~~L~l~~N~~~~- 162 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKS-VPDGVFDR-LTSLQYIWLHDNPWDC- 162 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC-CCTTTTTT-CTTCCEEECCSCCBCC-
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccce-eCHHHhcc-CCCccEEEecCCCeec-
Confidence 99997777778999999999999999997777778999999999999999995 44322211 2456667777776553
Q ss_pred cCCCCCCEEeccCCccccCCccccccCC
Q 009965 208 CHLSQLKVADFSYNFFVGSIPKCLEYLP 235 (521)
Q Consensus 208 ~~l~~L~~L~ls~N~l~g~ip~~l~~l~ 235 (521)
.+++|+.|+++.|+++|.+|..++.++
T Consensus 163 -~~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 163 -TCPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp -CTTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred -CCCCHHHHHHHHHhCCceeeccCcccc
Confidence 344677777777777777776666554
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.3e-22 Score=210.43 Aligned_cols=141 Identities=16% Similarity=0.128 Sum_probs=115.2
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
++||+|+||+||.+...+|+.||||++... ..+.+.+|+.++.++ +|||||++++++.+.. ..++||||+
T Consensus 21 ~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~-------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~--~~~lv~E~~ 91 (434)
T 2rio_A 21 KILGYGSSGTVVFQGSFQGRPVAVKRMLID-------FCDIALMEIKLLTESDDHPNVIRYYCSETTDR--FLYIALELC 91 (434)
T ss_dssp EEEEECSTTCEEEEEESSSSEEEEEEEEGG-------GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSS--EEEEEECCC
T ss_pred CeEeeCCCeEEEEEEEECCeEEEEEEEcHH-------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCC--eEEEEEecC
Confidence 689999999998776678999999988432 124578899999887 8999999999998776 899999999
Q ss_pred CCCChhhhhccCCCCC-----CCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCC-------------CCe
Q 009965 443 SNGTLYEHLHYGERCQ-----VSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED-------------FSP 504 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~-----l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~-------------~~~ 504 (521)
+ |+|.+++....... .++..+..|+.||+.||+|||+. +|+||||||+|||++.+ +.+
T Consensus 92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~ 167 (434)
T 2rio_A 92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167 (434)
T ss_dssp S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEE
Confidence 6 69999997543211 13345678999999999999999 99999999999999754 489
Q ss_pred eeCCCchhhhccc
Q 009965 505 KVSPLCLSFLLVS 517 (521)
Q Consensus 505 kl~DfGla~~~~~ 517 (521)
||+|||+++.+..
T Consensus 168 kL~DFG~a~~~~~ 180 (434)
T 2rio_A 168 LISDFGLCKKLDS 180 (434)
T ss_dssp EECCCTTCEECCC
T ss_pred EEcccccceecCC
Confidence 9999999987654
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3.8e-22 Score=198.87 Aligned_cols=146 Identities=14% Similarity=0.098 Sum_probs=120.5
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHH-HHhccCCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVA-DLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||.||+|+.. +++.||||++..... .....++..|+. +++.++||||+++++++...+ ..++||||
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~--~~~lv~e~ 102 (327)
T 3aln_A 28 GEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD---EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREG--DCWICMEL 102 (327)
T ss_dssp CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC---HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSS--EEEEEECC
T ss_pred heeccCCCEEEEEEEEcCCCCEEEEEEeecccC---chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCC--ceEEEEee
Confidence 68999999999999986 688999999854321 223345666666 777889999999999998876 88999999
Q ss_pred CCCCChhhhhcc---CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 442 ASNGTLYEHLHY---GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 442 ~~~gsL~~~l~~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
+++ +|.+++.. .....+++..+.+++.++++||.|||+. ++|+||||||+||+++.++.+||+|||+++.+..
T Consensus 103 ~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 178 (327)
T 3aln_A 103 MST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD 178 (327)
T ss_dssp CSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCSSSCC---
T ss_pred cCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCCCceeccc
Confidence 985 88887752 2234689999999999999999999984 2799999999999999999999999999986543
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3.6e-22 Score=203.63 Aligned_cols=149 Identities=21% Similarity=0.146 Sum_probs=123.4
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CC-----CccceeeEEecC
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HE-----NTGKLLGYCRES 430 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~-----niv~l~g~~~~~ 430 (521)
++|. +.||+|+||+||+|+.. +++.||||++... ....+++..|+.++..++ |+ +|+++++++...
T Consensus 54 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 128 (382)
T 2vx3_A 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-----KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR 128 (382)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-----HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred eeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-----HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence 4454 78999999999999987 6788999998432 123456788898888885 55 499999999887
Q ss_pred CCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeec--CCCCeeeCC
Q 009965 431 SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT--EDFSPKVSP 508 (521)
Q Consensus 431 ~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld--~~~~~kl~D 508 (521)
+ ..++||||++ |+|.+++.......+++..+..++.|++.||+|||.. ..+|+||||||+|||++ .++.+||+|
T Consensus 129 ~--~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~D 204 (382)
T 2vx3_A 129 N--HLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVD 204 (382)
T ss_dssp T--EEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECC
T ss_pred C--ceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEe
Confidence 7 8999999996 5999999765545699999999999999999999952 23899999999999994 578899999
Q ss_pred Cchhhhccc
Q 009965 509 LCLSFLLVS 517 (521)
Q Consensus 509 fGla~~~~~ 517 (521)
||+++.+..
T Consensus 205 FG~a~~~~~ 213 (382)
T 2vx3_A 205 FGSSCQLGQ 213 (382)
T ss_dssp CTTCEETTC
T ss_pred ccCceeccc
Confidence 999987653
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=4e-22 Score=200.58 Aligned_cols=143 Identities=13% Similarity=0.166 Sum_probs=121.8
Q ss_pred chhCcCCCeeEEEEEeC-CC-CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCC------ccceeeEEecCCCCce
Q 009965 364 NIIGSSPDSLVYKGTMK-GG-PEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN------TGKLLGYCRESSPFTR 435 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~-~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~g~~~~~~~~~~ 435 (521)
+.||+|+||+||+|+.. ++ ..||+|++... ....+.+.+|+.++.+++|++ ++.+.+++.... ..
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~--~~ 97 (355)
T 2eu9_A 25 GNLGEGTFGKVVECLDHARGKSQVALKIIRNV-----GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG--HM 97 (355)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT--EE
T ss_pred EEeeccCCeEEEEEEecCCCceEEEEEEEccc-----ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC--eE
Confidence 78999999999999985 44 68999998422 233467889999999998766 899999998776 89
Q ss_pred EEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee-----------------
Q 009965 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL----------------- 498 (521)
Q Consensus 436 ~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLl----------------- 498 (521)
++||||+ +|++.+++.......+++.++..|+.|++.||+|||+. +|+||||||+|||+
T Consensus 98 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~ 173 (355)
T 2eu9_A 98 CIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEE 173 (355)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CCCE
T ss_pred EEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccccccccc
Confidence 9999999 56788887655545699999999999999999999998 99999999999999
Q ss_pred --cCCCCeeeCCCchhhhccc
Q 009965 499 --TEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 499 --d~~~~~kl~DfGla~~~~~ 517 (521)
+.++.+||+|||+++....
T Consensus 174 ~~~~~~~~kl~Dfg~~~~~~~ 194 (355)
T 2eu9_A 174 KSVKNTSIRVADFGSATFDHE 194 (355)
T ss_dssp EEESCCCEEECCCTTCEETTS
T ss_pred cccCCCcEEEeecCccccccc
Confidence 6788999999999986543
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.5e-22 Score=217.21 Aligned_cols=148 Identities=17% Similarity=0.174 Sum_probs=126.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecC----CCCceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES----SPFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~----~~~~~~lv 438 (521)
+.||+|+||.||+|... +|+.||||++... ......+.+.+|++++.+++||||+++++++... .....++|
T Consensus 20 ~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~---~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LV 96 (676)
T 3qa8_A 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE---LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLA 96 (676)
T ss_dssp CCCCBCSSSBCCCCCCTTTTCCEEECCCCSC---CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCE
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEeccc---CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEE
Confidence 89999999999999885 6889999987432 2234456799999999999999999999997651 12267999
Q ss_pred EecCCCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCC---eeeCCCchhhh
Q 009965 439 FDYASNGTLYEHLHYGE-RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS---PKVSPLCLSFL 514 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~---~kl~DfGla~~ 514 (521)
|||+++|+|.+++.... ...+++..+..|+.+++.||+|||+. +|+||||||+||+++.++. +||+|||+++.
T Consensus 97 mEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~ 173 (676)
T 3qa8_A 97 MEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE 173 (676)
T ss_dssp EECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCCCCCB
T ss_pred EEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcccccccc
Confidence 99999999999997533 23589999999999999999999998 9999999999999997665 89999999987
Q ss_pred ccc
Q 009965 515 LVS 517 (521)
Q Consensus 515 ~~~ 517 (521)
+..
T Consensus 174 ~~~ 176 (676)
T 3qa8_A 174 LDQ 176 (676)
T ss_dssp TTS
T ss_pred ccc
Confidence 654
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.2e-22 Score=208.32 Aligned_cols=139 Identities=15% Similarity=0.199 Sum_probs=114.2
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
++||+|+||+||.....+++.||||++..... ..+.+|+.++.++ +|||||++++++.+.. ..++||||+
T Consensus 30 ~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~--~~~lv~E~~ 100 (432)
T 3p23_A 30 DVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-------SFADREVQLLRESDEHPNVIRYFCTEKDRQ--FQYIAIELC 100 (432)
T ss_dssp EEEEECGGGCEEEEEESSSSEEEEEEECTTTE-------EECHHHHHHHHHSCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred CeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-------HHHHHHHHHHHhccCCCCcCeEEEEEecCC--EEEEEEECC
Confidence 78999999996655556789999999843221 1256899999999 8999999999998877 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC-----CCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-----DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~-----~~~~kl~DfGla~~~~ 516 (521)
+ |+|.+++.... ....+..+..++.||++||+|||+. +|+||||||+|||++. ...+||+|||+++.+.
T Consensus 101 ~-g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~ 174 (432)
T 3p23_A 101 A-ATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA 174 (432)
T ss_dssp S-EEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-
T ss_pred C-CCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeecc
Confidence 7 59999997443 2345556778999999999999999 9999999999999943 3468899999998764
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=5.4e-22 Score=193.48 Aligned_cols=134 Identities=10% Similarity=0.051 Sum_probs=108.8
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeecccc--------------chhhHHHHHHHHHHHhccCCCCccceeeEEec
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHW--------------TGYLELYFQREVADLARINHENTGKLLGYCRE 429 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~--------------~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~ 429 (521)
+.||+|+||.||+|+..+|+.||+|.+....... .......+.+|+.++.+++ | +++.+++..
T Consensus 96 ~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~~ 172 (282)
T 1zar_A 96 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYAW 172 (282)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEEE
T ss_pred CEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEec
Confidence 7899999999999999778999999985332110 0123567999999999999 5 677776644
Q ss_pred CCCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCC
Q 009965 430 SSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPL 509 (521)
Q Consensus 430 ~~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~Df 509 (521)
. ..++||||+++|+|.+ +.. .....++.|+++||+|||+. +|+||||||+|||++ ++.+||+||
T Consensus 173 ~---~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~vkl~DF 236 (282)
T 1zar_A 173 E---GNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGIWIIDF 236 (282)
T ss_dssp E---TTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEEEECCC
T ss_pred c---ceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcEEEEEC
Confidence 3 5699999999999998 531 12346999999999999998 999999999999999 999999999
Q ss_pred chhhhcc
Q 009965 510 CLSFLLV 516 (521)
Q Consensus 510 Gla~~~~ 516 (521)
|+|+...
T Consensus 237 G~a~~~~ 243 (282)
T 1zar_A 237 PQSVEVG 243 (282)
T ss_dssp TTCEETT
T ss_pred CCCeECC
Confidence 9998654
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=99.86 E-value=6.2e-22 Score=200.90 Aligned_cols=146 Identities=16% Similarity=0.144 Sum_probs=122.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-----------CCCccceeeEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-----------HENTGKLLGYCRESS 431 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----------H~niv~l~g~~~~~~ 431 (521)
+.||+|+||.||+|+.. +++.||||.+... ....+.+.+|+.++.+++ ||||+++++++...+
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~ 99 (373)
T 1q8y_A 25 RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-----KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKG 99 (373)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEE
T ss_pred EeeeecCCeEEEEEEecCCCcEEEEEEecCC-----ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccC
Confidence 78999999999999985 7889999998432 123456889999999886 899999999987532
Q ss_pred --CCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeec------CCCC
Q 009965 432 --PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT------EDFS 503 (521)
Q Consensus 432 --~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld------~~~~ 503 (521)
....++||||+ +++|.+++.......+++..+..|+.|++.||+|||+.+ +|+||||||+|||++ ..+.
T Consensus 100 ~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~~~~~ 176 (373)
T 1q8y_A 100 PNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQ 176 (373)
T ss_dssp TTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTTEEE
T ss_pred CCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCcCcce
Confidence 12579999999 889999997655556999999999999999999999853 899999999999994 4458
Q ss_pred eeeCCCchhhhccc
Q 009965 504 PKVSPLCLSFLLVS 517 (521)
Q Consensus 504 ~kl~DfGla~~~~~ 517 (521)
+||+|||+++.+..
T Consensus 177 ~kl~Dfg~a~~~~~ 190 (373)
T 1q8y_A 177 IKIADLGNACWYDE 190 (373)
T ss_dssp EEECCCTTCEETTB
T ss_pred EEEcccccccccCC
Confidence 99999999987654
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-20 Score=184.28 Aligned_cols=178 Identities=22% Similarity=0.211 Sum_probs=150.9
Q ss_pred CCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCc-CCCCCCcccCCCccCcee
Q 009965 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQ-LTGPIPPEIGNLTGLVKI 147 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~~L~~L 147 (521)
..+++.|+|++|.+++..+..|..+++|++|+|++|.+++..|..|..+++|++|+|++|. ++...|..|..+++|++|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 3578999999999999877889999999999999999998889999999999999999997 776668899999999999
Q ss_pred ecccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCc-----ccCCCCCCEEeccCCc
Q 009965 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNF 222 (521)
Q Consensus 148 ~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~-----~~~l~~L~~L~ls~N~ 222 (521)
+|++|.+++..|..|.++++|++|+|++|++++..+..... ..++..+++++|.+++ +..+++|+.|++++|.
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 188 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRD--LGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNR 188 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT--CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhcc--CCCccEEECCCCcccccCHHHhcCccccCEEECCCCc
Confidence 99999999888889999999999999999998544332211 2578888999998875 4457899999999999
Q ss_pred cccCCccccc---cCCCcccCCCcCCCCC
Q 009965 223 FVGSIPKCLE---YLPSTSFQGNCLQNKD 248 (521)
Q Consensus 223 l~g~ip~~l~---~l~~l~~~~N~l~~~~ 248 (521)
+++..|..+. +|+.+++++|.+....
T Consensus 189 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 217 (285)
T 1ozn_A 189 VAHVHPHAFRDLGRLMTLYLFANNLSALP 217 (285)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred ccccCHhHccCcccccEeeCCCCcCCcCC
Confidence 9988787664 5677889999887643
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.8e-20 Score=183.10 Aligned_cols=179 Identities=19% Similarity=0.154 Sum_probs=154.4
Q ss_pred CCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCc-ccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCcee
Q 009965 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNN-LIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 147 (521)
..+++.|+|++|.+++..|..|..+++|++|+|++|. +....|..|..+++|++|+|++|++++..|..|.++++|++|
T Consensus 55 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 134 (285)
T 1ozn_A 55 CRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYL 134 (285)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEE
Confidence 3579999999999999889999999999999999997 887778899999999999999999998889999999999999
Q ss_pred ecccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCc-----ccCCCCCCEEeccCCc
Q 009965 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNF 222 (521)
Q Consensus 148 ~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~-----~~~l~~L~~L~ls~N~ 222 (521)
+|++|++++..+..|..+++|++|+|++|++++..+..... ..++..+++++|.+++ +..+++|+.|++++|+
T Consensus 135 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 212 (285)
T 1ozn_A 135 YLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRG--LHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANN 212 (285)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTT--CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred ECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcC--ccccCEEECCCCcccccCHhHccCcccccEeeCCCCc
Confidence 99999999777777999999999999999999544332221 3578889999998875 4568899999999999
Q ss_pred cccCCcccc---ccCCCcccCCCcCCCCCC
Q 009965 223 FVGSIPKCL---EYLPSTSFQGNCLQNKDP 249 (521)
Q Consensus 223 l~g~ip~~l---~~l~~l~~~~N~l~~~~~ 249 (521)
+++..|..+ .+|+.+++++|++.+.++
T Consensus 213 l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 242 (285)
T 1ozn_A 213 LSALPTEALAPLRALQYLRLNDNPWVCDCR 242 (285)
T ss_dssp CSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred CCcCCHHHcccCcccCEEeccCCCccCCCC
Confidence 997666554 556778999998887654
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.4e-20 Score=176.23 Aligned_cols=153 Identities=27% Similarity=0.334 Sum_probs=128.4
Q ss_pred CCCCCCccceeeCC---------CCCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEE
Q 009965 54 DADPCHWTGIACSD---------ARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILD 124 (521)
Q Consensus 54 ~~~~c~w~gv~C~~---------~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 124 (521)
....|+|++|.|.. ...+++.|+|++|.+++..|..|..+++|++|+|++|+|+...+..|..+++|++|+
T Consensus 15 ~~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~ 94 (229)
T 3e6j_A 15 SQCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLD 94 (229)
T ss_dssp TTCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEE
Confidence 34689999999974 134688999999999998888899999999999999999876667788999999999
Q ss_pred ccCCcCCCCCCcccCCCccCceeecccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCc
Q 009965 125 LGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANL 204 (521)
Q Consensus 125 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l 204 (521)
|++|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|++|+|++|++++ +|..
T Consensus 95 Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~-~~~~------------------- 153 (229)
T 3e6j_A 95 LGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKS-IPHG------------------- 153 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCC-CCTT-------------------
T ss_pred CCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCc-cCHH-------------------
Confidence 9999999777777889999999999999999 788889999999999999999983 4432
Q ss_pred CcccCCCCCCEEeccCCccccCCc
Q 009965 205 TGLCHLSQLKVADFSYNFFVGSIP 228 (521)
Q Consensus 205 ~~~~~l~~L~~L~ls~N~l~g~ip 228 (521)
.+..+++|+.|++++|.+.+..+
T Consensus 154 -~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 154 -AFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp -TTTTCTTCCEEECTTSCBCTTBG
T ss_pred -HHhCCCCCCEEEeeCCCccCCcc
Confidence 23457789999999999986654
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.3e-20 Score=187.97 Aligned_cols=175 Identities=18% Similarity=0.257 Sum_probs=150.7
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCC---------
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGN--------- 140 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~--------- 140 (521)
.+++.|+|++|.++ .+|..++.+++|++|+|++|+++ .+|..+..+++|++|+|++|++.+.+|..+..
T Consensus 104 ~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~ 181 (328)
T 4fcg_A 104 SHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQG 181 (328)
T ss_dssp TTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEE
T ss_pred CCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhcc
Confidence 47999999999999 78999999999999999999999 78999999999999999999999999988765
Q ss_pred CccCceeecccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCc-----ccCCCCCCE
Q 009965 141 LTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKV 215 (521)
Q Consensus 141 l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~-----~~~l~~L~~ 215 (521)
+++|++|+|++|+++ .+|..++++++|++|+|++|++++ +|.... ...++..+++++|++.+ +..+++|+.
T Consensus 182 l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~--~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~ 257 (328)
T 4fcg_A 182 LVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIH--HLPKLEELDLRGCTALRNYPPIFGGRAPLKR 257 (328)
T ss_dssp STTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGG--GCTTCCEEECTTCTTCCBCCCCTTCCCCCCE
T ss_pred CCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-Cchhhc--cCCCCCEEECcCCcchhhhHHHhcCCCCCCE
Confidence 999999999999999 899999999999999999999995 554321 23578888999987754 456889999
Q ss_pred EeccCCccccCCccccc---cCCCcccCCCcCCCCCCc
Q 009965 216 ADFSYNFFVGSIPKCLE---YLPSTSFQGNCLQNKDPK 250 (521)
Q Consensus 216 L~ls~N~l~g~ip~~l~---~l~~l~~~~N~l~~~~~~ 250 (521)
|++++|++.+.+|..+. +|+.+++++|++.+..|.
T Consensus 258 L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~ 295 (328)
T 4fcg_A 258 LILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPS 295 (328)
T ss_dssp EECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCG
T ss_pred EECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccH
Confidence 99999999999997764 456788999987775543
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.84 E-value=5.4e-20 Score=176.29 Aligned_cols=156 Identities=25% Similarity=0.237 Sum_probs=138.1
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
..++.|+|++|.+++..+..|..+++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|..+++|++|+|
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 47899999999999988889999999999999999999988888999999999999999999888888999999999999
Q ss_pred ccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc-----cCCCCCCEEeccCCccc
Q 009965 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFV 224 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~l~~L~~L~ls~N~l~ 224 (521)
++|++++..+..|..+++|++|+|++|++++..+..... ..++..+++++|.++++ ..+++|+.|++++|.++
T Consensus 115 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 192 (251)
T 3m19_A 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDK--LTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFD 192 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT--CTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred CCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCc--CcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCcee
Confidence 999999777777899999999999999999544432221 25788999999998764 45789999999999998
Q ss_pred cCC
Q 009965 225 GSI 227 (521)
Q Consensus 225 g~i 227 (521)
+..
T Consensus 193 c~~ 195 (251)
T 3m19_A 193 CSR 195 (251)
T ss_dssp TTS
T ss_pred CCc
Confidence 763
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.83 E-value=5.6e-21 Score=196.85 Aligned_cols=149 Identities=12% Similarity=0.087 Sum_probs=111.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCC-CCcccee---------eE------
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH-ENTGKLL---------GY------ 426 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~---------g~------ 426 (521)
++||+|+||+||+|+.. +|+.||||++..... ......+.|.+|+.++..++| +|..... ..
T Consensus 84 ~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~-~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (413)
T 3dzo_A 84 TVLGQEDPYAYLEATDQETGESFEVHVPYFTER-PPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 162 (413)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEECCSCC-----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC-
T ss_pred cccccCCCEEEEEEEecCCCCceEEEEEecCCC-ccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCC
Confidence 78999999999999975 789999998753322 122335679999999999987 3222111 11
Q ss_pred ------EecCC---CCceEEEEecCCCCChhhhhc-----cCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCC
Q 009965 427 ------CRESS---PFTRMLVFDYASNGTLYEHLH-----YGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELN 492 (521)
Q Consensus 427 ------~~~~~---~~~~~lv~ey~~~gsL~~~l~-----~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk 492 (521)
+.... ....+++|+++ +|+|.+++. ......++|..+..|+.|+++||+|||+. +|+|||||
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iiHrDiK 238 (413)
T 3dzo_A 163 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYLR 238 (413)
T ss_dssp --------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCCC
T ss_pred CccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcc
Confidence 11110 11346666665 579999884 23344688999999999999999999999 99999999
Q ss_pred CCCeeecCCCCeeeCCCchhhhccc
Q 009965 493 SSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 493 ~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
|+|||++.++.+||+|||+++....
T Consensus 239 p~NILl~~~~~~kL~DFG~a~~~~~ 263 (413)
T 3dzo_A 239 PVDIVLDQRGGVFLTGFEHLVRDGA 263 (413)
T ss_dssp GGGEEECTTCCEEECCGGGCEETTE
T ss_pred cceEEEecCCeEEEEeccceeecCC
Confidence 9999999999999999999886554
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.83 E-value=4.6e-20 Score=180.73 Aligned_cols=173 Identities=28% Similarity=0.293 Sum_probs=148.4
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
..++.|+|++|.+++..+..|..+++|++|+|++|.+++..+. ..+++|++|+|++|+++ .+|..+..+++|++|+|
T Consensus 31 ~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l 107 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107 (290)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEEC
Confidence 5789999999999998889999999999999999999965443 78999999999999998 78999999999999999
Q ss_pred ccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc-----cCCCCCCEEeccCCccc
Q 009965 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFV 224 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~l~~L~~L~ls~N~l~ 224 (521)
++|++++..|..|.++++|++|+|++|++++ +|...+.. ..++..+++++|+++.+ ..+++|+.|+|++|+++
T Consensus 108 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~-l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~ 185 (290)
T 1p9a_G 108 SFNRLTSLPLGALRGLGELQELYLKGNELKT-LPPGLLTP-TPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY 185 (290)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCCC-CCTTTTTT-CTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCcCcccCHHHHcCCCCCCEEECCCCCCCc-cChhhccc-ccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC
Confidence 9999998777889999999999999999994 55433221 25788899999998864 45789999999999999
Q ss_pred cCCccccc---cCCCcccCCCcCCCCC
Q 009965 225 GSIPKCLE---YLPSTSFQGNCLQNKD 248 (521)
Q Consensus 225 g~ip~~l~---~l~~l~~~~N~l~~~~ 248 (521)
.+|..+. .++.+.+.+|++.+.|
T Consensus 186 -~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 186 -TIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp -CCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred -ccChhhcccccCCeEEeCCCCccCcC
Confidence 7776653 4677889999888765
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.83 E-value=4.9e-20 Score=192.12 Aligned_cols=186 Identities=19% Similarity=0.181 Sum_probs=138.5
Q ss_pred ccceeeCC---------CCCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcC
Q 009965 60 WTGIACSD---------ARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQL 130 (521)
Q Consensus 60 w~gv~C~~---------~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 130 (521)
|..+.|.. ...+++.|+|++|.+++..|..|..+++|++|+|++|++++..|..|.++++|++|+|++|++
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 135 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcC
Confidence 56677763 134789999999999999899999999999999999999999999999999999999999999
Q ss_pred CCCCCcccCCCccCceeecccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc---
Q 009965 131 TGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL--- 207 (521)
Q Consensus 131 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~--- 207 (521)
++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|+..+.+|...+.. ..++..+++++|.++++
T Consensus 136 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~-l~~L~~L~L~~n~l~~~~~~ 214 (452)
T 3zyi_A 136 TVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEG-LFNLKYLNLGMCNIKDMPNL 214 (452)
T ss_dssp SBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTT-CTTCCEEECTTSCCSSCCCC
T ss_pred CccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccC-CCCCCEEECCCCcccccccc
Confidence 97777779999999999999999997666678888888888888855444666543322 23555666666665543
Q ss_pred cCCCCCCEEeccCCccccCCccccc---cCCCcccCCCcCCC
Q 009965 208 CHLSQLKVADFSYNFFVGSIPKCLE---YLPSTSFQGNCLQN 246 (521)
Q Consensus 208 ~~l~~L~~L~ls~N~l~g~ip~~l~---~l~~l~~~~N~l~~ 246 (521)
..+++|+.|+|++|.+++..|..+. +|+.+++++|.+..
T Consensus 215 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 256 (452)
T 3zyi_A 215 TPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSL 256 (452)
T ss_dssp TTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCE
T ss_pred cccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCce
Confidence 2345566666666666555554432 23344455554443
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.5e-20 Score=185.59 Aligned_cols=190 Identities=18% Similarity=0.192 Sum_probs=150.9
Q ss_pred CCCccceeeCCC---------CCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccc--cCCccccCCCCCcEEEc
Q 009965 57 PCHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIG--IIPKELGLLKRLKILDL 125 (521)
Q Consensus 57 ~c~w~gv~C~~~---------~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L 125 (521)
.|.|+++.|... ..+++.|+|++|.++...+..|..+++|++|+|++|.++. ..|..+..+++|++|+|
T Consensus 6 ~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 85 (306)
T 2z66_A 6 SCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL 85 (306)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEEC
T ss_pred eeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEEC
Confidence 378999999742 2479999999999997555568999999999999999983 34677778999999999
Q ss_pred cCCcCCCCCCcccCCCccCceeecccccCcccCc-hhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCc
Q 009965 126 GTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLP-AELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANL 204 (521)
Q Consensus 126 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l 204 (521)
++|.++ .+|..+..+++|++|+|++|++++..+ ..+..+++|++|++++|.+++..|..... ..++..+++++|.+
T Consensus 86 s~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--l~~L~~L~l~~n~l 162 (306)
T 2z66_A 86 SFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG--LSSLEVLKMAGNSF 162 (306)
T ss_dssp CSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTT--CTTCCEEECTTCEE
T ss_pred CCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhccc--CcCCCEEECCCCcc
Confidence 999998 577788899999999999999986554 57888999999999999998666653322 24677888888877
Q ss_pred Cc------ccCCCCCCEEeccCCccccCCccccc---cCCCcccCCCcCCCCCC
Q 009965 205 TG------LCHLSQLKVADFSYNFFVGSIPKCLE---YLPSTSFQGNCLQNKDP 249 (521)
Q Consensus 205 ~~------~~~l~~L~~L~ls~N~l~g~ip~~l~---~l~~l~~~~N~l~~~~~ 249 (521)
++ +..+++|+.|++++|++++..|..+. +|+.+++++|.+....+
T Consensus 163 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 216 (306)
T 2z66_A 163 QENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDT 216 (306)
T ss_dssp GGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCS
T ss_pred ccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccCh
Confidence 54 45678899999999998877776654 56677888888776543
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.82 E-value=7.4e-20 Score=171.73 Aligned_cols=150 Identities=19% Similarity=0.198 Sum_probs=112.3
Q ss_pred CCccceeeCCC---------CCCEEEEEecCCCCCccCC-ccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccC
Q 009965 58 CHWTGIACSDA---------RDRVLKINISGSSLKGFLA-PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGT 127 (521)
Q Consensus 58 c~w~gv~C~~~---------~~~l~~L~L~~n~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 127 (521)
|.|..+.|... ...++.|+|++|.|++..+ ..|..+++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 11 CEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 56777777531 2346678888888877654 3467788888888888888877777788888888888888
Q ss_pred CcCCCCCCcccCCCccCceeecccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc
Q 009965 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL 207 (521)
Q Consensus 128 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~ 207 (521)
|++++..|..|.++++|++|+|++|++++..|..|..+++|++|+|++|++++..|. .+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~---------------------~~ 149 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPG---------------------AF 149 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTT---------------------TT
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHH---------------------Hh
Confidence 888777777778888888888888888877777788888888888888888755453 23
Q ss_pred cCCCCCCEEeccCCccccCCc
Q 009965 208 CHLSQLKVADFSYNFFVGSIP 228 (521)
Q Consensus 208 ~~l~~L~~L~ls~N~l~g~ip 228 (521)
..+++|+.|++++|.+++..+
T Consensus 150 ~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 150 DTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp TTCTTCCEEECCSCCEECSGG
T ss_pred cCCCCCCEEEecCcCCcCCCc
Confidence 457789999999999986654
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=5.2e-20 Score=178.88 Aligned_cols=177 Identities=20% Similarity=0.197 Sum_probs=104.4
Q ss_pred CEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecc
Q 009965 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
+++.|+|++|.+++..+..|..+++|++|+|++|.+++..|..|..+++|++|++++|++++..+..+..+++|++|+|+
T Consensus 53 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 132 (276)
T 2z62_A 53 ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVA 132 (276)
T ss_dssp TCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECC
T ss_pred CCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECc
Confidence 45566666666655555556666666666666666665555556666666666666666665544456666666666666
Q ss_pred cccCcc-cCchhhhCCCCCCEEeCCCCCCCccCCCCCCCccccccc----ccccccCCcCccc----CCCCCCEEeccCC
Q 009965 151 SNGLTG-RLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIH----GMYASSANLTGLC----HLSQLKVADFSYN 221 (521)
Q Consensus 151 ~N~l~g-~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~----~l~l~~n~l~~~~----~l~~L~~L~ls~N 221 (521)
+|++++ .+|..|.++++|++|+|++|++++..+..... ...+. .+++++|.++++. ...+|+.|++++|
T Consensus 133 ~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~--l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n 210 (276)
T 2z62_A 133 HNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRV--LHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTN 210 (276)
T ss_dssp SSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHH--HHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSS
T ss_pred CCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhh--hhhccccceeeecCCCcccccCccccCCCcccEEECCCC
Confidence 666654 24666666666666666666666433221110 01122 4566677665432 2346888888888
Q ss_pred ccccCCcccc---ccCCCcccCCCcCCCCCC
Q 009965 222 FFVGSIPKCL---EYLPSTSFQGNCLQNKDP 249 (521)
Q Consensus 222 ~l~g~ip~~l---~~l~~l~~~~N~l~~~~~ 249 (521)
++++..+..+ .+|+.+++++|++.+.|+
T Consensus 211 ~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 211 QLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred ceeecCHhHhcccccccEEEccCCcccccCC
Confidence 8875544433 455667788888777664
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1e-19 Score=170.85 Aligned_cols=147 Identities=19% Similarity=0.247 Sum_probs=124.5
Q ss_pred CCccceeeCCC---------CCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCC
Q 009965 58 CHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTN 128 (521)
Q Consensus 58 c~w~gv~C~~~---------~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 128 (521)
|.|..+.|... ..+++.|+|++|.|++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 11 C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 11 CSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp EETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred ECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 67888888631 246899999999999877778999999999999999999888999999999999999999
Q ss_pred cCCCCCCcccCCCccCceeecccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCccc
Q 009965 129 QLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLC 208 (521)
Q Consensus 129 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~ 208 (521)
+|+...+..|.++++|++|+|++|++++..|..|..+++|++|+|++|++++..+. .+.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~---------------------~~~ 149 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKG---------------------TFS 149 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT---------------------TTT
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHH---------------------HHh
Confidence 99966666678899999999999999988888999999999999999999844332 234
Q ss_pred CCCCCCEEeccCCcccc
Q 009965 209 HLSQLKVADFSYNFFVG 225 (521)
Q Consensus 209 ~l~~L~~L~ls~N~l~g 225 (521)
.+++|+.|++++|.+..
T Consensus 150 ~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 150 PLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp TCTTCCEEECCSSCEEC
T ss_pred CCCCCCEEEeCCCCcCC
Confidence 57789999999999874
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=4.3e-20 Score=179.51 Aligned_cols=177 Identities=20% Similarity=0.179 Sum_probs=148.0
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
..++.|+|++|.+++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..|..|.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 46999999999999988779999999999999999999888889999999999999999999888899999999999999
Q ss_pred ccccCcccCchhhhCCCCCCEEeCCCCCCCcc-CCCCCCCcccccccccccccCCcCccc-----CCCCCC----EEecc
Q 009965 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGA-VPAGSNSGYTANIHGMYASSANLTGLC-----HLSQLK----VADFS 219 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~-~p~~~~~~~~~~l~~l~l~~n~l~~~~-----~l~~L~----~L~ls 219 (521)
++|++++..+..++.+++|++|+|++|.+++. +|..... ..++..+++++|.++++. .+.+|+ .|+++
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~--l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls 185 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSN--LTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLS 185 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGG--CTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECC
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhcc--CCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecC
Confidence 99999977777899999999999999999853 4543222 257788889998887532 234444 89999
Q ss_pred CCccccCCccccc--cCCCcccCCCcCCCCC
Q 009965 220 YNFFVGSIPKCLE--YLPSTSFQGNCLQNKD 248 (521)
Q Consensus 220 ~N~l~g~ip~~l~--~l~~l~~~~N~l~~~~ 248 (521)
+|.+++..+..+. +|+.+++++|.++...
T Consensus 186 ~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~ 216 (276)
T 2z62_A 186 LNPMNFIQPGAFKEIRLKELALDTNQLKSVP 216 (276)
T ss_dssp SSCCCEECTTSSCSCCEEEEECCSSCCSCCC
T ss_pred CCcccccCccccCCCcccEEECCCCceeecC
Confidence 9999866555443 5778889999877643
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.82 E-value=3.5e-20 Score=187.47 Aligned_cols=174 Identities=22% Similarity=0.200 Sum_probs=122.3
Q ss_pred CCccceeeCC---------CCCCEEEEEecCCCCCccCCcccc-CCCCCCEEECcCCcccccCCccccCCCCCcEEEccC
Q 009965 58 CHWTGIACSD---------ARDRVLKINISGSSLKGFLAPELG-LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGT 127 (521)
Q Consensus 58 c~w~gv~C~~---------~~~~l~~L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 127 (521)
|.+..+.|.. ....++.|+|++|.|++..+..+. .+++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 5566666653 123466777777777776666666 777777777777777776667777777777777777
Q ss_pred CcCCCCCCcccCCCccCceeecccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc
Q 009965 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL 207 (521)
Q Consensus 128 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~ 207 (521)
|+|++..+..|.++++|++|+|++|++++..|..|..+++|+.|+|++|+|+ .+|...+ .++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~-----------------~~~ 159 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS-RFPVELI-----------------KDG 159 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-SCCGGGT-----------------C--
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC-eeCHHHh-----------------cCc
Confidence 7777666666777777777777777777666777777777777777777777 3443211 112
Q ss_pred cCCCCCCEEeccCCccccCCccccccC-----CCcccCCCcCCCCCC
Q 009965 208 CHLSQLKVADFSYNFFVGSIPKCLEYL-----PSTSFQGNCLQNKDP 249 (521)
Q Consensus 208 ~~l~~L~~L~ls~N~l~g~ip~~l~~l-----~~l~~~~N~l~~~~~ 249 (521)
..+++|+.|||++|+|++..+..+..+ ..+++.+|++.+.|.
T Consensus 160 ~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 160 NKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp --CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred ccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCcC
Confidence 457889999999999996555566555 558999999988764
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.82 E-value=3.9e-20 Score=182.58 Aligned_cols=175 Identities=21% Similarity=0.224 Sum_probs=102.2
Q ss_pred CEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCC-ccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIP-KELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
+++.|+|++|.+++ +|..+..+++|++|+|++|++++..+ ..+..+++|++|++++|.+++..|..+..+++|++|+|
T Consensus 79 ~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 157 (306)
T 2z66_A 79 SLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKM 157 (306)
T ss_dssp CCCEEECCSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEEC
T ss_pred ccCEEECCCCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEEC
Confidence 45555555555553 44456666666666666666664433 45666666666666666666556666666666666666
Q ss_pred ccccCcc-cCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc-----cCCCCCCEEeccCCcc
Q 009965 150 QSNGLTG-RLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFF 223 (521)
Q Consensus 150 s~N~l~g-~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~l~~L~~L~ls~N~l 223 (521)
++|.+++ .+|..+..+++|++|+|++|++++..|..... ..++..+++++|.++++ ..+++|+.|++++|++
T Consensus 158 ~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 235 (306)
T 2z66_A 158 AGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNS--LSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHI 235 (306)
T ss_dssp TTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTT--CTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCC
T ss_pred CCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcC--CCCCCEEECCCCccCccChhhccCcccCCEeECCCCCC
Confidence 6666664 45666666666666666666666544433221 23555666666665542 3356666666666666
Q ss_pred ccCCccccc----cCCCcccCCCcCCCCC
Q 009965 224 VGSIPKCLE----YLPSTSFQGNCLQNKD 248 (521)
Q Consensus 224 ~g~ip~~l~----~l~~l~~~~N~l~~~~ 248 (521)
++..|..+. ++..+++++|++.+.|
T Consensus 236 ~~~~~~~~~~~~~~L~~L~L~~N~~~~~c 264 (306)
T 2z66_A 236 MTSKKQELQHFPSSLAFLNLTQNDFACTC 264 (306)
T ss_dssp CBCSSSSCCCCCTTCCEEECTTCCEECSG
T ss_pred cccCHHHHHhhhccCCEEEccCCCeeccc
Confidence 666655443 3445666666665543
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.3e-20 Score=194.53 Aligned_cols=150 Identities=22% Similarity=0.223 Sum_probs=120.2
Q ss_pred CCCCccc--eeeCCC--------CCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccC-CccccCCCCCcEEE
Q 009965 56 DPCHWTG--IACSDA--------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGII-PKELGLLKRLKILD 124 (521)
Q Consensus 56 ~~c~w~g--v~C~~~--------~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~ 124 (521)
..|.|.+ +.|... ..++++|+|++|.+++..|..|..+++|++|+|++|.+.+.+ |..|..+++|++|+
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 3566655 777632 257899999999999988889999999999999999997555 56789999999999
Q ss_pred ccCCcCCCCCCcccCCCccCceeecccccCcccCchh--hhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccC
Q 009965 125 LGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAE--LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSA 202 (521)
Q Consensus 125 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~--~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n 202 (521)
|++|++++..|..|+++++|++|+|++|++++.+|.. |..+++|++|+|++|++++..|...... ..++..+++++|
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~-l~~L~~L~L~~n 164 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLN-MRRFHVLDLTFN 164 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGG-CTTCCEEECTTC
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCC-CCcccEEeCCCC
Confidence 9999999888999999999999999999998766665 8889999999999999987666532221 245667777777
Q ss_pred CcCc
Q 009965 203 NLTG 206 (521)
Q Consensus 203 ~l~~ 206 (521)
.+++
T Consensus 165 ~l~~ 168 (455)
T 3v47_A 165 KVKS 168 (455)
T ss_dssp CBSC
T ss_pred cccc
Confidence 6654
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-19 Score=187.85 Aligned_cols=186 Identities=19% Similarity=0.200 Sum_probs=136.1
Q ss_pred ccceeeCC---------CCCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcC
Q 009965 60 WTGIACSD---------ARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQL 130 (521)
Q Consensus 60 w~gv~C~~---------~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 130 (521)
|..|.|.. ....++.|+|++|.+++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|++
T Consensus 45 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp SCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 56777863 134688999999999998889999999999999999999988889999999999999999999
Q ss_pred CCCCCcccCCCccCceeecccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc---
Q 009965 131 TGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL--- 207 (521)
Q Consensus 131 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~--- 207 (521)
++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|+..+.+|...+.. ..++..+++++|.++.+
T Consensus 125 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~-l~~L~~L~L~~n~l~~~~~~ 203 (440)
T 3zyj_A 125 TTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEG-LSNLRYLNLAMCNLREIPNL 203 (440)
T ss_dssp SSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTT-CSSCCEEECTTSCCSSCCCC
T ss_pred CeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhc-ccccCeecCCCCcCcccccc
Confidence 97767789999999999999999997767778888888888888865544666543322 13455566666655543
Q ss_pred cCCCCCCEEeccCCccccCCccccc---cCCCcccCCCcCCC
Q 009965 208 CHLSQLKVADFSYNFFVGSIPKCLE---YLPSTSFQGNCLQN 246 (521)
Q Consensus 208 ~~l~~L~~L~ls~N~l~g~ip~~l~---~l~~l~~~~N~l~~ 246 (521)
..+++|+.|+|++|++++..|..+. +|+.|++++|.++.
T Consensus 204 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 245 (440)
T 3zyj_A 204 TPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQV 245 (440)
T ss_dssp TTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCE
T ss_pred CCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeE
Confidence 2345556666666655554444332 23334444554443
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.81 E-value=7.6e-20 Score=177.45 Aligned_cols=172 Identities=25% Similarity=0.199 Sum_probs=145.7
Q ss_pred CCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceee
Q 009965 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
..+++.|+|++|.+++. +.+..+++|++|+|++|.+++..|..|..+++|++|+|++|++++..|..|..+++|++|+
T Consensus 62 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp CTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 35799999999999983 4799999999999999999988888899999999999999999988888899999999999
Q ss_pred cccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc-----cCCCCCCEEeccCCcc
Q 009965 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFF 223 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~l~~L~~L~ls~N~l 223 (521)
|++|++++..|..|+.+++|++|+|++|++++..|..... ..++..+++++|.++++ ..+++|+.|++++|.+
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 217 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDK--LTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPW 217 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT--CTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcC--CccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCc
Confidence 9999999877778899999999999999999554432221 25788899999998764 4578999999999999
Q ss_pred ccCCccccccCCCcccCCCcCCCCC
Q 009965 224 VGSIPKCLEYLPSTSFQGNCLQNKD 248 (521)
Q Consensus 224 ~g~ip~~l~~l~~l~~~~N~l~~~~ 248 (521)
.+..| .+..+++..|.+.+..
T Consensus 218 ~~~~~----~l~~l~~~~n~~~g~i 238 (272)
T 3rfs_A 218 DCTCP----GIRYLSEWINKHSGVV 238 (272)
T ss_dssp CCCTT----TTHHHHHHHHHTGGGB
T ss_pred cccCc----HHHHHHHHHHhCCCcc
Confidence 97766 4556667777766643
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.4e-20 Score=186.43 Aligned_cols=175 Identities=19% Similarity=0.210 Sum_probs=113.4
Q ss_pred CCEEEEEecCCCCCccCCccc--cCCCCCCEEECcCCcccccCCccccCC-----CCCcEEEccCCcCCCCCCcccCCCc
Q 009965 70 DRVLKINISGSSLKGFLAPEL--GLLTYLQELILHGNNLIGIIPKELGLL-----KRLKILDLGTNQLTGPIPPEIGNLT 142 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l--~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~g~~p~~~~~l~ 142 (521)
.+++.|+|++|.+++.+|..+ ..+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..|..|+.++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 356777777777777777665 6777777777777777765 6666665 7777777777777766667777777
Q ss_pred cCceeecccccCccc--Cchhh--hCCCCCCEEeCCCCCCCc--cCCCCCCCcccccccccccccCCcCccc------CC
Q 009965 143 GLVKINLQSNGLTGR--LPAEL--GNLISLEELHLDRNRLQG--AVPAGSNSGYTANIHGMYASSANLTGLC------HL 210 (521)
Q Consensus 143 ~L~~L~Ls~N~l~g~--~p~~~--~~l~~L~~L~Ls~N~l~g--~~p~~~~~~~~~~l~~l~l~~n~l~~~~------~l 210 (521)
+|++|+|++|++++. +|..+ ..+++|++|+|++|++++ .++..... ...++..+++++|.+++.. .+
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~~l 252 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAA-ARVQLQGLDLSHNSLRDAAGAPSCDWP 252 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHH-TTCCCSEEECTTSCCCSSCCCSCCCCC
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHh-cCCCCCEEECCCCcCCcccchhhhhhc
Confidence 777777777776654 33444 667777777777777762 11111000 0135666777777766522 24
Q ss_pred CCCCEEeccCCccccCCcccc-ccCCCcccCCCcCCCC
Q 009965 211 SQLKVADFSYNFFVGSIPKCL-EYLPSTSFQGNCLQNK 247 (521)
Q Consensus 211 ~~L~~L~ls~N~l~g~ip~~l-~~l~~l~~~~N~l~~~ 247 (521)
++|+.|++++|+++ .+|..+ .+|+.+++++|++++.
T Consensus 253 ~~L~~L~Ls~N~l~-~ip~~~~~~L~~L~Ls~N~l~~~ 289 (312)
T 1wwl_A 253 SQLNSLNLSFTGLK-QVPKGLPAKLSVLDLSYNRLDRN 289 (312)
T ss_dssp TTCCEEECTTSCCS-SCCSSCCSEEEEEECCSSCCCSC
T ss_pred CCCCEEECCCCccC-hhhhhccCCceEEECCCCCCCCC
Confidence 67777777777777 666555 3666677777766654
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.81 E-value=5.2e-19 Score=176.63 Aligned_cols=185 Identities=20% Similarity=0.301 Sum_probs=149.0
Q ss_pred CCccceeeCCC---------CCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCC
Q 009965 58 CHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTN 128 (521)
Q Consensus 58 c~w~gv~C~~~---------~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 128 (521)
|.|+.+.|... ..+++.|+|++|.+++..|..|..+++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 68999999731 247899999999999988889999999999999999999988999999999999999999
Q ss_pred cCCCCCCcccCCCccCceeecccccCcccCchhhhCCCCCCEEeCCCCCCCc--cCCCCCCCcccccccccccccCCcCc
Q 009965 129 QLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG--AVPAGSNSGYTANIHGMYASSANLTG 206 (521)
Q Consensus 129 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~~~~~~l~~l~l~~n~l~~ 206 (521)
+++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|.++. ..|..... . ++..++++.|.+++
T Consensus 113 ~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~-l--~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 113 HLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDG-L--KLNYLRISEAKLTG 186 (332)
T ss_dssp CCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCS-C--CCSCCBCCSSBCSS
T ss_pred cCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccC-C--ccCEEECcCCCCCc
Confidence 998 6777765 899999999999997777789999999999999999963 33433222 2 67777788877776
Q ss_pred ccC--CCCCCEEeccCCccccCCcccc---ccCCCcccCCCcCCCCC
Q 009965 207 LCH--LSQLKVADFSYNFFVGSIPKCL---EYLPSTSFQGNCLQNKD 248 (521)
Q Consensus 207 ~~~--l~~L~~L~ls~N~l~g~ip~~l---~~l~~l~~~~N~l~~~~ 248 (521)
+.. .++|+.|++++|.+++..|..+ .+|+.+++++|.+....
T Consensus 187 l~~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 233 (332)
T 2ft3_A 187 IPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIE 233 (332)
T ss_dssp CCSSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCC
T ss_pred cCccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCC
Confidence 532 3577778888888776665554 44566777777776643
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.81 E-value=4.5e-19 Score=171.98 Aligned_cols=175 Identities=25% Similarity=0.214 Sum_probs=149.3
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|++++|.++.. +.+..+++|++|+|++|.+++ + ..+..+++|++|+|++|.+++..|..|.++++|++|+|
T Consensus 41 ~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 116 (272)
T 3rfs_A 41 NSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVL 116 (272)
T ss_dssp TTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEEC
Confidence 4789999999999863 458999999999999999996 3 47999999999999999999888888999999999999
Q ss_pred ccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc-----cCCCCCCEEeccCCccc
Q 009965 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFV 224 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~l~~L~~L~ls~N~l~ 224 (521)
++|++++..|..|+.+++|++|+|++|++++..|..... ..++..+++++|.++++ ..+++|+.|++++|+++
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~--l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 194 (272)
T 3rfs_A 117 VENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDK--LTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLK 194 (272)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT--CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhcc--CccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCC
Confidence 999999888888999999999999999999544432221 35788999999998764 45789999999999999
Q ss_pred cCCcccc---ccCCCcccCCCcCCCCCCc
Q 009965 225 GSIPKCL---EYLPSTSFQGNCLQNKDPK 250 (521)
Q Consensus 225 g~ip~~l---~~l~~l~~~~N~l~~~~~~ 250 (521)
+..|..+ .+|+.+++++|++.+.++.
T Consensus 195 ~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 223 (272)
T 3rfs_A 195 SVPDGVFDRLTSLQYIWLHDNPWDCTCPG 223 (272)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred ccCHHHHhCCcCCCEEEccCCCccccCcH
Confidence 8777554 5667789999998887653
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.5e-19 Score=195.01 Aligned_cols=108 Identities=20% Similarity=0.213 Sum_probs=55.0
Q ss_pred EEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeeccc
Q 009965 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151 (521)
Q Consensus 72 l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 151 (521)
++.|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..+..|+++++|++|+|++
T Consensus 77 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~ 156 (597)
T 3oja_B 77 VELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSN 156 (597)
T ss_dssp CSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeC
Confidence 44455555555554444555555555555555555544444455555555555555555533333345555555555555
Q ss_pred ccCcccCchhhhCCCCCCEEeCCCCCCC
Q 009965 152 NGLTGRLPAELGNLISLEELHLDRNRLQ 179 (521)
Q Consensus 152 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 179 (521)
|.+++..|..|+++++|++|+|++|.++
T Consensus 157 N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 184 (597)
T 3oja_B 157 NNLERIEDDTFQATTSLQNLQLSSNRLT 184 (597)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECTTSCCS
T ss_pred CcCCCCChhhhhcCCcCcEEECcCCCCC
Confidence 5555444445555555555555555554
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.3e-19 Score=172.31 Aligned_cols=177 Identities=12% Similarity=0.142 Sum_probs=145.6
Q ss_pred CCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCc-ccccCCccccCCCCCcEEEccC-CcCCCCCCcccCCCccCce
Q 009965 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNN-LIGIIPKELGLLKRLKILDLGT-NQLTGPIPPEIGNLTGLVK 146 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~ 146 (521)
...++.|+|++|.+++..+..|..+++|++|+|++|+ +++..+..|..+++|++|+|++ |++++..+..|.++++|++
T Consensus 30 ~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~ 109 (239)
T 2xwt_C 30 PPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKF 109 (239)
T ss_dssp CTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCE
T ss_pred CCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCE
Confidence 3479999999999999877789999999999999997 8877777899999999999998 9999777788999999999
Q ss_pred eecccccCcccCchhhhCCCCCC---EEeCCCC-CCCccCCCCCCCccccccc-ccccccCCcCccc----CCCCCCEEe
Q 009965 147 INLQSNGLTGRLPAELGNLISLE---ELHLDRN-RLQGAVPAGSNSGYTANIH-GMYASSANLTGLC----HLSQLKVAD 217 (521)
Q Consensus 147 L~Ls~N~l~g~~p~~~~~l~~L~---~L~Ls~N-~l~g~~p~~~~~~~~~~l~-~l~l~~n~l~~~~----~l~~L~~L~ 217 (521)
|+|++|++++ +|. |..+++|+ +|++++| +++ .+|...+.. ...+. .+++++|.++.+. ..++|+.|+
T Consensus 110 L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~-~i~~~~~~~-l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~ 185 (239)
T 2xwt_C 110 LGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMT-SIPVNAFQG-LCNETLTLKLYNNGFTSVQGYAFNGTKLDAVY 185 (239)
T ss_dssp EEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCC-EECTTTTTT-TBSSEEEEECCSCCCCEECTTTTTTCEEEEEE
T ss_pred EeCCCCCCcc-ccc-cccccccccccEEECCCCcchh-hcCcccccc-hhcceeEEEcCCCCCcccCHhhcCCCCCCEEE
Confidence 9999999995 776 88999998 9999999 888 445433221 24677 8899999887543 236899999
Q ss_pred ccCCc-cccCCcccc----ccCCCcccCCCcCCCCCC
Q 009965 218 FSYNF-FVGSIPKCL----EYLPSTSFQGNCLQNKDP 249 (521)
Q Consensus 218 ls~N~-l~g~ip~~l----~~l~~l~~~~N~l~~~~~ 249 (521)
+++|+ +++..+..+ .+|+.+++++|.++...+
T Consensus 186 L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~ 222 (239)
T 2xwt_C 186 LNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPS 222 (239)
T ss_dssp CTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCC
T ss_pred cCCCCCcccCCHHHhhccccCCcEEECCCCccccCCh
Confidence 99995 885555544 567778999998887543
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=5.4e-20 Score=196.45 Aligned_cols=188 Identities=18% Similarity=0.212 Sum_probs=153.0
Q ss_pred CCCccceeeCCC-----------CCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEc
Q 009965 57 PCHWTGIACSDA-----------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDL 125 (521)
Q Consensus 57 ~c~w~gv~C~~~-----------~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 125 (521)
.|.|.|+ |+.. ..+++.|+|++|.+++..|..|..+++|++|+|++|++++..|..|..+++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 5888887 7521 247999999999999988999999999999999999999998999999999999999
Q ss_pred cCCcCCCCCCcccCCCccCceeecccccCcc-cCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCc
Q 009965 126 GTNQLTGPIPPEIGNLTGLVKINLQSNGLTG-RLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANL 204 (521)
Q Consensus 126 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l 204 (521)
++|++++..|..|+++++|++|+|++|.+++ .+|..++++++|++|++++|.+.+.+|...... ..++..+++++|.+
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~-l~~L~~L~L~~n~l 160 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAG-LTSLNELEIKALSL 160 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTT-CCEEEEEEEEETTC
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhc-ccccCeeeccCCcc
Confidence 9999998888889999999999999999996 467889999999999999999666777543332 35778888888887
Q ss_pred Cc-----ccCCCCCCEEeccCCccccCCccc----cccCCCcccCCCcCCCC
Q 009965 205 TG-----LCHLSQLKVADFSYNFFVGSIPKC----LEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 205 ~~-----~~~l~~L~~L~ls~N~l~g~ip~~----l~~l~~l~~~~N~l~~~ 247 (521)
++ +..+++|+.|++++|.+. .+|.. +.+++.+++++|.+.+.
T Consensus 161 ~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~ 211 (549)
T 2z81_A 161 RNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARF 211 (549)
T ss_dssp CEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTC
T ss_pred cccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccc
Confidence 65 445667777777777765 34432 45666677777766653
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.80 E-value=6.2e-20 Score=185.00 Aligned_cols=189 Identities=17% Similarity=0.231 Sum_probs=153.2
Q ss_pred CCCCCccceeeCC-----------CCCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEE
Q 009965 55 ADPCHWTGIACSD-----------ARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKIL 123 (521)
Q Consensus 55 ~~~c~w~gv~C~~-----------~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 123 (521)
..+|.|.|+ |+- ...+++.|+|++|.+++..+..+..+++|++|+|++|++++..|..|.++++|++|
T Consensus 27 ~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 27 SLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 457888887 642 12479999999999999777789999999999999999999888999999999999
Q ss_pred EccCCcCCCCCCcccCCCccCceeecccccCcccCch--hhhCCCCCCEEeCCCCC-CCccCCCCCCCcccccccccccc
Q 009965 124 DLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPA--ELGNLISLEELHLDRNR-LQGAVPAGSNSGYTANIHGMYAS 200 (521)
Q Consensus 124 ~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~~~~~~l~~l~l~ 200 (521)
+|++|++++..+..|.++++|++|+|++|+++ .+|. .|.++++|++|++++|+ ++ .++...... ..++..++++
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~-~~~~~~~~~-l~~L~~L~l~ 182 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFT-KIQRKDFAG-LTFLEELEID 182 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCC-EECTTTTTT-CCEEEEEEEE
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCcccc-ccCHHHccC-CCCCCEEECC
Confidence 99999999655555999999999999999999 4554 78999999999999995 55 444322221 2577888999
Q ss_pred cCCcCc-----ccCCCCCCEEeccCCccccCCccc----cccCCCcccCCCcCCCCC
Q 009965 201 SANLTG-----LCHLSQLKVADFSYNFFVGSIPKC----LEYLPSTSFQGNCLQNKD 248 (521)
Q Consensus 201 ~n~l~~-----~~~l~~L~~L~ls~N~l~g~ip~~----l~~l~~l~~~~N~l~~~~ 248 (521)
+|.+++ +..+++|++|++++|.++ .+|.. +.+++.+++++|.+....
T Consensus 183 ~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~ 238 (353)
T 2z80_A 183 ASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTFH 238 (353)
T ss_dssp ETTCCEECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEEESCBCTTCC
T ss_pred CCCcCccCHHHHhccccCCeecCCCCccc-cchhhhhhhcccccEEECCCCcccccc
Confidence 988765 456788999999999986 55543 467788899999887743
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=99.80 E-value=4.3e-20 Score=200.68 Aligned_cols=176 Identities=17% Similarity=0.291 Sum_probs=154.7
Q ss_pred CCCEEEEEecCCCCCcc-----------------CCcccc--CCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCc
Q 009965 69 RDRVLKINISGSSLKGF-----------------LAPELG--LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQ 129 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~-----------------~p~~l~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 129 (521)
-.+++.|+|++|.++|. +|+.++ ++++|++|+|++|++.+.+|..|+++++|++|+|++|+
T Consensus 205 l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 205 LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCT
T ss_pred ccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCC
Confidence 35899999999999996 999999 99999999999999999999999999999999999999
Q ss_pred -CCC-CCCcccCCC------ccCceeecccccCcccCch--hhhCCCCCCEEeCCCCCCCccCCCCCCCccccccccccc
Q 009965 130 -LTG-PIPPEIGNL------TGLVKINLQSNGLTGRLPA--ELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYA 199 (521)
Q Consensus 130 -l~g-~~p~~~~~l------~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l 199 (521)
++| .+|..++.+ ++|++|+|++|+++ .+|. .|+++++|++|+|++|+++|.+| ... ...++..+++
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~--~l~~L~~L~L 360 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFG--SEIKLASLNL 360 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCE--EEEEESEEEC
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhC--CCCCCCEEEC
Confidence 998 899999887 99999999999999 8998 99999999999999999999999 322 2357888899
Q ss_pred ccCCcCc----ccCCCC-CCEEeccCCccccCCccccc-----cCCCcccCCCcCCCCCC
Q 009965 200 SSANLTG----LCHLSQ-LKVADFSYNFFVGSIPKCLE-----YLPSTSFQGNCLQNKDP 249 (521)
Q Consensus 200 ~~n~l~~----~~~l~~-L~~L~ls~N~l~g~ip~~l~-----~l~~l~~~~N~l~~~~~ 249 (521)
++|.++. +..+++ |+.|++++|+++ .+|..+. +|+.+++++|.+.+..|
T Consensus 361 ~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p 419 (636)
T 4eco_A 361 AYNQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDG 419 (636)
T ss_dssp CSSEEEECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTT
T ss_pred CCCccccccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcch
Confidence 9988764 345777 999999999998 7887654 46678899998877544
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1e-19 Score=175.04 Aligned_cols=137 Identities=14% Similarity=0.181 Sum_probs=104.5
Q ss_pred chhCcCCCeeEEEEEe-CCCCE--EEEEEeeeecccc--------------------chhhHHHHHHHHHHHhccCCCCc
Q 009965 364 NIIGSSPDSLVYKGTM-KGGPE--IAVISLCIKEEHW--------------------TGYLELYFQREVADLARINHENT 420 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~-~~~~~--vavk~~~~~~~~~--------------------~~~~~~~~~~E~~~l~~l~H~ni 420 (521)
+.||+|+||.||+|.. .+|+. ||||.+....... .......+.+|+.++.+++|+++
T Consensus 53 ~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 132 (258)
T 1zth_A 53 GVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAGV 132 (258)
T ss_dssp EEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCCC
Confidence 6899999999999998 68888 9999864321110 01123468899999999988865
Q ss_pred --cceeeEEecCCCCceEEEEecCCC-C----ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCCCCeEecCCC
Q 009965 421 --GKLLGYCRESSPFTRMLVFDYASN-G----TLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH-TELGPPFTISELN 492 (521)
Q Consensus 421 --v~l~g~~~~~~~~~~~lv~ey~~~-g----sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~ivH~Dlk 492 (521)
..++++ . ..+|||||+.+ | +|.++... .++.....++.|++.||.||| +. +|+|||||
T Consensus 133 ~~p~~~~~----~--~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~---givHrDlk 198 (258)
T 1zth_A 133 SVPQPYTY----M--KNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEA---ELVHADLS 198 (258)
T ss_dssp CCCCEEEE----E--TTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTS---CEECSSCS
T ss_pred CCCeEEEc----C--CCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHC---CEEeCCCC
Confidence 333332 2 46899999952 4 66665421 234567889999999999999 87 99999999
Q ss_pred CCCeeecCCCCeeeCCCchhhhcc
Q 009965 493 SSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 493 ~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|+|||+++ .++|+|||+|....
T Consensus 199 p~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 199 EYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp TTSEEESS--SEEECCCTTCEETT
T ss_pred HHHEEEcC--cEEEEECcccccCC
Confidence 99999998 99999999998654
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.80 E-value=8.4e-20 Score=180.65 Aligned_cols=175 Identities=17% Similarity=0.167 Sum_probs=113.4
Q ss_pred CEEEEEecCCCCCccCCccc--cCCCCCCEEECcCCcccccCC----ccccCCCCCcEEEccCCcCCCCCCcccCCCccC
Q 009965 71 RVLKINISGSSLKGFLAPEL--GLLTYLQELILHGNNLIGIIP----KELGLLKRLKILDLGTNQLTGPIPPEIGNLTGL 144 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l--~~l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 144 (521)
+++.|+|++|.+++..|..+ ..+++|++|+|++|.+++..| ..+..+++|++|+|++|++++..|..|+.+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 47788888888887777777 777788888888887776554 334567777888888887777777777777777
Q ss_pred ceeecccccCccc--Cc--hhhhCCCCCCEEeCCCCCCCccCCCCCC--CcccccccccccccCCcCcc-----cCC---
Q 009965 145 VKINLQSNGLTGR--LP--AELGNLISLEELHLDRNRLQGAVPAGSN--SGYTANIHGMYASSANLTGL-----CHL--- 210 (521)
Q Consensus 145 ~~L~Ls~N~l~g~--~p--~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~~~~~l~~l~l~~n~l~~~-----~~l--- 210 (521)
++|+|++|++.+. ++ ..++.+++|++|+|++|+++ .+|.... ......+..+++++|.+++. ..+
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 250 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWS 250 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCC
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCc
Confidence 7777777776642 22 22356677777777777775 2221000 00113566667777766653 222
Q ss_pred CCCCEEeccCCccccCCcccc-ccCCCcccCCCcCCCC
Q 009965 211 SQLKVADFSYNFFVGSIPKCL-EYLPSTSFQGNCLQNK 247 (521)
Q Consensus 211 ~~L~~L~ls~N~l~g~ip~~l-~~l~~l~~~~N~l~~~ 247 (521)
++|++|++++|+++ .+|..+ .+|+.+++++|++++.
T Consensus 251 ~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N~l~~~ 287 (310)
T 4glp_A 251 SALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSNRLNRA 287 (310)
T ss_dssp TTCCCEECCSSCCC-SCCSCCCSCCSCEECCSCCCCSC
T ss_pred CcCCEEECCCCCCC-chhhhhcCCCCEEECCCCcCCCC
Confidence 46777777777777 555443 4666677777766653
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.80 E-value=5e-19 Score=166.08 Aligned_cols=153 Identities=20% Similarity=0.235 Sum_probs=132.5
Q ss_pred EEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCC-ccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeeccc
Q 009965 73 LKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIP-KELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151 (521)
Q Consensus 73 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 151 (521)
+.+++++|.++. +|..+. ..+++|+|++|+|++..| ..|..+++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 379999999987 676554 457899999999998765 4589999999999999999988888999999999999999
Q ss_pred ccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcccCCCCCCEEeccCCccccCCcccc
Q 009965 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCL 231 (521)
Q Consensus 152 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~ip~~l 231 (521)
|++++..|..|..+++|++|+|++|++++..|. .+..+++|+.|+|++|++++..|..+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~---------------------~~~~l~~L~~L~L~~N~l~~~~~~~~ 149 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGND---------------------SFIGLSSVRLLSLYDNQITTVAPGAF 149 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTT---------------------SSTTCTTCSEEECTTSCCCCBCTTTT
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHh---------------------HcCCCccCCEEECCCCcCCEECHHHh
Confidence 999988888899999999999999999966554 24457889999999999998888776
Q ss_pred c---cCCCcccCCCcCCCCCC
Q 009965 232 E---YLPSTSFQGNCLQNKDP 249 (521)
Q Consensus 232 ~---~l~~l~~~~N~l~~~~~ 249 (521)
. +|+.+++++|++.+.|+
T Consensus 150 ~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 150 DTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp TTCTTCCEEECCSCCEECSGG
T ss_pred cCCCCCCEEEecCcCCcCCCc
Confidence 5 56678899999988665
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=6.5e-19 Score=175.74 Aligned_cols=185 Identities=19% Similarity=0.249 Sum_probs=132.0
Q ss_pred CCCccceeeCC---------CCCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccC
Q 009965 57 PCHWTGIACSD---------ARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGT 127 (521)
Q Consensus 57 ~c~w~gv~C~~---------~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 127 (521)
.|.|+.+.|.. ....++.|+|++|.+++..+..|..+++|++|+|++|++++..|..|..+++|++|+|++
T Consensus 30 ~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 30 QCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp EEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred cCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 46899999873 134789999999999998887899999999999999999998899999999999999999
Q ss_pred CcCCCCCCcccCCCccCceeecccccCcccCchhhhCCCCCCEEeCCCCCCCc--cCCCCCCCcccccccccccccCCcC
Q 009965 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG--AVPAGSNSGYTANIHGMYASSANLT 205 (521)
Q Consensus 128 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~~~~~~l~~l~l~~n~l~ 205 (521)
|+++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|.++. ..+.... ...++..+++++|.++
T Consensus 110 n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~--~l~~L~~L~l~~n~l~ 184 (330)
T 1xku_A 110 NQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQ--GMKKLSYIRIADTNIT 184 (330)
T ss_dssp SCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGG--GCTTCCEEECCSSCCC
T ss_pred CcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhcc--CCCCcCEEECCCCccc
Confidence 9998 6776654 688888888888887777778888888888888887753 2222111 1234555555555555
Q ss_pred cccC--CCCCCEEeccCCccccCCccccc---cCCCcccCCCcCCC
Q 009965 206 GLCH--LSQLKVADFSYNFFVGSIPKCLE---YLPSTSFQGNCLQN 246 (521)
Q Consensus 206 ~~~~--l~~L~~L~ls~N~l~g~ip~~l~---~l~~l~~~~N~l~~ 246 (521)
.+.. .++|+.|++++|.+++..|..+. +|+.+++++|.+..
T Consensus 185 ~l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 230 (330)
T 1xku_A 185 TIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA 230 (330)
T ss_dssp SCCSSCCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCE
T ss_pred cCCccccccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCce
Confidence 4321 24555555555555554444432 33445555554444
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.80 E-value=5.4e-19 Score=165.84 Aligned_cols=153 Identities=20% Similarity=0.231 Sum_probs=131.9
Q ss_pred EEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecccc
Q 009965 73 LKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152 (521)
Q Consensus 73 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 152 (521)
..+++++++++. +|..+. ++|+.|+|++|+|++..|..|..+++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~~-iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLTE-IPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCSS-CCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcCc-CCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 368999999987 566554 78999999999999888889999999999999999999888999999999999999999
Q ss_pred cCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcccCCCCCCEEeccCCccccCCcccc-
Q 009965 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCL- 231 (521)
Q Consensus 153 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~ip~~l- 231 (521)
+|++..+..|..+++|++|+|++|++++..|. .+..+++|+.|+|++|++++..+..+
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~---------------------~~~~l~~L~~L~L~~N~l~~~~~~~~~ 149 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVD---------------------AFQDLHNLNLLSLYDNKLQTIAKGTFS 149 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT---------------------TTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHH---------------------HcCCCCCCCEEECCCCcCCEECHHHHh
Confidence 99966666689999999999999999965543 24457889999999999997776655
Q ss_pred --ccCCCcccCCCcCCCCCC
Q 009965 232 --EYLPSTSFQGNCLQNKDP 249 (521)
Q Consensus 232 --~~l~~l~~~~N~l~~~~~ 249 (521)
.+++.+++++|++.+.|.
T Consensus 150 ~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 150 PLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp TCTTCCEEECCSSCEECSGG
T ss_pred CCCCCCEEEeCCCCcCCCCc
Confidence 456778999998887654
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.9e-19 Score=195.15 Aligned_cols=111 Identities=21% Similarity=0.166 Sum_probs=98.4
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
..++.|||++|.|++..+.+|.++++|++|+|++|+|++..|.+|.+|++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 46889999999999877788999999999999999999888888999999999999999998776778899999999999
Q ss_pred ccccCcccCchhhhCCCCCCEEeCCCCCCCc
Q 009965 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQG 180 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 180 (521)
++|++++..+..|+++++|++|+|++|.+++
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~ 162 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQS 162 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCC
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCcccc
Confidence 9999997666778999999999999999874
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.79 E-value=5.1e-19 Score=185.63 Aligned_cols=181 Identities=18% Similarity=0.183 Sum_probs=147.1
Q ss_pred ccceeeCC---------CCCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcC
Q 009965 60 WTGIACSD---------ARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQL 130 (521)
Q Consensus 60 w~gv~C~~---------~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 130 (521)
|..|.|.. ...+++.|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|++
T Consensus 13 ~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l 92 (477)
T 2id5_A 13 DRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRL 92 (477)
T ss_dssp TTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcC
Confidence 56777753 134789999999999998889999999999999999999998899999999999999999999
Q ss_pred CCCCCcccCCCccCceeecccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc---
Q 009965 131 TGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL--- 207 (521)
Q Consensus 131 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~--- 207 (521)
++..+..|.++++|++|+|++|++++..|..|..+++|++|+|++|.+++..|..... ..++..+++++|.++++
T Consensus 93 ~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 93 KLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSG--LNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTT--CTTCCEEEEESCCCSSCCHH
T ss_pred CccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccC--CCCCCEEECCCCcCcccChh
Confidence 9766677899999999999999999988999999999999999999998665543322 24677788888877653
Q ss_pred --cCCCCCCEEeccCCccccCCccccc---cCCCcccCCC
Q 009965 208 --CHLSQLKVADFSYNFFVGSIPKCLE---YLPSTSFQGN 242 (521)
Q Consensus 208 --~~l~~L~~L~ls~N~l~g~ip~~l~---~l~~l~~~~N 242 (521)
..+++|+.|++++|.+.+..+..+. +|+.+++++|
T Consensus 171 ~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~ 210 (477)
T 2id5_A 171 ALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHW 210 (477)
T ss_dssp HHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECC
T ss_pred HhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCC
Confidence 4577788888888877765554443 3444555554
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.79 E-value=7.9e-20 Score=181.03 Aligned_cols=175 Identities=21% Similarity=0.252 Sum_probs=144.9
Q ss_pred CCCEEEEEecCCCCCccCCccccCC-----CCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCC--CCccc--C
Q 009965 69 RDRVLKINISGSSLKGFLAPELGLL-----TYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP--IPPEI--G 139 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~--~p~~~--~ 139 (521)
..+++.|+|++|.+++. |..++.+ ++|++|+|++|++++..|..|+.+++|++|+|++|++.+. +|..+ .
T Consensus 120 l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp SCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 45799999999999997 8888877 9999999999999998889999999999999999998865 34455 8
Q ss_pred CCccCceeecccccCcc--cCc-hhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcccC--CCCCC
Q 009965 140 NLTGLVKINLQSNGLTG--RLP-AELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCH--LSQLK 214 (521)
Q Consensus 140 ~l~~L~~L~Ls~N~l~g--~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~--l~~L~ 214 (521)
.+++|++|+|++|++++ .++ ..+.++++|++|+|++|++++.+|..... ...++..+++++|.++.+.. .++|+
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-~l~~L~~L~Ls~N~l~~ip~~~~~~L~ 277 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCD-WPSQLNSLNLSFTGLKQVPKGLPAKLS 277 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCC-CCTTCCEEECTTSCCSSCCSSCCSEEE
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhh-hcCCCCEEECCCCccChhhhhccCCce
Confidence 99999999999999993 233 34568899999999999999877543322 13578899999999987543 26899
Q ss_pred EEeccCCccccCCcc--ccccCCCcccCCCcCCC
Q 009965 215 VADFSYNFFVGSIPK--CLEYLPSTSFQGNCLQN 246 (521)
Q Consensus 215 ~L~ls~N~l~g~ip~--~l~~l~~l~~~~N~l~~ 246 (521)
.||+++|++++. |. .+.+|+.+++++|++++
T Consensus 278 ~L~Ls~N~l~~~-p~~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 278 VLDLSYNRLDRN-PSPDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp EEECCSSCCCSC-CCTTTSCEEEEEECTTCTTTC
T ss_pred EEECCCCCCCCC-hhHhhCCCCCEEeccCCCCCC
Confidence 999999999965 64 23556678999998876
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.79 E-value=9.5e-19 Score=182.39 Aligned_cols=180 Identities=15% Similarity=0.149 Sum_probs=121.2
Q ss_pred CCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceee
Q 009965 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
..+++.|+|++|.+++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+++...+..|.++++|++|+
T Consensus 98 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 177 (452)
T 3zyi_A 98 LHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLD 177 (452)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEe
Confidence 35789999999999998888999999999999999999987777799999999999999999866666777777777777
Q ss_pred cccc-cCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCC---------------------cccccccccccccCCcCc
Q 009965 149 LQSN-GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNS---------------------GYTANIHGMYASSANLTG 206 (521)
Q Consensus 149 Ls~N-~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~---------------------~~~~~l~~l~l~~n~l~~ 206 (521)
|++| .+....+..|.++++|++|+|++|++++ +|..... ....++..+++++|.+++
T Consensus 178 l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 256 (452)
T 3zyi_A 178 LGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSL 256 (452)
T ss_dssp CCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CCCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCE
T ss_pred CCCCCCccccChhhccCCCCCCEEECCCCcccc-cccccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCce
Confidence 7763 3333333356666666666666666663 3321100 001234445555555543
Q ss_pred -----ccCCCCCCEEeccCCccccCCcccc---ccCCCcccCCCcCCCCCC
Q 009965 207 -----LCHLSQLKVADFSYNFFVGSIPKCL---EYLPSTSFQGNCLQNKDP 249 (521)
Q Consensus 207 -----~~~l~~L~~L~ls~N~l~g~ip~~l---~~l~~l~~~~N~l~~~~~ 249 (521)
+..+++|+.|+|++|++++..+..+ .+|+.+++++|++.+.|.
T Consensus 257 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 257 IERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred ECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCC
Confidence 2345666666777666664444333 345556677776666654
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-18 Score=164.40 Aligned_cols=161 Identities=25% Similarity=0.267 Sum_probs=136.0
Q ss_pred CccceeeCCCCCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCccc
Q 009965 59 HWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI 138 (521)
Q Consensus 59 ~w~gv~C~~~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~ 138 (521)
.|..-.|. .+.++.++++++. +|..+. ++|++|+|++|++++..|..|..+++|++|+|++|+|+...+..|
T Consensus 13 ~~~~~~Cs-----~~~v~c~~~~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~ 84 (229)
T 3e6j_A 13 CPSQCSCS-----GTTVDCRSKRHAS-VPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVF 84 (229)
T ss_dssp CCTTCEEE-----TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred CCCCCEEe-----CCEeEccCCCcCc-cCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhc
Confidence 34455675 3469999999976 565554 899999999999999989999999999999999999986666778
Q ss_pred CCCccCceeecccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcccCCCCCCEEec
Q 009965 139 GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADF 218 (521)
Q Consensus 139 ~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~l 218 (521)
..+++|++|+|++|+|++..+..|..+++|++|+|++|+++ .+|.. +..+++|+.|+|
T Consensus 85 ~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~---------------------~~~l~~L~~L~L 142 (229)
T 3e6j_A 85 DSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRG---------------------IERLTHLTHLAL 142 (229)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTT---------------------GGGCTTCSEEEC
T ss_pred ccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcc---------------------cccCCCCCEEEC
Confidence 99999999999999999777777899999999999999998 66642 345788999999
Q ss_pred cCCccccCCcccc---ccCCCcccCCCcCCCCCC
Q 009965 219 SYNFFVGSIPKCL---EYLPSTSFQGNCLQNKDP 249 (521)
Q Consensus 219 s~N~l~g~ip~~l---~~l~~l~~~~N~l~~~~~ 249 (521)
++|+|++..+..+ .+|+.+++.+|++.+.|+
T Consensus 143 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 143 DQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 9999996655544 566778999999988764
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=5.8e-19 Score=183.95 Aligned_cols=176 Identities=21% Similarity=0.297 Sum_probs=105.5
Q ss_pred CCEEEEEecCCCCCccCCcc--ccCCCCCCEEECcCCcccccCCcc-ccCCCCCcEEEccCCcCCCCCCcccCCC-----
Q 009965 70 DRVLKINISGSSLKGFLAPE--LGLLTYLQELILHGNNLIGIIPKE-LGLLKRLKILDLGTNQLTGPIPPEIGNL----- 141 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~--l~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l----- 141 (521)
.+++.|+|++|.+++.++.. +..+++|++|+|++|++++..|.. +..+++|++|+|++|++++..|..+..+
T Consensus 103 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L 182 (455)
T 3v47_A 103 ANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHF 182 (455)
T ss_dssp TTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEE
T ss_pred ccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccc
Confidence 35666666666666644444 666666666666666666655554 5666666666666666665555433322
Q ss_pred --------------------------------------------------------------------------------
Q 009965 142 -------------------------------------------------------------------------------- 141 (521)
Q Consensus 142 -------------------------------------------------------------------------------- 141 (521)
T Consensus 183 ~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~ 262 (455)
T 3v47_A 183 TLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFK 262 (455)
T ss_dssp EEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSC
T ss_pred cccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhc
Confidence
Q ss_pred ------------ccCceeecccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCc---
Q 009965 142 ------------TGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG--- 206 (521)
Q Consensus 142 ------------~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~--- 206 (521)
++|++|+|++|++++.+|..|+.+++|++|+|++|++++..|..... ...+..+++++|.+++
T Consensus 263 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~--l~~L~~L~Ls~N~l~~~~~ 340 (455)
T 3v47_A 263 DPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWG--LTHLLKLNLSQNFLGSIDS 340 (455)
T ss_dssp CCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTT--CTTCCEEECCSSCCCEECG
T ss_pred cCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcC--cccCCEEECCCCccCCcCh
Confidence 24555555555555566777777777777777777777555543221 2355666666666654
Q ss_pred --ccCCCCCCEEeccCCccccCCcccc---ccCCCcccCCCcCCCC
Q 009965 207 --LCHLSQLKVADFSYNFFVGSIPKCL---EYLPSTSFQGNCLQNK 247 (521)
Q Consensus 207 --~~~l~~L~~L~ls~N~l~g~ip~~l---~~l~~l~~~~N~l~~~ 247 (521)
+..+++|+.|++++|++++..|..+ .+|+.+++++|+++..
T Consensus 341 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 386 (455)
T 3v47_A 341 RMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSV 386 (455)
T ss_dssp GGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCC
T ss_pred hHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccC
Confidence 2345666666666666665555444 3344556666666554
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.79 E-value=9.3e-19 Score=181.80 Aligned_cols=179 Identities=16% Similarity=0.129 Sum_probs=114.9
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|+|++|.+++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|+++...+..|.++++|++|+|
T Consensus 88 ~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l 167 (440)
T 3zyj_A 88 RHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDL 167 (440)
T ss_dssp SSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCC
Confidence 47888888888888877788888888888888888888766677888888888888888887665656666666666666
Q ss_pred cccc-CcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCC---------------------cccccccccccccCCcCc-
Q 009965 150 QSNG-LTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNS---------------------GYTANIHGMYASSANLTG- 206 (521)
Q Consensus 150 s~N~-l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~---------------------~~~~~l~~l~l~~n~l~~- 206 (521)
++|+ ++...+..|.++++|++|+|++|+++ .+|..... ....++..+++++|.++.
T Consensus 168 ~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 246 (440)
T 3zyj_A 168 GELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVI 246 (440)
T ss_dssp CCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCCCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEE
T ss_pred CCCCCcceeCcchhhcccccCeecCCCCcCc-cccccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEE
Confidence 6633 33222334566666666666666655 34421100 001244455555555543
Q ss_pred ----ccCCCCCCEEeccCCccccCCcccc---ccCCCcccCCCcCCCCCC
Q 009965 207 ----LCHLSQLKVADFSYNFFVGSIPKCL---EYLPSTSFQGNCLQNKDP 249 (521)
Q Consensus 207 ----~~~l~~L~~L~ls~N~l~g~ip~~l---~~l~~l~~~~N~l~~~~~ 249 (521)
+..+++|+.|+|++|++++..+..+ .+|+.+++++|++.+.|.
T Consensus 247 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 247 ERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp CTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred ChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCC
Confidence 2345666667777776664444333 345556677776666553
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=4.4e-19 Score=191.74 Aligned_cols=175 Identities=21% Similarity=0.169 Sum_probs=146.3
Q ss_pred CCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceee
Q 009965 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
..+++.|+|++|.+++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+
T Consensus 31 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 31 PSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred CCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEE
Confidence 35799999999999998888999999999999999999998899999999999999999999988899999999999999
Q ss_pred cccccCcccCchhhhCCCCCCEEeCCCCCCCc-cCCCCCCCcccccccccccccCCcCcccC-----CCC----CCEEec
Q 009965 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQG-AVPAGSNSGYTANIHGMYASSANLTGLCH-----LSQ----LKVADF 218 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~~~~~~l~~l~l~~n~l~~~~~-----l~~----L~~L~l 218 (521)
|++|++++..|..|+++++|++|+|++|.+++ .+|..... ..++..+++++|.++++.. +++ +..|++
T Consensus 111 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~--l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l 188 (606)
T 3vq2_A 111 AVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSN--LTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDM 188 (606)
T ss_dssp CTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGT--CTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEEC
T ss_pred ccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhh--cCCCCEEEccCCcceecChhhhhhhhccccccceeec
Confidence 99999998777889999999999999999985 56654322 3567788888888775432 222 457888
Q ss_pred cCCccccCCccccc--cCCCcccCCCcCC
Q 009965 219 SYNFFVGSIPKCLE--YLPSTSFQGNCLQ 245 (521)
Q Consensus 219 s~N~l~g~ip~~l~--~l~~l~~~~N~l~ 245 (521)
++|.+++..+..+. +++.+++++|.+.
T Consensus 189 ~~n~l~~~~~~~~~~~~L~~L~L~~n~~~ 217 (606)
T 3vq2_A 189 SLNPIDFIQDQAFQGIKLHELTLRGNFNS 217 (606)
T ss_dssp TTCCCCEECTTTTTTCEEEEEEEESCCSC
T ss_pred cCCCcceeCcccccCceeeeeeccCCccc
Confidence 88888865554443 5677888888654
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.9e-18 Score=166.02 Aligned_cols=188 Identities=22% Similarity=0.260 Sum_probs=156.8
Q ss_pred CCCCCccceeeCCCCCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCC
Q 009965 55 ADPCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134 (521)
Q Consensus 55 ~~~c~w~gv~C~~~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~ 134 (521)
.+.|.|.|+.|.- ...++.++++++.++. +|..+. ++|++|+|++|++++..+..|..+++|++|+|++|+++...
T Consensus 2 ~~~C~~~~~~C~c-~~~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~ 77 (270)
T 2o6q_A 2 EALCKKDGGVCSC-NNNKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP 77 (270)
T ss_dssp CCCBGGGTCSBEE-ETTTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCC
T ss_pred CccCCCCCCCCEe-CCCCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeC
Confidence 3689999999863 3456789999999997 676554 68999999999999887789999999999999999999666
Q ss_pred CcccCCCccCceeecccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc-----cC
Q 009965 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CH 209 (521)
Q Consensus 135 p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~ 209 (521)
+..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..|..... ..++..+++++|.++++ ..
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--l~~L~~L~Ls~n~l~~~~~~~~~~ 155 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDS--LTKLTYLSLGYNELQSLPKGVFDK 155 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTT--CTTCCEEECCSSCCCCCCTTTTTT
T ss_pred hhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCc--CcCCCEEECCCCcCCccCHhHccC
Confidence 667799999999999999999777778899999999999999999554433221 35788999999998764 45
Q ss_pred CCCCCEEeccCCccccCCcccc---ccCCCcccCCCcCCCCC
Q 009965 210 LSQLKVADFSYNFFVGSIPKCL---EYLPSTSFQGNCLQNKD 248 (521)
Q Consensus 210 l~~L~~L~ls~N~l~g~ip~~l---~~l~~l~~~~N~l~~~~ 248 (521)
+++|+.|++++|.+++..|..+ .+|+.+++++|.++...
T Consensus 156 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 197 (270)
T 2o6q_A 156 LTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVP 197 (270)
T ss_dssp CTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCC
Confidence 7899999999999997666554 56777899999887653
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.77 E-value=8.1e-19 Score=196.90 Aligned_cols=188 Identities=21% Similarity=0.226 Sum_probs=155.6
Q ss_pred CCCccceeeCCCCCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccC-CccccCCCCCcEEEccCCcCCCCCC
Q 009965 57 PCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGII-PKELGLLKRLKILDLGTNQLTGPIP 135 (521)
Q Consensus 57 ~c~w~gv~C~~~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~g~~p 135 (521)
.|.|+.|.+ ...+++.|||++|.+++..|..|..+++|++|+|++|.+.+.+ |..|.++++|++|+|++|.+++..|
T Consensus 13 ~~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p 90 (844)
T 3j0a_A 13 FCNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHP 90 (844)
T ss_dssp CCCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECT
T ss_pred CCCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCH
Confidence 456777776 3678999999999999999999999999999999999776666 7889999999999999999998889
Q ss_pred cccCCCccCceeecccccCcccCchh--hhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCccc-----
Q 009965 136 PEIGNLTGLVKINLQSNGLTGRLPAE--LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLC----- 208 (521)
Q Consensus 136 ~~~~~l~~L~~L~Ls~N~l~g~~p~~--~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~----- 208 (521)
..|.++++|++|+|++|.+++.+|.. |+++++|++|+|++|.+++..|..... ...++..+++++|.+++..
T Consensus 91 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~-~L~~L~~L~Ls~N~i~~~~~~~l~ 169 (844)
T 3j0a_A 91 DAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFG-KLNSLKSIDFSSNQIFLVCEHELE 169 (844)
T ss_dssp TSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGG-TCSSCCEEEEESSCCCCCCSGGGH
T ss_pred hHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHh-hCCCCCEEECCCCcCCeeCHHHcc
Confidence 99999999999999999999877766 899999999999999998765532221 2357788889998886542
Q ss_pred CC--CCCCEEeccCCccccCCcccccc---------CCCcccCCCcCCCC
Q 009965 209 HL--SQLKVADFSYNFFVGSIPKCLEY---------LPSTSFQGNCLQNK 247 (521)
Q Consensus 209 ~l--~~L~~L~ls~N~l~g~ip~~l~~---------l~~l~~~~N~l~~~ 247 (521)
.+ ++|+.|++++|.+.+.+|..+.. ++.+++++|.+.+.
T Consensus 170 ~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~ 219 (844)
T 3j0a_A 170 PLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVD 219 (844)
T ss_dssp HHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTT
T ss_pred cccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchh
Confidence 23 78899999999998887765433 56778888866654
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.5e-18 Score=190.11 Aligned_cols=162 Identities=21% Similarity=0.228 Sum_probs=140.8
Q ss_pred CCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceee
Q 009965 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
..+++.|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|+++++|++|+
T Consensus 24 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 24 PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103 (680)
T ss_dssp CTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEE
Confidence 35799999999999998888899999999999999999999999999999999999999999966556799999999999
Q ss_pred cccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCccc-------CCCCCCEEeccCC
Q 009965 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLC-------HLSQLKVADFSYN 221 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~-------~l~~L~~L~ls~N 221 (521)
|++|++++..|..|+++++|++|+|++|.+++..|..... ..++..++++.|.++++. .+++|+.|++++|
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~--l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n 181 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQ--LENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSN 181 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSC--CTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTC
T ss_pred CCCCccCccChhHccccCCCCEEECCCCcccccCchhhcc--cccCCEEEccCCcccccCHHHhhccccccccEEECCCC
Confidence 9999999877789999999999999999999776654322 357888899999887643 3578999999999
Q ss_pred ccccCCccccc
Q 009965 222 FFVGSIPKCLE 232 (521)
Q Consensus 222 ~l~g~ip~~l~ 232 (521)
.+++..|..+.
T Consensus 182 ~l~~~~~~~~~ 192 (680)
T 1ziw_A 182 QIKEFSPGCFH 192 (680)
T ss_dssp CCCCBCTTGGG
T ss_pred cccccChhhhh
Confidence 99887776543
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.8e-18 Score=176.64 Aligned_cols=153 Identities=20% Similarity=0.212 Sum_probs=105.1
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|++++|.++...+..+..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 45677888888877655555677888888888888887776777788888888888888887777777778888888888
Q ss_pred ccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc--cCCCCCCEEeccCCccc
Q 009965 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL--CHLSQLKVADFSYNFFV 224 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~--~~l~~L~~L~ls~N~l~ 224 (521)
++|+++...+..|.++++|++|+|++|++++..|..... ..++..+++++|.++++ ..+++|+.|++++|.++
T Consensus 125 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~--l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~ 199 (390)
T 3o6n_A 125 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQA--TTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLS 199 (390)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSS--CTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCS
T ss_pred CCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccC--CCCCCEEECCCCcCCccccccccccceeeccccccc
Confidence 888887433344577888888888888877544432221 24566666666666543 33555555555555554
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.77 E-value=3.5e-19 Score=197.96 Aligned_cols=173 Identities=18% Similarity=0.266 Sum_probs=151.9
Q ss_pred CCCEEEEEecCCCCCc-----------------cCCcccc--CCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCc
Q 009965 69 RDRVLKINISGSSLKG-----------------FLAPELG--LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQ 129 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~-----------------~~p~~l~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 129 (521)
..+++.|+|++|.|+| .+|+.++ ++++|++|+|++|++.+.+|..|+++++|++|+|++|+
T Consensus 447 L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 447 LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred CCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 3579999999999999 4899988 99999999999999999999999999999999999998
Q ss_pred -CCC-CCCcccCCCc-------cCceeecccccCcccCch--hhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccc
Q 009965 130 -LTG-PIPPEIGNLT-------GLVKINLQSNGLTGRLPA--ELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMY 198 (521)
Q Consensus 130 -l~g-~~p~~~~~l~-------~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~ 198 (521)
++| .+|..++.++ +|++|+|++|+++ .+|. .|+++++|+.|+|++|+++ .+| ... ...++..++
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~--~L~~L~~L~ 601 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFG--TNVKLTDLK 601 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCC--TTSEESEEE
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhc--CCCcceEEE
Confidence 998 8998877776 9999999999999 8998 9999999999999999999 888 222 235788899
Q ss_pred cccCCcCcc----cCCCC-CCEEeccCCccccCCcccccc-----CCCcccCCCcCCCC
Q 009965 199 ASSANLTGL----CHLSQ-LKVADFSYNFFVGSIPKCLEY-----LPSTSFQGNCLQNK 247 (521)
Q Consensus 199 l~~n~l~~~----~~l~~-L~~L~ls~N~l~g~ip~~l~~-----l~~l~~~~N~l~~~ 247 (521)
+++|.++.+ ..+++ |+.|++++|.++ .+|..+.. |..+++++|.+.+.
T Consensus 602 Ls~N~l~~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ 659 (876)
T 4ecn_A 602 LDYNQIEEIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSE 659 (876)
T ss_dssp CCSSCCSCCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTT
T ss_pred CcCCccccchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCc
Confidence 999988754 45677 999999999999 88877643 66788999988764
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=9.2e-19 Score=189.24 Aligned_cols=173 Identities=17% Similarity=0.101 Sum_probs=92.8
Q ss_pred CCEEEEEecCCCCCcc--CCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCC-cccCCCccCce
Q 009965 70 DRVLKINISGSSLKGF--LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP-PEIGNLTGLVK 146 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~--~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~ 146 (521)
.+++.|+|++|.+++. +|..+..+++|++|+|++|.+++ +|..+..+++|++|++++|++++..| ..+.++++|++
T Consensus 350 ~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 428 (606)
T 3vq2_A 350 PSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLY 428 (606)
T ss_dssp TTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCE
T ss_pred CCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCE
Confidence 4566666666666654 25555666666666666666553 44555556666666666666555544 45555555666
Q ss_pred eecccccCcccCchhhhCCCCCCEEeCCCCCCCcc-CCCCCCCcccccccccccccCCcCc-----ccCCCCCCEEeccC
Q 009965 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQGA-VPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSY 220 (521)
Q Consensus 147 L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~-~p~~~~~~~~~~l~~l~l~~n~l~~-----~~~l~~L~~L~ls~ 220 (521)
|++++|.+++..|..|..+++|++|++++|++++. +|..... ..++..+++++|.+++ +..+++|+.|++++
T Consensus 429 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~--l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 506 (606)
T 3vq2_A 429 LDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFAN--TTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSH 506 (606)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTT--CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhcc--CCCCCEEECCCCcCCccChhhhcccccCCEEECCC
Confidence 66665555555555555555555555555555542 3332211 1344555555555443 23345555555555
Q ss_pred CccccCCccccc---cCCCcccCCCcCC
Q 009965 221 NFFVGSIPKCLE---YLPSTSFQGNCLQ 245 (521)
Q Consensus 221 N~l~g~ip~~l~---~l~~l~~~~N~l~ 245 (521)
|++++.+|..+. +|+.+++++|+++
T Consensus 507 N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 534 (606)
T 3vq2_A 507 NNLLFLDSSHYNQLYSLSTLDCSFNRIE 534 (606)
T ss_dssp SCCSCEEGGGTTTCTTCCEEECTTSCCC
T ss_pred CcCCCcCHHHccCCCcCCEEECCCCcCc
Confidence 555554454433 2334455555544
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.77 E-value=6.5e-19 Score=185.22 Aligned_cols=174 Identities=22% Similarity=0.184 Sum_probs=120.0
Q ss_pred CEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCc--------------
Q 009965 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPP-------------- 136 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-------------- 136 (521)
+|+.|+|++|.+++..|..|..+++|++|+|++|.+++..| +..+++|++|+|++|.+++..+.
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~ 112 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNIS 112 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCC
Confidence 56666666666666656666666666666666666665544 66666666666665555422110
Q ss_pred --ccCCCccCceeecccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCccc---CCC
Q 009965 137 --EIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLC---HLS 211 (521)
Q Consensus 137 --~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~---~l~ 211 (521)
....+++|+.|+|++|.+++..|..|+.+++|++|+|++|.+++.+|..... ....+..+++++|.++++. .++
T Consensus 113 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~-~l~~L~~L~Ls~N~l~~~~~~~~l~ 191 (487)
T 3oja_A 113 RVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAA-SSDTLEHLNLQYNFIYDVKGQVVFA 191 (487)
T ss_dssp CEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGG-GTTTCCEEECTTSCCCEEECCCCCT
T ss_pred CCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhh-hCCcccEEecCCCccccccccccCC
Confidence 0123577888888888888888888888899999999999998776654321 1256788888888887643 477
Q ss_pred CCCEEeccCCccccCCcc--ccccCCCcccCCCcCCCC
Q 009965 212 QLKVADFSYNFFVGSIPK--CLEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 212 ~L~~L~ls~N~l~g~ip~--~l~~l~~l~~~~N~l~~~ 247 (521)
+|+.|+|++|.+++..|. .+.+|..+++++|.+.+.
T Consensus 192 ~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~l 229 (487)
T 3oja_A 192 KLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVLI 229 (487)
T ss_dssp TCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCEE
T ss_pred CCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCccc
Confidence 889999999998875553 235567788888887753
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-18 Score=187.00 Aligned_cols=154 Identities=19% Similarity=0.177 Sum_probs=119.8
Q ss_pred cCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCC--CCCcccCCCccCceeecccccCcccCch-hhhCCCC
Q 009965 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG--PIPPEIGNLTGLVKINLQSNGLTGRLPA-ELGNLIS 167 (521)
Q Consensus 91 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~ 167 (521)
..+++|++|+|++|++++.+|..+..+++|++|+|++|++++ .+|..+.++++|++|+|++|++++.+|. .+..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 677888888888888888888888888888888888888885 3346788888888888888888875655 4777888
Q ss_pred CCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCccc----CCCCCCEEeccCCccccCCccc-c---ccCCCccc
Q 009965 168 LEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLC----HLSQLKVADFSYNFFVGSIPKC-L---EYLPSTSF 239 (521)
Q Consensus 168 L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~----~l~~L~~L~ls~N~l~g~ip~~-l---~~l~~l~~ 239 (521)
|++|+|++|++++.+|.... ..+..+++++|+++.+. .+++|+.|++++|+++ .+|.. + .+++.+++
T Consensus 430 L~~L~l~~n~l~~~~~~~l~----~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l 504 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLP----PKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWL 504 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCC----TTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEEC
T ss_pred CCEEECCCCCCCcchhhhhc----CcCCEEECCCCcCcccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEe
Confidence 88888888888877766432 46778888888887543 5788899999999988 56654 4 45667888
Q ss_pred CCCcCCCCCC
Q 009965 240 QGNCLQNKDP 249 (521)
Q Consensus 240 ~~N~l~~~~~ 249 (521)
++|++.+.|+
T Consensus 505 ~~N~~~c~c~ 514 (562)
T 3a79_B 505 HDNPWDCTCP 514 (562)
T ss_dssp CSCCBCCCHH
T ss_pred cCCCcCCCcc
Confidence 8998887664
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.77 E-value=7e-19 Score=177.26 Aligned_cols=118 Identities=20% Similarity=0.178 Sum_probs=100.4
Q ss_pred CCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCC-cccCCCccCcee
Q 009965 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP-PEIGNLTGLVKI 147 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L 147 (521)
..+++.|+|++|.+++..|..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+ ..+..+++|++|
T Consensus 75 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L 154 (353)
T 2z80_A 75 CVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQIL 154 (353)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred CCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEE
Confidence 3579999999999999888889999999999999999997655568999999999999999984333 478899999999
Q ss_pred ecccc-cCcccCchhhhCCCCCCEEeCCCCCCCccCCCCC
Q 009965 148 NLQSN-GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGS 186 (521)
Q Consensus 148 ~Ls~N-~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~ 186 (521)
++++| .+++..|..|.++++|++|++++|++++..|...
T Consensus 155 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l 194 (353)
T 2z80_A 155 RVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSL 194 (353)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTT
T ss_pred ECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHH
Confidence 99998 4776667889999999999999999987766543
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.7e-18 Score=187.17 Aligned_cols=160 Identities=19% Similarity=0.155 Sum_probs=142.6
Q ss_pred CCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceee
Q 009965 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
...++.|+|++|.+++..|..|+.+++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+
T Consensus 32 ~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 111 (606)
T 3t6q_A 32 PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLF 111 (606)
T ss_dssp CTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEE
T ss_pred CCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEee
Confidence 35799999999999998899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCcccCchhhhCCCCCCEEeCCCCCCCcc-CCCCCCCcccccccccccccCCcCcc-----cCCCCCC--EEeccC
Q 009965 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGA-VPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLK--VADFSY 220 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~-~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~l~~L~--~L~ls~ 220 (521)
|++|++++..|..|+++++|++|+|++|++++. +|.... ..++..+++++|.++++ ..+++|+ .|++++
T Consensus 112 L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~---l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~ 188 (606)
T 3t6q_A 112 FIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFP---TEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNG 188 (606)
T ss_dssp CTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCC---CTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTT
T ss_pred ccccCcccCCcchhccCCcccEEECCCCcccccCcccccC---CcccCEEEcccCcccccChhhhhhhcccceeEEecCC
Confidence 999999987788899999999999999999963 343322 36788999999998764 4678888 899999
Q ss_pred CccccCCcccc
Q 009965 221 NFFVGSIPKCL 231 (521)
Q Consensus 221 N~l~g~ip~~l 231 (521)
|.+++..|..+
T Consensus 189 n~l~~~~~~~~ 199 (606)
T 3t6q_A 189 NDIAGIEPGAF 199 (606)
T ss_dssp CCCCEECTTTT
T ss_pred CccCccChhHh
Confidence 99998777554
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.77 E-value=8.1e-19 Score=186.61 Aligned_cols=176 Identities=24% Similarity=0.313 Sum_probs=119.7
Q ss_pred CCCCCCCCCCCC-----Cccce-eeCCCCCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCC
Q 009965 47 LSNWNALDADPC-----HWTGI-ACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL 120 (521)
Q Consensus 47 l~~W~~~~~~~c-----~w~gv-~C~~~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 120 (521)
+.+|.. +.+|| .|.|+ .|. ..+++.|+|++|.|++ +|..+ +++|++|+|++|+|+ .+| ..+++|
T Consensus 33 l~~W~~-~~~~~~~~~~~~~~l~~C~--~~~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L 102 (571)
T 3cvr_A 33 WDKWEK-QALPGENRNEAVSLLKECL--INQFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASL 102 (571)
T ss_dssp HHHHHT-TCCTTCCHHHHHHHHHHHH--HTTCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTC
T ss_pred HHHHhc-cCCccccccchhhhccccc--cCCccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCC
Confidence 345654 45678 79999 786 3578999999999988 77665 378889999999888 566 457888
Q ss_pred cEEEccCCcCCCCCCcccCCCccCceeecccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccc
Q 009965 121 KILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYAS 200 (521)
Q Consensus 121 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~ 200 (521)
++|+|++|+|++ +|. +.+ +|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|.. ..++..++++
T Consensus 103 ~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~~-----l~~L~~L~Ls 168 (571)
T 3cvr_A 103 EYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPEL-----PTSLEVLSVR 168 (571)
T ss_dssp CEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCCC-----CTTCCEEECC
T ss_pred CEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCCc-----CCCcCEEECC
Confidence 888888888886 676 655 78888888888885 665 56778888888887774 5541 2356666666
Q ss_pred cCCcCcccCC-CCCCEEeccCCccccCCccccccC-------CCcccCCCcCCCC
Q 009965 201 SANLTGLCHL-SQLKVADFSYNFFVGSIPKCLEYL-------PSTSFQGNCLQNK 247 (521)
Q Consensus 201 ~n~l~~~~~l-~~L~~L~ls~N~l~g~ip~~l~~l-------~~l~~~~N~l~~~ 247 (521)
+|.++++..+ ++|+.|+|++|+|+ .+|....+| ..+++++|.++..
T Consensus 169 ~N~L~~lp~l~~~L~~L~Ls~N~L~-~lp~~~~~L~~~~~~L~~L~Ls~N~l~~l 222 (571)
T 3cvr_A 169 NNQLTFLPELPESLEALDVSTNLLE-SLPAVPVRNHHSEETEIFFRCRENRITHI 222 (571)
T ss_dssp SSCCSCCCCCCTTCCEEECCSSCCS-SCCCCC--------CCEEEECCSSCCCCC
T ss_pred CCCCCCcchhhCCCCEEECcCCCCC-chhhHHHhhhcccccceEEecCCCcceec
Confidence 6666554322 45666666666666 455411244 5556666655543
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.76 E-value=7.3e-19 Score=186.48 Aligned_cols=154 Identities=19% Similarity=0.190 Sum_probs=92.7
Q ss_pred cCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCC--CCCcccCCCccCceeecccccCcccCchh-hhCCCC
Q 009965 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG--PIPPEIGNLTGLVKINLQSNGLTGRLPAE-LGNLIS 167 (521)
Q Consensus 91 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~ 167 (521)
..+++|++|+|++|++++.+|..+..+++|++|+|++|++++ .+|..+..+++|++|+|++|++++.+|.. +..+++
T Consensus 321 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 400 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKS 400 (520)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTT
T ss_pred hhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCcc
Confidence 455666666666666666666666666666666666666664 34455666666666666666666545543 555666
Q ss_pred CCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc----cCCCCCCEEeccCCccccCCccc-c---ccCCCccc
Q 009965 168 LEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL----CHLSQLKVADFSYNFFVGSIPKC-L---EYLPSTSF 239 (521)
Q Consensus 168 L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~----~~l~~L~~L~ls~N~l~g~ip~~-l---~~l~~l~~ 239 (521)
|++|+|++|++++.+|.... ..+..+++++|.++.+ ..+++|+.|++++|+++ .+|.. + .+++.+++
T Consensus 401 L~~L~Ls~N~l~~~~~~~l~----~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l 475 (520)
T 2z7x_B 401 LLSLNMSSNILTDTIFRCLP----PRIKVLDLHSNKIKSIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWL 475 (520)
T ss_dssp CCEEECCSSCCCGGGGGSCC----TTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEEC
T ss_pred CCEEECcCCCCCcchhhhhc----ccCCEEECCCCcccccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEEC
Confidence 66666666666655554321 3556666666666543 24666777777777776 45543 3 34555667
Q ss_pred CCCcCCCCCC
Q 009965 240 QGNCLQNKDP 249 (521)
Q Consensus 240 ~~N~l~~~~~ 249 (521)
++|++.+.|+
T Consensus 476 ~~N~~~c~c~ 485 (520)
T 2z7x_B 476 HTNPWDCSCP 485 (520)
T ss_dssp CSSCBCCCHH
T ss_pred cCCCCcccCC
Confidence 7776666543
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.76 E-value=4.6e-18 Score=166.43 Aligned_cols=171 Identities=26% Similarity=0.291 Sum_probs=142.7
Q ss_pred CCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceee
Q 009965 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
..+++.+++++|+++. +|..+. +.|+.|+|++|++++..|..|..+++|++|+|++|++++. |.. +.+++|++|+
T Consensus 9 l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~-~~l~~L~~L~ 83 (290)
T 1p9a_G 9 VASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QVD-GTLPVLGTLD 83 (290)
T ss_dssp STTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-ECC-SCCTTCCEEE
T ss_pred cCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cCC-CCCCcCCEEE
Confidence 3478999999999986 666554 7899999999999998899999999999999999999854 433 7899999999
Q ss_pred cccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc-----cCCCCCCEEeccCCcc
Q 009965 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFF 223 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~l~~L~~L~ls~N~l 223 (521)
|++|+++ .+|..+..+++|++|+|++|++++ +|...+.. ..++..+++++|+++++ ..+++|+.|+|++|++
T Consensus 84 Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~-l~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 160 (290)
T 1p9a_G 84 LSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTS-LPLGALRG-LGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL 160 (290)
T ss_dssp CCSSCCS-SCCCCTTTCTTCCEEECCSSCCCC-CCSSTTTT-CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred CCCCcCC-cCchhhccCCCCCEEECCCCcCcc-cCHHHHcC-CCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcC
Confidence 9999999 789999999999999999999995 44332221 25788999999998764 4578999999999999
Q ss_pred ccCCccc---cccCCCcccCCCcCCCC
Q 009965 224 VGSIPKC---LEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 224 ~g~ip~~---l~~l~~l~~~~N~l~~~ 247 (521)
++..+.. +.+|+.+++++|.++..
T Consensus 161 ~~l~~~~~~~l~~L~~L~L~~N~l~~i 187 (290)
T 1p9a_G 161 TELPAGLLNGLENLDTLLLQENSLYTI 187 (290)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CccCHHHhcCcCCCCEEECCCCcCCcc
Confidence 9544443 45677889999988754
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=2.9e-18 Score=185.35 Aligned_cols=180 Identities=19% Similarity=0.192 Sum_probs=135.2
Q ss_pred CCEEEEEecCCCCCccC--CccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcc-cCCCccCce
Q 009965 70 DRVLKINISGSSLKGFL--APELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPE-IGNLTGLVK 146 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~--p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~ 146 (521)
.+++.|++++|.+++.. +..+..+++|++|+|++|.+.+..|..|..+++|++|+|++|++++..|.. +..+++|++
T Consensus 350 ~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 429 (606)
T 3t6q_A 350 ENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKV 429 (606)
T ss_dssp TTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCE
T ss_pred CcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCE
Confidence 46888888888888765 667888888888888888888888888888888888888888888766544 788888888
Q ss_pred eecccccCcccCchhhhCCCCCCEEeCCCCCCCcc-CCCCCCCcccccccccccccCCcCc-----ccCCCCCCEEeccC
Q 009965 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQGA-VPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSY 220 (521)
Q Consensus 147 L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~-~p~~~~~~~~~~l~~l~l~~n~l~~-----~~~l~~L~~L~ls~ 220 (521)
|+|++|.+++..|..|..+++|++|+|++|++++. +|.........++..+++++|.+++ +..+++|+.|++++
T Consensus 430 L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 509 (606)
T 3t6q_A 430 LNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSH 509 (606)
T ss_dssp EECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCC
Confidence 88888888887888888888888888888888763 2322112223467777888877764 34567888888888
Q ss_pred CccccCCccccccCC--CcccCCCcCCCCCC
Q 009965 221 NFFVGSIPKCLEYLP--STSFQGNCLQNKDP 249 (521)
Q Consensus 221 N~l~g~ip~~l~~l~--~l~~~~N~l~~~~~ 249 (521)
|++++..|..+.+++ .+++++|.++...+
T Consensus 510 N~l~~~~~~~l~~l~~L~L~L~~N~l~~~~~ 540 (606)
T 3t6q_A 510 NRLTSSSIEALSHLKGIYLNLASNHISIILP 540 (606)
T ss_dssp SCCCGGGGGGGTTCCSCEEECCSSCCCCCCG
T ss_pred CccCcCChhHhCcccccEEECcCCcccccCH
Confidence 888877777765554 45667777776544
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.76 E-value=6.3e-19 Score=161.73 Aligned_cols=132 Identities=26% Similarity=0.342 Sum_probs=110.5
Q ss_pred EEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCc-cccCCCCCcEEEccCCcCCCCCCcccCCCccCceeeccc
Q 009965 73 LKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPK-ELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151 (521)
Q Consensus 73 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 151 (521)
+.|++++|+++. +|..+.. +|++|+|++|+|++..+. .|..+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~~-ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLKE-IPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCSS-CCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcCc-CccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 357777888854 6665543 899999999999876664 488999999999999999988899999999999999999
Q ss_pred ccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcccCCCCCCEEeccCCccccCCc
Q 009965 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP 228 (521)
Q Consensus 152 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~ip 228 (521)
|+|++..|..|.++++|++|+|++|++++.+|.. +..+++|++|++++|.+++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~---------------------~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGS---------------------FEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTS---------------------STTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHH---------------------hhcCCCCCEEEeCCCCccCcCc
Confidence 9999888888999999999999999999776642 3456789999999999987765
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.2e-18 Score=175.98 Aligned_cols=173 Identities=18% Similarity=0.126 Sum_probs=147.1
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|+|++|.+++..+..|..+++|++|+|++|.+++..|..|..+++|++|+|++|+++...+..|.++++|++|+|
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 148 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 148 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEEC
Confidence 47899999999999887889999999999999999999888888999999999999999999544445789999999999
Q ss_pred ccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcccCCCCCCEEeccCCccccCCcc
Q 009965 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPK 229 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~ip~ 229 (521)
++|.+++..|..|..+++|++|++++|++++. +.. ....+..++++.|.++++...++|+.|++++|.++.....
T Consensus 149 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~----~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~ 223 (390)
T 3o6n_A 149 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-DLS----LIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGP 223 (390)
T ss_dssp CSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC-CGG----GCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECC
T ss_pred CCCccCccChhhccCCCCCCEEECCCCcCCcc-ccc----cccccceeecccccccccCCCCcceEEECCCCeeeecccc
Confidence 99999988888899999999999999999853 321 2246788899999999888888999999999999855334
Q ss_pred ccccCCCcccCCCcCCCC
Q 009965 230 CLEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 230 ~l~~l~~l~~~~N~l~~~ 247 (521)
...+++.+++++|.+.+.
T Consensus 224 ~~~~L~~L~l~~n~l~~~ 241 (390)
T 3o6n_A 224 VNVELTILKLQHNNLTDT 241 (390)
T ss_dssp CCSSCCEEECCSSCCCCC
T ss_pred ccccccEEECCCCCCccc
Confidence 457888999999987764
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.76 E-value=5.8e-18 Score=157.19 Aligned_cols=166 Identities=20% Similarity=0.147 Sum_probs=125.9
Q ss_pred EEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecccc
Q 009965 73 LKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152 (521)
Q Consensus 73 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 152 (521)
+.++++++.++. +|..+ .++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRTS-VPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCccC-CCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 468899999987 45443 568999999999999877778999999999999999999777777899999999999999
Q ss_pred cCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc-----cCCCCCCEEeccCCccccCC
Q 009965 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFVGSI 227 (521)
Q Consensus 153 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~l~~L~~L~ls~N~l~g~i 227 (521)
++++..+..|..+++|++|+|++|++++..+..... ..++..+++++|.++++ ..+++|+.|++++|.+.+..
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~--l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 164 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDK--LTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC 164 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT--CTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCT
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhcc--CCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCC
Confidence 999777777899999999999999999544332111 23566666666666542 33566777777777666544
Q ss_pred ccccccCCCcccCCCcCCCC
Q 009965 228 PKCLEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 228 p~~l~~l~~l~~~~N~l~~~ 247 (521)
| .+..+++..|.+++.
T Consensus 165 ~----~l~~L~~~~n~~~g~ 180 (208)
T 2o6s_A 165 P----GIRYLSEWINKHSGV 180 (208)
T ss_dssp T----TTHHHHHHHHHCTTT
T ss_pred C----CHHHHHHHHHhCCce
Confidence 3 344555556655553
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.76 E-value=6e-18 Score=182.58 Aligned_cols=88 Identities=19% Similarity=0.200 Sum_probs=77.2
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|+|++|.+++..|..|+.+++|++|+|++|.|++..+..|+.+++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 99 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 178 (597)
T 3oja_B 99 HTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQL 178 (597)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEEC
Confidence 47899999999999988888899999999999999999766666789999999999999999888888999999999999
Q ss_pred ccccCccc
Q 009965 150 QSNGLTGR 157 (521)
Q Consensus 150 s~N~l~g~ 157 (521)
++|.+++.
T Consensus 179 ~~N~l~~~ 186 (597)
T 3oja_B 179 SSNRLTHV 186 (597)
T ss_dssp TTSCCSBC
T ss_pred cCCCCCCc
Confidence 99988854
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=8e-18 Score=167.81 Aligned_cols=171 Identities=18% Similarity=0.246 Sum_probs=144.0
Q ss_pred CCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceee
Q 009965 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
..+++.|+|++|.+++..|..|..+++|++|+|++|+++ .+|..+. ++|++|++++|++++..+..|.++++|++|+
T Consensus 75 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 151 (330)
T 1xku_A 75 LKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVE 151 (330)
T ss_dssp CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEE
Confidence 357999999999999988999999999999999999998 5676655 7999999999999988888899999999999
Q ss_pred cccccCc--ccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCc-----ccCCCCCCEEeccCC
Q 009965 149 LQSNGLT--GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYN 221 (521)
Q Consensus 149 Ls~N~l~--g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~-----~~~l~~L~~L~ls~N 221 (521)
|++|.++ +..|..|.++++|++|++++|.++ .+|.... ..+..+++++|.+++ +..+++|+.|++++|
T Consensus 152 l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~----~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 226 (330)
T 1xku_A 152 LGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP----PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFN 226 (330)
T ss_dssp CCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC----TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSS
T ss_pred CCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc----ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCC
Confidence 9999996 477889999999999999999998 5665433 467788888888764 446788899999999
Q ss_pred ccccCCcccc---ccCCCcccCCCcCCCC
Q 009965 222 FFVGSIPKCL---EYLPSTSFQGNCLQNK 247 (521)
Q Consensus 222 ~l~g~ip~~l---~~l~~l~~~~N~l~~~ 247 (521)
.+++..|..+ .+|+.+++++|.+...
T Consensus 227 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 255 (330)
T 1xku_A 227 SISAVDNGSLANTPHLRELHLNNNKLVKV 255 (330)
T ss_dssp CCCEECTTTGGGSTTCCEEECCSSCCSSC
T ss_pred cCceeChhhccCCCCCCEEECCCCcCccC
Confidence 8887666554 4566788888877753
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.75 E-value=7.5e-18 Score=154.53 Aligned_cols=126 Identities=24% Similarity=0.328 Sum_probs=114.2
Q ss_pred CCccceeeCC---------CCCCEEEEEecCCCCCccCCc-cccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccC
Q 009965 58 CHWTGIACSD---------ARDRVLKINISGSSLKGFLAP-ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGT 127 (521)
Q Consensus 58 c~w~gv~C~~---------~~~~l~~L~L~~n~l~~~~p~-~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 127 (521)
|.|+.+.|.. ...+++.|+|++|.+++..+. .|..+++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 8 C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 6788888863 123789999999999987665 489999999999999999999999999999999999999
Q ss_pred CcCCCCCCcccCCCccCceeecccccCcccCchhhhCCCCCCEEeCCCCCCCccCC
Q 009965 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183 (521)
Q Consensus 128 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p 183 (521)
|+|++..|..|.++++|++|+|++|++++..|..|..+++|++|+|++|.+++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 99998888889999999999999999999999999999999999999999987554
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.75 E-value=9.5e-19 Score=173.03 Aligned_cols=86 Identities=17% Similarity=0.098 Sum_probs=41.5
Q ss_pred CCCCEEECcCCcccccCCccc--cCCCCCcEEEccCCcCCCCCC----cccCCCccCceeecccccCcccCchhhhCCCC
Q 009965 94 TYLQELILHGNNLIGIIPKEL--GLLKRLKILDLGTNQLTGPIP----PEIGNLTGLVKINLQSNGLTGRLPAELGNLIS 167 (521)
Q Consensus 94 ~~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~Ls~N~l~g~~p----~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~ 167 (521)
++|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..| ..+..+++|++|+|++|++++..|..|+.+++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 335555555555554444444 445555555555555544333 22334445555555555554444444455555
Q ss_pred CCEEeCCCCCCC
Q 009965 168 LEELHLDRNRLQ 179 (521)
Q Consensus 168 L~~L~Ls~N~l~ 179 (521)
|++|+|++|++.
T Consensus 171 L~~L~Ls~N~l~ 182 (310)
T 4glp_A 171 LTSLDLSDNPGL 182 (310)
T ss_dssp CCEEECCSCTTC
T ss_pred CCEEECCCCCCc
Confidence 555555555444
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=3e-18 Score=187.77 Aligned_cols=111 Identities=21% Similarity=0.254 Sum_probs=71.2
Q ss_pred CEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecc
Q 009965 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
+++.|+|++|.+++..|..|+.+++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|+++++|++|+|+
T Consensus 50 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 129 (680)
T 1ziw_A 50 QLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLS 129 (680)
T ss_dssp TCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECC
T ss_pred cCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECC
Confidence 56666666666666666666666666666666666665444456666666666666666665555666666666666666
Q ss_pred cccCcccCchhhhCCCCCCEEeCCCCCCCcc
Q 009965 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGA 181 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ 181 (521)
+|.+++..|..++++++|++|++++|.+++.
T Consensus 130 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 160 (680)
T 1ziw_A 130 HNGLSSTKLGTQVQLENLQELLLSNNKIQAL 160 (680)
T ss_dssp SSCCSCCCCCSSSCCTTCCEEECCSSCCCCB
T ss_pred CCcccccCchhhcccccCCEEEccCCccccc
Confidence 6666666666666666666666666666543
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.74 E-value=4.1e-19 Score=195.33 Aligned_cols=154 Identities=23% Similarity=0.177 Sum_probs=69.7
Q ss_pred hhHHHHHHHHHHhcccCCCCCCCCCCCCCCCCCCccceeeCCCCCCEEEEEecCCCCCc---------------------
Q 009965 26 TNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKG--------------------- 84 (521)
Q Consensus 26 ~~~~~~L~~~k~~~~~~~~~~l~~W~~~~~~~c~w~gv~C~~~~~~l~~L~L~~n~l~~--------------------- 84 (521)
..+..+|+++..+........-..|.......+.|.++.++ .++++.|+|.+|.+..
T Consensus 131 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--~~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~~ 208 (727)
T 4b8c_D 131 DCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVS--TPLTPKIELFANGKDEANQALLQHKKLSQYSIDEDDD 208 (727)
T ss_dssp -CCCHHHHHHHHHHHHHHTTC-----------------------------------------------------------
T ss_pred ccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceec--CCccceEEeeCCCCCcchhhHhhcCccCcccccCccc
Confidence 45677899988887543333345675544556789888776 3555555555554443
Q ss_pred ------cCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecccccCcccC
Q 009965 85 ------FLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRL 158 (521)
Q Consensus 85 ------~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~ 158 (521)
..+..+..++.|+.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|++|++|++|+|++|+|+ .+
T Consensus 209 ~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~l 285 (727)
T 4b8c_D 209 IENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SL 285 (727)
T ss_dssp -------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SC
T ss_pred cccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-cc
Confidence 12444555666666666666665 45555556666666666666666 56666666666666666666666 55
Q ss_pred chhhhCCCCCCEEeCCCCCCCccCCCC
Q 009965 159 PAELGNLISLEELHLDRNRLQGAVPAG 185 (521)
Q Consensus 159 p~~~~~l~~L~~L~Ls~N~l~g~~p~~ 185 (521)
|..|++|++|++|+|++|.|+ .+|..
T Consensus 286 p~~~~~l~~L~~L~L~~N~l~-~lp~~ 311 (727)
T 4b8c_D 286 PAELGSCFQLKYFYFFDNMVT-TLPWE 311 (727)
T ss_dssp CSSGGGGTTCSEEECCSSCCC-CCCSS
T ss_pred ChhhcCCCCCCEEECCCCCCC-ccChh
Confidence 666666666666666666665 55543
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.74 E-value=4.2e-18 Score=178.62 Aligned_cols=178 Identities=21% Similarity=0.206 Sum_probs=131.5
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|+|++|.+++..+..|..+++|++|+|++|++++..|..|..+++|++|+|++|.+++..|..|.++++|+.|+|
T Consensus 80 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 159 (477)
T 2id5_A 80 FNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTL 159 (477)
T ss_dssp TTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEE
T ss_pred ccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEEC
Confidence 57899999999998876667889999999999999999888888999999999999999998888888999999999999
Q ss_pred ccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCc----------------------ccccccccccccCCcCcc
Q 009965 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSG----------------------YTANIHGMYASSANLTGL 207 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~----------------------~~~~l~~l~l~~n~l~~~ 207 (521)
++|++++..+..|.++++|+.|+|++|.+++..+...... ...++..+++++|.++.+
T Consensus 160 ~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 239 (477)
T 2id5_A 160 EKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAV 239 (477)
T ss_dssp ESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSC
T ss_pred CCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCccccc
Confidence 9999987666778888888888888888875444321110 001344555666665543
Q ss_pred -----cCCCCCCEEeccCCccccCCcccc---ccCCCcccCCCcCCCC
Q 009965 208 -----CHLSQLKVADFSYNFFVGSIPKCL---EYLPSTSFQGNCLQNK 247 (521)
Q Consensus 208 -----~~l~~L~~L~ls~N~l~g~ip~~l---~~l~~l~~~~N~l~~~ 247 (521)
..+++|+.|+|++|.+++..+..+ .+|+.+++++|.+...
T Consensus 240 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 287 (477)
T 2id5_A 240 PYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVV 287 (477)
T ss_dssp CHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEE
T ss_pred CHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceE
Confidence 345667777777776665544433 3445566666665553
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.5e-18 Score=172.30 Aligned_cols=166 Identities=19% Similarity=0.139 Sum_probs=86.0
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|+|++|.+++..+ +..+++|++|+|++|++++..+ +++|++|++++|++++..+. .+++|++|+|
T Consensus 58 ~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~~-----~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l 127 (317)
T 3o53_A 58 TKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAANNNISRVSCS---RGQGKKNIYL 127 (317)
T ss_dssp TTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEEE-----CTTCCEEECCSSCCSEEEEC---CCSSCEEEEC
T ss_pred CcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccccC-----CCCcCEEECCCCccCCcCcc---ccCCCCEEEC
Confidence 456777777777766443 6667777777777776664221 13444444444444322221 2345566666
Q ss_pred ccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc---cCCCCCCEEeccCCccccC
Q 009965 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGS 226 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~---~~l~~L~~L~ls~N~l~g~ 226 (521)
++|++++..|..++.+++|++|+|++|.+++..|..... ....+..+++++|.++++ ..+++|+.|++++|++++.
T Consensus 128 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~l~~L~~L~Ls~N~l~~l 206 (317)
T 3o53_A 128 ANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAA-SSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAFM 206 (317)
T ss_dssp CSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGG-GTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCCEE
T ss_pred CCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhh-ccCcCCEEECCCCcCcccccccccccCCEEECCCCcCCcc
Confidence 666666555555556666666666666665433332111 113455555666655443 2245566666666666533
Q ss_pred Ccc--ccccCCCcccCCCcCCC
Q 009965 227 IPK--CLEYLPSTSFQGNCLQN 246 (521)
Q Consensus 227 ip~--~l~~l~~l~~~~N~l~~ 246 (521)
.|. .+.+|+.+++++|.+..
T Consensus 207 ~~~~~~l~~L~~L~L~~N~l~~ 228 (317)
T 3o53_A 207 GPEFQSAAGVTWISLRNNKLVL 228 (317)
T ss_dssp CGGGGGGTTCSEEECTTSCCCE
T ss_pred hhhhcccCcccEEECcCCcccc
Confidence 222 12344455556665543
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.5e-17 Score=166.08 Aligned_cols=169 Identities=19% Similarity=0.247 Sum_probs=135.1
Q ss_pred CCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceee
Q 009965 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
..+++.|+|++|.+++..|..|..+++|++|+|++|+++ .+|..+. ++|++|++++|++++..+..|.++++|++|+
T Consensus 77 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~ 153 (332)
T 2ft3_A 77 LQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIE 153 (332)
T ss_dssp CTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEE
T ss_pred CCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEE
Confidence 357999999999999988999999999999999999998 5676665 8999999999999977777799999999999
Q ss_pred cccccCc--ccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCc-----ccCCCCCCEEeccCC
Q 009965 149 LQSNGLT--GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYN 221 (521)
Q Consensus 149 Ls~N~l~--g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~-----~~~l~~L~~L~ls~N 221 (521)
+++|.++ +..|..+..+ +|++|++++|++++ +|.... ..+..+++++|.+++ +..+++|+.|++++|
T Consensus 154 l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~----~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N 227 (332)
T 2ft3_A 154 MGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP----ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHN 227 (332)
T ss_dssp CCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC----SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSS
T ss_pred CCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc----CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCC
Confidence 9999996 4778888888 89999999999884 665432 356677777777654 345677777777777
Q ss_pred ccccCCcccc---ccCCCcccCCCcCCC
Q 009965 222 FFVGSIPKCL---EYLPSTSFQGNCLQN 246 (521)
Q Consensus 222 ~l~g~ip~~l---~~l~~l~~~~N~l~~ 246 (521)
++++..|..+ .+|+.+++++|.+..
T Consensus 228 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 255 (332)
T 2ft3_A 228 QIRMIENGSLSFLPTLRELHLDNNKLSR 255 (332)
T ss_dssp CCCCCCTTGGGGCTTCCEEECCSSCCCB
T ss_pred cCCcCChhHhhCCCCCCEEECCCCcCee
Confidence 7776655444 345566777776664
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.2e-17 Score=153.86 Aligned_cols=149 Identities=13% Similarity=0.188 Sum_probs=120.6
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|++++|.++. +| .+..+++|++|++++|.++ .+..+..+++|++|+|++|++++..|..+..+++|++|+|
T Consensus 44 ~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 44 NSLTYITLANINVTD-LT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp HTCCEEEEESSCCSC-CT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CCccEEeccCCCccC-hH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 368999999999985 55 6999999999999999776 3457999999999999999999888999999999999999
Q ss_pred ccccCcccCchhhhCCCCCCEEeCCCCC-CCccCCCCCCCcccccccccccccCCcCcccCCCCCCEEeccCCccccCCc
Q 009965 150 QSNGLTGRLPAELGNLISLEELHLDRNR-LQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP 228 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~ip 228 (521)
++|++++..|..++.+++|++|+|++|+ ++ .+|. +..+++|+.|++++|.+++..+
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~~----------------------l~~l~~L~~L~l~~n~i~~~~~ 176 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIMP----------------------LKTLPELKSLNIQFDGVHDYRG 176 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCGG----------------------GGGCSSCCEEECTTBCCCCCTT
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccHh----------------------hcCCCCCCEEECCCCCCcChHH
Confidence 9999998899999999999999999998 54 4441 3345667777777777775321
Q ss_pred -cccccCCCcccCCCcCC
Q 009965 229 -KCLEYLPSTSFQGNCLQ 245 (521)
Q Consensus 229 -~~l~~l~~l~~~~N~l~ 245 (521)
..+.+|+.+++++|++.
T Consensus 177 l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 177 IEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp GGGCSSCCEEEECBC---
T ss_pred hccCCCCCEEEeeCcccC
Confidence 23455666777777554
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.5e-17 Score=164.33 Aligned_cols=165 Identities=21% Similarity=0.353 Sum_probs=107.8
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|+|++|.+++..+ +..+++|++|+|++|.+++ +| .+..+++|++|+|++|++++ +|. +..+++|++|+|
T Consensus 63 ~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l 136 (308)
T 1h6u_A 63 NNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYL 136 (308)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEEC
Confidence 467777777777776433 7777777777777777764 33 57777777777777777774 333 777777777777
Q ss_pred ccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc---cCCCCCCEEeccCCccccC
Q 009965 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGS 226 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~---~~l~~L~~L~ls~N~l~g~ 226 (521)
++|++++..+ +..+++|++|+|++|++++..+ . ....++..+++++|.++++ ..+++|+.|++++|++++.
T Consensus 137 ~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l--~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~N~l~~~ 210 (308)
T 1h6u_A 137 DLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--L--ANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDV 210 (308)
T ss_dssp CSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--G--TTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECTTSCCCBC
T ss_pred CCCccCcCcc--ccCCCCccEEEccCCcCCCChh--h--cCCCCCCEEECCCCccCcChhhcCCCCCCEEEccCCccCcc
Confidence 7777774333 6777777777777777764322 1 1124566677777776653 3466777777777777754
Q ss_pred Cc-cccccCCCcccCCCcCCC
Q 009965 227 IP-KCLEYLPSTSFQGNCLQN 246 (521)
Q Consensus 227 ip-~~l~~l~~l~~~~N~l~~ 246 (521)
.| ..+.+|+.+++++|++.+
T Consensus 211 ~~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 211 SPLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp GGGTTCTTCCEEEEEEEEEEC
T ss_pred ccccCCCCCCEEEccCCeeec
Confidence 43 223455566777776655
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.73 E-value=9.7e-18 Score=179.66 Aligned_cols=178 Identities=20% Similarity=0.131 Sum_probs=141.7
Q ss_pred CCEEEEEecCCCCCccC--CccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCC-cccCCCccCce
Q 009965 70 DRVLKINISGSSLKGFL--APELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP-PEIGNLTGLVK 146 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~--p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~ 146 (521)
.+++.|++++|.+++.. |..+..+++|++|+|++|.+++..+. +..+++|++|++++|.+++..| ..+.++++|++
T Consensus 347 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 425 (570)
T 2z63_A 347 PSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 425 (570)
T ss_dssp TTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCE
T ss_pred CCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCE
Confidence 46788888888887654 66788888899999998888865444 8889999999999999887666 56888899999
Q ss_pred eecccccCcccCchhhhCCCCCCEEeCCCCCCC-ccCCCCCCCcccccccccccccCCcCcc-----cCCCCCCEEeccC
Q 009965 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQ-GAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSY 220 (521)
Q Consensus 147 L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~-g~~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~l~~L~~L~ls~ 220 (521)
|+|++|.+++..|..|.++++|++|+|++|.++ +.+|..... ..++..+++++|.++++ ..+++|+.|++++
T Consensus 426 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~--l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 503 (570)
T 2z63_A 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTE--LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMAS 503 (570)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTT--CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhc--ccCCCEEECCCCccccCChhhhhcccCCCEEeCCC
Confidence 999999999888888899999999999999987 567754322 35778888888888754 4578899999999
Q ss_pred CccccCCcccc---ccCCCcccCCCcCCCCCCc
Q 009965 221 NFFVGSIPKCL---EYLPSTSFQGNCLQNKDPK 250 (521)
Q Consensus 221 N~l~g~ip~~l---~~l~~l~~~~N~l~~~~~~ 250 (521)
|++++..|..+ .+|+.+++++|++.+.++.
T Consensus 504 n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 504 NQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 99987777655 4556678899988887653
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.6e-17 Score=150.13 Aligned_cols=127 Identities=24% Similarity=0.324 Sum_probs=88.1
Q ss_pred CCCccceeeCCC---------CCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccC
Q 009965 57 PCHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGT 127 (521)
Q Consensus 57 ~c~w~gv~C~~~---------~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 127 (521)
.|.|.++.|... ..+++.|+|++|.+++..+..+..+++|++|+|++|++++..+..|..+++|++|+|++
T Consensus 6 ~C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 6 SCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp EEETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EeCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 367888888631 23567777777777765555667777777777777777765556667777777777777
Q ss_pred CcCCCCCCcccCCCccCceeecccccCcccCchhhhCCCCCCEEeCCCCCCCccCC
Q 009965 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183 (521)
Q Consensus 128 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p 183 (521)
|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|.+++..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 77776655566777777777777777775544455667777777777777765443
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.72 E-value=6.6e-17 Score=159.61 Aligned_cols=167 Identities=23% Similarity=0.343 Sum_probs=139.9
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|++++|.++. +| .+..+++|++|+|++|.+++..+ +..+++|++|+|++|++++ +| .+..+++|++|+|
T Consensus 41 ~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l 114 (308)
T 1h6u_A 41 DGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDL 114 (308)
T ss_dssp HTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEEC
T ss_pred CCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEEC
Confidence 378999999999987 44 68999999999999999996544 9999999999999999985 44 7999999999999
Q ss_pred ccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc---cCCCCCCEEeccCCccccC
Q 009965 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGS 226 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~---~~l~~L~~L~ls~N~l~g~ 226 (521)
++|++++ +|. +..+++|++|++++|++++..+ .....++..+++++|.++++ ..+++|+.|++++|++++.
T Consensus 115 ~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~----l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~ 188 (308)
T 1h6u_A 115 TSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP----LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDI 188 (308)
T ss_dssp TTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG----GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCC
T ss_pred CCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc----ccCCCCccEEEccCCcCCCChhhcCCCCCCEEECCCCccCcC
Confidence 9999995 554 9999999999999999985443 11235788899999998764 5678999999999999865
Q ss_pred Cc-cccccCCCcccCCCcCCCCC
Q 009965 227 IP-KCLEYLPSTSFQGNCLQNKD 248 (521)
Q Consensus 227 ip-~~l~~l~~l~~~~N~l~~~~ 248 (521)
.| ..+.+|+.+++++|.+.+..
T Consensus 189 ~~l~~l~~L~~L~L~~N~l~~~~ 211 (308)
T 1h6u_A 189 SPLASLPNLIEVHLKNNQISDVS 211 (308)
T ss_dssp GGGGGCTTCCEEECTTSCCCBCG
T ss_pred hhhcCCCCCCEEEccCCccCccc
Confidence 44 34567788999999887653
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.71 E-value=7e-17 Score=181.15 Aligned_cols=172 Identities=22% Similarity=0.199 Sum_probs=148.8
Q ss_pred EEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCC-CcccCCCccCceeeccc
Q 009965 73 LKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI-PPEIGNLTGLVKINLQS 151 (521)
Q Consensus 73 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~-p~~~~~l~~L~~L~Ls~ 151 (521)
...|.++++++. +|. ..++|++|+|++|.+++..|..|.++++|++|||++|.+.+.+ |..|.++++|++|+|++
T Consensus 7 ~~~dcs~~~L~~-vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~ 82 (844)
T 3j0a_A 7 RIAFYRFCNLTQ-VPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGS 82 (844)
T ss_dssp EEEEESCCCSSC-CCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTT
T ss_pred eEEEccCCCCCC-CCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCC
Confidence 457788899987 554 5689999999999999999999999999999999999777676 78899999999999999
Q ss_pred ccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCc------ccCCCCCCEEeccCCcccc
Q 009965 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG------LCHLSQLKVADFSYNFFVG 225 (521)
Q Consensus 152 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~------~~~l~~L~~L~ls~N~l~g 225 (521)
|.+++..|..|+++++|++|+|++|.+++.+|.........++..+++++|.+++ +..+++|+.|++++|.+++
T Consensus 83 N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~ 162 (844)
T 3j0a_A 83 SKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFL 162 (844)
T ss_dssp CCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCC
T ss_pred CcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCe
Confidence 9999999999999999999999999999877764322234688999999998865 4568999999999999998
Q ss_pred CCcccc-----ccCCCcccCCCcCCCCC
Q 009965 226 SIPKCL-----EYLPSTSFQGNCLQNKD 248 (521)
Q Consensus 226 ~ip~~l-----~~l~~l~~~~N~l~~~~ 248 (521)
..|..+ .+|..+++++|.+....
T Consensus 163 ~~~~~l~~l~~~~L~~L~L~~n~l~~~~ 190 (844)
T 3j0a_A 163 VCEHELEPLQGKTLSFFSLAANSLYSRV 190 (844)
T ss_dssp CCSGGGHHHHHCSSCCCEECCSBSCCCC
T ss_pred eCHHHcccccCCccceEECCCCcccccc
Confidence 888776 46788999999887644
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.8e-17 Score=176.14 Aligned_cols=172 Identities=20% Similarity=0.180 Sum_probs=138.9
Q ss_pred CCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceee
Q 009965 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
..+++.|+|++|.+++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+
T Consensus 27 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp CSSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred cccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 35799999999999998888999999999999999999988889999999999999999999988889999999999999
Q ss_pred cccccCcccCchhhhCCCCCCEEeCCCCCCCc-cCCCCCCCcccccccccccccCCcCcc-----cCCCCC----CEEec
Q 009965 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQG-AVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQL----KVADF 218 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~l~~L----~~L~l 218 (521)
|++|++++..+..|+++++|++|+|++|.+++ .+|..... ..+++.+++++|.++++ ..+++| ..+++
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~--l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l 184 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSN--LTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDL 184 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGG--CTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEEC
T ss_pred ccccccccCCCccccccccccEEecCCCccceecChhhhcc--cCCCCEEeCcCCccceecHHHccchhccchhhhhccc
Confidence 99999996655579999999999999999986 35653221 24566777777776543 234455 67777
Q ss_pred cCCccccCCccccc--cCCCcccCCC
Q 009965 219 SYNFFVGSIPKCLE--YLPSTSFQGN 242 (521)
Q Consensus 219 s~N~l~g~ip~~l~--~l~~l~~~~N 242 (521)
++|.+++..|..+. +++.+++.+|
T Consensus 185 ~~n~l~~~~~~~~~~~~L~~L~l~~n 210 (570)
T 2z63_A 185 SLNPMNFIQPGAFKEIRLHKLTLRNN 210 (570)
T ss_dssp TTCCCCEECTTTTTTCEEEEEEEESC
T ss_pred CCCCceecCHHHhccCcceeEecccc
Confidence 77777766665553 3455666665
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.70 E-value=1.6e-17 Score=148.67 Aligned_cols=138 Identities=22% Similarity=0.175 Sum_probs=109.8
Q ss_pred CCEEEEEecCCCCC-ccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceee
Q 009965 70 DRVLKINISGSSLK-GFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 70 ~~l~~L~L~~n~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
.+++.|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 46888999999998 67888888899999999999998865 6788899999999999999877888888899999999
Q ss_pred cccccCcccC-chhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcccCCCCCCEEeccCCccccCC
Q 009965 149 LQSNGLTGRL-PAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSI 227 (521)
Q Consensus 149 Ls~N~l~g~~-p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~i 227 (521)
|++|++++.. +..+..+++|++|++++|.+++..+.. ...+..+++|+.|++++|.+. .+
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~------------------~~~~~~l~~L~~L~l~~n~~~-~~ 162 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYR------------------ESVFKLLPQLTYLDGYDREDQ-EA 162 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHH------------------HHHHTTCSSCCEETTEETTSC-BC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHH------------------HHHHHhCccCcEecCCCCChh-hc
Confidence 9999998532 278888999999999999888432200 002345678889999888876 44
Q ss_pred c
Q 009965 228 P 228 (521)
Q Consensus 228 p 228 (521)
|
T Consensus 163 ~ 163 (168)
T 2ell_A 163 P 163 (168)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.1e-17 Score=178.68 Aligned_cols=175 Identities=19% Similarity=0.196 Sum_probs=142.2
Q ss_pred CCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCC-CCCcccCCCccCcee
Q 009965 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG-PIPPEIGNLTGLVKI 147 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L 147 (521)
-.++++|+|++|.+++..|..|..+++|++|+|++|++++..|..|+.+++|++|+|++|++++ .+|..++++++|++|
T Consensus 49 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 128 (549)
T 2z81_A 49 CANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTL 128 (549)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred CCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEE
Confidence 3589999999999999888999999999999999999998888889999999999999999986 467899999999999
Q ss_pred ecccccCcccCc-hhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc-----cCCCCCCEEeccCC
Q 009965 148 NLQSNGLTGRLP-AELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYN 221 (521)
Q Consensus 148 ~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~l~~L~~L~ls~N 221 (521)
+|++|.+.+.+| ..|.++++|++|++++|++++.+|..... ..++..++++.|.+..+ ..+++|++|++++|
T Consensus 129 ~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~--l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n 206 (549)
T 2z81_A 129 RIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKS--IRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDT 206 (549)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTT--CSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESC
T ss_pred ECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhc--cccCceEecccCcccccchhhHhhcccccEEEccCC
Confidence 999999655665 68999999999999999999888875433 24667777777766543 24678888888888
Q ss_pred ccccCC------ccccccCCCcccCCCcCC
Q 009965 222 FFVGSI------PKCLEYLPSTSFQGNCLQ 245 (521)
Q Consensus 222 ~l~g~i------p~~l~~l~~l~~~~N~l~ 245 (521)
++++.. .....+++.+++.+|.+.
T Consensus 207 ~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~ 236 (549)
T 2z81_A 207 NLARFQFSPLPVDEVSSPMKKLAFRGSVLT 236 (549)
T ss_dssp BCTTCCCCCCSSCCCCCCCCEEEEESCEEE
T ss_pred ccccccccccchhhhhhcccceeccccccc
Confidence 887631 122455566666666543
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.1e-16 Score=161.79 Aligned_cols=152 Identities=22% Similarity=0.123 Sum_probs=130.1
Q ss_pred EEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCcccc-CCCCCcEEEccCCcCCCCCCcccCCCccCceeeccc
Q 009965 73 LKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELG-LLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151 (521)
Q Consensus 73 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 151 (521)
..+++++++|+. +|..+. ..++.|+|++|+|++..+..|. .+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 368999999987 666554 5689999999999988888887 999999999999999988888999999999999999
Q ss_pred ccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcccCCCCCCEEeccCCccccCCccc-
Q 009965 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKC- 230 (521)
Q Consensus 152 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~ip~~- 230 (521)
|+|++..+..|.++++|++|+|++|++++..|. .+..+++|+.|+|++|+|++..+..
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~---------------------~~~~l~~L~~L~L~~N~l~~l~~~~~ 156 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRN---------------------AFEDMAQLQKLYLSQNQISRFPVELI 156 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTT---------------------TTTTCTTCCEEECCSSCCCSCCGGGT
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHH---------------------HhCCcccCCEEECCCCcCCeeCHHHh
Confidence 999987778899999999999999999855443 2445788999999999999543333
Q ss_pred -----cccCCCcccCCCcCCCCC
Q 009965 231 -----LEYLPSTSFQGNCLQNKD 248 (521)
Q Consensus 231 -----l~~l~~l~~~~N~l~~~~ 248 (521)
+.+|..|++++|.++...
T Consensus 157 ~~~~~l~~L~~L~L~~N~l~~l~ 179 (361)
T 2xot_A 157 KDGNKLPKLMLLDLSSNKLKKLP 179 (361)
T ss_dssp C----CTTCCEEECCSSCCCCCC
T ss_pred cCcccCCcCCEEECCCCCCCccC
Confidence 466788999999998765
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.9e-16 Score=145.20 Aligned_cols=128 Identities=30% Similarity=0.400 Sum_probs=111.2
Q ss_pred EEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeeccccc
Q 009965 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNG 153 (521)
Q Consensus 74 ~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 153 (521)
.+++++|.++. +|..+. ++|++|+|++|+|+ .+|..|..+++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 14 ~l~~~~~~l~~-ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLKV-LPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCSS-CCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCCc-CCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 57788888875 666553 68999999999998 688999999999999999999998888899999999999999999
Q ss_pred CcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcccCCCCCCEEeccCCccccC
Q 009965 154 LTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGS 226 (521)
Q Consensus 154 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~ 226 (521)
+++..|..|..+++|++|+|++|+++ .+|.. .+..+++|+.|++++|.+...
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~-~~~~~--------------------~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDIS-VVPEG--------------------AFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCC-BCCTT--------------------TTTTCTTCCEEECCSSCEECS
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCC-eeChh--------------------hhhcCccccEEEeCCCCeecC
Confidence 99888889999999999999999999 45542 234577899999999998743
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.69 E-value=4.1e-17 Score=164.12 Aligned_cols=191 Identities=12% Similarity=0.131 Sum_probs=148.4
Q ss_pred CCccceeeCC---------CCCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCC-ccccCCCCCcE-EEcc
Q 009965 58 CHWTGIACSD---------ARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIP-KELGLLKRLKI-LDLG 126 (521)
Q Consensus 58 c~w~gv~C~~---------~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~Ls 126 (521)
|.|..|.|+. ...+++.|+|++|+|+...+..|.++++|++|+|++|++.+.+| ..|.++++|+. ++++
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 6788899963 12468999999999998666789999999999999999877665 46889988775 6777
Q ss_pred CCcCCCCCCcccCCCccCceeecccccCcccCchhhhCCCCCCEEeCCC-CCCCccCCCCCCCcccccccccccccCCcC
Q 009965 127 TNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDR-NRLQGAVPAGSNSGYTANIHGMYASSANLT 205 (521)
Q Consensus 127 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~ 205 (521)
.|+++...|..|.++++|++|++++|++++..+..+....++..|++.+ |++. .+|...+......+..+++++|.++
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~-~l~~~~f~~~~~~l~~L~L~~N~i~ 167 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIH-TIERNSFVGLSFESVILWLNKNGIQ 167 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCC-EECTTSSTTSBSSCEEEECCSSCCC
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccc-cccccchhhcchhhhhhcccccccc
Confidence 8999988888999999999999999999977776777778888888866 4555 6666555544456777888898887
Q ss_pred ccc----CCCCCCEEeccCCccccCCcc-c---cccCCCcccCCCcCCCCCC
Q 009965 206 GLC----HLSQLKVADFSYNFFVGSIPK-C---LEYLPSTSFQGNCLQNKDP 249 (521)
Q Consensus 206 ~~~----~l~~L~~L~ls~N~l~g~ip~-~---l~~l~~l~~~~N~l~~~~~ 249 (521)
.+. ...+|+.+++++|+..+.+|. . +.+|+.+++++|.++...+
T Consensus 168 ~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~ 219 (350)
T 4ay9_X 168 EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPS 219 (350)
T ss_dssp EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCS
T ss_pred CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccCh
Confidence 653 345788888876444446664 2 4667788899998887643
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=7.9e-17 Score=174.47 Aligned_cols=169 Identities=16% Similarity=0.096 Sum_probs=137.8
Q ss_pred EEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecccccC
Q 009965 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGL 154 (521)
Q Consensus 75 L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 154 (521)
.+-++.+|+. +|+.+. +++++|||++|+|++..|.+|.++++|++|||++|+|++..|..|.++++|++|+|++|+|
T Consensus 36 ~~c~~~~l~~-vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l 112 (635)
T 4g8a_A 36 YQCMELNFYK-IPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 112 (635)
T ss_dssp EECTTSCCSS-CCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EECCCCCcCc-cCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcC
Confidence 4556667765 666552 5899999999999988888999999999999999999988788999999999999999999
Q ss_pred cccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCc------ccCCCCCCEEeccCCccccCCc
Q 009965 155 TGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG------LCHLSQLKVADFSYNFFVGSIP 228 (521)
Q Consensus 155 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~------~~~l~~L~~L~ls~N~l~g~ip 228 (521)
++..|..|.++++|++|+|++|++++ +|...+.. ..+++.+++++|.++. +..+++|++|++++|++++..|
T Consensus 113 ~~l~~~~f~~L~~L~~L~Ls~N~l~~-l~~~~~~~-L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 190 (635)
T 4g8a_A 113 QSLALGAFSGLSSLQKLVAVETNLAS-LENFPIGH-LKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 190 (635)
T ss_dssp CEECGGGGTTCTTCCEEECTTSCCCC-STTCCCTT-CTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred CCCCHHHhcCCCCCCEEECCCCcCCC-CChhhhhc-CcccCeeccccCccccCCCchhhccchhhhhhcccCcccccccc
Confidence 97777889999999999999999995 55432221 3578889999998865 3458999999999999998888
Q ss_pred cccccCC-------CcccCCCcCCCCC
Q 009965 229 KCLEYLP-------STSFQGNCLQNKD 248 (521)
Q Consensus 229 ~~l~~l~-------~l~~~~N~l~~~~ 248 (521)
..+..+. .++++.|.+....
T Consensus 191 ~~l~~L~~l~~~~~~~~ls~n~l~~i~ 217 (635)
T 4g8a_A 191 TDLRVLHQMPLLNLSLDLSLNPMNFIQ 217 (635)
T ss_dssp GGGHHHHTCTTCCCEEECTTCCCCEEC
T ss_pred ccccchhhhhhhhhhhhcccCcccccC
Confidence 7765443 2456677665543
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.69 E-value=1.3e-16 Score=156.28 Aligned_cols=164 Identities=23% Similarity=0.330 Sum_probs=123.0
Q ss_pred CEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecc
Q 009965 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
+++.|++++|.++.. +.+..+++|++|+|++|++++..| +..+++|++|+|++|++++ +| .+..+++|++|+|+
T Consensus 47 ~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~ 120 (291)
T 1h6t_A 47 SIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLE 120 (291)
T ss_dssp TCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECT
T ss_pred cccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECC
Confidence 678888888888764 347888888888888888886544 8888888888888888875 33 48888888888888
Q ss_pred cccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc---cCCCCCCEEeccCCccccCC
Q 009965 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGSI 227 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~---~~l~~L~~L~ls~N~l~g~i 227 (521)
+|++++ + +.+..+++|++|++++|++++. +. .....++..+++++|.++++ ..+++|+.|++++|.+++ +
T Consensus 121 ~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~-~~---l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~L~~N~i~~-l 193 (291)
T 1h6t_A 121 HNGISD-I-NGLVHLPQLESLYLGNNKITDI-TV---LSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD-L 193 (291)
T ss_dssp TSCCCC-C-GGGGGCTTCCEEECCSSCCCCC-GG---GGGCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCB-C
T ss_pred CCcCCC-C-hhhcCCCCCCEEEccCCcCCcc-hh---hccCCCCCEEEccCCccccchhhcCCCccCEEECCCCcCCC-C
Confidence 888885 3 4678888888888888888743 21 11224677788888877654 457889999999998884 4
Q ss_pred cc--ccccCCCcccCCCcCCCC
Q 009965 228 PK--CLEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 228 p~--~l~~l~~l~~~~N~l~~~ 247 (521)
|. .+.+|..+++++|++...
T Consensus 194 ~~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 194 RALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp GGGTTCTTCSEEEEEEEEEECC
T ss_pred hhhccCCCCCEEECcCCcccCC
Confidence 53 245566778888876653
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.69 E-value=6.9e-17 Score=171.22 Aligned_cols=155 Identities=23% Similarity=0.253 Sum_probs=136.8
Q ss_pred CCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccc--cCCccccCCCCCcEEEccCCcCCCCCCcc-cCCCccCc
Q 009965 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIG--IIPKELGLLKRLKILDLGTNQLTGPIPPE-IGNLTGLV 145 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~ 145 (521)
..+++.|+|++|.+++.+|..++.+++|++|+|++|++++ .+|..+..+++|++|+|++|++++.+|.. +..+++|+
T Consensus 323 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~ 402 (520)
T 2z7x_B 323 ISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402 (520)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCC
T ss_pred CCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCC
Confidence 4689999999999999999999999999999999999997 56788999999999999999999867765 88999999
Q ss_pred eeecccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc-----cCCCCCCEEeccC
Q 009965 146 KINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSY 220 (521)
Q Consensus 146 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~l~~L~~L~ls~ 220 (521)
+|+|++|++++.+|..+. ++|++|+|++|+++ .+|.... ....+..+++++|+++.+ ..+++|+.|++++
T Consensus 403 ~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~--~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~ 477 (520)
T 2z7x_B 403 SLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVV--KLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHT 477 (520)
T ss_dssp EEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGG--GCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhh--cCCCCCEEECCCCcCCccCHHHhccCCcccEEECcC
Confidence 999999999988887765 79999999999999 7887543 235788999999998764 4578999999999
Q ss_pred CccccCCc
Q 009965 221 NFFVGSIP 228 (521)
Q Consensus 221 N~l~g~ip 228 (521)
|.+++..+
T Consensus 478 N~~~c~c~ 485 (520)
T 2z7x_B 478 NPWDCSCP 485 (520)
T ss_dssp SCBCCCHH
T ss_pred CCCcccCC
Confidence 99997655
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.69 E-value=2.9e-16 Score=141.79 Aligned_cols=133 Identities=26% Similarity=0.288 Sum_probs=114.3
Q ss_pred EEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeeccc
Q 009965 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151 (521)
Q Consensus 72 l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 151 (521)
.+.+++++|+++. +|..+ .++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++
T Consensus 9 ~~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 3579999999987 45443 47999999999999987777889999999999999999977777789999999999999
Q ss_pred ccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcccCCCCCCEEeccCCccccCCc
Q 009965 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP 228 (521)
Q Consensus 152 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~ip 228 (521)
|++++..+..|..+++|++|+|++|+++ .+|... +..+++|+.|++++|.+++..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~--------------------~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLK-SVPDGI--------------------FDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTT--------------------TTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcce-EeCHHH--------------------hcCCcccCEEEecCCCeeccCc
Confidence 9999877778899999999999999998 455421 3356789999999999997765
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.1e-16 Score=171.56 Aligned_cols=155 Identities=21% Similarity=0.233 Sum_probs=136.2
Q ss_pred CCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccc--cCCccccCCCCCcEEEccCCcCCCCCCc-ccCCCccCc
Q 009965 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIG--IIPKELGLLKRLKILDLGTNQLTGPIPP-EIGNLTGLV 145 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~ 145 (521)
..+++.|+|++|.+++.+|..+..+++|++|+|++|++++ .+|..+..+++|++|+|++|++++.+|. .+..+++|+
T Consensus 352 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~ 431 (562)
T 3a79_B 352 PSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESIL 431 (562)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCC
T ss_pred CCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCC
Confidence 5689999999999999999999999999999999999997 3457799999999999999999985665 488999999
Q ss_pred eeecccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc-----cCCCCCCEEeccC
Q 009965 146 KINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSY 220 (521)
Q Consensus 146 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~l~~L~~L~ls~ 220 (521)
+|+|++|++++.+|..+. ++|++|+|++|+++ .+|..... ...+..+++++|+++.+ ..+++|+.|++++
T Consensus 432 ~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~--l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~ 506 (562)
T 3a79_B 432 VLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTH--LQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHD 506 (562)
T ss_dssp EEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTS--SCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCS
T ss_pred EEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcC--CCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecC
Confidence 999999999988877654 79999999999999 78876552 35788999999999864 4578999999999
Q ss_pred CccccCCc
Q 009965 221 NFFVGSIP 228 (521)
Q Consensus 221 N~l~g~ip 228 (521)
|.+.+..|
T Consensus 507 N~~~c~c~ 514 (562)
T 3a79_B 507 NPWDCTCP 514 (562)
T ss_dssp CCBCCCHH
T ss_pred CCcCCCcc
Confidence 99998766
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.68 E-value=2.5e-17 Score=144.33 Aligned_cols=131 Identities=22% Similarity=0.178 Sum_probs=112.0
Q ss_pred CCEEEEEecCCCCC-ccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceee
Q 009965 70 DRVLKINISGSSLK-GFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 70 ~~l~~L~L~~n~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
.+++.|++++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 46899999999999 78999999999999999999999976 7799999999999999999988999888899999999
Q ss_pred cccccCccc-CchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcccCCCCCCEEeccC
Q 009965 149 LQSNGLTGR-LPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSY 220 (521)
Q Consensus 149 Ls~N~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~ 220 (521)
|++|++++. .|..+..+++|++|++++|.+++..+... ..+..+++|+.||+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~------------------~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRE------------------NVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHH------------------HHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHH------------------HHHHHCCCcccccCCC
Confidence 999999963 45889999999999999999985432000 0234567888888864
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.68 E-value=2.5e-16 Score=167.48 Aligned_cols=155 Identities=27% Similarity=0.269 Sum_probs=123.9
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|+|++|.|+. +| ..+++|++|+|++|+|++ +|. +.. +|++|+|++|+|++ +|. .+++|+.|+|
T Consensus 80 ~~L~~L~Ls~N~l~~-ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 147 (571)
T 3cvr_A 80 PQITVLEITQNALIS-LP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINA 147 (571)
T ss_dssp TTCSEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred CCCCEEECcCCCCcc-cc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeC
Confidence 478999999999984 66 567899999999999997 776 665 89999999999996 676 6889999999
Q ss_pred ccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcccCCC-CC-------CEEeccCC
Q 009965 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLS-QL-------KVADFSYN 221 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~-~L-------~~L~ls~N 221 (521)
++|+|++ +|. .+++|++|+|++|+|++ +|. .. .++..+++++|.++.+..+. +| +.|+|++|
T Consensus 148 s~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~----~~L~~L~Ls~N~L~~lp~~~~~L~~~~~~L~~L~Ls~N 217 (571)
T 3cvr_A 148 DNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP----ESLEALDVSTNLLESLPAVPVRNHHSEETEIFFRCREN 217 (571)
T ss_dssp CSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC----TTCCEEECCSSCCSSCCCCC--------CCEEEECCSS
T ss_pred CCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh----CCCCEEECcCCCCCchhhHHHhhhcccccceEEecCCC
Confidence 9999995 776 67899999999999986 776 22 67888899999888654422 56 88999999
Q ss_pred ccccCCccccc---cCCCcccCCCcCCCC
Q 009965 222 FFVGSIPKCLE---YLPSTSFQGNCLQNK 247 (521)
Q Consensus 222 ~l~g~ip~~l~---~l~~l~~~~N~l~~~ 247 (521)
+|+ .+|..+. +|..+++++|++++.
T Consensus 218 ~l~-~lp~~l~~l~~L~~L~L~~N~l~~~ 245 (571)
T 3cvr_A 218 RIT-HIPENILSLDPTCTIILEDNPLSSR 245 (571)
T ss_dssp CCC-CCCGGGGGSCTTEEEECCSSSCCHH
T ss_pred cce-ecCHHHhcCCCCCEEEeeCCcCCCc
Confidence 998 6787654 455678899988764
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.68 E-value=5.1e-16 Score=161.71 Aligned_cols=162 Identities=22% Similarity=0.182 Sum_probs=83.4
Q ss_pred CEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecc
Q 009965 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
+++.|+|++|.+++. | .++.+++|++|+|++|++++. | ++.+++|++|+|++|++++. | ++++++|++|+|+
T Consensus 43 ~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~ 114 (457)
T 3bz5_A 43 TLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCD 114 (457)
T ss_dssp TCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECC
T ss_pred CCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECC
Confidence 445555555555542 2 355555555555555555542 2 45555555555555555532 2 4455555555555
Q ss_pred cccCcccCchhhhCCCCCCEEeCCCCCCCc---------------------cCCCCCCCcccccccccccccCCcCcc--
Q 009965 151 SNGLTGRLPAELGNLISLEELHLDRNRLQG---------------------AVPAGSNSGYTANIHGMYASSANLTGL-- 207 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g---------------------~~p~~~~~~~~~~l~~l~l~~n~l~~~-- 207 (521)
+|++++ +| ++.+++|++|++++|++++ .++.. ....+..++++.|+++++
T Consensus 115 ~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l~l~~l~~L~~L~l~~n~~~~~~~~~----~l~~L~~L~ls~n~l~~l~l 187 (457)
T 3bz5_A 115 TNKLTK-LD--VSQNPLLTYLNCARNTLTEIDVSHNTQLTELDCHLNKKITKLDVT----PQTQLTTLDCSFNKITELDV 187 (457)
T ss_dssp SSCCSC-CC--CTTCTTCCEEECTTSCCSCCCCTTCTTCCEEECTTCSCCCCCCCT----TCTTCCEEECCSSCCCCCCC
T ss_pred CCcCCe-ec--CCCCCcCCEEECCCCccceeccccCCcCCEEECCCCCcccccccc----cCCcCCEEECCCCccceecc
Confidence 555553 22 4455555555555555543 33211 113455566666666552
Q ss_pred cCCCCCCEEeccCCccccCCccccccCCCcccCCCcCCCC
Q 009965 208 CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 208 ~~l~~L~~L~ls~N~l~g~ip~~l~~l~~l~~~~N~l~~~ 247 (521)
..+++|+.|++++|++++.--..+.+|+.+++++|++++.
T Consensus 188 ~~l~~L~~L~l~~N~l~~~~l~~l~~L~~L~Ls~N~l~~i 227 (457)
T 3bz5_A 188 SQNKLLNRLNCDTNNITKLDLNQNIQLTFLDCSSNKLTEI 227 (457)
T ss_dssp TTCTTCCEEECCSSCCSCCCCTTCTTCSEEECCSSCCSCC
T ss_pred ccCCCCCEEECcCCcCCeeccccCCCCCEEECcCCccccc
Confidence 3455666666666666654223345556666777766664
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.6e-16 Score=145.79 Aligned_cols=122 Identities=21% Similarity=0.278 Sum_probs=109.8
Q ss_pred CCccceeeCC---------CCCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCC
Q 009965 58 CHWTGIACSD---------ARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTN 128 (521)
Q Consensus 58 c~w~gv~C~~---------~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 128 (521)
|.|..+.|.. ....++.|+|++|.|+. +|..|..+++|++|+|++|+|++..|..|..+++|++|+|++|
T Consensus 10 C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~~-ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 10 CLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCCS-CCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred eCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCch-hHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 5677777763 13478999999999984 7789999999999999999999988889999999999999999
Q ss_pred cCCCCCCcccCCCccCceeecccccCcccCchhhhCCCCCCEEeCCCCCCCc
Q 009965 129 QLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180 (521)
Q Consensus 129 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 180 (521)
+|++..|..|.++++|++|+|++|++++..+..|..+++|+.|+|++|.+..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 9998888899999999999999999997666679999999999999999873
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=99.68 E-value=2.2e-16 Score=165.07 Aligned_cols=143 Identities=29% Similarity=0.417 Sum_probs=70.8
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|++++|.+++..| ++.+++|++|++++|++++. ..+..+++|++|++++|.+++..| +..+++|+.|+|
T Consensus 199 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l 272 (466)
T 1o6v_A 199 TNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKL 272 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEEC
T ss_pred CCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEEC
Confidence 356666666666655433 45555556666655555532 235555555555555555554333 555555555555
Q ss_pred ccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc---cCCCCCCEEeccCCccc
Q 009965 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFV 224 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~---~~l~~L~~L~ls~N~l~ 224 (521)
++|.+++..| +..+++|+.|+|++|++++..|- ....++..+++++|.+++. ..+++|+.|++++|+++
T Consensus 273 ~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~----~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~ 344 (466)
T 1o6v_A 273 GANQISNISP--LAGLTALTNLELNENQLEDISPI----SNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVS 344 (466)
T ss_dssp CSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGGG----GGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCC
T ss_pred CCCccCcccc--ccCCCccCeEEcCCCcccCchhh----cCCCCCCEEECcCCcCCCchhhccCccCCEeECCCCccC
Confidence 5555553222 45555555555555555533221 0112344444444444432 23444444444444444
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=99.67 E-value=1.1e-15 Score=159.05 Aligned_cols=158 Identities=27% Similarity=0.323 Sum_probs=101.8
Q ss_pred CEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecc
Q 009965 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
+++.|++++|.+++ +|. ..++|++|+|++|++++ +| +|+.+++|++|++++|++++ +|..+ .+|++|+++
T Consensus 112 ~L~~L~l~~n~l~~-l~~---~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~ 181 (454)
T 1jl5_A 112 SLKSLLVDNNNLKA-LSD---LPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAG 181 (454)
T ss_dssp TCCEEECCSSCCSC-CCS---CCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECC
T ss_pred CCcEEECCCCccCc-ccC---CCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECc
Confidence 44444444444443 111 11567777777777775 56 47777777777777777774 55443 477777777
Q ss_pred cccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCc---ccCCCCCCEEeccCCccccCC
Q 009965 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGSI 227 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~---~~~l~~L~~L~ls~N~l~g~i 227 (521)
+|++++ +| .++++++|++|++++|++++ +|... ..+..+++++|.++. +..+++|+.|++++|++++ +
T Consensus 182 ~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~-----~~L~~L~l~~n~l~~lp~~~~l~~L~~L~l~~N~l~~-l 252 (454)
T 1jl5_A 182 NNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP-----LSLESIVAGNNILEELPELQNLPFLTTIYADNNLLKT-L 252 (454)
T ss_dssp SSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC-----TTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSS-C
T ss_pred CCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc-----CcccEEECcCCcCCcccccCCCCCCCEEECCCCcCCc-c
Confidence 777775 55 57777888888888887774 44322 256666777776654 3346677777777777774 5
Q ss_pred ccccccCCCcccCCCcCCCC
Q 009965 228 PKCLEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 228 p~~l~~l~~l~~~~N~l~~~ 247 (521)
|..+.+++.+++++|.+...
T Consensus 253 ~~~~~~L~~L~l~~N~l~~l 272 (454)
T 1jl5_A 253 PDLPPSLEALNVRDNYLTDL 272 (454)
T ss_dssp CSCCTTCCEEECCSSCCSCC
T ss_pred cccccccCEEECCCCccccc
Confidence 65566777777777766653
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=99.66 E-value=4e-16 Score=156.42 Aligned_cols=169 Identities=24% Similarity=0.286 Sum_probs=129.2
Q ss_pred CCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceee
Q 009965 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
..+++.|++++|.+.+..+ +..+++|++|++++|.+.+..+ +..+++|++|++++|.+++..+ +..+++|++|+
T Consensus 154 l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~ 227 (347)
T 4fmz_A 154 MTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLK 227 (347)
T ss_dssp CTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEE
T ss_pred CCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEE
Confidence 3578899999999887544 8889999999999999885433 7888899999999998885444 78888899999
Q ss_pred cccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCc---ccCCCCCCEEeccCCcccc
Q 009965 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVG 225 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~---~~~l~~L~~L~ls~N~l~g 225 (521)
|++|++++ +|. +..+++|++|++++|.+++ ++.. ....++..+++++|.+++ +..+++|+.|++++|.+++
T Consensus 228 l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~-~~~~---~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~~n~l~~ 301 (347)
T 4fmz_A 228 IGNNKITD-LSP-LANLSQLTWLEIGTNQISD-INAV---KDLTKLKMLNVGSNQISDISVLNNLSQLNSLFLNNNQLGN 301 (347)
T ss_dssp CCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CGGG---TTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCG
T ss_pred ccCCccCC-Ccc-hhcCCCCCEEECCCCccCC-ChhH---hcCCCcCEEEccCCccCCChhhcCCCCCCEEECcCCcCCC
Confidence 99998885 443 8888899999999988874 3321 112467778888888775 4457888888888888887
Q ss_pred CCcccc---ccCCCcccCCCcCCCCCC
Q 009965 226 SIPKCL---EYLPSTSFQGNCLQNKDP 249 (521)
Q Consensus 226 ~ip~~l---~~l~~l~~~~N~l~~~~~ 249 (521)
..|..+ .+|+.+++++|++.+..+
T Consensus 302 ~~~~~l~~l~~L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 302 EDMEVIGGLTNLTTLFLSQNHITDIRP 328 (347)
T ss_dssp GGHHHHHTCTTCSEEECCSSSCCCCGG
T ss_pred cChhHhhccccCCEEEccCCccccccC
Confidence 777654 456667888888777543
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.2e-16 Score=171.96 Aligned_cols=175 Identities=28% Similarity=0.335 Sum_probs=96.4
Q ss_pred CCCCCCCCCCCCCcccee--------eCCCCCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCC
Q 009965 47 LSNWNALDADPCHWTGIA--------CSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLK 118 (521)
Q Consensus 47 l~~W~~~~~~~c~w~gv~--------C~~~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 118 (521)
..+|.. +.+||.|.|.. |. ...++.|++++|.|+ .+|..+. ++|++|+|++|+|+ .+|. .++
T Consensus 12 w~~W~~-~~~~~~~~~r~~~~~~~~~c~--~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~ 81 (622)
T 3g06_A 12 WSAWRR-AAPAEESRGRAAVVQKMRACL--NNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPP 81 (622)
T ss_dssp HHHHHH-TCCGGGHHHHHHHHHHHHHHH--HHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCT
T ss_pred HHHHHh-cCCcchhccccccCccccccc--CCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCC
Confidence 345643 34578886632 32 234667777777776 3555554 67777777777776 3444 456
Q ss_pred CCcEEEccCCcCCCCCCcccCCCccCceeecccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccc
Q 009965 119 RLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMY 198 (521)
Q Consensus 119 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~ 198 (521)
+|++|+|++|+|+ .+|. .+++|++|+|++|++++ +|. .+++|+.|++++|+++ .+|... .++..++
T Consensus 82 ~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~-~lp~~l-----~~L~~L~ 147 (622)
T 3g06_A 82 ELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLT-SLPVLP-----PGLQELS 147 (622)
T ss_dssp TCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCS-CCCCCC-----TTCCEEE
T ss_pred CCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCC-cCCCCC-----CCCCEEE
Confidence 7777777777776 3554 55666666666666663 443 4455666666666555 244321 2344444
Q ss_pred cccCCcCcc--------------------cC-CCCCCEEeccCCccccCCccccccCCCcccCCCcCCC
Q 009965 199 ASSANLTGL--------------------CH-LSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQN 246 (521)
Q Consensus 199 l~~n~l~~~--------------------~~-l~~L~~L~ls~N~l~g~ip~~l~~l~~l~~~~N~l~~ 246 (521)
+++|.++++ .. +++|+.|++++|.+++ +|..+.+|..+++++|.++.
T Consensus 148 Ls~N~l~~l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~ 215 (622)
T 3g06_A 148 VSDNQLASLPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLAS-LPTLPSELYKLWAYNNRLTS 215 (622)
T ss_dssp CCSSCCSCCCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSS
T ss_pred CcCCcCCCcCCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCC-CCCccchhhEEECcCCcccc
Confidence 444444433 21 2455555555555552 44444444444444444443
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.4e-15 Score=158.31 Aligned_cols=161 Identities=23% Similarity=0.236 Sum_probs=97.2
Q ss_pred CEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecc
Q 009965 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
+++.|+|++|.+++. | ++.+++|++|+|++|++++. | ++.+++|++|+|++|++++ +| ++.+++|++|+++
T Consensus 65 ~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~ 135 (457)
T 3bz5_A 65 GLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCA 135 (457)
T ss_dssp TCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECT
T ss_pred CCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECC
Confidence 455555555555552 2 45555555555555555542 2 4455555555555555543 22 4444444444444
Q ss_pred cccCc---------------------ccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCc--c
Q 009965 151 SNGLT---------------------GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG--L 207 (521)
Q Consensus 151 ~N~l~---------------------g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~--~ 207 (521)
+|+++ +.+ .++.+++|++|++++|++++ +|-. ....+..+++++|.+++ +
T Consensus 136 ~N~l~~l~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~l~----~l~~L~~L~l~~N~l~~~~l 208 (457)
T 3bz5_A 136 RNTLTEIDVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LDVS----QNKLLNRLNCDTNNITKLDL 208 (457)
T ss_dssp TSCCSCCCCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CCCT----TCTTCCEEECCSSCCSCCCC
T ss_pred CCccceeccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-eccc----cCCCCCEEECcCCcCCeecc
Confidence 44444 333 36677888888888888885 5522 12467778888888775 4
Q ss_pred cCCCCCCEEeccCCccccCCc-cccccCCCcccCCCcCCCCC
Q 009965 208 CHLSQLKVADFSYNFFVGSIP-KCLEYLPSTSFQGNCLQNKD 248 (521)
Q Consensus 208 ~~l~~L~~L~ls~N~l~g~ip-~~l~~l~~l~~~~N~l~~~~ 248 (521)
..+++|+.|++++|++++ +| ..+.+|+.+++++|++.+..
T Consensus 209 ~~l~~L~~L~Ls~N~l~~-ip~~~l~~L~~L~l~~N~l~~~~ 249 (457)
T 3bz5_A 209 NQNIQLTFLDCSSNKLTE-IDVTPLTQLTYFDCSVNPLTELD 249 (457)
T ss_dssp TTCTTCSEEECCSSCCSC-CCCTTCTTCSEEECCSSCCSCCC
T ss_pred ccCCCCCEEECcCCcccc-cCccccCCCCEEEeeCCcCCCcC
Confidence 567788888888888886 55 33456677788888777653
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.65 E-value=3.7e-17 Score=163.93 Aligned_cols=135 Identities=9% Similarity=0.020 Sum_probs=94.1
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccc----------cchhhHHH--------HHHHHHHHhccCCCCccceee
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEH----------WTGYLELY--------FQREVADLARINHENTGKLLG 425 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~----------~~~~~~~~--------~~~E~~~l~~l~H~niv~l~g 425 (521)
..||+|++|.||+|..++|+.||||++...... ........ ..+|...|.++.+.++....-
T Consensus 101 ~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp~p 180 (397)
T 4gyi_A 101 SRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVPEP 180 (397)
T ss_dssp EEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCE
T ss_pred CEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCCee
Confidence 689999999999999999999999987422100 00011112 234555555554443322221
Q ss_pred EEecCCCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCC---
Q 009965 426 YCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF--- 502 (521)
Q Consensus 426 ~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~--- 502 (521)
+... ..+|||||+++++|.++... + ....++.|++.+|.|||+. +||||||||.|||+++++
T Consensus 181 ~~~~----~~~LVME~i~G~~L~~l~~~------~--~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dgd~~ 245 (397)
T 4gyi_A 181 IAQS----RHTIVMSLVDALPMRQVSSV------P--DPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEKDAE 245 (397)
T ss_dssp EEEE----TTEEEEECCSCEEGGGCCCC------S--CHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEECSS
T ss_pred eecc----CceEEEEecCCccHhhhccc------H--HHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCCCcc
Confidence 2111 24799999999888776531 1 2346789999999999998 999999999999998776
Q ss_pred -------CeeeCCCchhh
Q 009965 503 -------SPKVSPLCLSF 513 (521)
Q Consensus 503 -------~~kl~DfGla~ 513 (521)
.+.|+||+-+-
T Consensus 246 d~~~~~~~~~iID~~Q~V 263 (397)
T 4gyi_A 246 DPSSITLTPIIIXFPQMV 263 (397)
T ss_dssp CTTSEEEEEEECCCTTCE
T ss_pred cccccccceEEEEeCCcc
Confidence 38999998653
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.3e-16 Score=167.62 Aligned_cols=148 Identities=19% Similarity=0.189 Sum_probs=112.7
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccC-CCccCceee
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIG-NLTGLVKIN 148 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~ 148 (521)
.+++.|+|++|.+++..+. .+++|++|+|++|.+++..|..++.+++|++|+|++|.+++.+|..+. .+++|++|+
T Consensus 99 ~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~ 175 (487)
T 3oja_A 99 PSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (487)
T ss_dssp TTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred CCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEe
Confidence 5788899999999886554 468899999999999998899999999999999999999988888886 799999999
Q ss_pred cccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcccCCCCCCEEeccCCccccCCc
Q 009965 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP 228 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~ip 228 (521)
|++|.+++. |. +..+++|++|+|++|.+++..|. +..+++|+.|++++|.|++ +|
T Consensus 176 Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~~~~~----------------------~~~l~~L~~L~Ls~N~l~~-lp 230 (487)
T 3oja_A 176 LQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPE----------------------FQSAAGVTWISLRNNKLVL-IE 230 (487)
T ss_dssp CTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGG----------------------GGGGTTCSEEECTTSCCCE-EC
T ss_pred cCCCccccc-cc-cccCCCCCEEECCCCCCCCCCHh----------------------HcCCCCccEEEecCCcCcc-cc
Confidence 999999965 33 44689999999999999964442 2233455555565555553 44
Q ss_pred ccc---ccCCCcccCCCcCC
Q 009965 229 KCL---EYLPSTSFQGNCLQ 245 (521)
Q Consensus 229 ~~l---~~l~~l~~~~N~l~ 245 (521)
..+ .++..+++++|++.
T Consensus 231 ~~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 231 KALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp TTCCCCTTCCEEECTTCCBC
T ss_pred hhhccCCCCCEEEcCCCCCc
Confidence 333 23444555555444
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=99.65 E-value=1.2e-15 Score=158.83 Aligned_cols=160 Identities=24% Similarity=0.336 Sum_probs=130.3
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|+|++|.+++ +| +++.+++|++|++++|++++ +|..+ ++|++|++++|++++ +| .++++++|++|++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 589999999999998 77 69999999999999999996 66543 589999999999996 67 6899999999999
Q ss_pred ccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcccC-CCCCCEEeccCCccccCCc
Q 009965 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCH-LSQLKVADFSYNFFVGSIP 228 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~-l~~L~~L~ls~N~l~g~ip 228 (521)
++|++++ +|... ++|++|++++|+++ .+|.. . ...++..+++++|.++++.. +++|+.|++++|++++ +|
T Consensus 203 ~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~~-~--~l~~L~~L~l~~N~l~~l~~~~~~L~~L~l~~N~l~~-l~ 273 (454)
T 1jl5_A 203 DNNSLKK-LPDLP---LSLESIVAGNNILE-ELPEL-Q--NLPFLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTD-LP 273 (454)
T ss_dssp CSSCCSS-CCCCC---TTCCEEECCSSCCS-SCCCC-T--TCTTCCEEECCSSCCSSCCSCCTTCCEEECCSSCCSC-CC
T ss_pred CCCcCCc-CCCCc---CcccEEECcCCcCC-ccccc-C--CCCCCCEEECCCCcCCcccccccccCEEECCCCcccc-cC
Confidence 9999985 55432 58889999999888 67742 1 23567788888888887643 4688888888888885 77
Q ss_pred cccccCCCcccCCCcCCC
Q 009965 229 KCLEYLPSTSFQGNCLQN 246 (521)
Q Consensus 229 ~~l~~l~~l~~~~N~l~~ 246 (521)
..+.+++.+++++|.+++
T Consensus 274 ~~~~~L~~L~ls~N~l~~ 291 (454)
T 1jl5_A 274 ELPQSLTFLDVSENIFSG 291 (454)
T ss_dssp CCCTTCCEEECCSSCCSE
T ss_pred cccCcCCEEECcCCccCc
Confidence 777788888888887776
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.65 E-value=6.2e-16 Score=151.32 Aligned_cols=145 Identities=26% Similarity=0.351 Sum_probs=125.3
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|+|++|.+++..+ +..+++|++|+|++|.+++ +| .+..+++|++|+|++|++++. +.+..+++|+.|+|
T Consensus 68 ~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l 141 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYL 141 (291)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEEC
T ss_pred CCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEc
Confidence 589999999999998544 9999999999999999986 44 499999999999999999863 57899999999999
Q ss_pred ccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc---cCCCCCCEEeccCCccccC
Q 009965 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGS 226 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~---~~l~~L~~L~ls~N~l~g~ 226 (521)
++|++++. ..+..+++|++|+|++|++++..|- ....++..+++++|.++.+ ..+++|+.|++++|+++..
T Consensus 142 ~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~l----~~l~~L~~L~L~~N~i~~l~~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 142 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPL----AGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGG----TTCTTCCEEECCSSCCCBCGGGTTCTTCSEEEEEEEEEECC
T ss_pred cCCcCCcc--hhhccCCCCCEEEccCCccccchhh----cCCCccCEEECCCCcCCCChhhccCCCCCEEECcCCcccCC
Confidence 99999964 6799999999999999999965541 1235788999999998764 5688999999999999853
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.64 E-value=5.1e-17 Score=178.62 Aligned_cols=147 Identities=23% Similarity=0.296 Sum_probs=118.3
Q ss_pred CCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceee
Q 009965 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
...++.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|+.|++|++|+|++|.|+ .+|..|++|++|++|+
T Consensus 223 l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 299 (727)
T 4b8c_D 223 DQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFY 299 (727)
T ss_dssp CCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEE
T ss_pred CCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEE
Confidence 457899999999998 58888889999999999999999 89999999999999999999999 8899999999999999
Q ss_pred cccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcccCCCCCCEEeccCC
Q 009965 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYN 221 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N 221 (521)
|++|.|+ .+|..|++|++|++|+|++|.|+|.+|..... .......++++.|.+++.. ...|+.|++++|
T Consensus 300 L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-~~~~~~~l~l~~N~l~~~~-p~~l~~l~l~~n 369 (727)
T 4b8c_D 300 FFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTE-KSVTGLIFYLRDNRPEIPL-PHERRFIEINTD 369 (727)
T ss_dssp CCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHH-HHHHHHHHHHHHCCCCCCC-CCC---------
T ss_pred CCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhh-cchhhhHHhhccCcccCcC-ccccceeEeecc
Confidence 9999998 88999999999999999999999888763321 1112234577888877643 356888888887
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.64 E-value=6.4e-16 Score=165.97 Aligned_cols=145 Identities=26% Similarity=0.365 Sum_probs=95.1
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+|+.|+|++|.|++..| +..+++|+.|+|++|.|++ +| .+..+++|+.|+|++|++++ + +.+..+++|+.|+|
T Consensus 65 ~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~L 138 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 138 (605)
T ss_dssp TTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEEC
T ss_pred CCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEEC
Confidence 467777777777776443 7777777777777777764 33 57777777777777777764 3 34667777777777
Q ss_pred ccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc---cCCCCCCEEeccCCccccC
Q 009965 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGS 226 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~---~~l~~L~~L~ls~N~l~g~ 226 (521)
++|.+++. ..|..+++|+.|+|++|.+++..|-. ...+|..+++++|.++++ ..+++|+.|+|++|.+++.
T Consensus 139 s~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~l~----~l~~L~~L~Ls~N~i~~l~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 139 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLA----GLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGGGT----TCTTCCEEECCSSCCCBCGGGTTCTTCSEEECCSEEEECC
T ss_pred CCCccCCc--hhhcccCCCCEEECcCCcCCCchhhc----cCCCCCEEECcCCCCCCChHHccCCCCCEEEccCCcCcCC
Confidence 77777743 46777777777777777777554411 124566666666666543 3456667777777766643
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.64 E-value=7.9e-16 Score=137.62 Aligned_cols=134 Identities=23% Similarity=0.182 Sum_probs=112.6
Q ss_pred cCCCCCCEEECcCCccc-ccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecccccCcccCchhhhCCCCCC
Q 009965 91 GLLTYLQELILHGNNLI-GIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLE 169 (521)
Q Consensus 91 ~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~ 169 (521)
...++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+.++++|+
T Consensus 21 ~~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 98 (168)
T 2ell_A 21 RTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLT 98 (168)
T ss_dssp SCTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCC
T ss_pred CCcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCC
Confidence 34588999999999998 78999999999999999999999965 7899999999999999999988999999999999
Q ss_pred EEeCCCCCCCccCCCCCCCcccccccccccccCCcCcccCCCCCCEEeccCCccccCCc---cc---cccCCCcccCCCc
Q 009965 170 ELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP---KC---LEYLPSTSFQGNC 243 (521)
Q Consensus 170 ~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~ip---~~---l~~l~~l~~~~N~ 243 (521)
+|+|++|++++ +|. +..+..+++|+.|++++|.+++..+ .. +.+|+.+++.+|.
T Consensus 99 ~L~Ls~N~l~~-~~~-------------------~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~ 158 (168)
T 2ell_A 99 HLNLSGNKLKD-IST-------------------LEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRE 158 (168)
T ss_dssp EEECBSSSCCS-SGG-------------------GGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETT
T ss_pred EEeccCCccCc-chh-------------------HHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCC
Confidence 99999999984 221 0134567899999999999996655 23 4566677888886
Q ss_pred CCC
Q 009965 244 LQN 246 (521)
Q Consensus 244 l~~ 246 (521)
+..
T Consensus 159 ~~~ 161 (168)
T 2ell_A 159 DQE 161 (168)
T ss_dssp SCB
T ss_pred hhh
Confidence 554
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.64 E-value=5.7e-16 Score=142.46 Aligned_cols=129 Identities=19% Similarity=0.260 Sum_probs=111.5
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|++++|.++. ++.+..+++|++|+|++|++++..|..+..+++|++|+|++|++++..|..+..+++|++|+|
T Consensus 66 ~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L 143 (197)
T 4ezg_A 66 HNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDL 143 (197)
T ss_dssp TTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEEC
T ss_pred CCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEc
Confidence 479999999997754 457999999999999999999888999999999999999999999888999999999999999
Q ss_pred cccc-CcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcccCCCCCCEEeccCCcccc
Q 009965 150 QSNG-LTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVG 225 (521)
Q Consensus 150 s~N~-l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g 225 (521)
++|. ++ .+| .+..+++|++|++++|++++ ++ .+..+++|+.|++++|++.+
T Consensus 144 ~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~----------------------~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 144 SYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR----------------------GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT----------------------TGGGCSSCCEEEECBC----
T ss_pred cCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH----------------------HhccCCCCCEEEeeCcccCC
Confidence 9998 55 676 69999999999999999984 32 23457789999999999864
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.1e-15 Score=153.17 Aligned_cols=168 Identities=22% Similarity=0.308 Sum_probs=133.5
Q ss_pred CCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceee
Q 009965 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
..+++.|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|++|++++|.+++ ++. +..+++|+.|+
T Consensus 131 l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~ 205 (347)
T 4fmz_A 131 LTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED-ISP-LASLTSLHYFT 205 (347)
T ss_dssp CTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC-CGG-GGGCTTCCEEE
T ss_pred CCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc-ccc-ccCCCccceee
Confidence 3578999999997666554 48999999999999999986544 8899999999999999985 443 88899999999
Q ss_pred cccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCc---ccCCCCCCEEeccCCcccc
Q 009965 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVG 225 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~---~~~l~~L~~L~ls~N~l~g 225 (521)
+++|.+++..+ +..+++|++|++++|++++..+ .....++..+++++|.++. +..+++|+.|++++|++++
T Consensus 206 l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~----~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~ 279 (347)
T 4fmz_A 206 AYVNQITDITP--VANMTRLNSLKIGNNKITDLSP----LANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISD 279 (347)
T ss_dssp CCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG----GTTCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCC
T ss_pred cccCCCCCCch--hhcCCcCCEEEccCCccCCCcc----hhcCCCCCEEECCCCccCCChhHhcCCCcCEEEccCCccCC
Confidence 99999995544 8899999999999999985433 1123578888999998876 4567899999999999985
Q ss_pred CCc--cccccCCCcccCCCcCCCCC
Q 009965 226 SIP--KCLEYLPSTSFQGNCLQNKD 248 (521)
Q Consensus 226 ~ip--~~l~~l~~l~~~~N~l~~~~ 248 (521)
. | ..+.+|+.+++++|.+....
T Consensus 280 ~-~~~~~l~~L~~L~L~~n~l~~~~ 303 (347)
T 4fmz_A 280 I-SVLNNLSQLNSLFLNNNQLGNED 303 (347)
T ss_dssp C-GGGGGCTTCSEEECCSSCCCGGG
T ss_pred C-hhhcCCCCCCEEECcCCcCCCcC
Confidence 4 4 23567788899999877643
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=99.63 E-value=1.5e-15 Score=158.84 Aligned_cols=166 Identities=27% Similarity=0.405 Sum_probs=122.5
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|++++|.+++. +.+..+++|++|++++|.+++..| ++.+++|+.|++++|++++ + ..+..+++|+.|++
T Consensus 177 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l 250 (466)
T 1o6v_A 177 TTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDL 250 (466)
T ss_dssp TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEEC
T ss_pred CCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCccc-c-hhhhcCCCCCEEEC
Confidence 4688888888888764 347788888888888888886655 6778888888888888874 3 35777888888888
Q ss_pred ccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc---cCCCCCCEEeccCCccccC
Q 009965 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGS 226 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~---~~l~~L~~L~ls~N~l~g~ 226 (521)
++|.+++..| +..+++|++|++++|.+++..|-. ....+..+++++|.++++ ..+++|+.|++++|++++.
T Consensus 251 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~----~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ 324 (466)
T 1o6v_A 251 ANNQISNLAP--LSGLTKLTELKLGANQISNISPLA----GLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDI 324 (466)
T ss_dssp CSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGGGT----TCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCC
T ss_pred CCCccccchh--hhcCCCCCEEECCCCccCcccccc----CCCccCeEEcCCCcccCchhhcCCCCCCEEECcCCcCCCc
Confidence 8888886544 778888888888888887544311 124677778888877664 4577888888888888876
Q ss_pred Cc-cccccCCCcccCCCcCCCC
Q 009965 227 IP-KCLEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 227 ip-~~l~~l~~l~~~~N~l~~~ 247 (521)
.| ..+.+|+.+++++|.+.+.
T Consensus 325 ~~~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 325 SPVSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp GGGGGCTTCCEEECCSSCCCCC
T ss_pred hhhccCccCCEeECCCCccCCc
Confidence 65 3346667778888877664
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.63 E-value=1.7e-15 Score=162.74 Aligned_cols=166 Identities=23% Similarity=0.323 Sum_probs=139.0
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+|+.|+|++|.+... + .+..+++|+.|+|++|+|++..| +..+++|+.|+|++|++++ +| .+..+++|+.|+|
T Consensus 43 ~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~L 116 (605)
T 1m9s_A 43 NSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSL 116 (605)
T ss_dssp TTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEe
Confidence 4688899999999874 3 69999999999999999997655 9999999999999999985 44 7999999999999
Q ss_pred ccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc---cCCCCCCEEeccCCccccC
Q 009965 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGS 226 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~---~~l~~L~~L~ls~N~l~g~ 226 (521)
++|.+++ + +.+..+++|+.|+|++|++++. +.. ....+|..+++++|.++++ ..+++|+.|+|++|+|++
T Consensus 117 s~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l-~~l---~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~i~~- 189 (605)
T 1m9s_A 117 EHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVL---SRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD- 189 (605)
T ss_dssp TTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC-GGG---GSCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCB-
T ss_pred cCCCCCC-C-ccccCCCccCEEECCCCccCCc-hhh---cccCCCCEEECcCCcCCCchhhccCCCCCEEECcCCCCCC-
Confidence 9999995 4 4699999999999999999854 321 1235788999999998864 568899999999999986
Q ss_pred Ccc--ccccCCCcccCCCcCCCCC
Q 009965 227 IPK--CLEYLPSTSFQGNCLQNKD 248 (521)
Q Consensus 227 ip~--~l~~l~~l~~~~N~l~~~~ 248 (521)
+|. .+.+|..|++++|++....
T Consensus 190 l~~l~~l~~L~~L~L~~N~l~~~p 213 (605)
T 1m9s_A 190 LRALAGLKNLDVLELFSQECLNKP 213 (605)
T ss_dssp CGGGTTCTTCSEEECCSEEEECCC
T ss_pred ChHHccCCCCCEEEccCCcCcCCc
Confidence 452 3466778899999887653
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.62 E-value=1.8e-17 Score=168.98 Aligned_cols=175 Identities=17% Similarity=0.136 Sum_probs=85.3
Q ss_pred CCEEEEEecCC---CCCccCCccc-------cCCCCCCEEECcCCcccc----cCCccccCCCCCcEEEccCCcCCCCCC
Q 009965 70 DRVLKINISGS---SLKGFLAPEL-------GLLTYLQELILHGNNLIG----IIPKELGLLKRLKILDLGTNQLTGPIP 135 (521)
Q Consensus 70 ~~l~~L~L~~n---~l~~~~p~~l-------~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~g~~p 135 (521)
.+++.|+|++| .+++.+|..+ ..+++|++|+|++|.+++ .+|..+..+++|++|+|++|.+++..+
T Consensus 60 ~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~ 139 (386)
T 2ca6_A 60 KDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAG 139 (386)
T ss_dssp TTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHH
T ss_pred CCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHH
Confidence 35556666553 3334444433 455666666666666654 345555556666666666665543222
Q ss_pred cccC----CC---------ccCceeecccccCc-ccCc---hhhhCCCCCCEEeCCCCCCC--c---cCCCCCCCccccc
Q 009965 136 PEIG----NL---------TGLVKINLQSNGLT-GRLP---AELGNLISLEELHLDRNRLQ--G---AVPAGSNSGYTAN 193 (521)
Q Consensus 136 ~~~~----~l---------~~L~~L~Ls~N~l~-g~~p---~~~~~l~~L~~L~Ls~N~l~--g---~~p~~~~~~~~~~ 193 (521)
..+. .+ ++|++|+|++|+++ +.+| ..+..+++|++|+|++|+++ | .+|.... ...+
T Consensus 140 ~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~--~~~~ 217 (386)
T 2ca6_A 140 AKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLA--YCQE 217 (386)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGG--GCTT
T ss_pred HHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhh--cCCC
Confidence 2222 22 55666666666655 3333 34445556666666666554 1 1111110 1124
Q ss_pred ccccccccCCcC---------cccCCCCCCEEeccCCccccC----Cccc-----cccCCCcccCCCcCCC
Q 009965 194 IHGMYASSANLT---------GLCHLSQLKVADFSYNFFVGS----IPKC-----LEYLPSTSFQGNCLQN 246 (521)
Q Consensus 194 l~~l~l~~n~l~---------~~~~l~~L~~L~ls~N~l~g~----ip~~-----l~~l~~l~~~~N~l~~ 246 (521)
+..+++++|.++ .+..+++|+.|+|++|.+++. +|.. +.+|..|++++|.+..
T Consensus 218 L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~ 288 (386)
T 2ca6_A 218 LKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIEL 288 (386)
T ss_dssp CCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred ccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCH
Confidence 455555555552 133445555555555555443 3332 2334555555555443
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.7e-15 Score=146.00 Aligned_cols=142 Identities=24% Similarity=0.324 Sum_probs=104.4
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|++++|.++. ++ .+..+++|++|+|++|++++..| +..+++|++|+|++|++++ +|... . ++|++|+|
T Consensus 41 ~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~-~-~~L~~L~L 113 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIP-S-ACLSRLFL 113 (263)
T ss_dssp TTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCC-C-SSCCEEEC
T ss_pred CcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCccc-c-CcccEEEc
Confidence 478899999999986 44 78999999999999999997554 9999999999999999985 55433 3 89999999
Q ss_pred ccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc---cCCCCCCEEeccCCccc
Q 009965 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFV 224 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~---~~l~~L~~L~ls~N~l~ 224 (521)
++|++++ +| .+..+++|++|+|++|++++ +|. .....++..+++++|.++++ ..+++|+.|++++|.++
T Consensus 114 ~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~-~~~---l~~l~~L~~L~L~~N~i~~~~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 114 DNNELRD-TD-SLIHLKNLEILSIRNNKLKS-IVM---LGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp CSSCCSB-SG-GGTTCTTCCEEECTTSCCCB-CGG---GGGCTTCCEEECTTSCCCBCTTSTTCCCCCEEEEEEEEEE
T ss_pred cCCccCC-Ch-hhcCcccccEEECCCCcCCC-ChH---HccCCCCCEEECCCCcCcchHHhccCCCCCEEeCCCCccc
Confidence 9999995 44 59999999999999999985 331 11112444445555544432 23444555555555554
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.62 E-value=5.4e-16 Score=149.46 Aligned_cols=164 Identities=22% Similarity=0.256 Sum_probs=131.1
Q ss_pred CEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecc
Q 009965 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
+++.+++++|.+++.. .+..+++|++|++++|.++ .+| .+..+++|++|+|++|++++..| +..+++|++|+|+
T Consensus 20 ~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~ 93 (263)
T 1xeu_A 20 NAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVN 93 (263)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECC
T ss_pred HHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECC
Confidence 3556778888888743 6889999999999999998 456 78999999999999999996544 9999999999999
Q ss_pred cccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc---cCCCCCCEEeccCCccccCC
Q 009965 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGSI 227 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~---~~l~~L~~L~ls~N~l~g~i 227 (521)
+|++++ +|.. .. ++|++|+|++|++++ +|.. ....++..+++++|.++++ ..+++|+.|++++|++++.-
T Consensus 94 ~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~-~~~l---~~l~~L~~L~Ls~N~i~~~~~l~~l~~L~~L~L~~N~i~~~~ 166 (263)
T 1xeu_A 94 RNRLKN-LNGI-PS-ACLSRLFLDNNELRD-TDSL---IHLKNLEILSIRNNKLKSIVMLGFLSKLEVLDLHGNEITNTG 166 (263)
T ss_dssp SSCCSC-CTTC-CC-SSCCEEECCSSCCSB-SGGG---TTCTTCCEEECTTSCCCBCGGGGGCTTCCEEECTTSCCCBCT
T ss_pred CCccCC-cCcc-cc-CcccEEEccCCccCC-Chhh---cCcccccEEECCCCcCCCChHHccCCCCCEEECCCCcCcchH
Confidence 999995 5543 33 999999999999995 4431 1235788899999998764 56789999999999998661
Q ss_pred c-cccccCCCcccCCCcCCCC
Q 009965 228 P-KCLEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 228 p-~~l~~l~~l~~~~N~l~~~ 247 (521)
. ..+.+|+.+++++|++...
T Consensus 167 ~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 167 GLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp TSTTCCCCCEEEEEEEEEECC
T ss_pred HhccCCCCCEEeCCCCcccCC
Confidence 1 2345667788999977664
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.62 E-value=1.1e-15 Score=133.79 Aligned_cols=123 Identities=21% Similarity=0.250 Sum_probs=104.4
Q ss_pred CCCCCCEEECcCCccc-ccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecccccCcccCchhhhCCCCCCE
Q 009965 92 LLTYLQELILHGNNLI-GIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEE 170 (521)
Q Consensus 92 ~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 170 (521)
..++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|+|++|.+++.+|..+..+++|++
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3478999999999998 88999999999999999999999966 78999999999999999999889999999999999
Q ss_pred EeCCCCCCCccCCCCCCCcccccccccccccCCcCcccCCCCCCEEeccCCccccCCc---cccccCCC
Q 009965 171 LHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP---KCLEYLPS 236 (521)
Q Consensus 171 L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~ip---~~l~~l~~ 236 (521)
|++++|++++. |. +..+..+++|+.|++++|.+++..+ ..+..++.
T Consensus 93 L~ls~N~i~~~-~~-------------------~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~ 141 (149)
T 2je0_A 93 LNLSGNKIKDL-ST-------------------IEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQ 141 (149)
T ss_dssp EECTTSCCCSH-HH-------------------HGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTT
T ss_pred EECCCCcCCCh-HH-------------------HHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCC
Confidence 99999999852 10 0134567899999999999997665 34544443
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.61 E-value=5.8e-16 Score=153.48 Aligned_cols=157 Identities=17% Similarity=0.136 Sum_probs=121.6
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccC-CCccCceee
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIG-NLTGLVKIN 148 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~ 148 (521)
.+++.|++++|.+++..+. .+++|++|+|++|++++..|..+..+++|++|+|++|.+++..|..+. .+++|++|+
T Consensus 99 ~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~ 175 (317)
T 3o53_A 99 PSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (317)
T ss_dssp TTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred CCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEE
Confidence 5788899999999886544 368899999999999988888999999999999999999987777774 789999999
Q ss_pred cccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc----cCCCCCCEEeccCCccc
Q 009965 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL----CHLSQLKVADFSYNFFV 224 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~----~~l~~L~~L~ls~N~l~ 224 (521)
|++|.+++. |. ...+++|++|+|++|++++ +|.... ...++..+++++|.++.+ ..+++|+.|++++|.++
T Consensus 176 L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~-l~~~~~--~l~~L~~L~L~~N~l~~l~~~~~~l~~L~~L~l~~N~~~ 250 (317)
T 3o53_A 176 LQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAF-MGPEFQ--SAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFH 250 (317)
T ss_dssp CTTSCCCEE-EC-CCCCTTCCEEECCSSCCCE-ECGGGG--GGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCCB
T ss_pred CCCCcCccc-cc-ccccccCCEEECCCCcCCc-chhhhc--ccCcccEEECcCCcccchhhHhhcCCCCCEEEccCCCcc
Confidence 999999954 43 3458999999999999995 443321 124667777777777653 34667788888888777
Q ss_pred -cCCccccccC
Q 009965 225 -GSIPKCLEYL 234 (521)
Q Consensus 225 -g~ip~~l~~l 234 (521)
+.+|..+..+
T Consensus 251 ~~~~~~~~~~~ 261 (317)
T 3o53_A 251 CGTLRDFFSKN 261 (317)
T ss_dssp HHHHHHHHHTC
T ss_pred CcCHHHHHhcc
Confidence 5566555444
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.61 E-value=2.9e-15 Score=134.30 Aligned_cols=107 Identities=30% Similarity=0.319 Sum_probs=96.2
Q ss_pred EEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecccc
Q 009965 73 LKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152 (521)
Q Consensus 73 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 152 (521)
+.|++++|.++. +|..+ .++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 467888999987 66665 389999999999999988999999999999999999999877778899999999999999
Q ss_pred cCcccCchhhhCCCCCCEEeCCCCCCCccC
Q 009965 153 GLTGRLPAELGNLISLEELHLDRNRLQGAV 182 (521)
Q Consensus 153 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~ 182 (521)
+|++..|..|..+++|++|+|++|.++...
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 999777778999999999999999998543
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=1.7e-15 Score=161.61 Aligned_cols=108 Identities=26% Similarity=0.273 Sum_probs=100.8
Q ss_pred CEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecc
Q 009965 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
.++.|+|++|.|++ +|. ++.+++|+.|+|++|+|+ .+|..|+.+++|++|+|++|+|++ +| .++++++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 47889999999998 665 999999999999999999 789999999999999999999996 77 89999999999999
Q ss_pred cccCcccC-chhhhCCCCCCEEeCCCCCCCccCC
Q 009965 151 SNGLTGRL-PAELGNLISLEELHLDRNRLQGAVP 183 (521)
Q Consensus 151 ~N~l~g~~-p~~~~~l~~L~~L~Ls~N~l~g~~p 183 (521)
+|+|++.. |..|+.+++|+.|+|++|.+++.+|
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 99999876 9999999999999999999996655
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.59 E-value=1.6e-16 Score=160.51 Aligned_cols=178 Identities=20% Similarity=0.203 Sum_probs=117.1
Q ss_pred CCEEEEEecCCCCCccCC----ccccCCC-CCCEEECcCCcccccCCccccCC-----CCCcEEEccCCcCCCCCCcccC
Q 009965 70 DRVLKINISGSSLKGFLA----PELGLLT-YLQELILHGNNLIGIIPKELGLL-----KRLKILDLGTNQLTGPIPPEIG 139 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p----~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~g~~p~~~~ 139 (521)
.+++.|+|++|.+++..+ ..+..++ +|++|+|++|.+++..+..+..+ ++|++|+|++|++++..+..+.
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHH
Confidence 357888888888877655 5677777 78888888888877666666664 7888888888888766665444
Q ss_pred C----C-ccCceeecccccCcccCchhhh----C-CCCCCEEeCCCCCCCccCCCCCCC---cccccccccccccCCcCc
Q 009965 140 N----L-TGLVKINLQSNGLTGRLPAELG----N-LISLEELHLDRNRLQGAVPAGSNS---GYTANIHGMYASSANLTG 206 (521)
Q Consensus 140 ~----l-~~L~~L~Ls~N~l~g~~p~~~~----~-l~~L~~L~Ls~N~l~g~~p~~~~~---~~~~~l~~l~l~~n~l~~ 206 (521)
. + ++|++|+|++|++++..+..+. . .++|++|+|++|.+++..+..... .....+..+++++|.++.
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~ 181 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLAS 181 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCch
Confidence 3 3 7788888888888766555543 3 257888888888877422211100 011256777777777764
Q ss_pred cc---------CC-CCCCEEeccCCccccC----Ccccc----ccCCCcccCCCcCCCC
Q 009965 207 LC---------HL-SQLKVADFSYNFFVGS----IPKCL----EYLPSTSFQGNCLQNK 247 (521)
Q Consensus 207 ~~---------~l-~~L~~L~ls~N~l~g~----ip~~l----~~l~~l~~~~N~l~~~ 247 (521)
.. .. ++|+.|||++|.+++. +|..+ .+|+.+++++|.+...
T Consensus 182 ~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~ 240 (362)
T 3goz_A 182 KNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGP 240 (362)
T ss_dssp SCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCC
T ss_pred hhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcH
Confidence 32 23 4788888888877753 33333 3566777777766653
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.59 E-value=2.3e-15 Score=142.80 Aligned_cols=169 Identities=20% Similarity=0.179 Sum_probs=146.8
Q ss_pred CCCEEEEEecCCC-CCccCCccccCCCCCCEEECcC-CcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCc-
Q 009965 69 RDRVLKINISGSS-LKGFLAPELGLLTYLQELILHG-NNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLV- 145 (521)
Q Consensus 69 ~~~l~~L~L~~n~-l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~- 145 (521)
..+++.|+|++|. +++..+..|..+++|++|+|++ |++++..+..|..+++|++|+|++|++++ +|. |..+++|+
T Consensus 54 l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 54 LPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDI 131 (239)
T ss_dssp CTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCS
T ss_pred CCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccccccccc
Confidence 3579999999997 8887777899999999999999 99998888899999999999999999996 776 88999998
Q ss_pred --eeecccc-cCcccCchhhhCCCCCC-EEeCCCCCCCccCCCCCCCcccccccccccccCC-cCc-----ccCC-CCCC
Q 009965 146 --KINLQSN-GLTGRLPAELGNLISLE-ELHLDRNRLQGAVPAGSNSGYTANIHGMYASSAN-LTG-----LCHL-SQLK 214 (521)
Q Consensus 146 --~L~Ls~N-~l~g~~p~~~~~l~~L~-~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~-l~~-----~~~l-~~L~ 214 (521)
+|++++| ++++..+..|.++++|+ +|++++|+++ .+|...+.. .++..+++++|. ++. +..+ ++|+
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~--~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~ 208 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNG--TKLDAVYLNKNKYLTVIDKDAFGGVYSGPS 208 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTT--CEEEEEECTTCTTCCEECTTTTTTCSBCCS
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCC--CCCCEEEcCCCCCcccCCHHHhhccccCCc
Confidence 9999999 99977777899999999 9999999999 788765543 578899999994 765 3457 8999
Q ss_pred EEeccCCccccCCccccccCCCcccCCC
Q 009965 215 VADFSYNFFVGSIPKCLEYLPSTSFQGN 242 (521)
Q Consensus 215 ~L~ls~N~l~g~ip~~l~~l~~l~~~~N 242 (521)
.|++++|++++..+..+.+++.|++.++
T Consensus 209 ~L~l~~N~l~~l~~~~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 209 LLDVSQTSVTALPSKGLEHLKELIARNT 236 (239)
T ss_dssp EEECTTCCCCCCCCTTCTTCSEEECTTC
T ss_pred EEECCCCccccCChhHhccCceeeccCc
Confidence 9999999999555566888888888765
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.59 E-value=1.1e-16 Score=161.76 Aligned_cols=172 Identities=17% Similarity=0.138 Sum_probs=103.9
Q ss_pred EEecCCCCCccCCccccCCCCCCEEECcCCcccccCC----ccccCCC-CCcEEEccCCcCCCCCCcccCCC-----ccC
Q 009965 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIP----KELGLLK-RLKILDLGTNQLTGPIPPEIGNL-----TGL 144 (521)
Q Consensus 75 L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l-----~~L 144 (521)
.+|+.|.++|.+|..+...++|++|+|++|.+++..+ ..+..++ +|++|+|++|.+++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4666777777666666666667777777777765555 5566666 67777777777766666666554 677
Q ss_pred ceeecccccCcccCchhhh----CC-CCCCEEeCCCCCCCccCCCCCCC---cccccccccccccCCcCc-----c----
Q 009965 145 VKINLQSNGLTGRLPAELG----NL-ISLEELHLDRNRLQGAVPAGSNS---GYTANIHGMYASSANLTG-----L---- 207 (521)
Q Consensus 145 ~~L~Ls~N~l~g~~p~~~~----~l-~~L~~L~Ls~N~l~g~~p~~~~~---~~~~~l~~l~l~~n~l~~-----~---- 207 (521)
++|+|++|++++..+..+. .+ ++|++|+|++|++++..+..... .....+..+++++|.++. +
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 7777777777765555433 33 67777777777776433221110 001356666777776652 1
Q ss_pred cCCC-CCCEEeccCCccccCCcccc--------ccCCCcccCCCcCCC
Q 009965 208 CHLS-QLKVADFSYNFFVGSIPKCL--------EYLPSTSFQGNCLQN 246 (521)
Q Consensus 208 ~~l~-~L~~L~ls~N~l~g~ip~~l--------~~l~~l~~~~N~l~~ 246 (521)
..++ +|+.|+|++|++++..+..+ .+|+.+++++|.+..
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~ 210 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGL 210 (362)
T ss_dssp HTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred hcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCCh
Confidence 1233 67777777777765555322 256666777776655
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.59 E-value=1e-14 Score=156.86 Aligned_cols=73 Identities=32% Similarity=0.384 Sum_probs=31.0
Q ss_pred CEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecc
Q 009965 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
+++.|+|++|.|++ +|. .+++|++|+|++|++++ +|. .+++|+.|+|++|++++ +|.. +++|++|+|+
T Consensus 82 ~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls 149 (622)
T 3g06_A 82 ELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVS 149 (622)
T ss_dssp TCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECC
T ss_pred CCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECc
Confidence 34444444444443 222 33444444444444442 222 23344444444444442 3322 2455555555
Q ss_pred cccCc
Q 009965 151 SNGLT 155 (521)
Q Consensus 151 ~N~l~ 155 (521)
+|+++
T Consensus 150 ~N~l~ 154 (622)
T 3g06_A 150 DNQLA 154 (622)
T ss_dssp SSCCS
T ss_pred CCcCC
Confidence 55555
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.59 E-value=9.3e-17 Score=163.70 Aligned_cols=178 Identities=22% Similarity=0.273 Sum_probs=140.3
Q ss_pred CCEEEEEecCCCCCccC----CccccCCCCCCEEECcCC---cccccCCccc-------cCCCCCcEEEccCCcCCC---
Q 009965 70 DRVLKINISGSSLKGFL----APELGLLTYLQELILHGN---NLIGIIPKEL-------GLLKRLKILDLGTNQLTG--- 132 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~----p~~l~~l~~L~~L~L~~N---~l~~~~p~~~-------~~l~~L~~L~Ls~N~l~g--- 132 (521)
.+++.|+|++|.+++.. +..+..+++|++|+|++| ++++.+|..+ ..+++|++|+|++|.+++
T Consensus 32 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~ 111 (386)
T 2ca6_A 32 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQ 111 (386)
T ss_dssp SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTH
T ss_pred CCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHH
Confidence 46999999999998763 345778999999999995 5566677665 789999999999999997
Q ss_pred -CCCcccCCCccCceeecccccCcccCchhhh----CC---------CCCCEEeCCCCCCC-ccCCCCC-CCcccccccc
Q 009965 133 -PIPPEIGNLTGLVKINLQSNGLTGRLPAELG----NL---------ISLEELHLDRNRLQ-GAVPAGS-NSGYTANIHG 196 (521)
Q Consensus 133 -~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~----~l---------~~L~~L~Ls~N~l~-g~~p~~~-~~~~~~~l~~ 196 (521)
.+|..+..+++|++|+|++|.+++..+..+. .+ ++|++|+|++|+++ +.+|... ......++..
T Consensus 112 ~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~ 191 (386)
T 2ca6_A 112 EPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHT 191 (386)
T ss_dssp HHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCE
T ss_pred HHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCE
Confidence 4788899999999999999999855444444 44 99999999999997 3344200 0001236888
Q ss_pred cccccCCcC----------cccCCCCCCEEeccCCccc----cCCcccc---ccCCCcccCCCcCCCC
Q 009965 197 MYASSANLT----------GLCHLSQLKVADFSYNFFV----GSIPKCL---EYLPSTSFQGNCLQNK 247 (521)
Q Consensus 197 l~l~~n~l~----------~~~~l~~L~~L~ls~N~l~----g~ip~~l---~~l~~l~~~~N~l~~~ 247 (521)
+++++|.++ .+..+++|+.|+|++|.++ +.+|..+ .+|+.|++++|.+...
T Consensus 192 L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~ 259 (386)
T 2ca6_A 192 VKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSAR 259 (386)
T ss_dssp EECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHH
T ss_pred EECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchh
Confidence 999999988 5667899999999999996 5677655 5677788999977653
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.59 E-value=6.6e-15 Score=132.51 Aligned_cols=105 Identities=25% Similarity=0.269 Sum_probs=94.7
Q ss_pred EEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecccc
Q 009965 73 LKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152 (521)
Q Consensus 73 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 152 (521)
+.+++++|+++. +|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~~-iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLAS-VPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCCc-cCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 568999999965 677664 89999999999999998999999999999999999999766667899999999999999
Q ss_pred cCcccCchhhhCCCCCCEEeCCCCCCCc
Q 009965 153 GLTGRLPAELGNLISLEELHLDRNRLQG 180 (521)
Q Consensus 153 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 180 (521)
+|++..+..|..+++|++|+|++|.+..
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccc
Confidence 9997666669999999999999999984
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.58 E-value=2.2e-15 Score=135.85 Aligned_cols=132 Identities=23% Similarity=0.248 Sum_probs=108.5
Q ss_pred CCEEEEEecCCCCCccCCccccCCC-CCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceee
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLT-YLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
.+++.|+|++|.++. +|. +..+. +|++|+|++|.+++. ..|..+++|++|+|++|++++..|..+..+++|++|+
T Consensus 19 ~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 19 VRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp TSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred CCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 478999999999996 454 55555 999999999999975 6799999999999999999965455568999999999
Q ss_pred cccccCcccCch--hhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcccCCCCCCEEeccCCccc
Q 009965 149 LQSNGLTGRLPA--ELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFV 224 (521)
Q Consensus 149 Ls~N~l~g~~p~--~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~ 224 (521)
|++|+++ .+|. .+..+++|+.|++++|.++ .+|... ...+..+++|+.||+++|.+.
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~-----------------~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYR-----------------LYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHH-----------------HHHHHHCTTCSEETTEECCHH
T ss_pred CCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHH-----------------HHHHHHCCccceeCCCcCCHH
Confidence 9999997 6776 8999999999999999998 455310 001345788999999999765
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.58 E-value=9e-17 Score=160.39 Aligned_cols=170 Identities=20% Similarity=0.191 Sum_probs=115.1
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCccccc-CCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceee
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGI-IPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
.+++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+..+++|++|+|++|.+++..|..+..+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4567777777777775444 55678888888888887755 677777788888888888887777777777788888888
Q ss_pred cccc-cCcc-cCchhhhCCCCCCEEeCCCC-CCCcc-CCCCCCCcccc-cccccccccCC--cCc------ccCCCCCCE
Q 009965 149 LQSN-GLTG-RLPAELGNLISLEELHLDRN-RLQGA-VPAGSNSGYTA-NIHGMYASSAN--LTG------LCHLSQLKV 215 (521)
Q Consensus 149 Ls~N-~l~g-~~p~~~~~l~~L~~L~Ls~N-~l~g~-~p~~~~~~~~~-~l~~l~l~~n~--l~~------~~~l~~L~~ 215 (521)
|++| .+++ .+|..+.++++|++|++++| .+++. ++... . ... ++..+++++|. ++. +..+++|+.
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~-~-~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~ 226 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAV-A-HVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVH 226 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHH-H-HSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSE
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHH-H-hcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCE
Confidence 8887 5665 36666777888888888888 77643 22211 0 113 56677777773 331 235677888
Q ss_pred EeccCCc-cccCCcccc---ccCCCcccCCC
Q 009965 216 ADFSYNF-FVGSIPKCL---EYLPSTSFQGN 242 (521)
Q Consensus 216 L~ls~N~-l~g~ip~~l---~~l~~l~~~~N 242 (521)
|++++|. +++..+..+ .+|+.+++++|
T Consensus 227 L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~ 257 (336)
T 2ast_B 227 LDLSDSVMLKNDCFQEFFQLNYLQHLSLSRC 257 (336)
T ss_dssp EECTTCTTCCGGGGGGGGGCTTCCEEECTTC
T ss_pred EeCCCCCcCCHHHHHHHhCCCCCCEeeCCCC
Confidence 8887777 555555444 34555666666
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.57 E-value=4.4e-16 Score=155.36 Aligned_cols=171 Identities=19% Similarity=0.201 Sum_probs=130.3
Q ss_pred CCEEEEEecCCCCCcc-CCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCC-cCCC-CCCcccCCCccCce
Q 009965 70 DRVLKINISGSSLKGF-LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTN-QLTG-PIPPEIGNLTGLVK 146 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~g-~~p~~~~~l~~L~~ 146 (521)
.+++.|+|++|.+++. ++..+..+++|++|+|++|.+++..|..+..+++|++|+|++| .+++ .+|..+.++++|++
T Consensus 93 ~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~ 172 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 172 (336)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCE
Confidence 5789999999998876 7888899999999999999999888888999999999999999 6775 36777888999999
Q ss_pred eecccc-cCccc-CchhhhCCC-CCCEEeCCCC--CCC-ccCCCCCCCcccccccccccccCC-cC-----cccCCCCCC
Q 009965 147 INLQSN-GLTGR-LPAELGNLI-SLEELHLDRN--RLQ-GAVPAGSNSGYTANIHGMYASSAN-LT-----GLCHLSQLK 214 (521)
Q Consensus 147 L~Ls~N-~l~g~-~p~~~~~l~-~L~~L~Ls~N--~l~-g~~p~~~~~~~~~~l~~l~l~~n~-l~-----~~~~l~~L~ 214 (521)
|+|++| .+++. ++..+..++ +|++|+|++| .++ +.+|.... ...++..+++++|. ++ .+..+++|+
T Consensus 173 L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~--~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~ 250 (336)
T 2ast_B 173 LNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVR--RCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQ 250 (336)
T ss_dssp EECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHH--HCTTCSEEECTTCTTCCGGGGGGGGGCTTCC
T ss_pred EcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHh--hCCCCCEEeCCCCCcCCHHHHHHHhCCCCCC
Confidence 999999 88864 677888899 9999999999 454 33333110 12467778888877 44 245678899
Q ss_pred EEeccCCc-cccCCc---cccccCCCcccCCC
Q 009965 215 VADFSYNF-FVGSIP---KCLEYLPSTSFQGN 242 (521)
Q Consensus 215 ~L~ls~N~-l~g~ip---~~l~~l~~l~~~~N 242 (521)
.|++++|. +..... ..+.+|+.+++++|
T Consensus 251 ~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 251 HLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp EEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred EeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 99998885 221111 12455667778877
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.53 E-value=6.1e-14 Score=125.65 Aligned_cols=109 Identities=25% Similarity=0.314 Sum_probs=94.1
Q ss_pred CCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecccccCcccCchhhhCCCCCCEEeCCC
Q 009965 96 LQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDR 175 (521)
Q Consensus 96 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 175 (521)
.+.|++++|+++. +|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 5789999999994 777664 8999999999999988899999999999999999999977777789999999999999
Q ss_pred CCCCccCCCCCCCcccccccccccccCCcCcccCCCCCCEEeccCCccccCCc
Q 009965 176 NRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP 228 (521)
Q Consensus 176 N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~ip 228 (521)
|+|++ +|.. .+..+++|+.|+|++|.+++..+
T Consensus 88 N~l~~-~~~~--------------------~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKS-IPRG--------------------AFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCC-CCTT--------------------TTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCE-eCHH--------------------HhcCCCCCCEEEeCCCCCCCCch
Confidence 99994 4432 23457789999999999986543
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.52 E-value=4.2e-17 Score=150.22 Aligned_cols=134 Identities=22% Similarity=0.302 Sum_probs=110.5
Q ss_pred CEEEEEecCCCCCccCCc------cccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccC
Q 009965 71 RVLKINISGSSLKGFLAP------ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGL 144 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~------~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 144 (521)
+++.++++.+.++|.+|. .+..+++|++|+|++|++++ +| .+..+++|++|+|++|+++ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 455566666666666665 89999999999999999996 67 8999999999999999998 788888888999
Q ss_pred ceeecccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcccCCCCCCEEeccCCccc
Q 009965 145 VKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFV 224 (521)
Q Consensus 145 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~ 224 (521)
++|+|++|++++ +| .+..+++|++|+|++|++++. |. +..+..+++|++|++++|.++
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~-~~-------------------~~~l~~l~~L~~L~l~~N~l~ 153 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNW-GE-------------------IDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCH-HH-------------------HHHHTTTTTCSEEEECSCHHH
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCch-hH-------------------HHHHhcCCCCCEEEecCCccc
Confidence 999999999995 55 688999999999999998732 21 012455788999999999998
Q ss_pred cCCcc
Q 009965 225 GSIPK 229 (521)
Q Consensus 225 g~ip~ 229 (521)
+.+|.
T Consensus 154 ~~~~~ 158 (198)
T 1ds9_A 154 NDYKE 158 (198)
T ss_dssp HHHHT
T ss_pred ccccc
Confidence 77664
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.51 E-value=4.1e-14 Score=142.16 Aligned_cols=171 Identities=19% Similarity=0.147 Sum_probs=136.9
Q ss_pred CCCEEEEEecCCCCCccCCc-cccCCCCCCE-EECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCce
Q 009965 69 RDRVLKINISGSSLKGFLAP-ELGLLTYLQE-LILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVK 146 (521)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~p~-~l~~l~~L~~-L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 146 (521)
-.+++.|+|++|.+.+.+|. .|.++++|++ ++++.|++++..|..|..+++|++|++++|++++..+..+....++..
T Consensus 53 l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~ 132 (350)
T 4ay9_X 53 FGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVL 132 (350)
T ss_dssp CTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEE
T ss_pred CCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhh
Confidence 35899999999999887765 5789998875 677789999888999999999999999999999777777888888999
Q ss_pred eeccc-ccCcccCchhhhCCC-CCCEEeCCCCCCCccCCCCCCCccccccccccccc-CCcCc-----ccCCCCCCEEec
Q 009965 147 INLQS-NGLTGRLPAELGNLI-SLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASS-ANLTG-----LCHLSQLKVADF 218 (521)
Q Consensus 147 L~Ls~-N~l~g~~p~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~-n~l~~-----~~~l~~L~~L~l 218 (521)
|++++ |+++...+..|..+. .|+.|+|++|+|+ .+|...+.. ..+..++++. |.++. +..+++|+.||+
T Consensus 133 l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~--~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdL 209 (350)
T 4ay9_X 133 LDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNG--TQLDELNLSDNNNLEELPNDVFHGASGPVILDI 209 (350)
T ss_dssp EEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTT--EEEEEEECTTCTTCCCCCTTTTTTEECCSEEEC
T ss_pred hhhccccccccccccchhhcchhhhhhcccccccc-CCChhhccc--cchhHHhhccCCcccCCCHHHhccCcccchhhc
Confidence 99966 677755556777765 6899999999999 676655442 4677777764 66654 456789999999
Q ss_pred cCCccccCCccccccCCCcccCCC
Q 009965 219 SYNFFVGSIPKCLEYLPSTSFQGN 242 (521)
Q Consensus 219 s~N~l~g~ip~~l~~l~~l~~~~N 242 (521)
++|+|+...+..+.+++.|...++
T Consensus 210 s~N~l~~lp~~~~~~L~~L~~l~~ 233 (350)
T 4ay9_X 210 SRTRIHSLPSYGLENLKKLRARST 233 (350)
T ss_dssp TTSCCCCCCSSSCTTCCEEECTTC
T ss_pred CCCCcCccChhhhccchHhhhccC
Confidence 999999444456888888876655
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=4.2e-14 Score=150.89 Aligned_cols=107 Identities=27% Similarity=0.322 Sum_probs=54.0
Q ss_pred CCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecccccCcccCchhhhCCCCCCEEeCCC
Q 009965 96 LQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDR 175 (521)
Q Consensus 96 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 175 (521)
|+.|+|++|+|++ +|. |+.+++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|++ +| .|+++++|++|+|++
T Consensus 443 L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~ 517 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCN 517 (567)
T ss_dssp CSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCS
T ss_pred ceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCC
Confidence 4445555555543 333 455555555555555554 444455555555555555555553 34 445555555555555
Q ss_pred CCCCccC-CCCCCCcccccccccccccCCcCcccCCCCCCEEeccCCccccCCc
Q 009965 176 NRLQGAV-PAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP 228 (521)
Q Consensus 176 N~l~g~~-p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~ip 228 (521)
|+|++.. |. .+..+++|+.|+|++|+|++..|
T Consensus 518 N~l~~~~~p~---------------------~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 518 NRLQQSAAIQ---------------------PLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp SCCCSSSTTG---------------------GGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCCCcH---------------------HHhcCCCCCEEEecCCcCCCCcc
Confidence 5554332 21 22345666666777666665544
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.51 E-value=4.2e-14 Score=141.79 Aligned_cols=108 Identities=25% Similarity=0.260 Sum_probs=94.8
Q ss_pred CCccceeeCCCCCCEEEEEecCC-CCCccCCccccCCCCCCEEECcC-CcccccCCccccCCCCCcEEEccCCcCCCCCC
Q 009965 58 CHWTGIACSDARDRVLKINISGS-SLKGFLAPELGLLTYLQELILHG-NNLIGIIPKELGLLKRLKILDLGTNQLTGPIP 135 (521)
Q Consensus 58 c~w~gv~C~~~~~~l~~L~L~~n-~l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p 135 (521)
|.|..|.|. ++ +|++ +|. |..+++|++|+|++ |+|++..|..|..|++|++|+|++|+|++..|
T Consensus 8 C~~~~v~~~------------~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 73 (347)
T 2ifg_A 8 HGSSGLRCT------------RDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAP 73 (347)
T ss_dssp SSSSCEECC------------SSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECT
T ss_pred ccCCEEEcC------------CCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCH
Confidence 777666664 45 7776 777 99999999999996 99999888999999999999999999999999
Q ss_pred cccCCCccCceeecccccCcccCchhhhCCCCCCEEeCCCCCCCc
Q 009965 136 PEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180 (521)
Q Consensus 136 ~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 180 (521)
..|.+|++|++|+|++|+|++..|..|..++ |+.|+|++|.+..
T Consensus 74 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 74 DAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp TGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred HHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 9999999999999999999976666666665 9999999999973
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.51 E-value=9.6e-14 Score=124.85 Aligned_cols=106 Identities=24% Similarity=0.278 Sum_probs=92.0
Q ss_pred CEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecccccCcccCchhhhCCCCCCEEeCCCC
Q 009965 97 QELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRN 176 (521)
Q Consensus 97 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 176 (521)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 78999999997 6787765 89999999999999988999999999999999999999766667899999999999999
Q ss_pred CCCccCCCCCCCcccccccccccccCCcCcccCCCCCCEEeccCCccccC
Q 009965 177 RLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGS 226 (521)
Q Consensus 177 ~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~ 226 (521)
+|+ .+|.. .+..+++|+.|+|++|.+...
T Consensus 92 ~l~-~l~~~--------------------~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 92 HLK-SIPRG--------------------AFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCC-CCCTT--------------------TTTTCTTCSEEECCSSCBCTT
T ss_pred ccc-eeCHH--------------------HhccccCCCEEEeCCCCcccc
Confidence 999 44432 234578899999999999843
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.50 E-value=4.3e-14 Score=127.33 Aligned_cols=133 Identities=20% Similarity=0.158 Sum_probs=106.3
Q ss_pred ccccCCCCCCEEECcCCcccccCCccccCC-CCCcEEEccCCcCCCCCCcccCCCccCceeecccccCcccCchhhhCCC
Q 009965 88 PELGLLTYLQELILHGNNLIGIIPKELGLL-KRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLI 166 (521)
Q Consensus 88 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 166 (521)
+.+..+++|++|+|++|+++. +|. +..+ ++|++|+|++|.+++. ..|..+++|++|+|++|++++..|..|..++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp CEEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred HhcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 457788999999999999994 565 5554 4999999999999965 6899999999999999999966556669999
Q ss_pred CCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcccCCCCCCEEeccCCccccCCccc----c---ccCCCccc
Q 009965 167 SLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKC----L---EYLPSTSF 239 (521)
Q Consensus 167 ~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~ip~~----l---~~l~~l~~ 239 (521)
+|++|+|++|+++ .+|. +..+..+++|+.|++++|.++ .+|.. + .+++.+++
T Consensus 89 ~L~~L~L~~N~i~-~~~~-------------------~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~ 147 (176)
T 1a9n_A 89 DLTELILTNNSLV-ELGD-------------------LDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDF 147 (176)
T ss_dssp TCCEEECCSCCCC-CGGG-------------------GGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETT
T ss_pred CCCEEECCCCcCC-cchh-------------------hHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCC
Confidence 9999999999996 4442 013456788999999999998 55653 4 55666777
Q ss_pred CCCcCC
Q 009965 240 QGNCLQ 245 (521)
Q Consensus 240 ~~N~l~ 245 (521)
++|...
T Consensus 148 ~~n~~~ 153 (176)
T 1a9n_A 148 QKVKLK 153 (176)
T ss_dssp EECCHH
T ss_pred CcCCHH
Confidence 777443
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.40 E-value=4.2e-15 Score=154.85 Aligned_cols=109 Identities=23% Similarity=0.231 Sum_probs=49.3
Q ss_pred CEEEEEecCCCCCc----cCCccccCCCCCCEEECcCCcccccCCccc-cCCC----CCcEEEccCCcCCC----CCCcc
Q 009965 71 RVLKINISGSSLKG----FLAPELGLLTYLQELILHGNNLIGIIPKEL-GLLK----RLKILDLGTNQLTG----PIPPE 137 (521)
Q Consensus 71 ~l~~L~L~~n~l~~----~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~-~~l~----~L~~L~Ls~N~l~g----~~p~~ 137 (521)
+++.|+|++|.++. .++..+..+++|++|+|++|.++...+..+ ..++ +|++|+|++|+++. .+|..
T Consensus 29 ~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~ 108 (461)
T 1z7x_W 29 QCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSST 108 (461)
T ss_dssp TCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred CccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHH
Confidence 34455555555542 233444445555555555555543222222 1222 35555555555542 33444
Q ss_pred cCCCccCceeecccccCcccCchhhh-----CCCCCCEEeCCCCCCC
Q 009965 138 IGNLTGLVKINLQSNGLTGRLPAELG-----NLISLEELHLDRNRLQ 179 (521)
Q Consensus 138 ~~~l~~L~~L~Ls~N~l~g~~p~~~~-----~l~~L~~L~Ls~N~l~ 179 (521)
+..+++|++|+|++|.+++..+..+. ..++|++|+|++|+++
T Consensus 109 l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~ 155 (461)
T 1z7x_W 109 LRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLS 155 (461)
T ss_dssp TTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCB
T ss_pred HccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCC
Confidence 55555555555555555433332222 1334555555555554
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.39 E-value=6.8e-15 Score=153.25 Aligned_cols=175 Identities=19% Similarity=0.169 Sum_probs=117.9
Q ss_pred CCEEEEEecCCCCCcc----CCccccCCCCCCEEECcCCcccccCCcccc-----CCCCCcEEEccCCcCCCC----CCc
Q 009965 70 DRVLKINISGSSLKGF----LAPELGLLTYLQELILHGNNLIGIIPKELG-----LLKRLKILDLGTNQLTGP----IPP 136 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~g~----~p~ 136 (521)
.+++.|+|++|.+++. ++..+..+++|++|+|++|.++...+..+. .+++|++|+|++|.+++. ++.
T Consensus 142 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 221 (461)
T 1z7x_W 142 CRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCG 221 (461)
T ss_dssp CCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHH
T ss_pred CcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHH
Confidence 4689999999998874 355677788999999999988765444443 366888888888888753 566
Q ss_pred ccCCCccCceeecccccCcccC-----chhhhCCCCCCEEeCCCCCCCcc----CCCCCCCcccccccccccccCCcCc-
Q 009965 137 EIGNLTGLVKINLQSNGLTGRL-----PAELGNLISLEELHLDRNRLQGA----VPAGSNSGYTANIHGMYASSANLTG- 206 (521)
Q Consensus 137 ~~~~l~~L~~L~Ls~N~l~g~~-----p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~~~~~~l~~l~l~~n~l~~- 206 (521)
.+..+++|++|+|++|.+++.. +..+..+++|++|+|++|.+++. ++.... ....+..+++++|.++.
T Consensus 222 ~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~--~~~~L~~L~Ls~n~i~~~ 299 (461)
T 1z7x_W 222 IVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLR--AKESLKELSLAGNELGDE 299 (461)
T ss_dssp HHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHH--HCTTCCEEECTTCCCHHH
T ss_pred HHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHh--hCCCcceEECCCCCCchH
Confidence 7777888888888888877532 22233578888888888887743 232110 01356677777777652
Q ss_pred ----cc-----CCCCCCEEeccCCccccC----Ccccc---ccCCCcccCCCcCCC
Q 009965 207 ----LC-----HLSQLKVADFSYNFFVGS----IPKCL---EYLPSTSFQGNCLQN 246 (521)
Q Consensus 207 ----~~-----~l~~L~~L~ls~N~l~g~----ip~~l---~~l~~l~~~~N~l~~ 246 (521)
+. +.++|+.|++++|.+++. +|..+ .+++.+++++|.+.+
T Consensus 300 ~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~ 355 (461)
T 1z7x_W 300 GARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLED 355 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHH
T ss_pred HHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCcccc
Confidence 11 225777888888877654 33332 556667777776554
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.35 E-value=2.3e-12 Score=129.04 Aligned_cols=105 Identities=20% Similarity=0.133 Sum_probs=89.9
Q ss_pred CEEECcCC-cccccCCccccCCCCCcEEEccC-CcCCCCCCcccCCCccCceeecccccCcccCchhhhCCCCCCEEeCC
Q 009965 97 QELILHGN-NLIGIIPKELGLLKRLKILDLGT-NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLD 174 (521)
Q Consensus 97 ~~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 174 (521)
..++++++ +|++ +|. |..+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|..|.+|++|++|+|+
T Consensus 11 ~~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35789998 8984 788 99999999999996 99998888899999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCCCCcccccccccccccCCcCcccCCCCCCEEeccCCcccc
Q 009965 175 RNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVG 225 (521)
Q Consensus 175 ~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g 225 (521)
+|+|+ .+|...+. .++ |+.|+|++|.|..
T Consensus 89 ~N~l~-~~~~~~~~--------------------~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 89 FNALE-SLSWKTVQ--------------------GLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SSCCS-CCCSTTTC--------------------SCC-CCEEECCSSCCCC
T ss_pred CCccc-eeCHHHcc--------------------cCC-ceEEEeeCCCccC
Confidence 99999 45543222 222 8888888888874
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.34 E-value=1.1e-14 Score=133.85 Aligned_cols=110 Identities=22% Similarity=0.229 Sum_probs=98.4
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|+|++|.+++ +| .+..+++|++|+|++|.++ .+|..+..+++|++|+|++|++++ +| .+..+++|++|+|
T Consensus 48 ~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l 122 (198)
T 1ds9_A 48 KACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYM 122 (198)
T ss_dssp TTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEE
T ss_pred CCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEEC
Confidence 579999999999998 66 8999999999999999999 678888888999999999999996 56 6889999999999
Q ss_pred ccccCcccCc-hhhhCCCCCCEEeCCCCCCCccCCC
Q 009965 150 QSNGLTGRLP-AELGNLISLEELHLDRNRLQGAVPA 184 (521)
Q Consensus 150 s~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~ 184 (521)
++|++++..+ ..+..+++|++|++++|.+++.+|.
T Consensus 123 ~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 123 SNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp SEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 9999995332 4799999999999999999877664
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=2.7e-11 Score=116.17 Aligned_cols=138 Identities=14% Similarity=0.060 Sum_probs=104.7
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
...+.|+.+.||++... ++.+++|........ ....+.+|++++..+. |..+.++++++...+ ..++||||+
T Consensus 20 ~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~----~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~--~~~lv~e~i 92 (263)
T 3tm0_A 20 KDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKG----TTYDVEREKDMMLWLEGKLPVPKVLHFERHDG--WSNLLMSEA 92 (263)
T ss_dssp ECCSCCSSSEEEEEECS-SCEEEEEEECGGGTT----STTCHHHHHHHHHHHTTTSCCCCEEEEEEETT--EEEEEEECC
T ss_pred eeccCCCCCeEEEEECC-CCcEEEEeCCcccCC----CHHHHHHHHHHHHHHhcCCCCCeEEEEEecCC--ceEEEEEec
Confidence 56777788899999764 578999987432111 1235888999999884 677889999988765 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC----------------------------------------
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL---------------------------------------- 482 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~---------------------------------------- 482 (521)
++.+|.+... +..+...++.+++++|+.||+..
T Consensus 93 ~G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (263)
T 3tm0_A 93 DGVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFK 165 (263)
T ss_dssp SSEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSS
T ss_pred CCeehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCC
Confidence 9999987642 11223578899999999999810
Q ss_pred ----------------CCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 483 ----------------GPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 483 ----------------~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
.+.++|+|+++.|||++++..+.|.||+.+..-
T Consensus 166 ~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~g 214 (263)
T 3tm0_A 166 DPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRA 214 (263)
T ss_dssp SHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred CHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcccC
Confidence 135899999999999987666679999987543
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.18 E-value=1.1e-10 Score=111.43 Aligned_cols=131 Identities=15% Similarity=0.063 Sum_probs=96.9
Q ss_pred CcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCC--ccceeeEEecCCCCceEEEEecCCC
Q 009965 367 GSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN--TGKLLGYCRESSPFTRMLVFDYASN 444 (521)
Q Consensus 367 g~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~g~~~~~~~~~~~lv~ey~~~ 444 (521)
+.|..+.||++...+|..+++|..... ....+.+|+.++..+++.+ +.+++++....+ ..++||||+++
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~-------~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~--~~~~v~e~i~G 99 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG-------ALNELQDEAARLSWLATTGVPCAAVLDVVTEAG--RDWLLLGEVPG 99 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC-------TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSS--CEEEEEECCSS
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc-------cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCC--CCEEEEEecCC
Confidence 355669999998877888999986322 1124778999999886545 455888877655 68999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC------------------------------------------
Q 009965 445 GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL------------------------------------------ 482 (521)
Q Consensus 445 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------------------------------------------ 482 (521)
.++. .. . .+ ...++.++++.|+.||+..
T Consensus 100 ~~l~--~~-~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (264)
T 1nd4_A 100 QDLL--SS-H----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAE 169 (264)
T ss_dssp EETT--TS-C----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHH
T ss_pred cccC--cC-c----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHH
Confidence 8884 21 1 12 2367888888889888742
Q ss_pred -------------CCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 483 -------------GPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 483 -------------~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
.+.++|+|++|.||+++++..+.|.|||.+....
T Consensus 170 ~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g~ 216 (264)
T 1nd4_A 170 LFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVAD 216 (264)
T ss_dssp HHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEEE
T ss_pred HHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccCC
Confidence 1139999999999999887667799999976543
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.16 E-value=6.9e-11 Score=117.40 Aligned_cols=78 Identities=17% Similarity=0.178 Sum_probs=50.6
Q ss_pred CCEEEEEecCCCCC--------------------ccCCccccC--------CCCCCEEECcCCcccccCCccccCCCCCc
Q 009965 70 DRVLKINISGSSLK--------------------GFLAPELGL--------LTYLQELILHGNNLIGIIPKELGLLKRLK 121 (521)
Q Consensus 70 ~~l~~L~L~~n~l~--------------------~~~p~~l~~--------l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 121 (521)
.+++.|||++|.+. ...+..|.+ +++|+.|+|.+ +++.+-+.+|.++++|+
T Consensus 49 ~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~ 127 (329)
T 3sb4_A 49 PSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLK 127 (329)
T ss_dssp TTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCC
T ss_pred ccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccc
Confidence 46777788777776 112234556 88888888888 77766677788888888
Q ss_pred EEEccCCcCCCCCCcccCCCccCceee
Q 009965 122 ILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 122 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
.|+|++|.++...+..|.++.++..+.
T Consensus 128 ~l~l~~n~i~~i~~~aF~~~~~l~~l~ 154 (329)
T 3sb4_A 128 ICQIRKKTAPNLLPEALADSVTAIFIP 154 (329)
T ss_dssp EEEBCCSSCCEECTTSSCTTTCEEEEC
T ss_pred eEEcCCCCccccchhhhcCCCceEEec
Confidence 888888876544444444444443333
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.14 E-value=5.3e-13 Score=134.90 Aligned_cols=160 Identities=19% Similarity=0.136 Sum_probs=107.5
Q ss_pred CCEEEEEecCCCCCccCCccccC-----CCCCCEEECcCCcccccCCccc-cCCCCCcEEEccCCcCCCCCCccc-----
Q 009965 70 DRVLKINISGSSLKGFLAPELGL-----LTYLQELILHGNNLIGIIPKEL-GLLKRLKILDLGTNQLTGPIPPEI----- 138 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~-----l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~g~~p~~~----- 138 (521)
..++.|+|++|.++......+.. .++|++|+|++|.++..-...+ ..+++|+.|+|++|.++..-...+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 46889999999998644333332 3789999999999875433333 346789999999999874433333
Q ss_pred CCCccCceeecccccCcc----cCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcccCCCCCC
Q 009965 139 GNLTGLVKINLQSNGLTG----RLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLK 214 (521)
Q Consensus 139 ~~l~~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~ 214 (521)
...++|++|+|++|.++. .++..+..+++|++|+|++|.+++.-..... ..+...++|+
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~-----------------~~L~~~~~L~ 214 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLA-----------------AQLDRNRQLQ 214 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHH-----------------HHGGGCSCCC
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHH-----------------HHHhcCCCcC
Confidence 346789999999999974 3555668889999999999998732100000 1123345677
Q ss_pred EEeccCCccccC----Ccccc---ccCCCcccCCCcCCC
Q 009965 215 VADFSYNFFVGS----IPKCL---EYLPSTSFQGNCLQN 246 (521)
Q Consensus 215 ~L~ls~N~l~g~----ip~~l---~~l~~l~~~~N~l~~ 246 (521)
.|+|++|.++.. ++..+ .+|..+++++|.+.+
T Consensus 215 ~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 215 ELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp EEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred eEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 777777777642 22222 556777777776554
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=99.09 E-value=4.5e-10 Score=112.89 Aligned_cols=144 Identities=13% Similarity=0.086 Sum_probs=105.9
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEee--eeccccchhhHHHHHHHHHHHhccC--CCCccceeeEEecCCC-CceEEE
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLC--IKEEHWTGYLELYFQREVADLARIN--HENTGKLLGYCRESSP-FTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~--~~~~~~~~~~~~~~~~E~~~l~~l~--H~niv~l~g~~~~~~~-~~~~lv 438 (521)
+.++.|.++.||+....+ ..+++|+.. ..... .....+.+|..++..++ +..+.++++++.+.+. +..++|
T Consensus 44 ~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~---~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v 119 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLL---PSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI 119 (359)
T ss_dssp EECCC-CCSCEEEEECSS-CEEEEECCCC-------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred EEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCC---CcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence 568899999999998765 567787753 22111 12345788999999886 4567889998876531 247999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC------------------------------------
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL------------------------------------ 482 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------------------------------------ 482 (521)
|||+++..+.+... ..++..++..++.++++.|+.||+..
T Consensus 120 me~v~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 120 MEFVSGRVLWDQSL----PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp EECCCCBCCCCTTC----TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred EEecCCeecCCCcc----ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 99999988754221 23678889999999999999999731
Q ss_pred -------------------CCCeEecCCCCCCeeecCCCC--eeeCCCchhhhc
Q 009965 483 -------------------GPPFTISELNSSAVYLTEDFS--PKVSPLCLSFLL 515 (521)
Q Consensus 483 -------------------~~~ivH~Dlk~~NiLld~~~~--~kl~DfGla~~~ 515 (521)
.+.++|||+++.|||+++++. +.|.||+.+..-
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 247999999999999997753 689999988753
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.00 E-value=1.1e-11 Score=125.28 Aligned_cols=146 Identities=19% Similarity=0.180 Sum_probs=106.8
Q ss_pred CCEEEEEecCCCCCccCCccc-cCCCCCCEEECcCCcccccCCccc-----cCCCCCcEEEccCCcCCC----CCCcccC
Q 009965 70 DRVLKINISGSSLKGFLAPEL-GLLTYLQELILHGNNLIGIIPKEL-----GLLKRLKILDLGTNQLTG----PIPPEIG 139 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l-~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~g----~~p~~~~ 139 (521)
.+++.|+|++|.++..-...+ ..+++|++|+|++|.|+..-...+ ...++|++|+|++|.|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 589999999999975433332 346789999999999985544444 356899999999999863 2445567
Q ss_pred CCccCceeecccccCccc----CchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcccCCCCCCE
Q 009965 140 NLTGLVKINLQSNGLTGR----LPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKV 215 (521)
Q Consensus 140 ~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~ 215 (521)
.+++|++|+|++|.++.. ++..+...++|++|+|++|.++..-..... ..+...++|+.
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~-----------------~~L~~~~~L~~ 243 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALA-----------------RAAREHPSLEL 243 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHH-----------------HHHHHCSSCCE
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHH-----------------HHHHhCCCCCE
Confidence 889999999999999842 456778889999999999999732110000 11234568999
Q ss_pred EeccCCccccCCccccc
Q 009965 216 ADFSYNFFVGSIPKCLE 232 (521)
Q Consensus 216 L~ls~N~l~g~ip~~l~ 232 (521)
|||++|.|+..-...+.
T Consensus 244 L~Ls~N~i~~~g~~~L~ 260 (372)
T 3un9_A 244 LHLYFNELSSEGRQVLR 260 (372)
T ss_dssp EECTTSSCCHHHHHHHH
T ss_pred EeccCCCCCHHHHHHHH
Confidence 99999998755444443
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.87 E-value=9.9e-11 Score=111.70 Aligned_cols=127 Identities=22% Similarity=0.155 Sum_probs=85.2
Q ss_pred CCCCccceeeCCCCCCEEEEEecC---CCCCccCCc-c-----------------------ccCCCCCCE--EECcCCcc
Q 009965 56 DPCHWTGIACSDARDRVLKINISG---SSLKGFLAP-E-----------------------LGLLTYLQE--LILHGNNL 106 (521)
Q Consensus 56 ~~c~w~gv~C~~~~~~l~~L~L~~---n~l~~~~p~-~-----------------------l~~l~~L~~--L~L~~N~l 106 (521)
..|.|.|+.|+....++..+...+ ..+.+.+++ . +...+.|.. ++++.|+.
T Consensus 76 ~l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~ 155 (267)
T 3rw6_A 76 ALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRR 155 (267)
T ss_dssp HHHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHHHHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSH
T ss_pred HHHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHHHHHhccchhccccCHHHcCCCcchhhcCccccCCHH
Confidence 368999999986444665555444 122222221 1 222223333 55666643
Q ss_pred c---ccCCccccCCCCCcEEEccCCcCCC--CCCcccCCCccCceeecccccCcccCchhhhCCC--CCCEEeCCCCCCC
Q 009965 107 I---GIIPKELGLLKRLKILDLGTNQLTG--PIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLI--SLEELHLDRNRLQ 179 (521)
Q Consensus 107 ~---~~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~--~L~~L~Ls~N~l~ 179 (521)
. +.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.++
T Consensus 156 ~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~ 233 (267)
T 3rw6_A 156 SCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLC 233 (267)
T ss_dssp HHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTG
T ss_pred HHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCc
Confidence 2 2222223568999999999999997 5567778899999999999999964 3445454 9999999999999
Q ss_pred ccCCC
Q 009965 180 GAVPA 184 (521)
Q Consensus 180 g~~p~ 184 (521)
+.+|.
T Consensus 234 ~~~~~ 238 (267)
T 3rw6_A 234 DTFRD 238 (267)
T ss_dssp GGCSS
T ss_pred cccCc
Confidence 87763
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=98.85 E-value=1.6e-10 Score=124.10 Aligned_cols=110 Identities=12% Similarity=0.080 Sum_probs=64.2
Q ss_pred CEEEEEecCCCCCccCCccccCC--CCCCEEECcCCc-ccc-cCCccccCCCCCcEEEccCCcCCCC----CCcccCCCc
Q 009965 71 RVLKINISGSSLKGFLAPELGLL--TYLQELILHGNN-LIG-IIPKELGLLKRLKILDLGTNQLTGP----IPPEIGNLT 142 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l--~~L~~L~L~~N~-l~~-~~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~ 142 (521)
+++.|+|++|.+++..+..+..+ .+|++|+|++|. ++. .++.....+++|++|+|++|.+++. ++..+..++
T Consensus 113 ~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~ 192 (592)
T 3ogk_B 113 QLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNT 192 (592)
T ss_dssp TCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCC
T ss_pred CCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCC
Confidence 57777777777665544444442 336666666665 110 1222233566777777777766544 333345566
Q ss_pred cCceeecccccCc----ccCchhhhCCCCCCEEeCCCCCCCc
Q 009965 143 GLVKINLQSNGLT----GRLPAELGNLISLEELHLDRNRLQG 180 (521)
Q Consensus 143 ~L~~L~Ls~N~l~----g~~p~~~~~l~~L~~L~Ls~N~l~g 180 (521)
+|++|+|++|.++ +.++..+.++++|++|+|++|.+.+
T Consensus 193 ~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~ 234 (592)
T 3ogk_B 193 SLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE 234 (592)
T ss_dssp CCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG
T ss_pred CccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH
Confidence 7777777777765 3344445566777777777766653
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.81 E-value=1.5e-08 Score=100.32 Aligned_cols=164 Identities=11% Similarity=0.070 Sum_probs=120.9
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcC----CCCCCccc-------
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQL----TGPIPPEI------- 138 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l----~g~~p~~~------- 138 (521)
.+++.|+|++ .++..-+..|.++++|+.|+|++|.+....+..|..+.++..+.++.+.. ...-+..|
T Consensus 101 ~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~ 179 (329)
T 3sb4_A 101 QTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLE 179 (329)
T ss_dssp TTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCE
T ss_pred CCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccc
Confidence 3789999999 88887777899999999999999999877888888888888877765321 00000000
Q ss_pred -------------------------------------------CCCccCceeecccccCcccCchhhhCCCCCCEEeCCC
Q 009965 139 -------------------------------------------GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDR 175 (521)
Q Consensus 139 -------------------------------------------~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 175 (521)
..+++|+.|+|++|+++...+..|.++++|+.|+|.+
T Consensus 180 ~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~ 259 (329)
T 3sb4_A 180 TTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPH 259 (329)
T ss_dssp EEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCT
T ss_pred eeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCc
Confidence 0267899999999999966667899999999999998
Q ss_pred CCCCccCCCCCCCccccccc-ccccccCCcC-----cccCCCCCCEEeccCCccccCCccccccCCCcc
Q 009965 176 NRLQGAVPAGSNSGYTANIH-GMYASSANLT-----GLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTS 238 (521)
Q Consensus 176 N~l~g~~p~~~~~~~~~~l~-~l~l~~n~l~-----~~~~l~~L~~L~ls~N~l~g~ip~~l~~l~~l~ 238 (521)
| ++ .++...+... .++. .+.+.. +++ .|..+++|+.++++.|+++..-+..|.+++.|.
T Consensus 260 n-i~-~I~~~aF~~~-~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~ 324 (329)
T 3sb4_A 260 N-LK-TIGQRVFSNC-GRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSK 324 (329)
T ss_dssp T-CC-EECTTTTTTC-TTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCC
T ss_pred c-cc-eehHHHhhCC-hhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchh
Confidence 8 66 6777655432 3455 666665 443 366789999999999999855556777665543
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=98.79 E-value=5.5e-10 Score=119.86 Aligned_cols=105 Identities=11% Similarity=0.101 Sum_probs=82.1
Q ss_pred CEEEEEecCCC-CCc-cCCccccCCCCCCEEECcCCccccc----CCccccCCCCCcEEEccCCcCCC----CCCcccCC
Q 009965 71 RVLKINISGSS-LKG-FLAPELGLLTYLQELILHGNNLIGI----IPKELGLLKRLKILDLGTNQLTG----PIPPEIGN 140 (521)
Q Consensus 71 ~l~~L~L~~n~-l~~-~~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g----~~p~~~~~ 140 (521)
+++.|+|+++. ++. .++.....+++|++|+|++|.+++. ++..+..+++|++|+|++|.+++ .++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 49999999886 211 1223345789999999999998765 44456678999999999999973 34455667
Q ss_pred CccCceeecccccCcccCchhhhCCCCCCEEeCCCC
Q 009965 141 LTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRN 176 (521)
Q Consensus 141 l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 176 (521)
+++|+.|+|++|.+.+ +|..+.++++|++|+++.+
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~ 253 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSL 253 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBC
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhccccc
Confidence 8999999999999985 7888999999999999863
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.72 E-value=2.4e-09 Score=102.11 Aligned_cols=80 Identities=24% Similarity=0.248 Sum_probs=68.1
Q ss_pred cCCCCCCEEECcCCcccc--cCCccccCCCCCcEEEccCCcCCCCCCcccCCCc--cCceeecccccCcccCch------
Q 009965 91 GLLTYLQELILHGNNLIG--IIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLT--GLVKINLQSNGLTGRLPA------ 160 (521)
Q Consensus 91 ~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~--~L~~L~Ls~N~l~g~~p~------ 160 (521)
.++++|++|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+++.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 568999999999999998 5567788999999999999999965 4455555 999999999999987763
Q ss_pred -hhhCCCCCCEEe
Q 009965 161 -ELGNLISLEELH 172 (521)
Q Consensus 161 -~~~~l~~L~~L~ 172 (521)
.+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 477899999987
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=98.63 E-value=1.7e-09 Score=116.03 Aligned_cols=107 Identities=16% Similarity=0.153 Sum_probs=78.0
Q ss_pred CCEEEEEecCCCCCccCCcccc-CCCCCCEEECcCC-ccccc-CCccccCCCCCcEEEccCCcCCCCCCcccC----CCc
Q 009965 70 DRVLKINISGSSLKGFLAPELG-LLTYLQELILHGN-NLIGI-IPKELGLLKRLKILDLGTNQLTGPIPPEIG----NLT 142 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~----~l~ 142 (521)
.+++.|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+..+++|++|+|++|.+++..+..+. .++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 4788999999988877666665 6889999999988 55432 444455789999999999988765554443 567
Q ss_pred cCceeeccccc--Ccc-cCchhhhCCCCCCEEeCCCC
Q 009965 143 GLVKINLQSNG--LTG-RLPAELGNLISLEELHLDRN 176 (521)
Q Consensus 143 ~L~~L~Ls~N~--l~g-~~p~~~~~l~~L~~L~Ls~N 176 (521)
+|+.|+|++|. ++. .++..+.++++|++|+|++|
T Consensus 185 ~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~ 221 (594)
T 2p1m_B 185 SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRA 221 (594)
T ss_dssp CCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTT
T ss_pred cCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCC
Confidence 89999998886 221 12223355788999999887
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.54 E-value=2.8e-09 Score=96.45 Aligned_cols=91 Identities=21% Similarity=0.170 Sum_probs=45.8
Q ss_pred cccCCCCCCEEECcCC-ccccc----CCccccCCCCCcEEEccCCcCCCC----CCcccCCCccCceeecccccCccc--
Q 009965 89 ELGLLTYLQELILHGN-NLIGI----IPKELGLLKRLKILDLGTNQLTGP----IPPEIGNLTGLVKINLQSNGLTGR-- 157 (521)
Q Consensus 89 ~l~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~-- 157 (521)
.+...+.|++|+|++| .+... +...+...++|++|+|++|.+... +...+...++|++|+|++|.++..
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 3444555555555555 55421 223344455566666666655421 122233345566666666665532
Q ss_pred --CchhhhCCCCCCEEeC--CCCCCC
Q 009965 158 --LPAELGNLISLEELHL--DRNRLQ 179 (521)
Q Consensus 158 --~p~~~~~l~~L~~L~L--s~N~l~ 179 (521)
+...+...++|++|+| ++|.++
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCC
Confidence 3344455556666666 556554
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.53 E-value=1.3e-08 Score=92.08 Aligned_cols=111 Identities=17% Similarity=0.234 Sum_probs=88.8
Q ss_pred CCCEEEEEecCC-CCCcc----CCccccCCCCCCEEECcCCccccc----CCccccCCCCCcEEEccCCcCCCC----CC
Q 009965 69 RDRVLKINISGS-SLKGF----LAPELGLLTYLQELILHGNNLIGI----IPKELGLLKRLKILDLGTNQLTGP----IP 135 (521)
Q Consensus 69 ~~~l~~L~L~~n-~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p 135 (521)
...++.|+|++| .+... +...+...+.|++|+|++|.|... +...+...++|++|+|++|.|+.. +.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 457999999999 88742 445677789999999999999742 344566678999999999999743 45
Q ss_pred cccCCCccCceeec--ccccCccc----CchhhhCCCCCCEEeCCCCCCC
Q 009965 136 PEIGNLTGLVKINL--QSNGLTGR----LPAELGNLISLEELHLDRNRLQ 179 (521)
Q Consensus 136 ~~~~~l~~L~~L~L--s~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~ 179 (521)
..+...++|++|+| ++|.++.. +...+...++|++|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 66777889999999 88999853 4455667799999999999885
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.53 E-value=2.6e-07 Score=90.38 Aligned_cols=139 Identities=15% Similarity=0.052 Sum_probs=98.0
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCC--ccceeeEEecCCC-CceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHEN--TGKLLGYCRESSP-FTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~n--iv~l~g~~~~~~~-~~~~lv~ 439 (521)
+.++.|.+..||+.. ..+++|+... ......+.+|.+++..+ ++.. +.+++++...... ...|+||
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~------~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm 95 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKH------SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGF 95 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESS------HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEE
T ss_pred EecCCCCcceEEEEC----CEEEEEecCC------cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEE
Confidence 457889999999863 4578887421 12345688999999888 3433 3344444433221 1358999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC--------------------------------------
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTE-------------------------------------- 481 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-------------------------------------- 481 (521)
||+++.++.+... ..++..++..++.++++.++.||+.
T Consensus 96 ~~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (304)
T 3sg8_A 96 TKIKGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMK 171 (304)
T ss_dssp ECCCCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred cccCCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHH
Confidence 9999988875432 1367778888899999999888861
Q ss_pred -----------------CCCCeEecCCCCCCeeecC--CCCeeeCCCchhhhcc
Q 009965 482 -----------------LGPPFTISELNSSAVYLTE--DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 482 -----------------~~~~ivH~Dlk~~NiLld~--~~~~kl~DfGla~~~~ 516 (521)
..+.++|+|+++.||++++ ...+.|.||+.+..-+
T Consensus 172 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~ 225 (304)
T 3sg8_A 172 KVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISD 225 (304)
T ss_dssp HHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEEC
T ss_pred HHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCC
Confidence 1246899999999999998 4567899999887543
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.50 E-value=4e-08 Score=98.43 Aligned_cols=174 Identities=16% Similarity=0.116 Sum_probs=95.4
Q ss_pred CCEEEEEecCCCCCc-c-------CCccccCCCCCCEEECcCCccc---------ccCCccccCCCCCcEEEccCCcCCC
Q 009965 70 DRVLKINISGSSLKG-F-------LAPELGLLTYLQELILHGNNLI---------GIIPKELGLLKRLKILDLGTNQLTG 132 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~-~-------~p~~l~~l~~L~~L~L~~N~l~---------~~~p~~~~~l~~L~~L~Ls~N~l~g 132 (521)
.+|+.|.+......| . +..++..+++|+.|.+..+... +.++..+..+++|+.|+|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l- 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL- 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-
Confidence 356677766555442 1 1233456677777777654321 123344556777888888776311
Q ss_pred CCCcccCCCccCceeecccccCcccCchhhh--CCCCCCEEeCCC--CCCCcc--C---CCCCCCcccccccccccccCC
Q 009965 133 PIPPEIGNLTGLVKINLQSNGLTGRLPAELG--NLISLEELHLDR--NRLQGA--V---PAGSNSGYTANIHGMYASSAN 203 (521)
Q Consensus 133 ~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~l~~L~~L~Ls~--N~l~g~--~---p~~~~~~~~~~l~~l~l~~n~ 203 (521)
.+|. + .+++|+.|+|..|.++......++ .+++|++|+|+. |...|. + .........++|..+.+..|.
T Consensus 186 ~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~ 263 (362)
T 2ra8_A 186 SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAE 263 (362)
T ss_dssp BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCT
T ss_pred eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCC
Confidence 2333 3 267788888877776644334444 577788877753 221111 0 000000112356666666665
Q ss_pred cCc-----c---cCCCCCCEEeccCCccccC----Ccc---ccccCCCcccCCCcCCC
Q 009965 204 LTG-----L---CHLSQLKVADFSYNFFVGS----IPK---CLEYLPSTSFQGNCLQN 246 (521)
Q Consensus 204 l~~-----~---~~l~~L~~L~ls~N~l~g~----ip~---~l~~l~~l~~~~N~l~~ 246 (521)
+.. + ..+++|+.|||++|.+.+. ++. .+.+|+.|++++|++.+
T Consensus 264 i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 264 EQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp THHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred CchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 542 1 2356788888888887653 232 24567777777776543
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=98.50 E-value=2.1e-09 Score=115.27 Aligned_cols=111 Identities=11% Similarity=0.052 Sum_probs=81.1
Q ss_pred CCEEEEEecC---------CCCCccCCcccc-CCCCCCEEECcCCcccccCCcccc-CCCCCcEEEcc--C----CcCCC
Q 009965 70 DRVLKINISG---------SSLKGFLAPELG-LLTYLQELILHGNNLIGIIPKELG-LLKRLKILDLG--T----NQLTG 132 (521)
Q Consensus 70 ~~l~~L~L~~---------n~l~~~~p~~l~-~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls--~----N~l~g 132 (521)
.+++.|+|.+ +.+++.....+. .+++|++|+++.|++++..+..+. .+++|+.|+|+ + |.++.
T Consensus 338 ~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~ 417 (594)
T 2p1m_B 338 KDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTL 417 (594)
T ss_dssp TTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTC
T ss_pred CCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccC
Confidence 4789999943 455543223333 489999999999999876666665 58999999999 4 56653
Q ss_pred CC-----CcccCCCccCceeecccccCcccCchhhhC-CCCCCEEeCCCCCCCcc
Q 009965 133 PI-----PPEIGNLTGLVKINLQSNGLTGRLPAELGN-LISLEELHLDRNRLQGA 181 (521)
Q Consensus 133 ~~-----p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~-l~~L~~L~Ls~N~l~g~ 181 (521)
.. +..+..+++|+.|+|++ .+++..+..++. +++|++|+|++|.+++.
T Consensus 418 ~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~ 471 (594)
T 2p1m_B 418 EPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDL 471 (594)
T ss_dssp CCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHH
T ss_pred CchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHH
Confidence 21 12256788999999977 777666666766 89999999999998743
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=98.48 E-value=5.7e-07 Score=86.15 Aligned_cols=138 Identities=13% Similarity=0.018 Sum_probs=96.1
Q ss_pred chhCcCCCe-eEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCCccceeeEEecCCCCceEEEEe
Q 009965 364 NIIGSSPDS-LVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~ig~G~~g-~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
+.+..|..+ .||+.... ++..+.+|+-.. .....+.+|...|..+. +--+.++++++.+.+ ..++|||
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~-------~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~--~~~lvme 100 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKG-------SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPD--DAWLLTT 100 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEET-------HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETT--EEEEEEE
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCC-------CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECC--eEEEEEE
Confidence 345556555 68998776 456788887421 12346788999988773 334677888888766 7899999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--------------------------------------
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL-------------------------------------- 482 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-------------------------------------- 482 (521)
++++.++.+.... ....+..++.++++.|+-||...
T Consensus 101 ~l~G~~~~~~~~~------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (272)
T 4gkh_A 101 AIPGKTAFQVLEE------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGW 174 (272)
T ss_dssp CCCSEEHHHHHHH------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTC
T ss_pred eeCCccccccccC------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccch
Confidence 9999887765421 11223456666666677666421
Q ss_pred -----------------CCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 483 -----------------GPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 483 -----------------~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
.+.++|+|+.+.|||+++++.+-|.||+.+..-+
T Consensus 175 ~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~gd 225 (272)
T 4gkh_A 175 PVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIAD 225 (272)
T ss_dssp CHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEEE
T ss_pred HHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccccCC
Confidence 1238999999999999988777899999876543
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.40 E-value=6.5e-08 Score=96.87 Aligned_cols=171 Identities=20% Similarity=0.196 Sum_probs=98.9
Q ss_pred CCEEEEEecCCCCC---------ccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccC-
Q 009965 70 DRVLKINISGSSLK---------GFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIG- 139 (521)
Q Consensus 70 ~~l~~L~L~~n~l~---------~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~- 139 (521)
++++.|.+.++... +.++..+..+++|+.|+|++|.-. .+|. +. +++|+.|+|..|.++...-..+.
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~ 215 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILG 215 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHH
T ss_pred chhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHH
Confidence 46777777655431 124445567788888888776311 2333 33 77888888877766532222332
Q ss_pred -CCccCceeeccc--ccCccc-----Cchhh--hCCCCCCEEeCCCCCCCccCCCCCC-CcccccccccccccCCcCc--
Q 009965 140 -NLTGLVKINLQS--NGLTGR-----LPAEL--GNLISLEELHLDRNRLQGAVPAGSN-SGYTANIHGMYASSANLTG-- 206 (521)
Q Consensus 140 -~l~~L~~L~Ls~--N~l~g~-----~p~~~--~~l~~L~~L~Ls~N~l~g~~p~~~~-~~~~~~l~~l~l~~n~l~~-- 206 (521)
.+++|+.|+|+. |...+. +...+ ..+++|++|+|++|.+.+..+.... ......+..++++.|.+..
T Consensus 216 ~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G 295 (362)
T 2ra8_A 216 SDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEG 295 (362)
T ss_dssp SBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHH
T ss_pred ccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHH
Confidence 577888887753 222111 11122 2467888888888877643221100 0113467777888777754
Q ss_pred -------ccCCCCCCEEeccCCccccCCcccccc-C-CCcccCCCc
Q 009965 207 -------LCHLSQLKVADFSYNFFVGSIPKCLEY-L-PSTSFQGNC 243 (521)
Q Consensus 207 -------~~~l~~L~~L~ls~N~l~g~ip~~l~~-l-~~l~~~~N~ 243 (521)
+.++++|+.|++++|.++...-..+.. + ..+++++|.
T Consensus 296 ~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~alg~~~~~~~~~ 341 (362)
T 2ra8_A 296 ARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSLPMKIDVSDSQ 341 (362)
T ss_dssp HHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHCCSEEECCSBC
T ss_pred HHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHcCCEEEecCCc
Confidence 245789999999999887543333433 3 346666664
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=98.37 E-value=2.5e-06 Score=86.72 Aligned_cols=168 Identities=12% Similarity=0.103 Sum_probs=94.6
Q ss_pred EEEEEecCCCCCccCCccccCCCCCCEEECcCCcccc----------------------cCCccccCCCCCcEEEccCCc
Q 009965 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIG----------------------IIPKELGLLKRLKILDLGTNQ 129 (521)
Q Consensus 72 l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~----------------------~~p~~~~~l~~L~~L~Ls~N~ 129 (521)
++.++|.+ .++..-+..|.++++|+.++|++|+++. +-..+|.++++|+.++|..|
T Consensus 159 L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~~~~L~~l~lp~~l~~I~~~aF~~~~~L~~l~l~~~- 236 (401)
T 4fdw_A 159 VQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFVYAGIEEVLLPVTLKEIGSQAFLKTSQLKTIEIPEN- 236 (401)
T ss_dssp CCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTTTCCCSEEECCTTCCEECTTTTTTCTTCCCEECCTT-
T ss_pred ceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEeecccCEEEeCCchheehhhHhhCCCCCCEEecCCC-
Confidence 44555543 4444334445555555555555555443 33344455555555555443
Q ss_pred CCCCCCcccCCCccCceeecccccCcccCchhhhCCCCCCEEeCCCCCCC----ccCCCCCCCcccccccccccccCCcC
Q 009965 130 LTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ----GAVPAGSNSGYTANIHGMYASSANLT 205 (521)
Q Consensus 130 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~----g~~p~~~~~~~~~~l~~l~l~~n~l~ 205 (521)
++..-...|.+ .+|+.++| .|.++..-+.+|.++++|+.+++.+|.+. ..++...+.. ..+|..+.+.. .++
T Consensus 237 l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~-c~~L~~l~l~~-~i~ 312 (401)
T 4fdw_A 237 VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEG-CPKLARFEIPE-SIR 312 (401)
T ss_dssp CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTT-CTTCCEECCCT-TCC
T ss_pred ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhC-CccCCeEEeCC-ceE
Confidence 33222333444 45555555 34455445678899999999999988775 1355444332 23566666663 343
Q ss_pred -----cccCCCCCCEEeccCCccccCCccccc--cCCCcccCCCcCCC
Q 009965 206 -----GLCHLSQLKVADFSYNFFVGSIPKCLE--YLPSTSFQGNCLQN 246 (521)
Q Consensus 206 -----~~~~l~~L~~L~ls~N~l~g~ip~~l~--~l~~l~~~~N~l~~ 246 (521)
.|..+++|+.+++..| ++..-+.+|. +|+.+.+.+|.+..
T Consensus 313 ~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~~L~~l~l~~n~~~~ 359 (401)
T 4fdw_A 313 ILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNTGIKEVKVEGTTPPQ 359 (401)
T ss_dssp EECTTTTTTCCSCCEEEECTT-CCEECTTSSSSSCCCEEEECCSSCCB
T ss_pred EEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCCCCCEEEEcCCCCcc
Confidence 3566789999999666 5422233343 56778888885544
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.37 E-value=2.8e-06 Score=83.08 Aligned_cols=138 Identities=8% Similarity=-0.035 Sum_probs=93.1
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCC---CccceeeEEecCCCCceEEEEe
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHE---NTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~g~~~~~~~~~~~lv~e 440 (521)
+.++.|....||+. +..+++|+-. .......+.+|.+++..+++. .+.+++.++.... ...++|||
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~------~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~-g~~~~v~e 93 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPK------SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSD-GNPFVGYR 93 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEES------SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTT-SCEEEEEE
T ss_pred eecCCCcceeEEEE----CCEEEEEecC------CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCC-CceEEEEe
Confidence 45778888899988 4567787631 112345789999999999653 3556677765222 25789999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC---------------------------------------
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTE--------------------------------------- 481 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~--------------------------------------- 481 (521)
|+++.++.+.... .++..++..++.++++.|+.||+.
T Consensus 94 ~i~G~~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~ 169 (306)
T 3tdw_A 94 KVQGQILGEDGMA----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLR 169 (306)
T ss_dssp CCCSEECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred ccCCeECchhhhh----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhH
Confidence 9999887653211 134445555555555555555542
Q ss_pred ------------------CCCCeEecCCCCCCeeecC---CCC-eeeCCCchhhhcc
Q 009965 482 ------------------LGPPFTISELNSSAVYLTE---DFS-PKVSPLCLSFLLV 516 (521)
Q Consensus 482 ------------------~~~~ivH~Dlk~~NiLld~---~~~-~kl~DfGla~~~~ 516 (521)
..+.++|+|+++.||++++ ++. +.|.||+.+..-+
T Consensus 170 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd 226 (306)
T 3tdw_A 170 DYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISD 226 (306)
T ss_dssp HHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEEC
T ss_pred HHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCCC
Confidence 2335799999999999987 455 4899999876544
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=98.37 E-value=2.2e-06 Score=87.12 Aligned_cols=144 Identities=14% Similarity=0.122 Sum_probs=95.3
Q ss_pred CEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecc
Q 009965 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
+++.++|..+ ++..-...|.+ .+|+.++|.+ .++.+-+.+|.++++|+.++|++|+++......|. .++|+.+.|.
T Consensus 136 ~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp 211 (401)
T 4fdw_A 136 QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLP 211 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECC
T ss_pred CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeC
Confidence 4666676655 55544555666 4688888875 66666667788888888888888888743334444 5788888887
Q ss_pred cccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcC-----cccCCCCCCEEeccCCccc
Q 009965 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT-----GLCHLSQLKVADFSYNFFV 224 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~-----~~~~l~~L~~L~ls~N~l~ 224 (521)
.| ++..-..+|.++++|+.+++..| ++ .++...+.. ..+..+.+. +.++ .|..+++|+.+++.+|.+.
T Consensus 212 ~~-l~~I~~~aF~~~~~L~~l~l~~~-l~-~I~~~aF~~--~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~ 284 (401)
T 4fdw_A 212 VT-LKEIGSQAFLKTSQLKTIEIPEN-VS-TIGQEAFRE--SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFN 284 (401)
T ss_dssp TT-CCEECTTTTTTCTTCCCEECCTT-CC-EECTTTTTT--CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCC
T ss_pred Cc-hheehhhHhhCCCCCCEEecCCC-cc-Ccccccccc--CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCcccc
Confidence 44 66556677888888888888865 44 555544443 344555552 2232 3556778888888777664
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=98.22 E-value=5.7e-06 Score=82.60 Aligned_cols=85 Identities=7% Similarity=-0.030 Sum_probs=53.5
Q ss_pred chh-CcCCCeeEEEEEeC-------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-C--CCccceeeEEecCCC
Q 009965 364 NII-GSSPDSLVYKGTMK-------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-H--ENTGKLLGYCRESSP 432 (521)
Q Consensus 364 ~~i-g~G~~g~Vy~~~~~-------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H--~niv~l~g~~~~~~~ 432 (521)
+.| +.|....+|+.... ++..+++|+....... .......+.+|+.++..++ + -.+.++++++.+.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~-~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDV-PVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGC-CSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCcc-ccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 456 78888999998765 2566778765321100 0000124677888888774 2 356778888765421
Q ss_pred -CceEEEEecCCCCChhh
Q 009965 433 -FTRMLVFDYASNGTLYE 449 (521)
Q Consensus 433 -~~~~lv~ey~~~gsL~~ 449 (521)
...++||||+++..+.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 24689999999877654
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=3.8e-05 Score=77.85 Aligned_cols=78 Identities=10% Similarity=-0.044 Sum_probs=47.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeecc---ccchhhHHHHHHHHHHHhccCC--CCcc-ceeeEEecCCCCceE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEE---HWTGYLELYFQREVADLARINH--ENTG-KLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~---~~~~~~~~~~~~E~~~l~~l~H--~niv-~l~g~~~~~~~~~~~ 436 (521)
+.+|.|.++.||+++.. +++.++||....... ........++..|.+++..+.. +..+ +++.+. .. ..+
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~--~~~ 111 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TE--MAV 111 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TT--TTE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CC--ccE
Confidence 57899999999999865 567899997642211 0000122356778888887742 3333 455442 22 468
Q ss_pred EEEecCCCC
Q 009965 437 LVFDYASNG 445 (521)
Q Consensus 437 lv~ey~~~g 445 (521)
+||||+++.
T Consensus 112 lvmE~l~g~ 120 (397)
T 2olc_A 112 TVMEDLSHL 120 (397)
T ss_dssp EEECCCTTS
T ss_pred EEEEeCCCc
Confidence 999999763
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=97.83 E-value=9.4e-05 Score=72.18 Aligned_cols=136 Identities=15% Similarity=0.097 Sum_probs=89.0
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC---CCCccceeeEEecCCCCceEEEEe
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN---HENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
+.|+.|....+|+... ++..+++|+.... ....|..|.+.|..+. ...+.++++++...+ ..++|||
T Consensus 42 ~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~-------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g--~~~lvme 111 (312)
T 3jr1_A 42 EKLYSGEMNEIWLIND-EVQTVFVKINERS-------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQG--HSFLLLE 111 (312)
T ss_dssp EEECCSSSSEEEEEES-SSCEEEEEEEEGG-------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSS--EEEEEEE
T ss_pred EEeCCccceeeeEEEE-CCCeEEEEeCCcc-------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCC--ceEEEEE
Confidence 4578899999999876 4567888875321 2356888998888873 356788888887655 7899999
Q ss_pred cCCCCChhh-----------hhccCCC-C-------------------CCCHHHHH---HHH--HH--------------
Q 009965 441 YASNGTLYE-----------HLHYGER-C-------------------QVSWTRRM---KIV--IG-------------- 470 (521)
Q Consensus 441 y~~~gsL~~-----------~l~~~~~-~-------------------~l~~~~~~---~i~--~~-------------- 470 (521)
|+++..+.. .||.... . .-+|..-. ++. .+
T Consensus 112 ~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~ 191 (312)
T 3jr1_A 112 ALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDL 191 (312)
T ss_dssp CCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHH
T ss_pred eccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHH
Confidence 999876531 1232111 0 12565321 111 11
Q ss_pred HHHH-HHHHh-cCCCCCeEecCCCCCCeeecCCCCeeeCCCc
Q 009965 471 IARG-LKYLH-TELGPPFTISELNSSAVYLTEDFSPKVSPLC 510 (521)
Q Consensus 471 ia~g-L~yLH-~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfG 510 (521)
+.+. ...|. ....|.++|+|+.+.|++++.++ +.|.||.
T Consensus 192 l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 192 IVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1111 22342 12357899999999999999887 8999984
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.81 E-value=6.9e-05 Score=73.91 Aligned_cols=44 Identities=16% Similarity=0.011 Sum_probs=34.3
Q ss_pred HHHHHHHHhc----------CCCCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 471 IARGLKYLHT----------ELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 471 ia~gL~yLH~----------~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
+.+++++|+. ...+.++|+|+.+.|||++.++.+.|.||+.+..
T Consensus 199 ~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 199 GLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 3446677763 1245899999999999998888899999997753
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00013 Score=70.28 Aligned_cols=74 Identities=18% Similarity=0.240 Sum_probs=51.1
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCC---CCccceeeEEecCCCCceEEEEe
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH---ENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H---~niv~l~g~~~~~~~~~~~lv~e 440 (521)
+.+|.|..+.||+.+..||+.+.+|+-..... .....|..|.+.|+.+.- --+.+++++. ..++|||
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~----~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~------~~~lv~e 90 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAP----ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD------DRTLAME 90 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCC----CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE------TTEEEEE
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCc----chhhHHHHHHHHHHHHHhhCCCCcceEEecc------CceEEEE
Confidence 46788999999999999999999997532211 122357889998888742 1234445442 2479999
Q ss_pred cCCCCCh
Q 009965 441 YASNGTL 447 (521)
Q Consensus 441 y~~~gsL 447 (521)
|++.+..
T Consensus 91 ~l~~~~~ 97 (288)
T 3f7w_A 91 WVDERPP 97 (288)
T ss_dssp CCCCCCC
T ss_pred eecccCC
Confidence 9987643
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.65 E-value=1.4e-05 Score=70.66 Aligned_cols=81 Identities=15% Similarity=0.187 Sum_probs=37.7
Q ss_pred CCEEECcCCcccccCCccccCCCCCcEEEccCCc-CCCCCCcccCCC----ccCceeeccccc-CcccCchhhhCCCCCC
Q 009965 96 LQELILHGNNLIGIIPKELGLLKRLKILDLGTNQ-LTGPIPPEIGNL----TGLVKINLQSNG-LTGRLPAELGNLISLE 169 (521)
Q Consensus 96 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l----~~L~~L~Ls~N~-l~g~~p~~~~~l~~L~ 169 (521)
|++|||+++.++..--..+..+++|+.|+|+++. ++..-=..+..+ ++|++|+|++|. +|..--..+..+++|+
T Consensus 63 L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~ 142 (176)
T 3e4g_A 63 IQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNLK 142 (176)
T ss_dssp EEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTCC
T ss_pred EeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCCC
Confidence 4444444444432222234455555555555553 332111122222 246666666653 5532223455666777
Q ss_pred EEeCCCC
Q 009965 170 ELHLDRN 176 (521)
Q Consensus 170 ~L~Ls~N 176 (521)
+|+|+++
T Consensus 143 ~L~L~~c 149 (176)
T 3e4g_A 143 YLFLSDL 149 (176)
T ss_dssp EEEEESC
T ss_pred EEECCCC
Confidence 7777665
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00045 Score=70.43 Aligned_cols=32 Identities=22% Similarity=0.274 Sum_probs=27.5
Q ss_pred CCCeEecCCCCCCeeecCCCCeeeCCCchhhhc
Q 009965 483 GPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515 (521)
Q Consensus 483 ~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~ 515 (521)
.+.++|+|+++.|||+++++ ++|.||+.+..-
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G 262 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYG 262 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEE
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccC
Confidence 34899999999999998876 999999887643
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.42 E-value=3.7e-05 Score=67.94 Aligned_cols=86 Identities=13% Similarity=0.105 Sum_probs=65.1
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCc-ccccCCccccCC----CCCcEEEccCCc-CCCCCCcccCCCcc
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNN-LIGIIPKELGLL----KRLKILDLGTNQ-LTGPIPPEIGNLTG 143 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~g~~p~~~~~l~~ 143 (521)
-+++.|||+++.++..--..+..+++|++|+|++|. ++..-=..+..+ ++|++|+|+++. ++..-=..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 479999999999875444567899999999999995 664322335554 479999999985 66332245678999
Q ss_pred Cceeeccccc-Cc
Q 009965 144 LVKINLQSNG-LT 155 (521)
Q Consensus 144 L~~L~Ls~N~-l~ 155 (521)
|++|+|+++. ++
T Consensus 141 L~~L~L~~c~~It 153 (176)
T 3e4g_A 141 LKYLFLSDLPGVK 153 (176)
T ss_dssp CCEEEEESCTTCC
T ss_pred CCEEECCCCCCCC
Confidence 9999999985 44
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0014 Score=64.42 Aligned_cols=32 Identities=9% Similarity=0.026 Sum_probs=27.4
Q ss_pred CCCeEecCCCCCCeeecCC----CCeeeCCCchhhh
Q 009965 483 GPPFTISELNSSAVYLTED----FSPKVSPLCLSFL 514 (521)
Q Consensus 483 ~~~ivH~Dlk~~NiLld~~----~~~kl~DfGla~~ 514 (521)
.+.++|||+.+.|||++++ ..+.|.||+.+..
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 4579999999999999875 6789999998764
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0032 Score=61.29 Aligned_cols=156 Identities=10% Similarity=0.064 Sum_probs=85.3
Q ss_pred cCHHHHHHHHhhhh-------chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCC--c
Q 009965 350 FSRQELEVACEDFS-------NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN--T 420 (521)
Q Consensus 350 ~~~~~l~~~~~~~~-------~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n--i 420 (521)
++.+++......|. +.|+.|....+|+....+| .+++|...... ....+..|+.++..++... +
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~------~~~~l~~e~~~l~~L~~~g~~v 79 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV------EKNDLPFFLGLMQHLAAKGLSC 79 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC---------CCHHHHHHHHHHHHHHTTCCC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC------CHHHHHHHHHHHHHHHHCCCCC
Confidence 44455555544443 3466788889999988766 57788764311 1124566777777663222 2
Q ss_pred cceeeEE------ecCCCCceEEEEecCCCCChhh--------------hhcc---C--CC-----CCCCHHHHHHH---
Q 009965 421 GKLLGYC------RESSPFTRMLVFDYASNGTLYE--------------HLHY---G--ER-----CQVSWTRRMKI--- 467 (521)
Q Consensus 421 v~l~g~~------~~~~~~~~~lv~ey~~~gsL~~--------------~l~~---~--~~-----~~l~~~~~~~i--- 467 (521)
.+++... ...+ ..++++||+++..+.. .+|. . .. ....|.....-
T Consensus 80 P~~~~~~~g~~~~~~~g--~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 157 (322)
T 2ppq_A 80 PLPLPRKDGELLGELSG--RPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEE 157 (322)
T ss_dssp CCBCCBTTCCSCEEETT--EEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGG
T ss_pred CcccCCCCCCEEEEECC--EEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHH
Confidence 3333211 1112 5689999998765421 1221 0 00 00134432111
Q ss_pred ---------HHHHHHHHHHHhcC----CCCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 468 ---------VIGIARGLKYLHTE----LGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 468 ---------~~~ia~gL~yLH~~----~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
...+.+.++++++. ..+.++|+|+.+.|||++++..+.|.||+.+..
T Consensus 158 ~~~~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 158 RADEVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp GGGGTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHhhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 11244556666532 234799999999999999876668999987653
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00072 Score=56.74 Aligned_cols=56 Identities=29% Similarity=0.420 Sum_probs=29.4
Q ss_pred EEEccCCcCC-CCCCcccCCCccCceeecccccCcccCchhhhCCCCCCEEeCCCCCCC
Q 009965 122 ILDLGTNQLT-GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179 (521)
Q Consensus 122 ~L~Ls~N~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 179 (521)
.++.+++.++ ..+|..+. ++|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4444455443 23333221 24556666666666444445566666666666666553
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0058 Score=59.63 Aligned_cols=155 Identities=9% Similarity=0.017 Sum_probs=85.6
Q ss_pred cCHHHHHHHHhhhh-------chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCC--Cc
Q 009965 350 FSRQELEVACEDFS-------NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHE--NT 420 (521)
Q Consensus 350 ~~~~~l~~~~~~~~-------~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~--ni 420 (521)
.+.+++......+. ..++ |....||+....+|+.+++|....... ....+..|..++..++.. .+
T Consensus 11 l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-----~~~~~~~E~~~~~~L~~~g~~v 84 (328)
T 1zyl_A 11 LHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERW-----TADQILEEHQFALQLVNDEVPV 84 (328)
T ss_dssp CCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTS-----CHHHHHHHHHHHHHHHHTTCSB
T ss_pred CCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCC-----CHHHHHHHHHHHHHHHHcCCee
Confidence 44555555554443 2355 777889998877777788988742211 133566788877777422 24
Q ss_pred cceeeE-----EecCCCCceEEEEecCCCCChhh-----h---------hcc---C----CCCCCCHHHH----HHH---
Q 009965 421 GKLLGY-----CRESSPFTRMLVFDYASNGTLYE-----H---------LHY---G----ERCQVSWTRR----MKI--- 467 (521)
Q Consensus 421 v~l~g~-----~~~~~~~~~~lv~ey~~~gsL~~-----~---------l~~---~----~~~~l~~~~~----~~i--- 467 (521)
.+++.. ....+ ..+++|||+++..+.. + +|. . ....+++... ..+
T Consensus 85 p~~~~~~g~~~~~~~g--~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 162 (328)
T 1zyl_A 85 AAPVAFNGQTLLNHQG--FYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFED 162 (328)
T ss_dssp CCCCCBTTBSCEEETT--EEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHT
T ss_pred cceeecCCcEEEEECC--EEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhh
Confidence 445443 01112 4678999998754321 1 121 0 0112333211 001
Q ss_pred ------------HHHHHHHHHHHhcC----CCCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 468 ------------VIGIARGLKYLHTE----LGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 468 ------------~~~ia~gL~yLH~~----~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
...+.+.++.+... ..+.++|+|+++.|||++ + .+.|.||+.+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 163 ATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred cCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 11111223333221 234689999999999999 4 899999987654
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0015 Score=65.77 Aligned_cols=110 Identities=13% Similarity=0.185 Sum_probs=57.2
Q ss_pred cccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecccccCcccCchhhhCCCCC
Q 009965 89 ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISL 168 (521)
Q Consensus 89 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 168 (521)
.|.+++.|+.+.+..+..+ .-...|.++++|+.+.+. +.++..-...|.++.+|+.++|..+ ++..-..+|.++.+|
T Consensus 260 aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L 336 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQL 336 (394)
T ss_dssp TTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTC
T ss_pred eeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCC
Confidence 3455566666666544332 334455566666666664 3344233345556666666666543 443334456666666
Q ss_pred CEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcccCCCCCCEEeccCCcc
Q 009965 169 EELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFF 223 (521)
Q Consensus 169 ~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l 223 (521)
+.+.+..+ ++ .|+. ..|.++++|+.+++.+|..
T Consensus 337 ~~i~ip~s-v~-~I~~--------------------~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 337 ERIAIPSS-VT-KIPE--------------------SAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp CEEEECTT-CC-BCCG--------------------GGGTTCTTCCEEEESSCHH
T ss_pred CEEEECcc-cC-EEhH--------------------hHhhCCCCCCEEEECCcee
Confidence 66655432 32 2222 1244566777777776643
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00087 Score=56.20 Aligned_cols=55 Identities=29% Similarity=0.395 Sum_probs=33.4
Q ss_pred EEEecCCCCC-ccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcC
Q 009965 74 KINISGSSLK-GFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQL 130 (521)
Q Consensus 74 ~L~L~~n~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 130 (521)
.++.++++|+ ..+|..+ -.+|++|+|++|+|+...+..|..+++|+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 5677777776 2355432 23566777777777655555566666666666666654
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.002 Score=64.48 Aligned_cols=110 Identities=15% Similarity=0.140 Sum_probs=70.1
Q ss_pred CEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecc
Q 009965 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
.+..+.+..+ +...-...+.++..|+.+.+..+ ++.+-...|.++.+|+.+.+..+ +...-...|.++++|+.+++.
T Consensus 218 ~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~ 294 (379)
T 4h09_A 218 NLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMD 294 (379)
T ss_dssp SCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEEC
T ss_pred ccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccccccccc
Confidence 4555555433 33333455677777888877665 55455566777777888777544 443344567777788888887
Q ss_pred cccCcccCchhhhCCCCCCEEeCCCCCCCccCCCC
Q 009965 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG 185 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~ 185 (521)
++.++..-+.+|.++.+|+.+.|..+ ++ .|+..
T Consensus 295 ~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~ 327 (379)
T 4h09_A 295 NSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQVY 327 (379)
T ss_dssp CTTCCEECTTTTTTCTTCCEEECCTT-CC-EECTT
T ss_pred ccccceehhhhhcCCCCCCEEEcCcc-cc-EEHHH
Confidence 77777555567777788888877644 44 45443
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=96.96 E-value=0.00022 Score=64.20 Aligned_cols=111 Identities=12% Similarity=0.116 Sum_probs=74.5
Q ss_pred CCCEEEEEecCC-CCCc----cCCccccCCCCCCEEECcCCccccc----CCccccCCCCCcEEEccCCcCCCC----CC
Q 009965 69 RDRVLKINISGS-SLKG----FLAPELGLLTYLQELILHGNNLIGI----IPKELGLLKRLKILDLGTNQLTGP----IP 135 (521)
Q Consensus 69 ~~~l~~L~L~~n-~l~~----~~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p 135 (521)
...++.|+|++| .|.. .+...+..-+.|+.|+|++|+|... +-..+..=+.|++|+|+.|+|... +-
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala 119 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 119 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHH
Confidence 457889999885 7753 2445566778899999999998732 223344557899999999988632 22
Q ss_pred cccCCCccCceeecccc---cCcc----cCchhhhCCCCCCEEeCCCCCCC
Q 009965 136 PEIGNLTGLVKINLQSN---GLTG----RLPAELGNLISLEELHLDRNRLQ 179 (521)
Q Consensus 136 ~~~~~l~~L~~L~Ls~N---~l~g----~~p~~~~~l~~L~~L~Ls~N~l~ 179 (521)
+.+..-+.|+.|+|++| .+.. .+-..+..-++|+.|+++.|...
T Consensus 120 ~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 120 RSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 33445567999999865 3332 13344556678899998877543
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.004 Score=60.11 Aligned_cols=30 Identities=3% Similarity=-0.240 Sum_probs=25.4
Q ss_pred CCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 484 PPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 484 ~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
+.++|+|+.+.||+ .+++.+.|.||..+..
T Consensus 173 ~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 173 LAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp CEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred ceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 45899999999999 6667789999987764
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0027 Score=64.85 Aligned_cols=72 Identities=11% Similarity=0.107 Sum_probs=47.0
Q ss_pred chhCcCCCeeEEEEEeCC--------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCc-cceeeEEecCCCCc
Q 009965 364 NIIGSSPDSLVYKGTMKG--------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT-GKLLGYCRESSPFT 434 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~--------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~ 434 (521)
+.|+.|....+|++...+ +..+.+|+.... . ....+..|..++..+...++ .++++.+. +
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~----~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--- 147 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--E----TESHLVAESVIFTLLSERHLGPKLYGIFS--G--- 147 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--C----CHHHHHHHHHHHHHHHHTTSSSCEEEEET--T---
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--C----cHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C---
Confidence 457788889999998763 467888775211 1 11345678888888843344 56666542 2
Q ss_pred eEEEEecCCCCCh
Q 009965 435 RMLVFDYASNGTL 447 (521)
Q Consensus 435 ~~lv~ey~~~gsL 447 (521)
.+|+||+++.++
T Consensus 148 -g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 -GRLEEYIPSRPL 159 (429)
T ss_dssp -EEEECCCCEEEC
T ss_pred -CEEEEEeCCccc
Confidence 389999986443
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0048 Score=61.64 Aligned_cols=97 Identities=12% Similarity=0.087 Sum_probs=75.7
Q ss_pred CCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecccccCcccCchhhhCC
Q 009965 86 LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNL 165 (521)
Q Consensus 86 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 165 (521)
....+.....|+.+.+..+ +...-...|.++.+|+.+.+..+ ++..-...|.++.+|+.+.+..+ ++..-...|.++
T Consensus 209 ~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c 285 (379)
T 4h09_A 209 TAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGC 285 (379)
T ss_dssp CTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTC
T ss_pred eecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccc
Confidence 3456778889999999765 45466678899999999999876 55455677889999999999755 554555678999
Q ss_pred CCCCEEeCCCCCCCccCCCCC
Q 009965 166 ISLEELHLDRNRLQGAVPAGS 186 (521)
Q Consensus 166 ~~L~~L~Ls~N~l~g~~p~~~ 186 (521)
++|+.+.+.++.++ .++...
T Consensus 286 ~~L~~i~l~~~~i~-~I~~~a 305 (379)
T 4h09_A 286 SNLTKVVMDNSAIE-TLEPRV 305 (379)
T ss_dssp TTCCEEEECCTTCC-EECTTT
T ss_pred cccccccccccccc-eehhhh
Confidence 99999999988887 566543
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0074 Score=60.35 Aligned_cols=140 Identities=11% Similarity=0.055 Sum_probs=80.1
Q ss_pred chhCcCCCeeEEEEEeCC--------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCc-cceeeEEecCCCCc
Q 009965 364 NIIGSSPDSLVYKGTMKG--------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT-GKLLGYCRESSPFT 434 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~--------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~ 434 (521)
+.+..|-...+|+....+ ++.+.+|+..... .....+.+|.++++.+.-.++ .++++++. +
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~-----~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~--- 125 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL-----QGVDSLVLESVMFAILAERSLGPQLYGVFP--E--- 125 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC--------CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--T---
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc-----chHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C---
Confidence 356667788899998753 4678887742110 112345689988887743233 45666553 2
Q ss_pred eEEEEecCCCCChhhh-----------------hccCC---CCCCC--HHHHHHHHHHHH-------------------H
Q 009965 435 RMLVFDYASNGTLYEH-----------------LHYGE---RCQVS--WTRRMKIVIGIA-------------------R 473 (521)
Q Consensus 435 ~~lv~ey~~~gsL~~~-----------------l~~~~---~~~l~--~~~~~~i~~~ia-------------------~ 473 (521)
.+||||+++.++..- +|.-. ..... |.+..++..++. +
T Consensus 126 -g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~ 204 (379)
T 3feg_A 126 -GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKD 204 (379)
T ss_dssp -EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHH
T ss_pred -ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHH
Confidence 389999997554321 12111 11222 444444443332 1
Q ss_pred HHHHHh----c-CCCCCeEecCCCCCCeeecCC----CCeeeCCCchhhh
Q 009965 474 GLKYLH----T-ELGPPFTISELNSSAVYLTED----FSPKVSPLCLSFL 514 (521)
Q Consensus 474 gL~yLH----~-~~~~~ivH~Dlk~~NiLld~~----~~~kl~DfGla~~ 514 (521)
.+.+|. . .....++|+|+.+.||+++++ +.+.|.||..|..
T Consensus 205 ~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 205 EMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 233332 2 123478999999999999876 7899999998764
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0069 Score=60.90 Aligned_cols=104 Identities=13% Similarity=0.163 Sum_probs=80.0
Q ss_pred CEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecc
Q 009965 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
.++.+.+.++.. ..-...|.+++.|+.+.+. +.++.+-...|.++++|+.++|..+ ++..-...|.++++|+.+.|.
T Consensus 266 ~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip 342 (394)
T 4gt6_A 266 YLASVKMPDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIP 342 (394)
T ss_dssp SCCEEECCTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEC
T ss_pred cccEEecccccc-eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEEC
Confidence 455566654432 2334568889999999996 5666666778999999999999865 664556789999999999997
Q ss_pred cccCcccCchhhhCCCCCCEEeCCCCCC
Q 009965 151 SNGLTGRLPAELGNLISLEELHLDRNRL 178 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 178 (521)
.+ ++..-..+|.++++|+.+++.+|..
T Consensus 343 ~s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 343 SS-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp TT-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred cc-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 65 6645567899999999999988754
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.013 Score=60.25 Aligned_cols=73 Identities=12% Similarity=0.102 Sum_probs=45.2
Q ss_pred chhCcCCCeeEEEEEeCC-CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCc-cceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT-GKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~~~lv~ey 441 (521)
+.|+.|-...+|+....+ +..+++|+....... .. +-.+|..++..+...++ .++++++ .+ .+||||
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~---~i--dR~~E~~vl~~L~~~gl~P~ll~~~--~~----G~v~e~ 182 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE---II--NREREKKISCILYNKNIAKKIYVFF--TN----GRIEEF 182 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCS---CS--CHHHHHHHHHHHTTSSSBCCEEEEE--TT----EEEEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhh---hc--CHHHHHHHHHHHHhcCCCCCEEEEe--CC----eEEEEe
Confidence 467788889999998875 467778765321111 00 12578888888865555 4666665 22 359999
Q ss_pred CCCCCh
Q 009965 442 ASNGTL 447 (521)
Q Consensus 442 ~~~gsL 447 (521)
+++.++
T Consensus 183 I~G~~l 188 (458)
T 2qg7_A 183 MDGYAL 188 (458)
T ss_dssp CCSEEC
T ss_pred eCCccC
Confidence 987444
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0063 Score=60.62 Aligned_cols=73 Identities=11% Similarity=0.045 Sum_probs=41.1
Q ss_pred chhCcCCCeeEEEEEeCC---------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCc-cceeeEEecCCCC
Q 009965 364 NIIGSSPDSLVYKGTMKG---------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT-GKLLGYCRESSPF 433 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~---------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~ 433 (521)
..++.|....+|+....+ +..+++|+....... . .+...|.+++..+...++ .++++.. .
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~----~-~~~~~E~~~l~~L~~~g~~P~~~~~~--~--- 108 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE----L-YNTISEFEVYKTMSKYKIAPQLLNTF--N--- 108 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG----T-SCHHHHHHHHHHHHHTTSSCCEEEEE--T---
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc----e-ecHHHHHHHHHHHHhcCCCCceEEec--C---
Confidence 456778888999998764 257777765221111 0 123567777777743343 3566543 2
Q ss_pred ceEEEEecCCCCCh
Q 009965 434 TRMLVFDYASNGTL 447 (521)
Q Consensus 434 ~~~lv~ey~~~gsL 447 (521)
-++||||+++.++
T Consensus 109 -~~~v~e~i~G~~l 121 (369)
T 3c5i_A 109 -GGRIEEWLYGDPL 121 (369)
T ss_dssp -TEEEEECCCSEEC
T ss_pred -CcEEEEEecCCcC
Confidence 2689999987543
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=96.40 E-value=0.014 Score=58.67 Aligned_cols=141 Identities=16% Similarity=0.090 Sum_probs=79.1
Q ss_pred CEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecc
Q 009965 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
.++.+.+..+ ++..-...+..+..|+.+.+..+... .....|..+..|+.+.+..+.+. ...|..+.+|+.+.+.
T Consensus 231 ~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~ 305 (394)
T 4fs7_A 231 GVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLL 305 (394)
T ss_dssp CCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEEC
T ss_pred CCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccc
Confidence 4566666533 33333445677778888887766543 44556666777777666555432 2345566666666665
Q ss_pred cccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcC-----cccCCCCCCEEeccCC
Q 009965 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT-----GLCHLSQLKVADFSYN 221 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~-----~~~~l~~L~~L~ls~N 221 (521)
.+ ++..-..+|.++++|+.++|..+ ++ .|+...+.+ ..+|..+.+..+ ++ .|..+.+|+.+++..+
T Consensus 306 ~~-i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~-c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 306 DS-VKFIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRG-CTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp TT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTT-CTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred cc-cceechhhhcCCCCCCEEEeCCc-cc-EEhHHhccC-CCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 44 44334455666677777766533 44 444433321 123444444333 22 3556788999888654
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=96.37 E-value=0.023 Score=55.88 Aligned_cols=32 Identities=13% Similarity=0.050 Sum_probs=27.8
Q ss_pred CCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 483 GPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 483 ~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
.+.++|+|+.+.||++++++.+.|.||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 34799999999999999888899999987654
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0042 Score=62.54 Aligned_cols=99 Identities=16% Similarity=0.074 Sum_probs=75.4
Q ss_pred EEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeeccc
Q 009965 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151 (521)
Q Consensus 72 l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 151 (521)
+..+.+..+.+ ....+..+.+|+.+.+..+ ++.+-..+|.++++|+.++|.++ ++..-...|.++++|+.+++..
T Consensus 278 l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~ 352 (394)
T 4fs7_A 278 LKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPL 352 (394)
T ss_dssp CCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCT
T ss_pred cceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECc
Confidence 44444444332 2346788999999999765 66566778999999999999754 6645567899999999999987
Q ss_pred ccCcccCchhhhCCCCCCEEeCCCC
Q 009965 152 NGLTGRLPAELGNLISLEELHLDRN 176 (521)
Q Consensus 152 N~l~g~~p~~~~~l~~L~~L~Ls~N 176 (521)
| ++..-..+|.++++|+.+++..+
T Consensus 353 ~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 353 S-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp T-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred c-ccEehHHHhhCCCCCCEEEECCC
Confidence 7 76556678999999999998754
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=96.32 E-value=0.002 Score=57.91 Aligned_cols=89 Identities=19% Similarity=0.101 Sum_probs=64.1
Q ss_pred cccCCCCCCEEECcCC-ccccc----CCccccCCCCCcEEEccCCcCCC----CCCcccCCCccCceeecccccCccc--
Q 009965 89 ELGLLTYLQELILHGN-NLIGI----IPKELGLLKRLKILDLGTNQLTG----PIPPEIGNLTGLVKINLQSNGLTGR-- 157 (521)
Q Consensus 89 ~l~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~-- 157 (521)
.+.+-+.|++|+|++| +|... +-..+..-+.|+.|+|++|+|.. .+.+.+..-+.|++|+|++|.|+..
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 4556788999999986 77521 33456666889999999999862 2333444557899999999999843
Q ss_pred --CchhhhCCCCCCEEeCCCCC
Q 009965 158 --LPAELGNLISLEELHLDRNR 177 (521)
Q Consensus 158 --~p~~~~~l~~L~~L~Ls~N~ 177 (521)
+-..+..-+.|++|+|++|.
T Consensus 116 ~ala~aL~~N~tL~~L~L~n~~ 137 (197)
T 1pgv_A 116 ARLLRSTLVTQSIVEFKADNQR 137 (197)
T ss_dssp HHHHHHTTTTCCCSEEECCCCS
T ss_pred HHHHHHHhhCCceeEEECCCCc
Confidence 23345556789999998753
|
| >3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=93.91 E-value=0.44 Score=48.14 Aligned_cols=139 Identities=11% Similarity=0.093 Sum_probs=80.0
Q ss_pred chhCcCCCeeEEEEEeCC--------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCc-cceeeEEecCCCCc
Q 009965 364 NIIGSSPDSLVYKGTMKG--------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT-GKLLGYCRESSPFT 434 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~--------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~ 434 (521)
+.+..|-...+|+....+ +..+++|+........ -+..+|..++..+.-.++ .++++.+ .
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~-----idR~~E~~~l~~L~~~gi~P~l~~~~--~---- 144 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKF-----YDSKVELDVFRYLSNINIAPNIIADF--P---- 144 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CC-----CCHHHHHHHHHHHHHTTSSCCEEEEE--T----
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchh-----cCHHHHHHHHHHHHhcCCCCCEEEEc--C----
Confidence 356667788999998863 4678887753221110 012467777777743233 4555433 2
Q ss_pred eEEEEecCCCCChhh--h---------------hcc----C-------CCCCCCHHHHHHHHHH----------------
Q 009965 435 RMLVFDYASNGTLYE--H---------------LHY----G-------ERCQVSWTRRMKIVIG---------------- 470 (521)
Q Consensus 435 ~~lv~ey~~~gsL~~--~---------------l~~----~-------~~~~l~~~~~~~i~~~---------------- 470 (521)
-++|+||+++.++.. . +|. . ...+.-|.+..++..+
T Consensus 145 ~~~I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~ 224 (424)
T 3mes_A 145 EGRIEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKEL 224 (424)
T ss_dssp TEEEEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHH
T ss_pred CCEEEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhcccc
Confidence 268999999865421 0 110 0 1112224443333222
Q ss_pred ---HHHHHHHHhc---------------------CCCCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 471 ---IARGLKYLHT---------------------ELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 471 ---ia~gL~yLH~---------------------~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
+.+.+.+|.. .....++|+|+.+.||+ ++++.+.|.||..|..
T Consensus 225 ~~~l~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 225 YSKILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 1223334331 11236899999999999 8888999999988764
|
| >3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A* | Back alignment and structure |
|---|
Probab=91.93 E-value=0.46 Score=47.63 Aligned_cols=29 Identities=14% Similarity=0.135 Sum_probs=24.5
Q ss_pred eEecCCCCCCeee------cCCCCeeeCCCchhhh
Q 009965 486 FTISELNSSAVYL------TEDFSPKVSPLCLSFL 514 (521)
Q Consensus 486 ivH~Dlk~~NiLl------d~~~~~kl~DfGla~~ 514 (521)
++|+|+.+.|||+ +++..+++.||-.|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5699999999999 4567799999988764
|
| >4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=86.74 E-value=1.9 Score=38.79 Aligned_cols=89 Identities=10% Similarity=0.027 Sum_probs=63.9
Q ss_pred CCCCccceeeEEecCCCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCC
Q 009965 416 NHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSA 495 (521)
Q Consensus 416 ~H~niv~l~g~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~N 495 (521)
.||+.++. .+-.+.+ ...+.|+.-++ ...|-. -..++...+++++..|+.-..+++.. +|--+.|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD--~v~~~y~~~~~--~~~f~~---ik~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRD--SFQIHYDINDN--HTPFDN---IKSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSS--EEEEEECCCTT--SEEGGG---GGGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGG
T ss_pred cCCcccce-EEEEccc--EEEEEEEcCcc--cCCHHH---HHhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecce
Confidence 68888876 4444444 45555554443 333221 12368899999999999988777654 778899999
Q ss_pred eeecCCCCeeeCCCchhhhccc
Q 009965 496 VYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 496 iLld~~~~~kl~DfGla~~~~~ 517 (521)
+++|.++.|++.-.|+-..+.+
T Consensus 110 L~f~~~~~p~i~~RGik~~l~P 131 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVVDP 131 (215)
T ss_dssp EEECTTSCEEESCCEETTTBSC
T ss_pred EEEcCCCCEEEEEccCccCCCC
Confidence 9999999999999998666554
|
| >4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid} | Back alignment and structure |
|---|
Probab=84.24 E-value=3.7 Score=37.03 Aligned_cols=88 Identities=9% Similarity=0.044 Sum_probs=61.9
Q ss_pred CCCCccceeeEEecCCCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHH-HHhcCCCCCeEecCCCCC
Q 009965 416 NHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK-YLHTELGPPFTISELNSS 494 (521)
Q Consensus 416 ~H~niv~l~g~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~-yLH~~~~~~ivH~Dlk~~ 494 (521)
.||.+ -..+-.+.+ ...+.|+--+++.=...++ .++...|++++..++.-.. +++.. +|--+.|+
T Consensus 48 ~~~~f--~~~I~~~eD--~~~i~y~~~~~~~~f~~i~-----~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSED--EVKVVIKPPSSFLTFAAIR-----KTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSS--EEEEEEECCTTCEEHHHHH-----TSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGG
T ss_pred cCCCC--CeEEEEeCC--EEEEEEEcCcccCcHHHHH-----hcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCc
Confidence 67777 333334444 5555565554432222332 3688899999999988777 66654 77788899
Q ss_pred CeeecCCCCeeeCCCchhhhccc
Q 009965 495 AVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 495 NiLld~~~~~kl~DfGla~~~~~ 517 (521)
||++|.++.|++.-.|+-..+.|
T Consensus 114 NL~f~~~~~p~i~hRGi~~~lpP 136 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKESLPP 136 (219)
T ss_dssp GEEECTTCCEEESCCEETTTBSS
T ss_pred eEEEeCCCcEEEEEcCCcccCCC
Confidence 99999999999999998666544
|
| >3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A | Back alignment and structure |
|---|
Probab=81.94 E-value=0.18 Score=51.69 Aligned_cols=61 Identities=7% Similarity=-0.110 Sum_probs=17.1
Q ss_pred chhCcCCCeeEEEEEeCC-CCEEEE------EEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEec
Q 009965 364 NIIGSSPDSLVYKGTMKG-GPEIAV------ISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRE 429 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~-~~~vav------k~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~ 429 (521)
+.+| ||.||+|.+.. ..+||| |..... .........|.+|..++...+|||+++..++...
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~--~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQD--GVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC-------------------------------------CBCCCEEEE
T ss_pred ccCC---chhhhcccccccCCchhhhhccCccccccc--cccccccccccccccccccccccccCCCcceEEe
Confidence 4555 99999999974 467888 554221 1222334568889999999999999999888753
|
| >2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=81.51 E-value=0.12 Score=33.67 Aligned_cols=28 Identities=7% Similarity=-0.001 Sum_probs=14.0
Q ss_pred eeeeeeechhhHHHHHhhheeeEeeecC
Q 009965 292 LTLEIVTGTMVGVLFLVAGFTGLQRCKS 319 (521)
Q Consensus 292 i~~~iv~g~~~~~~~~~~~~~~~~~~~~ 319 (521)
++++++.|+++.++++.+.++++||++.
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 4445555555544444444555555443
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 521 | ||||
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 3e-20 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 1e-19 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 2e-19 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 3e-19 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 4e-17 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 4e-17 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 4e-17 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 5e-17 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 5e-17 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 7e-17 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 7e-17 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 1e-16 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 2e-16 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 2e-15 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 2e-15 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 2e-15 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 4e-15 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 1e-14 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 2e-14 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 2e-14 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 2e-14 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 5e-14 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 1e-13 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 1e-13 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 2e-13 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 4e-13 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 7e-13 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 6e-05 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 3e-04 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 7e-04 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 4e-13 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 7e-13 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 7e-13 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 2e-12 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 2e-12 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 2e-04 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 3e-04 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 3e-12 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 3e-12 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 3e-12 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 7e-12 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 1e-11 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 8e-11 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 1e-10 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 6e-08 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 2e-07 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 1e-11 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 2e-11 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 2e-11 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 8e-11 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 1e-10 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 2e-10 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 3e-10 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 4e-10 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 4e-10 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 1e-09 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 2e-09 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 4e-09 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 1e-08 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 1e-08 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 1e-08 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 8e-08 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 1e-07 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 1e-07 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 2e-07 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 4e-07 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 4e-07 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 2e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 8e-07 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 3e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 7e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 9e-04 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 9e-07 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 1e-06 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 2e-06 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 2e-06 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 0.003 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 2e-06 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 2e-06 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 3e-06 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 7e-06 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 1e-05 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 6e-04 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 3e-05 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 3e-05 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 3e-05 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 4e-05 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 1e-04 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 0.001 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 1e-04 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 2e-04 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 7e-04 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 0.002 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 0.002 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 0.002 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 4e-04 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 7e-04 |
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 88.7 bits (219), Expect = 3e-20
Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 14/188 (7%)
Query: 337 IYID----SEILKDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMK--GGPEIAVISL 390
I+ID + + V F++ E++++C +IG+ V G +K G EI V
Sbjct: 2 IFIDPFTFEDPNEAVREFAK-EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIK 60
Query: 391 CIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEH 450
+K + F E + + + +H N L G +S+P M++ ++ NG+L +
Sbjct: 61 TLKSGYTEKQRR-DFLSEASIMGQFDHPNVIHLEGVVTKSTPV--MIITEFMENGSL-DS 116
Query: 451 LHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLC 510
Q + + + ++ GIA G+KYL + +L + + + + KVS
Sbjct: 117 FLRQNDGQFTVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFG 173
Query: 511 LSFLLVSS 518
LS L
Sbjct: 174 LSRFLEDD 181
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 87.0 bits (215), Expect = 1e-19
Identities = 29/169 (17%), Positives = 68/169 (40%), Gaps = 13/169 (7%)
Query: 352 RQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREV 409
E EV E +G+ V+ G G ++AV SL F E
Sbjct: 5 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-----FLAEA 59
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
+ ++ H+ +L + + ++ +Y NG+L + L +++ + + +
Sbjct: 60 NLMKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 116
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
IA G+ ++ + +L ++ + +++ S K++ L+ L+ +
Sbjct: 117 QIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 162
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 85.8 bits (212), Expect = 2e-19
Identities = 37/164 (22%), Positives = 62/164 (37%), Gaps = 13/164 (7%)
Query: 354 ELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVAD 411
+ E+ + IGS VYKG G + ++ T F+ EV
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKML----NVTAPTPQQLQAFKNEVGV 57
Query: 412 LARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGI 471
L + H N +GY +V + +LY HLH + + + I
Sbjct: 58 LRKTRHVNILLFMGYSTAPQLA---IVTQWCEGSSLYHHLH-IIETKFEMIKLIDIARQT 113
Query: 472 ARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
A+G+ YLH +L S+ ++L ED + K+ L+ +
Sbjct: 114 AQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK 154
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 85.1 bits (210), Expect = 3e-19
Identities = 31/158 (19%), Positives = 63/158 (39%), Gaps = 11/158 (6%)
Query: 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
F +G+ +V G +G ++A+ K E F E + ++HE
Sbjct: 7 TFLKELGTGQFGVVKYGKWRGQYDVAI-----KMIKEGSMSEDEFIEEAKVMMNLSHEKL 61
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
+L G C + P ++ +Y +NG L +L R + + +++ + ++YL +
Sbjct: 62 VQLYGVCTKQRPI--FIITEYMANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLES 118
Query: 481 ELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
F +L + + + KVS LS ++
Sbjct: 119 ---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 153
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.8 bits (196), Expect = 4e-17
Identities = 32/170 (18%), Positives = 72/170 (42%), Gaps = 12/170 (7%)
Query: 353 QELEVACEDFSNI---IGSSPDSLVYKGTMKGGPEIAVISL-CIKEEHWTGYLELYFQRE 408
++L + ++ +G V +G + + +++ +K+ E RE
Sbjct: 1 KKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTE-EMMRE 59
Query: 409 VADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIV 468
+ ++++ +L+G C+ + LV + A G L++ L G+R ++ + +++
Sbjct: 60 AQIMHQLDNPYIVRLIGVCQAEALM---LVMEMAGGGPLHKFLV-GKREEIPVSNVAELL 115
Query: 469 IGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
++ G+KYL F +L + V L K+S LS L +
Sbjct: 116 HQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD 162
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.4 bits (195), Expect = 4e-17
Identities = 32/146 (21%), Positives = 61/146 (41%), Gaps = 9/146 (6%)
Query: 374 VYKGTMKGGPEIAVISL-CIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432
V KG + + +++ +K E L+ E + ++++ +++G C S
Sbjct: 23 VKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAES- 81
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELN 492
MLV + A G L ++L + V +++V ++ G+KYL F +L
Sbjct: 82 --WMLVMEMAELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLA 134
Query: 493 SSAVYLTEDFSPKVSPLCLSFLLVSS 518
+ V L K+S LS L +
Sbjct: 135 ARNVLLVTQHYAKISDFGLSKALRAD 160
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.9 bits (194), Expect = 4e-17
Identities = 32/162 (19%), Positives = 58/162 (35%), Gaps = 7/162 (4%)
Query: 360 EDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH 417
ED+ IG+ K K +I V + T + EV L + H
Sbjct: 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWK-ELDYGSMTEAEKQMLVSEVNLLRELKH 62
Query: 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGL 475
N + + + T +V +Y G L + G ER + ++++ + L
Sbjct: 63 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 122
Query: 476 KYLHTELGPPFTIS--ELNSSAVYLTEDFSPKVSPLCLSFLL 515
K H T+ +L + V+L + K+ L+ +L
Sbjct: 123 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 164
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.9 bits (194), Expect = 5e-17
Identities = 34/152 (22%), Positives = 62/152 (40%), Gaps = 13/152 (8%)
Query: 356 EVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLA 413
+ ++ IG V G +G ++AV CIK + F E + +
Sbjct: 3 ALNMKELKLLQTIGKGEFGDVMLGDYRGN-KVAVK--CIKNDA----TAQAFLAEASVMT 55
Query: 414 RINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIAR 473
++ H N +LLG E +V +Y + G+L ++L R + +K + +
Sbjct: 56 QLRHSNLVQLLGVIVEEKGG-LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCE 114
Query: 474 GLKYLHTELGPPFTISELNSSAVYLTEDFSPK 505
++YL G F +L + V ++ED K
Sbjct: 115 AMEYLE---GNNFVHRDLAARNVLVSEDNVAK 143
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.5 bits (195), Expect = 5e-17
Identities = 34/152 (22%), Positives = 68/152 (44%), Gaps = 16/152 (10%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRE--SS 431
V++G +G E+AV +EE + + E+ + HEN + + +
Sbjct: 19 VWRGKWRGE-EVAVKIFSSREER-----SWFREAEIYQTVMLRHENILGFIAADNKDNGT 72
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL-----GPPF 486
LV DY +G+L+++L+ R V+ +K+ + A GL +LH E+ P
Sbjct: 73 WTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI 129
Query: 487 TISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
+L S + + ++ + ++ L L+ S+
Sbjct: 130 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSA 161
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 79.0 bits (194), Expect = 7e-17
Identities = 36/162 (22%), Positives = 66/162 (40%), Gaps = 13/162 (8%)
Query: 349 RFSRQELEVACEDFS--NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYF 405
+ + E+ D + + +G VY+G K +AV +L F
Sbjct: 6 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----F 60
Query: 406 QREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRM 465
+E A + I H N +LLG C PF ++ ++ + G L ++L R +VS +
Sbjct: 61 LKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVLL 118
Query: 466 KIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVS 507
+ I+ ++YL F +L + + E+ KV+
Sbjct: 119 YMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVA 157
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.2 bits (192), Expect = 7e-17
Identities = 32/158 (20%), Positives = 62/158 (39%), Gaps = 11/158 (6%)
Query: 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
F IGS LV+ G ++A+ K E F E + +++H
Sbjct: 8 TFVQEIGSGQFGLVHLGYWLNKDKVAI-----KTIREGAMSEEDFIEEAEVMMKLSHPKL 62
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
+L G C E +P LVF++ +G L ++ +R + + + + + G+ YL
Sbjct: 63 VQLYGVCLEQAPI--CLVFEFMEHGCLSDY-LRTQRGLFAAETLLGMCLDVCEGMAYLEE 119
Query: 481 ELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
+L + + E+ KVS ++ ++
Sbjct: 120 ---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 154
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.6 bits (193), Expect = 1e-16
Identities = 29/166 (17%), Positives = 59/166 (35%), Gaps = 10/166 (6%)
Query: 355 LEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADL 412
+E+ +DF + +G+ +V+K + K + L I E RE+ L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKL-IHLEIKPAIRN-QIIRELQVL 58
Query: 413 ARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIA 472
N G + ++ G+L + L + ++ K+ I +
Sbjct: 59 HECNSPYIVGFYGAFYSDGEI--SICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAVI 114
Query: 473 RGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
+GL YL + ++ S + + K+ +S L+ S
Sbjct: 115 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 158
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.8 bits (191), Expect = 2e-16
Identities = 31/171 (18%), Positives = 65/171 (38%), Gaps = 13/171 (7%)
Query: 350 FSRQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQR 407
++ E+ E +G V+ GT G +A+ K F +
Sbjct: 7 LAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAI-----KTLKPGTMSPEAFLQ 61
Query: 408 EVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKI 467
E + ++ HE +L E + +V +Y S G+L + L + + + +
Sbjct: 62 EAQVMKKLRHEKLVQLYAVVSEEPIY---IVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 118
Query: 468 VIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
IA G+ Y+ + +L ++ + + E+ KV+ L+ L+ +
Sbjct: 119 AAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 166
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 75.2 bits (184), Expect = 2e-15
Identities = 41/184 (22%), Positives = 73/184 (39%), Gaps = 13/184 (7%)
Query: 339 IDSEILKDV--VRFSRQELEVACEDFSNIIGSSPDSLVYKGTMK--GGPEIAVISLCIKE 394
++ E+++ V V L V F+ +IG VY GT+ G +I +
Sbjct: 9 LNPELVQAVQHVVIGPSSLIV---HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR 65
Query: 395 EHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYG 454
G + F E + +H N LLG C S + ++V Y +G L +
Sbjct: 66 ITDIGEVS-QFLTEGIIMKDFSHPNVLSLLGICLR-SEGSPLVVLPYMKHGDLR-NFIRN 122
Query: 455 ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514
E + + + +A+G+K+L + F +L + L E F+ KV+ L+
Sbjct: 123 ETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARD 179
Query: 515 LVSS 518
+
Sbjct: 180 MYDK 183
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 74.6 bits (183), Expect = 2e-15
Identities = 29/171 (16%), Positives = 57/171 (33%), Gaps = 12/171 (7%)
Query: 350 FSRQELEVACEDFSNI--IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQR 407
F + + E + FS++ IG VY E+ I + +
Sbjct: 8 FFKDDPE---KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIK 64
Query: 408 EVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKI 467
EV L ++ H NT + G LV +Y + + + +
Sbjct: 65 EVRFLQKLRHPNTIQYRGCYLREHTA--WLVMEYCLGSASDLLEVHKKP--LQEVEIAAV 120
Query: 468 VIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
G +GL YLH+ ++ + + L+E K+ + ++ +
Sbjct: 121 THGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 168
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 74.5 bits (182), Expect = 2e-15
Identities = 38/206 (18%), Positives = 68/206 (33%), Gaps = 38/206 (18%)
Query: 335 DHIYIDSEIL--KDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKG------GPEIA 386
+++YID L F R L F +G+ V + T G +A
Sbjct: 3 NYVYIDPTQLPYDHKWEFPRNRLS-----FGKTLGAGAFGKVVEATAYGLIKSDAAMTVA 57
Query: 387 VISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDYASNG 445
V +K E E+ L+ + NH N LLG C P +++ +Y G
Sbjct: 58 VK--MLKPSAHLTEREA-LMSELKVLSYLGNHMNIVNLLGACTIGGP--TLVITEYCCYG 112
Query: 446 TLYEHLH----------------YGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTIS 489
L L + + + +A+G+ +L ++
Sbjct: 113 DLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHR 169
Query: 490 ELNSSAVYLTEDFSPKVSPLCLSFLL 515
+L + + LT K+ L+ +
Sbjct: 170 DLAARNILLTHGRITKICDFGLARDI 195
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 74.1 bits (181), Expect = 4e-15
Identities = 34/163 (20%), Positives = 62/163 (38%), Gaps = 11/163 (6%)
Query: 360 EDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKE--EHWTGYLELYFQREVADLARI 415
+F ++GS VYKG E I + IKE E + E +A +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 416 NHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGL 475
++ + +LLG C S+ L+ G L ++ + + + + IA+G+
Sbjct: 69 DNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQIAKGM 124
Query: 476 KYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
YL +L + V + K++ L+ LL +
Sbjct: 125 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 164
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 72.6 bits (177), Expect = 1e-14
Identities = 41/193 (21%), Positives = 69/193 (35%), Gaps = 32/193 (16%)
Query: 353 QELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLC-IKE--EHWTGYLELYFQR 407
LE + IG V++ G ++ +K E + ++ FQR
Sbjct: 6 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQR 65
Query: 408 EVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH--------------- 452
E A +A ++ N KLLG C P L+F+Y + G L E L
Sbjct: 66 EAALMAEFDNPNIVKLLGVCAVGKP--MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDL 123
Query: 453 -------YGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPK 505
+S ++ I +A G+ YL F +L + + E+ K
Sbjct: 124 STRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVK 180
Query: 506 VSPLCLSFLLVSS 518
++ LS + S+
Sbjct: 181 IADFGLSRNIYSA 193
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.8 bits (175), Expect = 2e-14
Identities = 38/167 (22%), Positives = 71/167 (42%), Gaps = 8/167 (4%)
Query: 354 ELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIK--EEHWTGYLELYFQREVAD 411
E+ +C +IG+ VYKG +K + + IK + +T + F E
Sbjct: 3 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGI 62
Query: 412 LARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGI 471
+ + +H N +L G + P M++ +Y NG + + + S + + ++ GI
Sbjct: 63 MGQFSHHNIIRLEGVISKYKPM--MIITEYMENGA-LDKFLREKDGEFSVLQLVGMLRGI 119
Query: 472 ARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
A G+KYL + +L + + + + KVS LS +L
Sbjct: 120 AAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 163
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 72.0 bits (176), Expect = 2e-14
Identities = 33/155 (21%), Positives = 58/155 (37%), Gaps = 6/155 (3%)
Query: 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
DF +++G+ S V K ++ I CI ++ G + E+A L +I H N
Sbjct: 12 DFRDVLGTGAFSEVILAEDKRTQKLVAIK-CIAKKALEGKEGS-MENEIAVLHKIKHPNI 69
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
L L+ S G L++ + E+ + +++ + +KYLH
Sbjct: 70 VALDDIYESGGHL--YLIMQLVSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHD 125
Query: 481 ELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
+ N L ED +S LS +
Sbjct: 126 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME 160
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.1 bits (176), Expect = 2e-14
Identities = 44/217 (20%), Positives = 83/217 (38%), Gaps = 39/217 (17%)
Query: 330 SASEKDHIYIDSEILKDVVR--FSRQELEVACEDFSNIIGSSPDSLVYKGTMKG----GP 383
+S+ ++ Y+D + ++ F R+ LE F ++GS V T G G
Sbjct: 12 GSSDNEYFYVDFREYEYDLKWEFPRENLE-----FGKVLGSGAFGKVMNATAYGISKTGV 66
Query: 384 EIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDYA 442
I V +KE+ + E E+ + ++ +HEN LLG C S P L+F+Y
Sbjct: 67 SIQVAVKMLKEKADSSERE-ALMSELKMMTQLGSHENIVNLLGACTLSGPI--YLIFEYC 123
Query: 443 SNGTLYEHLH---------------------YGERCQVSWTRRMKIVIGIARGLKYLHTE 481
G L +L + +++ + +A+G+++L
Sbjct: 124 CYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF- 182
Query: 482 LGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
+L + V +T K+ L+ ++S
Sbjct: 183 --KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSD 217
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.0 bits (171), Expect = 5e-14
Identities = 35/164 (21%), Positives = 60/164 (36%), Gaps = 9/164 (5%)
Query: 360 EDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH 417
EDF +G VY K I + + K + +E +REV + + H
Sbjct: 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 65
Query: 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
N +L GY +++ L+ +YA GT+Y L + R + +A L Y
Sbjct: 66 PNILRLYGYFHDATRV--YLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 121
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSSIIC 521
H++ ++ + L K++ S SS
Sbjct: 122 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 162
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.2 bits (169), Expect = 1e-13
Identities = 36/161 (22%), Positives = 61/161 (37%), Gaps = 9/161 (5%)
Query: 362 FSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
F IG VYKG E+A +++ T F+ E L + H N
Sbjct: 13 FDIEIGRGSFKTVYKGLDTETTVEVAWC--ELQDRKLTKSERQRFKEEAEMLKGLQHPNI 70
Query: 421 GKLLGYCRESSPFTR--MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
+ + + +LV + ++GTL +L + I +GL++L
Sbjct: 71 VRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFL 128
Query: 479 HTELGPPFTISELNSSAVYLT-EDFSPKVSPLCLSFLLVSS 518
H PP +L +++T S K+ L L+ L +S
Sbjct: 129 H-TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS 168
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.1 bits (168), Expect = 1e-13
Identities = 34/169 (20%), Positives = 62/169 (36%), Gaps = 20/169 (11%)
Query: 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHEN 419
F ++IG V K +K ++ +E+ + F E+ L ++ +H N
Sbjct: 13 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN 72
Query: 420 TGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH--------------YGERCQVSWTRRM 465
LLG C L +YA +G L + L +S + +
Sbjct: 73 IINLLGACEHRGY--LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 130
Query: 466 KIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514
+ARG+ YL F +L + + + E++ K++ LS
Sbjct: 131 HFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRG 176
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 68.6 bits (167), Expect = 2e-13
Identities = 27/149 (18%), Positives = 50/149 (33%), Gaps = 12/149 (8%)
Query: 374 VYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRE 429
V +G +AV L ++ F REV + ++H N +L G
Sbjct: 24 VRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-DFIREVNAMHSLDHRNLIRLYGVVLT 82
Query: 430 SSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTIS 489
+V + A G+L + + + + +A G+ YL + F
Sbjct: 83 PPMK---MVTELAPLGSLLDR-LRKHQGHFLLGTLSRYAVQVAEGMGYLES---KRFIHR 135
Query: 490 ELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
+L + + L K+ L L +
Sbjct: 136 DLAARNLLLATRDLVKIGDFGLMRALPQN 164
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 68.9 bits (167), Expect = 4e-13
Identities = 42/210 (20%), Positives = 72/210 (34%), Gaps = 51/210 (24%)
Query: 47 LSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNL 106
L+N +L A + I + +++++G+ LK L LT L +L L N +
Sbjct: 196 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQI 253
Query: 107 IGIIPKELGLLKRLKILDLGTNQLTGPIP--------------------PEIGNLTGLVK 146
+ P L L +L L LG NQ++ P I NL L
Sbjct: 254 SNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTY 311
Query: 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG 206
+ L N ++ P + +L L+ L N++ ++
Sbjct: 312 LTLYFNNISDISP--VSSLTKLQRLFFANNKVSD-----------------------VSS 346
Query: 207 LCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
L +L+ + +N P L L
Sbjct: 347 LANLTNINWLSAGHNQISDLTP--LANLTR 374
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 67.7 bits (164), Expect = 7e-13
Identities = 34/199 (17%), Positives = 67/199 (33%), Gaps = 49/199 (24%)
Query: 43 PHLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILH 102
P +L+N + L + I + + ++++ + + L LT L EL L
Sbjct: 214 PLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNL--APLSGLTKLTELKLG 271
Query: 103 GNNLIGIIP--------------------KELGLLKRLKILDLGTNQLTGPIPPEIGNLT 142
N + I P + LK L L L N ++ P + +LT
Sbjct: 272 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLT 329
Query: 143 GLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSA 202
L ++ +N ++ + L NL ++ L N++ P
Sbjct: 330 KLQRLFFANNKVSD--VSSLANLTNINWLSAGHNQISDLTP------------------- 368
Query: 203 NLTGLCHLSQLKVADFSYN 221
L +L+++ +
Sbjct: 369 ----LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 43.1 bits (100), Expect = 6e-05
Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 6/77 (7%)
Query: 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131
+K + +++ ++ L + L + I + L L ++ NQLT
Sbjct: 24 KMKTVLGKTNVTDTVSQTD--LDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLT 79
Query: 132 GPIPPEIGNLTGLVKIN 148
P + NLT LV I
Sbjct: 80 DITP--LKNLTKLVDIL 94
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 40.8 bits (94), Expect = 3e-04
Identities = 11/72 (15%), Positives = 26/72 (36%), Gaps = 4/72 (5%)
Query: 117 LKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRN 176
L LG +T + +L + + G+ + + L +L +++ N
Sbjct: 21 LAEKMKTVLGKTNVTDTVSQT--DLDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNN 76
Query: 177 RLQGAVPAGSNS 188
+L P + +
Sbjct: 77 QLTDITPLKNLT 88
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 39.6 bits (91), Expect = 7e-04
Identities = 20/108 (18%), Positives = 36/108 (33%), Gaps = 29/108 (26%)
Query: 125 LGTNQLTGPIP-PEI---GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
LG+ +T P +I L +K L +T + +L + L DR ++
Sbjct: 1 LGSATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQT--DLDQVTTLQADRLGIK- 57
Query: 181 AVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP 228
++ G+ +L+ L +FS N P
Sbjct: 58 ----------------------SIDGVEYLNNLTQINFSNNQLTDITP 83
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.7 bits (165), Expect = 4e-13
Identities = 32/163 (19%), Positives = 59/163 (36%), Gaps = 12/163 (7%)
Query: 360 EDFSNI---IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN 416
EDF I +G VYK K +A I + + + E+ LA +
Sbjct: 11 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAK-VIDTKSEEELED--YMVEIDILASCD 67
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
H N KLL + ++ ++ + G + + ER ++ ++ + L
Sbjct: 68 HPNIVKLLDAFYYENNL--WILIEFCAGGAVDAVMLELERP-LTESQIQVVCKQTLDALN 124
Query: 477 YLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSSI 519
YLH +L + + T D K++ +S +I
Sbjct: 125 YLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI 164
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.2 bits (163), Expect = 7e-13
Identities = 35/181 (19%), Positives = 69/181 (38%), Gaps = 24/181 (13%)
Query: 354 ELEVACEDFS--NIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYF 405
E EVA E + +G +VY+G KG +A+ + E F
Sbjct: 14 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAI--KTVNEAASMRERI-EF 70
Query: 406 QREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHY--------GERC 457
E + + N + +LLG + P +++ + + G L +L
Sbjct: 71 LNEASVMKEFNCHHVVRLLGVVSQGQP--TLVIMELMTRGDLKSYLRSLRPAMANNPVLA 128
Query: 458 QVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517
S ++ +++ IA G+ YL+ F +L + + EDF+ K+ ++ +
Sbjct: 129 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 185
Query: 518 S 518
+
Sbjct: 186 T 186
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 66.7 bits (162), Expect = 7e-13
Identities = 29/169 (17%), Positives = 60/169 (35%), Gaps = 12/169 (7%)
Query: 354 ELEVACEDFS--NIIGSSPDSLVYKGTMK--GGPEIAVISLCIKEEHWTGYLELYFQREV 409
+ E+ E IG V++G P +AV K E F +E
Sbjct: 1 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE-KFLQEA 59
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
+ + +H + KL+G E+ + ++ + + G L + + +
Sbjct: 60 LTMRQFDHPHIVKLIGVITENPVW---IIMELCTLGELRSF-LQVRKYSLDLASLILYAY 115
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
++ L YL + F ++ + V ++ + K+ LS + S
Sbjct: 116 QLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 161
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 65.9 bits (160), Expect = 2e-12
Identities = 23/152 (15%), Positives = 57/152 (37%), Gaps = 13/152 (8%)
Query: 332 SEKDHIYID--SEILKDVVRFSRQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAV 387
++ D Y D + + V + + + + +GS +V++ K + V
Sbjct: 2 NDYDKFYEDIWKKYVPQPVEVKQGSVY---DYYDILEELGSGAFGVVHRCVEKATGRVFV 58
Query: 388 ISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTL 447
Y + E++ + +++H L + +L+ ++ S G L
Sbjct: 59 AKFINTPYPLDKYT---VKNEISIMNQLHHPKLINLHDAFEDKYEM--VLILEFLSGGEL 113
Query: 448 YEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
++ + E ++S + + GLK++H
Sbjct: 114 FDRIA-AEDYKMSEAEVINYMRQACEGLKHMH 144
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 65.4 bits (158), Expect = 2e-12
Identities = 32/194 (16%), Positives = 54/194 (27%), Gaps = 17/194 (8%)
Query: 58 CHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLL 117
CH + CSD + ++ L L N + I + L
Sbjct: 10 CHLRVVQCSDLGLEKVPKDLP---------------PDTALLDLQNNKITEIKDGDFKNL 54
Query: 118 KRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNR 177
K L L L N+++ P L L ++ L N L L L + +
Sbjct: 55 KNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITK 114
Query: 178 LQGAVPAGSNSGYTANIHGMYASSAN--LTGLCHLSQLKVADFSYNFFVGSIPKCLEYLP 235
++ +V G N + S+ + +L + L
Sbjct: 115 VRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLT 174
Query: 236 STSFQGNCLQNKDP 249
GN + D
Sbjct: 175 ELHLDGNKITKVDA 188
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 40.8 bits (94), Expect = 2e-04
Identities = 33/201 (16%), Positives = 64/201 (31%), Gaps = 20/201 (9%)
Query: 32 LTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGFLAPELG 91
L E + + + + N + + + V+++ + G
Sbjct: 91 LKELPEKMPKTLQELRVHENEIT---KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQ 147
Query: 92 LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151
+ L + + N+ I GL L L L N++T + L L K+ L
Sbjct: 148 GMKKLSYIRIADTNITTIPQ---GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSF 204
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---- 207
N ++ L N L ELHL+ N+L ++ I +Y + N++ +
Sbjct: 205 NSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLAD---HKYIQVVYLHNNNISAIGSND 261
Query: 208 -------CHLSQLKVADFSYN 221
+ N
Sbjct: 262 FCPPGYNTKKASYSGVSLFSN 282
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 40.4 bits (93), Expect = 3e-04
Identities = 22/118 (18%), Positives = 35/118 (29%), Gaps = 29/118 (24%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI---------------- 134
GL L EL L GN + + L L L L L N ++
Sbjct: 168 GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLN 227
Query: 135 -------PPEIGNLTGLVKINLQSNGLTG------RLPAELGNLISLEELHLDRNRLQ 179
P + + + + L +N ++ P S + L N +Q
Sbjct: 228 NNKLVKVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 285
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.6 bits (157), Expect = 3e-12
Identities = 30/158 (18%), Positives = 57/158 (36%), Gaps = 11/158 (6%)
Query: 360 EDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH 417
ED+ +G V + E + + + E ++E+ +NH
Sbjct: 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPE-NIKKEICINKMLNH 62
Query: 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
EN K G+ RE + L +Y S G L++ + + + + G+ Y
Sbjct: 63 ENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVY 118
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
LH T ++ + L E + K+S L+ +
Sbjct: 119 LHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF 153
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 65.5 bits (159), Expect = 3e-12
Identities = 20/134 (14%), Positives = 55/134 (41%), Gaps = 11/134 (8%)
Query: 374 VYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432
V++ T + G A + E + ++E+ ++ + H L + +
Sbjct: 42 VHRVTERATGNNFAAKFVMTPHESD----KETVRKEIQTMSVLRHPTLVNLHDAFEDDNE 97
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELN 492
++++++ S G L+E + E ++S ++ + + +GL ++H + +L
Sbjct: 98 M--VMIYEFMSGGELFEKVA-DEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLK 151
Query: 493 SSAVYLTEDFSPKV 506
+ T S ++
Sbjct: 152 PENIMFTTKRSNEL 165
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.6 bits (159), Expect = 3e-12
Identities = 23/124 (18%), Positives = 46/124 (37%), Gaps = 12/124 (9%)
Query: 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
+ +IG+ +VY+ + E+ I ++++ + RE+ + +++H N
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDHCNI 75
Query: 421 GKLLGYCRESSPFTR----MLVFDYASNGTLYEHLHYGERCQ-VSWTRRMKIVIGIARGL 475
+L + S LV DY HY Q + + + R L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 476 KYLH 479
Y+H
Sbjct: 136 AYIH 139
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 63.6 bits (154), Expect = 7e-12
Identities = 20/117 (17%), Positives = 42/117 (35%), Gaps = 4/117 (3%)
Query: 365 IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLL 424
I+G S V+ + + + L F+RE + A +NH +
Sbjct: 14 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 73
Query: 425 GYCRESSPFTR--MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+P +V +Y TL + +H ++ R ++++ + L + H
Sbjct: 74 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSH 128
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 63.6 bits (153), Expect = 1e-11
Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 21 CNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCH--WTGIACSDARD--RVLKIN 76
CN + AL K+ + +P LS+W D C+ W G+ C RV ++
Sbjct: 3 CNP---QDKQALLQIKKDL-GNPT-TLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLD 56
Query: 77 ISGSSLKGF--LAPELGLLTYLQELILHGN-NLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+SG +L + L L YL L + G NL+G IP + L +L L + ++G
Sbjct: 57 LSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGA 116
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183
IP + + LV ++ N L+G LP + +L +L + D NR+ GA+P
Sbjct: 117 IPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIP 166
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 60.9 bits (146), Expect = 8e-11
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 101 LHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN-GLTGR-L 158
L N + G +P+ L LK L L++ N L G I P+ GNL +N L G L
Sbjct: 251 LRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEI-PQGGNLQRFDVSAYANNKCLCGSPL 309
Query: 159 PA 160
PA
Sbjct: 310 PA 311
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 60.5 bits (145), Expect = 1e-10
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 124 DLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183
DL N++ G +P + L L +N+ N L G +P + GNL + N+ P
Sbjct: 250 DLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSAYANNKCLCGSP 308
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 52.1 bits (123), Expect = 6e-08
Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 58 CHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLL 117
+ + +++ + + G L L L +L L + NNL G IP + G L
Sbjct: 232 SLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNL 290
Query: 118 KRLKILDLGTNQ-LTG-PIPP 136
+R + N+ L G P+P
Sbjct: 291 QRFDVSAYANNKCLCGSPLPA 311
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 50.9 bits (120), Expect = 2e-07
Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 27/91 (29%)
Query: 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL 207
+L++N + G LP L L L L++ N L G +P G N
Sbjct: 250 DLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGN-------------------- 289
Query: 208 CHLSQLKVADFSYNFFVGSIPKCLEYLPSTS 238
L + V+ ++ N + P LP+ +
Sbjct: 290 --LQRFDVSAYANNKCLCGSP-----LPACT 313
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.5 bits (154), Expect = 1e-11
Identities = 16/133 (12%), Positives = 47/133 (35%), Gaps = 10/133 (7%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
V++ + + K G ++ ++E++ L H N L
Sbjct: 21 VHRCVETSSKKTYMA----KFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEEL 76
Query: 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNS 493
+++F++ S ++E ++ +++ + V + L++LH+ ++
Sbjct: 77 --VMIFEFISGLDIFERIN-TSAFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRP 130
Query: 494 SAVYLTEDFSPKV 506
+ S +
Sbjct: 131 ENIIYQTRRSSTI 143
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.7 bits (152), Expect = 2e-11
Identities = 20/143 (13%), Positives = 50/143 (34%), Gaps = 13/143 (9%)
Query: 374 VYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432
VY G E+A+ + ++++ + E+ + + N L
Sbjct: 36 VYTAMDVATGQEVAIRQMNLQQQPK----KELIINEILVMRENKNPNIVNYLDSYLVGDE 91
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELN 492
+V +Y + G+L + + + + + + L++LH+ ++
Sbjct: 92 L--WVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIK 143
Query: 493 SSAVYLTEDFSPKVSPLCLSFLL 515
S + L D S K++ +
Sbjct: 144 SDNILLGMDGSVKLTDFGFCAQI 166
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 62.4 bits (151), Expect = 2e-11
Identities = 35/168 (20%), Positives = 62/168 (36%), Gaps = 16/168 (9%)
Query: 360 EDFS--NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELY-----FQREVAD 411
E++ I+G S+V + K E AV + + E+ +EV
Sbjct: 3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 62
Query: 412 LARIN-HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIG 470
L +++ H N +L LVFD G L+++L E+ +S KI+
Sbjct: 63 LRKVSGHPNIIQLKDTYET--NTFFFLVFDLMKKGELFDYLT--EKVTLSEKETRKIMRA 118
Query: 471 IARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
+ + LH +L + L +D + K++ S L
Sbjct: 119 LLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG 163
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.7 bits (146), Expect = 8e-11
Identities = 27/187 (14%), Positives = 53/187 (28%), Gaps = 27/187 (14%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISL----CIKEEHWTGYLELYF 405
F R L+ +G V + G + A +KE
Sbjct: 10 FPRDRLK-----LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHR-AL 63
Query: 406 QREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQV------ 459
E+ L I H L M++ ++ G L +L V
Sbjct: 64 MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAP 123
Query: 460 --------SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCL 511
+ + +A+G+++L + +L + + L+E K+ L
Sbjct: 124 EDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGL 180
Query: 512 SFLLVSS 518
+ +
Sbjct: 181 ARDIYKD 187
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 60.5 bits (146), Expect = 1e-10
Identities = 27/164 (16%), Positives = 47/164 (28%), Gaps = 12/164 (7%)
Query: 360 EDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-- 415
DFS IIG VY ++ + K+ E E L+ +
Sbjct: 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63
Query: 416 -NHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
+ + + D + G L+ HL I G
Sbjct: 64 GDCPFIVCMSYAFHTPDKL--SFILDLMNGGDLHYHLSQHGVFS--EADMRFYAAEIILG 119
Query: 475 LKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
L+++H +L + + L E ++S L L+
Sbjct: 120 LEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK 160
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.3 bits (143), Expect = 2e-10
Identities = 31/155 (20%), Positives = 49/155 (31%), Gaps = 9/155 (5%)
Query: 360 EDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH 417
EDF I+G S V I + K Y RE ++R++H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
KL ++ YA NG L +++ T I L+Y
Sbjct: 68 PFFVKLYFTFQDDEKL--YFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEY 123
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512
LH +L + L ED +++ +
Sbjct: 124 LHG---KGIIHRDLKPENILLNEDMHIQITDFGTA 155
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.5 bits (143), Expect = 3e-10
Identities = 31/157 (19%), Positives = 49/157 (31%), Gaps = 10/157 (6%)
Query: 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKL 423
+ IG +V I I Y + RE+ L R HEN +
Sbjct: 14 SYIGEGAYGMVCSAYDNVNKVRVAIK-KISPFEHQTYCQ-RTLREIKILLRFRHENIIGI 71
Query: 424 LGYCRESSPFTRMLVF--DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTE 481
R + V+ + LY+ L +S + I RGLKY+H+
Sbjct: 72 NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSA 128
Query: 482 LGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
+L S + L K+ L+ +
Sbjct: 129 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 162
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.7 bits (141), Expect = 4e-10
Identities = 36/186 (19%), Positives = 64/186 (34%), Gaps = 29/186 (15%)
Query: 356 EVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISL------CIKEEHWTGYLELYFQR 407
E+ + +G V G + + +K + L
Sbjct: 9 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLIS 67
Query: 408 EVADLARI-NHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHY------------- 453
E+ + I H+N LLG C + P ++ +YAS G L E+L
Sbjct: 68 EMEMMKMIGKHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLQARRPPGLEYSYNPS 125
Query: 454 -GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512
Q+S + +ARG++YL + +L + V +TED K++ L+
Sbjct: 126 HNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLA 182
Query: 513 FLLVSS 518
+
Sbjct: 183 RDIHHI 188
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.1 bits (142), Expect = 4e-10
Identities = 32/173 (18%), Positives = 54/173 (31%), Gaps = 18/173 (10%)
Query: 350 FSRQELEVACEDFSN------IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLEL 403
F RQE+ + +GS V I + + +
Sbjct: 4 FYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAK- 62
Query: 404 YFQREVADLARINHENTGKLLGYCRESSPFTR----MLVFDYASNGTLYEHLHYGERCQV 459
RE+ L + HEN LL LV + GT L + ++
Sbjct: 63 RAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLM--KHEKL 118
Query: 460 SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512
R +V + +GL+Y+H +L + + ED K+ L+
Sbjct: 119 GEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLA 168
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.8 bits (136), Expect = 1e-09
Identities = 33/158 (20%), Positives = 54/158 (34%), Gaps = 11/158 (6%)
Query: 364 NIIGSSPDSLVYKGTMKGGPE---IAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
+ +G + VYK K + I I L + E G RE+ L ++H N
Sbjct: 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINR-TALREIKLLQELSHPNI 62
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
LL S LVFD+ + ++ +GL+YLH
Sbjct: 63 IGLLDAFGHKSNI--SLVFDFMETDLEVIIKDNSLVLT--PSHIKAYMLMTLQGLEYLH- 117
Query: 481 ELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
+L + + L E+ K++ L+ S
Sbjct: 118 --QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 153
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.0 bits (137), Expect = 2e-09
Identities = 16/118 (13%), Positives = 38/118 (32%), Gaps = 11/118 (9%)
Query: 365 IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKL 423
++G + V + K E + + +REV R + ++
Sbjct: 19 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPK--------ARREVELHWRASQCPHIVRI 70
Query: 424 LGYCRESSPFTR--MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+ + ++V + G L+ + + +I+ I ++YLH
Sbjct: 71 VDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 128
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.1 bits (134), Expect = 4e-09
Identities = 28/145 (19%), Positives = 56/145 (38%), Gaps = 12/145 (8%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
V+K + + + + E G+ RE+ L + HEN L+ CR +
Sbjct: 26 VFKARHRKTGQKVALKKVLMENEKEGFPI-TALREIKILQLLKHENVVNLIEICRTKASP 84
Query: 434 TRM------LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFT 487
LVFD+ + + + +S +R ++ + GL Y+H
Sbjct: 85 YNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR--VMQMLLNGLYYIHR---NKIL 139
Query: 488 ISELNSSAVYLTEDFSPKVSPLCLS 512
++ ++ V +T D K++ L+
Sbjct: 140 HRDMKAANVLITRDGVLKLADFGLA 164
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.0 bits (129), Expect = 1e-08
Identities = 32/149 (21%), Positives = 50/149 (33%), Gaps = 10/149 (6%)
Query: 374 VYKGTMKG-GPEIAV--ISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430
V K K G + A I + G +REV+ L I H N L
Sbjct: 26 VKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK 85
Query: 431 SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISE 490
+ +L+ + + G L++ L E + I G+ YLH+ +
Sbjct: 86 TDV--ILILELVAGGELFDFLAEKESLTEEEATE--FLKQILNGVYYLHS---LQIAHFD 138
Query: 491 LNSSAVYLTEDFSPKVSPLCLSFLLVSSI 519
L + L + PK + F L I
Sbjct: 139 LKPENIMLLDRNVPKPRIKIIDFGLAHKI 167
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 54.1 bits (129), Expect = 1e-08
Identities = 25/152 (16%), Positives = 47/152 (30%), Gaps = 9/152 (5%)
Query: 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKL 423
IG +VYK G A+ I+ E + RE++ L + H N KL
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALK--KIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 424 LGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELG 483
+LVF++ + ++ + G+ Y H
Sbjct: 66 YDVIHT--KKRLVLVFEHLDQDLKKLLDV--CEGGLESVTAKSFLLQLLNGIAYCHD--- 118
Query: 484 PPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
+L + + + K++ L+
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAF 150
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.0 bits (129), Expect = 1e-08
Identities = 21/123 (17%), Positives = 37/123 (30%), Gaps = 7/123 (5%)
Query: 360 EDFS--NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARIN 416
EDF ++G V+ K A+ +L +E +
Sbjct: 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
H + + V +Y + G L H+ + +R I GL+
Sbjct: 62 HPFLTHMFCTFQTKENL--FFVMEYLNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGLQ 117
Query: 477 YLH 479
+LH
Sbjct: 118 FLH 120
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.8 bits (123), Expect = 8e-08
Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 12/146 (8%)
Query: 374 VYKGTMK--GGPEIAVISLCIKEEHWTGYLELYFQREVA---DLARINHENTGKLLGYCR 428
V+K GG +A+ ++ + + L REVA L H N +L C
Sbjct: 23 VFKARDLKNGGRFVALK--RVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCT 80
Query: 429 ESSP--FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPF 486
S T++ + + L +L V ++ + RGL +LH+
Sbjct: 81 VSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RV 137
Query: 487 TISELNSSAVYLTEDFSPKVSPLCLS 512
+L + +T K++ L+
Sbjct: 138 VHRDLKPQNILVTSSGQIKLADFGLA 163
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.4 bits (122), Expect = 1e-07
Identities = 27/158 (17%), Positives = 58/158 (36%), Gaps = 9/158 (5%)
Query: 360 EDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH 417
E+F IG +VYK K E+ + I+ + T + RE++ L +NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALK-KIRLDTETEGVPSTAIREISLLKELNH 60
Query: 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
N KLL + ++ + + L + + + + + +GL +
Sbjct: 61 PNIVKLLDVIHTEN---KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
H+ +L + + + + K++ L+
Sbjct: 118 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAF 152
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 51.0 bits (121), Expect = 1e-07
Identities = 15/107 (14%), Positives = 35/107 (32%), Gaps = 10/107 (9%)
Query: 374 VYKGT-MKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432
+Y GT + G E+A+ C+K +H E + + +C
Sbjct: 23 IYLGTDIAAGEEVAIKLECVKTKHPQ------LHIESKIYKMMQGGVGIPTIRWCGAEGD 76
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+ ++V + + S + + + ++Y+H
Sbjct: 77 Y-NVMVMELLGPSLEDLFNFCSRK--FSLKTVLLLADQMISRIEYIH 120
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 50.9 bits (121), Expect = 2e-07
Identities = 23/155 (14%), Positives = 53/155 (34%), Gaps = 9/155 (5%)
Query: 360 EDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH 417
+DF +G+ V+ + + + KE + E L+ + H
Sbjct: 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 63
Query: 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
++ G +++ ++ DY G L+ L +R + + L+Y
Sbjct: 64 PFIIRMWGTFQDAQQI--FMIMDYIEGGELFSLLRKSQRFPNPVAKF--YAAEVCLALEY 119
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512
LH+ +L + L ++ K++ +
Sbjct: 120 LHS---KDIIYRDLKPENILLDKNGHIKITDFGFA 151
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 49.8 bits (117), Expect = 4e-07
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 12/82 (14%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L+EL + N LI + L RL+ L N L +P NL +++++ N
Sbjct: 283 PPSLEELNVSNNKLIELPA----LPPRLERLIASFNHLAE-VPELPQNLK---QLHVEYN 334
Query: 153 GLTGRLPAELGNLISLEELHLD 174
L P S+E+L ++
Sbjct: 335 PLRE-FPDIPE---SVEDLRMN 352
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 49.8 bits (117), Expect = 4e-07
Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 8/80 (10%)
Query: 101 LHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPA 160
+ N I L L+ L++ N+L +P L L N L +P
Sbjct: 267 YYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPALPPRLERL---IASFNHLA-EVPE 321
Query: 161 ELGNLISLEELHLDRNRLQG 180
N L++LH++ N L+
Sbjct: 322 LPQN---LKQLHVEYNPLRE 338
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 41.3 bits (95), Expect = 2e-04
Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148
L L+ LI N+L + L + LK L + N L P ++ L ++N
Sbjct: 301 ALPPRLERLIASFNHLAEVPE----LPQNLKQLHVEYNPLRE-FPDIPESVEDL-RMN 352
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.2 bits (115), Expect = 8e-07
Identities = 19/90 (21%), Positives = 34/90 (37%), Gaps = 5/90 (5%)
Query: 96 LQELILHGNNLIGIIPKEL-GLLKRLKILDLGTNQLTG----PIPPEIGNLTGLVKINLQ 150
+Q L + L EL LL++ +++ L LT I + L ++NL+
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 151 SNGLTGRLPAELGNLISLEELHLDRNRLQG 180
SN L + + + + LQ
Sbjct: 64 SNELGDVGVHCVLQGLQTPSCKIQKLSLQN 93
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.0 bits (104), Expect = 2e-05
Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 5/67 (7%)
Query: 120 LKILDLGTNQLTGPIPPEI-GNLTGLVKINLQSNGLTGR----LPAELGNLISLEELHLD 174
++ LD+ +L+ E+ L + L GLT + + L +L EL+L
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 175 RNRLQGA 181
N L
Sbjct: 64 SNELGDV 70
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.2 bits (102), Expect = 3e-05
Identities = 18/88 (20%), Positives = 27/88 (30%), Gaps = 5/88 (5%)
Query: 74 KINISGSSLKGFLAPEL-GLLTYLQELILHGNNL----IGIIPKELGLLKRLKILDLGTN 128
++I L EL LL Q + L L I L + L L+L +N
Sbjct: 6 SLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSN 65
Query: 129 QLTGPIPPEIGNLTGLVKINLQSNGLTG 156
+L + +Q L
Sbjct: 66 ELGDVGVHCVLQGLQTPSCKIQKLSLQN 93
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.0 bits (99), Expect = 7e-05
Identities = 14/81 (17%), Positives = 26/81 (32%), Gaps = 9/81 (11%)
Query: 94 TYLQELILHGNNL----IGIIPKELGLLKRLKILDLGTNQLTGPIPPEIG-----NLTGL 144
+ L+ L L ++ + L L+ LDL N L ++ L
Sbjct: 369 SVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLL 428
Query: 145 VKINLQSNGLTGRLPAELGNL 165
++ L + + L L
Sbjct: 429 EQLVLYDIYWSEEMEDRLQAL 449
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.6 bits (90), Expect = 9e-04
Identities = 12/75 (16%), Positives = 26/75 (34%), Gaps = 9/75 (12%)
Query: 118 KRLKILDLGTNQLTG----PIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLI-----SL 168
L++L L ++ + + L +++L +N L +L + L
Sbjct: 369 SVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLL 428
Query: 169 EELHLDRNRLQGAVP 183
E+L L +
Sbjct: 429 EQLVLYDIYWSEEME 443
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 48.7 bits (115), Expect = 9e-07
Identities = 20/123 (16%), Positives = 41/123 (33%), Gaps = 14/123 (11%)
Query: 360 EDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN- 416
+D+ +G S V++ E V+ + + +RE+ L +
Sbjct: 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK------IKREIKILENLRG 88
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
N L ++ T LVF++ +N + ++ + I + L
Sbjct: 89 GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALD 143
Query: 477 YLH 479
Y H
Sbjct: 144 YCH 146
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.0 bits (113), Expect = 1e-06
Identities = 19/139 (13%), Positives = 44/139 (31%), Gaps = 8/139 (5%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
V+K + EI + ++ + + RE+ L + H+N +L
Sbjct: 18 VFKAKNRETHEIVALK-RVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS--DK 74
Query: 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNS 493
LVF++ + + +GL + H+ +L
Sbjct: 75 KLTLVFEFCDQDLKKYFDSCNGDLD--PEIVKSFLFQLLKGLGFCHS---RNVLHRDLKP 129
Query: 494 SAVYLTEDFSPKVSPLCLS 512
+ + + K++ L+
Sbjct: 130 QNLLINRNGELKLANFGLA 148
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.6 bits (112), Expect = 2e-06
Identities = 25/139 (17%), Positives = 42/139 (30%), Gaps = 13/139 (9%)
Query: 350 FSRQELEVACEDFSN------IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLEL 403
F RQEL + +GS V + + + +
Sbjct: 4 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK- 62
Query: 404 YFQREVADLARINHENTGKLLGYCRESSP---FTRMLVFDYASNGTLYEHLHYGERCQVS 460
RE+ L + HEN LL + F + + + L + +
Sbjct: 63 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--- 119
Query: 461 WTRRMKIVIGIARGLKYLH 479
++ I RGLKY+H
Sbjct: 120 DDHVQFLIYQILRGLKYIH 138
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.1 bits (110), Expect = 2e-06
Identities = 34/175 (19%), Positives = 59/175 (33%), Gaps = 5/175 (2%)
Query: 53 LDADPCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPK 112
LD G + + + ++L+ L L L LHGN + + +
Sbjct: 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPER 171
Query: 113 ELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELH 172
L L L L N++ P +L L+ + L +N L+ L L +L+ L
Sbjct: 172 AFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLR 231
Query: 173 LDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLC--HLSQLKVADFSYNFFVG 225
L+ N A + SS+ + L+ + + N G
Sbjct: 232 LNDNPWVCDCR---ARPLWAWLQKFRGSSSEVPCSLPQRLAGRDLKRLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.5 bits (85), Expect = 0.003
Identities = 40/178 (22%), Positives = 57/178 (32%), Gaps = 11/178 (6%)
Query: 65 CSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILD 124
C + + + L+ P G+ Q + LHGN + + + L IL
Sbjct: 6 CVCYNEPKVTTSCPQQGLQAV--PV-GIPAASQRIFLHGNRISHVPAASFRACRNLTILW 62
Query: 125 LGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRL-PAELGNLISLEELHLDRNRLQGAVP 183
L +N L L L +++L N + PA L L LHLDR LQ P
Sbjct: 63 LHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGP 122
Query: 184 AGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
A + +Y L L L L N + L S
Sbjct: 123 --GLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHS 178
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.5 bits (112), Expect = 2e-06
Identities = 27/152 (17%), Positives = 46/152 (30%), Gaps = 7/152 (4%)
Query: 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
D+ ++G V K + + KE + E L H
Sbjct: 8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
L + V +YA+ G L+ HL + R I L+YLH+
Sbjct: 68 TALKYAFQTHDRL--CFVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHS 123
Query: 481 ELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512
++ + L +D K++ L
Sbjct: 124 ---RDVVYRDIKLENLMLDKDGHIKITDFGLC 152
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 47.5 bits (112), Expect = 2e-06
Identities = 21/122 (17%), Positives = 39/122 (31%), Gaps = 6/122 (4%)
Query: 360 EDFSNI--IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH 417
+ F I +G+ V K + + K++ + E L +N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
KL ++ +V +Y + G ++ HL + S I +Y
Sbjct: 101 PFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEY 156
Query: 478 LH 479
LH
Sbjct: 157 LH 158
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 45.5 bits (107), Expect = 3e-06
Identities = 21/122 (17%), Positives = 39/122 (31%), Gaps = 13/122 (10%)
Query: 364 NIIGSSPDSLVYKGTMKGGPEIAV------ISLCIKEEHWTGYLELYFQREVADLARINH 417
++G +S V+ + E V + K + Y +L+F AR
Sbjct: 6 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEF 65
Query: 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
KL G V+ + N L E + E +V +++ I +
Sbjct: 66 RALQKLQGLAV-------PKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAK 118
Query: 478 LH 479
+
Sbjct: 119 FY 120
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.0 bits (103), Expect = 7e-06
Identities = 22/102 (21%), Positives = 35/102 (34%), Gaps = 3/102 (2%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG--PIPPEIGNLTGLV 145
P+L L +++ + + L L+L N+L + + L
Sbjct: 36 PDLVAQNIDVVLNR-RSSMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLK 94
Query: 146 KINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSN 187
+NL N L + + LEEL LD N L S
Sbjct: 95 ILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQST 136
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 42.8 bits (100), Expect = 1e-05
Identities = 26/121 (21%), Positives = 38/121 (31%), Gaps = 29/121 (23%)
Query: 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL---------- 120
RVL +++ L L L + L L N L + P L L+ L
Sbjct: 1 RVL--HLAHKDLTVL--CHLEQLLLVTHLDLSHNRLRALPP-ALAALRCLEVLQASDNAL 55
Query: 121 ------------KILDLGTNQLTG-PIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLIS 167
+ L L N+L + + LV +NLQ N L L
Sbjct: 56 ENVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ-EEGIQERLAE 114
Query: 168 L 168
+
Sbjct: 115 M 115
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 37.8 bits (87), Expect = 6e-04
Identities = 19/91 (20%), Positives = 34/91 (37%), Gaps = 3/91 (3%)
Query: 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG 206
++L LT L L+ + L L NRL+ PA + + + N+ G
Sbjct: 3 LHLAHKDLTV--LCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDG 60
Query: 207 LCHLSQLKVADFSYNFFVG-SIPKCLEYLPS 236
+ +L +L+ N + + L P
Sbjct: 61 VANLPRLQELLLCNNRLQQSAAIQPLVSCPR 91
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.2 bits (98), Expect = 3e-05
Identities = 25/140 (17%), Positives = 44/140 (31%), Gaps = 10/140 (7%)
Query: 87 APELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVK 146
A + +EL L G I +I L + +D N++ L L
Sbjct: 11 AAQYTNAVRDRELDLRGYK-IPVIENLGATLDQFDAIDFSDNEI--RKLDGFPLLRRLKT 67
Query: 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSAN--- 203
+ + +N + L L EL L N L + + + +
Sbjct: 68 LLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNK 127
Query: 204 ----LTGLCHLSQLKVADFS 219
L + + Q++V DF
Sbjct: 128 KHYRLYVIYKVPQVRVLDFQ 147
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.6 bits (101), Expect = 3e-05
Identities = 15/126 (11%), Positives = 43/126 (34%), Gaps = 3/126 (2%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++++G +L + L L + + + + + R++ +DL + +
Sbjct: 4 TLDLTGKNLHPDVTGRL-LSQGVIAFRCPRSFMDQPLAEHFSPF-RVQHMDLSNSVIEVS 61
Query: 134 IPPEI-GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTA 192
I + L ++L+ L+ + L +L L+L + +
Sbjct: 62 TLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCS 121
Query: 193 NIHGMY 198
+ +
Sbjct: 122 RLDELN 127
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.8 bits (102), Expect = 3e-05
Identities = 16/110 (14%), Positives = 32/110 (29%), Gaps = 10/110 (9%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
V I + + + RE+ + +NH+N LL
Sbjct: 33 VCAAYDAVLDRNVAIKKLSRPFQNQTHAK-RAYRELVLMKCVNHKNIISLLNVFTPQKTL 91
Query: 434 ----TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
LV + + ++ R ++ + G+K+LH
Sbjct: 92 EEFQDVYLVMELMDANLCQVI-----QMELDHERMSYLLYQMLCGIKHLH 136
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 42.7 bits (99), Expect = 4e-05
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
L L+ L L N + I P L L L + L NQ++ P + N + L +
Sbjct: 167 TPLANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIV 222
Query: 148 NLQSN 152
L +N
Sbjct: 223 TL-TN 226
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 41.6 bits (96), Expect = 1e-04
Identities = 19/102 (18%), Positives = 26/102 (25%), Gaps = 6/102 (5%)
Query: 29 FWALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKINI-SGSSLKGFLA 87
L I L + A L + +
Sbjct: 131 LQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDI-- 188
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQ 129
L L L E+ L N + + P L L I+ L TNQ
Sbjct: 189 SPLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTL-TNQ 227
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 38.5 bits (88), Expect = 0.001
Identities = 12/63 (19%), Positives = 26/63 (41%), Gaps = 4/63 (6%)
Query: 117 LKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRN 176
L + G + +T + +L G+ ++ G+T + + L +L L L N
Sbjct: 18 LANAIKIAAGKSNVTDTVTQA--DLDGITTLSAFGTGVTT-IEG-VQYLNNLIGLELKDN 73
Query: 177 RLQ 179
++
Sbjct: 74 QIT 76
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.8 bits (97), Expect = 1e-04
Identities = 28/164 (17%), Positives = 53/164 (32%), Gaps = 12/164 (7%)
Query: 360 EDFS--NIIGSSPDSLVYKG----TMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLA 413
E+F ++G+ V+ G A+ L + + E L
Sbjct: 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83
Query: 414 RINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIAR 473
I L + + L+ DY + G L+ HL +R + + V I
Sbjct: 84 HIRQSPFLVTL-HYAFQTETKLHLILDYINGGELFTHLS--QRERFTEHEVQIYVGEIVL 140
Query: 474 GLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517
L++LH ++ + L + ++ LS V+
Sbjct: 141 ALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVA 181
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.2 bits (95), Expect = 2e-04
Identities = 15/60 (25%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
+ E+ NL + P +L K IL L N L + T L ++NL
Sbjct: 9 VASHLEVNCDKRNLTAL-PPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRA 65
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.3 bits (90), Expect = 7e-04
Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 3/61 (4%)
Query: 117 LKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRN 176
+ ++ LT +PP++ ++L N L A L L +L+LDR
Sbjct: 9 VASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRA 65
Query: 177 R 177
Sbjct: 66 E 66
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.2 bits (87), Expect = 0.002
Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 4/55 (7%)
Query: 137 EIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYT 191
E+ + +++N LT LP +L LHL N L + YT
Sbjct: 5 EVSKVASHLEVNCDKRNLT-ALPPDLPK--DTTILHLSENLLYT-FSLATLMPYT 55
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.2 bits (87), Expect = 0.002
Identities = 15/51 (29%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Query: 102 HGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
NNL + L L+ L L L N L IP L L N
Sbjct: 156 ANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.8 bits (86), Expect = 0.002
Identities = 15/65 (23%), Positives = 20/65 (30%), Gaps = 4/65 (6%)
Query: 65 CSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILD 124
S L++N +L P L L L N L L RL L+
Sbjct: 6 VSKV-ASHLEVNCDKRNLTAL--PP-DLPKDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 125 LGTNQ 129
L +
Sbjct: 62 LDRAE 66
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 39.6 bits (91), Expect = 4e-04
Identities = 10/82 (12%), Positives = 25/82 (30%), Gaps = 4/82 (4%)
Query: 117 LKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRN 176
+L +T + L + +I ++ + + L ++ +L L+ N
Sbjct: 23 FAETIKDNLKKKSVTDAVTQN--ELNSIDQIIANNSDIKSVQG--IQYLPNVTKLFLNGN 78
Query: 177 RLQGAVPAGSNSGYTANIHGMY 198
+L P +
Sbjct: 79 KLTDIKPLANLKNLGWLFLDEN 100
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 39.4 bits (91), Expect = 7e-04
Identities = 14/139 (10%), Positives = 35/139 (25%), Gaps = 11/139 (7%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
+++GT + I + + E + + Y +
Sbjct: 21 IFEGTNLLNNQQVAIKFEPRRSD-----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLH 75
Query: 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNS 493
+LV D G E L + S + ++ +H ++
Sbjct: 76 -NVLVIDLL--GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKP 129
Query: 494 SAVYLTEDFSPKVSPLCLS 512
+ S + + +
Sbjct: 130 DNFLIGRPNSKNANMIYVV 148
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 521 | |||
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 99.98 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 99.98 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.98 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 99.97 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 99.97 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 99.97 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 99.97 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 99.97 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 99.97 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 99.97 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 99.97 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 99.97 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 99.97 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 99.97 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 99.97 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 99.97 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 99.97 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 99.97 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 99.97 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 99.96 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 99.96 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 99.96 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 99.96 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 99.96 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 99.96 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 99.96 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 99.96 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 99.96 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 99.96 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 99.96 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 99.96 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 99.96 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 99.96 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 99.96 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 99.96 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 99.96 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 99.96 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 99.96 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 99.96 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 99.95 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 99.95 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 99.95 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 99.95 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 99.95 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 99.95 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 99.95 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 99.95 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 99.94 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 99.94 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 99.94 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 99.94 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 99.94 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 99.94 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 99.93 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 99.93 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 99.93 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 99.92 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 99.92 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 99.91 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 99.91 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.87 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 99.82 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.82 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.81 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.78 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.77 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.74 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.71 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.71 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.64 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.62 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.6 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.56 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.56 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.52 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.52 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.51 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.51 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.51 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.51 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.5 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.48 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.43 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.39 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.36 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.36 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.26 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.23 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.2 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.2 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.1 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 98.9 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 98.75 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 98.66 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 98.6 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 98.44 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.32 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.32 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.3 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 98.22 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 98.15 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.66 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 97.57 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.33 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 96.99 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 96.74 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 95.89 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 95.87 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 95.54 |
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.4e-33 Score=273.95 Aligned_cols=160 Identities=24% Similarity=0.368 Sum_probs=128.8
Q ss_pred ccCHHHHHHHHhhhh-----------chhCcCCCeeEEEEEeC-CCC---EEEEEEeeeeccccchhhHHHHHHHHHHHh
Q 009965 349 RFSRQELEVACEDFS-----------NIIGSSPDSLVYKGTMK-GGP---EIAVISLCIKEEHWTGYLELYFQREVADLA 413 (521)
Q Consensus 349 ~~~~~~l~~~~~~~~-----------~~ig~G~~g~Vy~~~~~-~~~---~vavk~~~~~~~~~~~~~~~~~~~E~~~l~ 413 (521)
.++++|+..++.+|+ ++||+|+||+||+|+++ +++ .||||++... ......++|.+|+++++
T Consensus 6 ~~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~ 82 (299)
T d1jpaa_ 6 PFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSG---YTEKQRRDFLSEASIMG 82 (299)
T ss_dssp GGGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSS---CCHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcc---cCHHHHHHHHHHHHHHH
Confidence 355667777777764 57999999999999986 332 5788876432 22344568999999999
Q ss_pred ccCCCCccceeeEEecCCCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCC
Q 009965 414 RINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNS 493 (521)
Q Consensus 414 ~l~H~niv~l~g~~~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~ 493 (521)
+++|||||+++|+|.+.+ ..++||||+++|+|.+++.... ..++|.++.+|+.|||+||+|||+. +|+||||||
T Consensus 83 ~l~HpnIv~l~g~~~~~~--~~~iv~Ey~~~g~L~~~~~~~~-~~l~~~~~~~i~~qia~gl~yLH~~---~iiHrDlKp 156 (299)
T d1jpaa_ 83 QFDHPNVIHLEGVVTKST--PVMIITEFMENGSLDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLADM---NYVHRDLAA 156 (299)
T ss_dssp TCCCTTBCCEEEEECSSS--SCEEEEECCTTEEHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCG
T ss_pred hCCCCCCccEEEEEeeCC--EEEEEEEecCCCcceeeecccc-CCCCHHHHHHHHHHHHHHHHHHhhC---CCccCcccc
Confidence 999999999999998876 7899999999999999887433 3599999999999999999999998 999999999
Q ss_pred CCeeecCCCCeeeCCCchhhhccc
Q 009965 494 SAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 494 ~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
+|||+|+++.+||+|||+|+.+.+
T Consensus 157 ~NILl~~~~~~Kl~DFGla~~~~~ 180 (299)
T d1jpaa_ 157 RNILVNSNLVCKVSDFGLSRFLED 180 (299)
T ss_dssp GGEEECTTCCEEECCC--------
T ss_pred ceEEECCCCcEEECCcccceEccC
Confidence 999999999999999999997754
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.6e-33 Score=272.08 Aligned_cols=144 Identities=24% Similarity=0.332 Sum_probs=130.5
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|++. +++.||||++.... ...++|.+|+.++++++|||||+++|+|.+.+ ..++||||+
T Consensus 23 ~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-----~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~--~~~iv~E~~ 95 (287)
T d1opja_ 23 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--PFYIITEFM 95 (287)
T ss_dssp EETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCEEEEECC
T ss_pred eEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-----chHHHHHHHHHHHHhCCCCCEecCCccEeeCC--eeEEEeecc
Confidence 78999999999999987 58899999874322 22457999999999999999999999998876 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.......++|..+..|+.|||+||+|||+. +|+||||||+|||+|+++.+||+|||+|+.+..
T Consensus 96 ~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~---~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~ 167 (287)
T d1opja_ 96 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 167 (287)
T ss_dssp TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCCTTTCCS
T ss_pred cCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHC---CcccCccccCeEEECCCCcEEEccccceeecCC
Confidence 999999999766666799999999999999999999998 999999999999999999999999999998754
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=4.1e-33 Score=268.65 Aligned_cols=143 Identities=17% Similarity=0.318 Sum_probs=127.8
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||+||+|++++++.||||++.... ...++|.+|++++++++|||||+++|+|.++ ..++||||++
T Consensus 19 ~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-----~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~---~~~iv~Ey~~ 90 (272)
T d1qpca_ 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-----MSPDAFLAEANLMKQLQHQRLVRLYAVVTQE---PIYIITEYME 90 (272)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECTTS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECSS---SCEEEEECCT
T ss_pred EEEecCCCcEEEEEEECCCCEEEEEEEccCc-----CCHHHHHHHHHHHHhCCCCCEeEEEeeeccC---CeEEEEEeCC
Confidence 7899999999999999988899999984322 2245799999999999999999999998654 4799999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
+|+|.+++.......++|.++++|+.|||+||+|||+. +|+||||||+|||+|+++.+||+|||+|+.+.+
T Consensus 91 ~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~---~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~ 161 (272)
T d1qpca_ 91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 161 (272)
T ss_dssp TCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred CCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccchhheeeecccceeeccccceEEccC
Confidence 99999988655445699999999999999999999998 999999999999999999999999999998754
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=8.2e-33 Score=265.27 Aligned_cols=143 Identities=21% Similarity=0.301 Sum_probs=123.7
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||+||+|++.+++.||||++.... ...++|.+|+.++++++|||||+++|+|.+.+ ..++||||++
T Consensus 11 ~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-----~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~--~~~lv~E~~~ 83 (263)
T d1sm2a_ 11 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-----MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA--PICLVFEFME 83 (263)
T ss_dssp EEEECCSSCCEEEEEETTTEEEEEEECCSSS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCEEEEECCT
T ss_pred EEEeeCCCeEEEEEEECCCCEEEEEEECCCc-----CcHHHHHHHHHHHHhcCCCCcccccceeccCC--ceEEEEEecC
Confidence 7899999999999999988899999985322 22467999999999999999999999998877 7899999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
+|+|.+++... ...++|..+..|+.|||+||+|||+. +|+||||||+|||+|+++.+||+|||+|+.+.+
T Consensus 84 ~g~L~~~l~~~-~~~~~~~~~~~i~~qia~gl~~lH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~ 153 (263)
T d1sm2a_ 84 HGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 153 (263)
T ss_dssp TCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCTTCSGGGEEECGGGCEEECSCC-------
T ss_pred CCcHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHhhhcc---ceeecccchhheeecCCCCeEecccchheeccC
Confidence 99999998643 34689999999999999999999998 999999999999999999999999999987654
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.98 E-value=2.3e-32 Score=269.13 Aligned_cols=223 Identities=29% Similarity=0.470 Sum_probs=182.8
Q ss_pred CchhHHHHHHHHHHhcccCCCCCCCCCCCCCCCCC--CccceeeCCCC--CCEEEEEecCCCCCc--cCCccccCCCCCC
Q 009965 24 FATNEFWALTTFKEAIYEDPHLVLSNWNALDADPC--HWTGIACSDAR--DRVLKINISGSSLKG--FLAPELGLLTYLQ 97 (521)
Q Consensus 24 ~~~~~~~~L~~~k~~~~~~~~~~l~~W~~~~~~~c--~w~gv~C~~~~--~~l~~L~L~~n~l~~--~~p~~l~~l~~L~ 97 (521)
|.++|++||++||+++. ||. .+++|.. +.||| .|.||+|+... .||+.|+|++|+++| .+|+++++|++|+
T Consensus 3 c~~~e~~aLl~~k~~~~-~~~-~l~sW~~-~~d~C~~~w~gv~C~~~~~~~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~ 79 (313)
T d1ogqa_ 3 CNPQDKQALLQIKKDLG-NPT-TLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLN 79 (313)
T ss_dssp SCHHHHHHHHHHHHHTT-CCG-GGTTCCT-TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCS
T ss_pred CCHHHHHHHHHHHHHCC-CCC-cCCCCCC-CCCCCCCcCCCeEEeCCCCcEEEEEEECCCCCCCCCCCCChHHhcCcccc
Confidence 67899999999999996 553 6899975 56899 59999998633 389999999999998 5889999999999
Q ss_pred EEECcC-CcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecccccCcccCchhhhCCCCCCEEeCCCC
Q 009965 98 ELILHG-NNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRN 176 (521)
Q Consensus 98 ~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 176 (521)
+|+|++ |+++|.+|.+|++|++|++|+|++|++.+..|..+..+..|+++++++|.+.+.+|..++++++|+.+++++|
T Consensus 80 ~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n 159 (313)
T d1ogqa_ 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred ccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCcccceeecccc
Confidence 999996 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCCCc--c-c-------------------------------------------ccccccccccCCcCc----
Q 009965 177 RLQGAVPAGSNSG--Y-T-------------------------------------------ANIHGMYASSANLTG---- 206 (521)
Q Consensus 177 ~l~g~~p~~~~~~--~-~-------------------------------------------~~l~~l~l~~n~l~~---- 206 (521)
.++|.+|...... + . ..+..++++.|.+.+
T Consensus 160 ~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~ 239 (313)
T d1ogqa_ 160 RISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK 239 (313)
T ss_dssp CCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9998888632110 0 0 011122333333332
Q ss_pred ccCCCCCCEEeccCCccccCCcccccc---CCCcccCCCcCCCCCC
Q 009965 207 LCHLSQLKVADFSYNFFVGSIPKCLEY---LPSTSFQGNCLQNKDP 249 (521)
Q Consensus 207 ~~~l~~L~~L~ls~N~l~g~ip~~l~~---l~~l~~~~N~l~~~~~ 249 (521)
+..+++|+.|+|++|+|+|.+|..+.+ |+.+++++|++++..|
T Consensus 240 ~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP 285 (313)
T d1ogqa_ 240 VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285 (313)
T ss_dssp CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECC
T ss_pred cccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCC
Confidence 334678999999999999999987755 5667889998875433
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2.1e-32 Score=262.92 Aligned_cols=143 Identities=20% Similarity=0.272 Sum_probs=126.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +|+.||||++..+.. ....+++.+|++++++++|||||++++++.+.+ ..++||||+
T Consensus 11 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~---~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~--~~~ivmEy~ 85 (271)
T d1nvra_ 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA---VDCPENIKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYC 85 (271)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECC----------CHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEehhhc---chHHHHHHHHHHHHHhCCCCCEeeEeeeeccCc--eeEEEEecc
Confidence 78999999999999986 789999999864432 123456899999999999999999999999887 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++..+ ..+++.++..|+.|+++||+|||+. +|+||||||+|||+++++.+||+|||+|+.+.
T Consensus 86 ~gg~L~~~l~~~--~~l~e~~~~~i~~qi~~al~ylH~~---~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~ 154 (271)
T d1nvra_ 86 SGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFR 154 (271)
T ss_dssp TTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECE
T ss_pred CCCcHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHc---CCccCcccHHHEEECCCCCEEEccchhheeec
Confidence 999999999643 3599999999999999999999999 99999999999999999999999999999764
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=4.9e-32 Score=261.35 Aligned_cols=142 Identities=28% Similarity=0.442 Sum_probs=123.8
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||+||+|++++ .||||++..... .....++|.+|+.++.+++|||||+++|++.++ ..++||||++
T Consensus 14 ~~lG~G~fg~Vy~~~~~~--~vAvK~~~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~~---~~~lv~Ey~~ 86 (276)
T d1uwha_ 14 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAP--TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP---QLAIVTQWCE 86 (276)
T ss_dssp SEEEECSSCEEEEEESSS--EEEEEECCCSSC--CTTHHHHHHHHHHHHTTCCCTTBCCEEEEECSS---SCEEEEECCC
T ss_pred EEEeeCCCcEEEEEEECC--EEEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeeeeEEEecc---EEEEEEecCC
Confidence 789999999999998754 599999854322 234467899999999999999999999998654 5799999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+|+|.++++... ..++|.++..|+.|||+||+|||+. +||||||||+|||+|+++.+||+|||+|+...
T Consensus 87 ~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~gl~yLH~~---~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~ 155 (276)
T d1uwha_ 87 GSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 155 (276)
T ss_dssp EEEHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTSSEEECCCCCSCC--
T ss_pred CCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHhcC---CEeccccCHHHEEEcCCCCEEEccccceeecc
Confidence 999999997433 3599999999999999999999998 99999999999999999999999999998765
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1e-31 Score=256.51 Aligned_cols=144 Identities=19% Similarity=0.303 Sum_probs=129.2
Q ss_pred hchhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
.+.||+|+||+||+|++++++.||||++..... .+++|.+|+.++++++|||||+++|+|.+++ ..++||||+
T Consensus 9 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~-----~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~--~~~iv~Ey~ 81 (258)
T d1k2pa_ 9 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-----SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR--PIFIITEYM 81 (258)
T ss_dssp CCCCCEETTEEEEEEEETTTEEEEEEEEESSSS-----CHHHHHHHHHHHHTCCCTTBCCEEEEECCSS--SEEEEEECC
T ss_pred eEEEecCCCeEEEEEEECCCCEEEEEEECcCcC-----CHHHHHHHHHHHHhcCCCceeeEEEEEeeCC--ceEEEEEcc
Confidence 478999999999999999888999999854322 2457999999999999999999999998876 799999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++... ...++|..+.+|+.|+|+||+|||+. +|+||||||+|||+|+++.+||+|||+++.+..
T Consensus 82 ~~g~l~~~~~~~-~~~~~~~~~~~i~~qi~~gl~~LH~~---~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 152 (258)
T d1k2pa_ 82 ANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 152 (258)
T ss_dssp TTEEHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TBCCSCCSGGGEEECTTCCEEECCCSSCCBCSS
T ss_pred CCCcHHHhhhcc-ccCCcHHHHHHHHHHHHHHHHHHhhc---CcccccccceeEEEcCCCcEEECcchhheeccC
Confidence 999999997633 33589999999999999999999998 999999999999999999999999999987654
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.1e-31 Score=256.77 Aligned_cols=146 Identities=21% Similarity=0.264 Sum_probs=129.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.+ +++.||+|++..... ......+.+.+|+.++++++|||||++++++.+.+ ..++||||+
T Consensus 12 ~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~ivmEy~ 88 (263)
T d2j4za1 12 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQL-EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT--RVYLILEYA 88 (263)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred EEEecCCCcEEEEEEECCCCcEEEEEEEchHHc-cChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECC--EEEEEEeec
Confidence 78999999999999996 688999999854321 12234567899999999999999999999999877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.... .+++..+..|+.||++||+|||+. +|+||||||+|||+++++.+||+|||+|+....
T Consensus 89 ~~g~L~~~l~~~~--~l~e~~~~~i~~qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~ 158 (263)
T d2j4za1 89 PLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 158 (263)
T ss_dssp TTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCSCSCCCC
T ss_pred CCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeeeeccccceecCCCCEeecccceeeecCC
Confidence 9999999996433 489999999999999999999999 999999999999999999999999999987654
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=8.2e-32 Score=258.78 Aligned_cols=156 Identities=21% Similarity=0.227 Sum_probs=123.2
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceE
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
++|. +.||+|+||+||+|+.. +|+.||||.+..... .....+.+.+|++++++++|||||++++++.+......|
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~--~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ 81 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM--TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY 81 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTS--CHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEE
T ss_pred hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhC--CHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEE
Confidence 3454 78999999999999986 789999999854332 233456799999999999999999999999764433689
Q ss_pred EEEecCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCC--CCCeEecCCCCCCeeecCCCCeeeCCCchh
Q 009965 437 LVFDYASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTEL--GPPFTISELNSSAVYLTEDFSPKVSPLCLS 512 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivH~Dlk~~NiLld~~~~~kl~DfGla 512 (521)
+||||+++|+|.+++... ....+++..+..|+.|++.||+|||+.. ..+|+||||||+|||+++++.+||+|||+|
T Consensus 82 ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a 161 (269)
T d2java1 82 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 161 (269)
T ss_dssp EEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHH
T ss_pred EEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccce
Confidence 999999999999998632 2346999999999999999999999861 125999999999999999999999999999
Q ss_pred hhccc
Q 009965 513 FLLVS 517 (521)
Q Consensus 513 ~~~~~ 517 (521)
+.+.+
T Consensus 162 ~~~~~ 166 (269)
T d2java1 162 RILNH 166 (269)
T ss_dssp HHC--
T ss_pred eeccc
Confidence 98754
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2e-31 Score=258.16 Aligned_cols=143 Identities=22% Similarity=0.292 Sum_probs=124.6
Q ss_pred hhCcCCCeeEEEEEeC---CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEec
Q 009965 365 IIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 365 ~ig~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
.||+|+||+||+|.++ ++..||||.+.... .....++|.+|++++++++|||||+++|+|.++ ..++||||
T Consensus 16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~---~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~---~~~lvmE~ 89 (285)
T d1u59a_ 16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE---ALMLVMEM 89 (285)
T ss_dssp EEECCTTEEEEEEEEC---CCEEEEEEEECSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESS---SEEEEEEC
T ss_pred EEecccCeEEEEEEEecCCCcEEEEEEEEChhc---CHHHHHHHHHHHHHHHhCCCCCEeeEeeeeccC---eEEEEEEe
Confidence 4999999999999875 34579999985322 233457899999999999999999999999764 47999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
+++|+|.+++... ...++|.++.+|+.|||+||+|||+. +|+||||||+|||+++++.+||+|||+|+.+..
T Consensus 90 ~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~ylH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~ 161 (285)
T d1u59a_ 90 AGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGA 161 (285)
T ss_dssp CTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred CCCCcHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCcCchhheeeccCCceeeccchhhhcccc
Confidence 9999999998533 34699999999999999999999998 999999999999999999999999999987653
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=3e-31 Score=257.69 Aligned_cols=142 Identities=15% Similarity=0.214 Sum_probs=127.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +|+.||||++..... ...+.+.+|++++++++|||||++++++.+.+ ..++||||+
T Consensus 26 ~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~----~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~--~~~ivmEy~ 99 (293)
T d1yhwa1 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ----PKKELIINEILVMRENKNPNIVNYLDSYLVGD--ELWVVMEYL 99 (293)
T ss_dssp EECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGC----SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred EEEecCcCcEEEEEEECCCCCEEEEEEEecccC----hHHHHHHHHHHHHHhCCCCCEeeEeEEEEECC--EEEEEEEec
Confidence 78999999999999985 789999999854322 22457899999999999999999999999877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++..+ .+++.++..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+.+.+
T Consensus 100 ~gg~L~~~~~~~---~l~~~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~ 168 (293)
T d1yhwa1 100 AGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168 (293)
T ss_dssp TTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred CCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCcHHHeEECCCCcEeeccchhheeecc
Confidence 999999988643 489999999999999999999999 999999999999999999999999999987653
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.9e-31 Score=257.36 Aligned_cols=144 Identities=24% Similarity=0.286 Sum_probs=124.3
Q ss_pred chhCcCCCeeEEEEEeCC---CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEe
Q 009965 364 NIIGSSPDSLVYKGTMKG---GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~---~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
+.||+|+||+||+|.+++ ++.||||++.... .+....++|.+|++++++++|||||+++|+|.++ ..+||||
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~---~~~lvmE 87 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA--NDPALKDELLAEANVMQQLDNPYIVRMIGICEAE---SWMLVME 87 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-------CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESS---SEEEEEE
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhh--CCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccC---CEEEEEE
Confidence 469999999999998753 4579999985432 2234457899999999999999999999999754 4789999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
|+++|+|.++++... .++|.++.+|+.|||+||+|||+. +|+||||||+|||++.++.+||+|||+|+.+..
T Consensus 88 ~~~~g~L~~~l~~~~--~l~~~~~~~i~~qi~~gl~ylH~~---~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~ 159 (277)
T d1xbba_ 88 MAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 159 (277)
T ss_dssp CCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred cCCCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHhhHHhC---CcccCCCcchhhcccccCcccccchhhhhhccc
Confidence 999999999997543 599999999999999999999998 999999999999999999999999999987643
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=7.4e-32 Score=266.29 Aligned_cols=149 Identities=17% Similarity=0.226 Sum_probs=131.1
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceE
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
++|. +.||+|+||+||+|+.. +|+.||+|++.... .....+++.+|+.++++++|||||+++++|.+.+ ..+
T Consensus 6 d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~---~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~--~~~ 80 (322)
T d1s9ja_ 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG--EIS 80 (322)
T ss_dssp GGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCC---CTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSS--EEE
T ss_pred cCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhh---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEE
Confidence 4565 78999999999999986 68899999985432 2234567999999999999999999999999877 899
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+||||+++|+|.+++.+.. .+++..+..++.|+++||+|||+.+ +|+||||||+|||+++++.+||+|||+|+.+.
T Consensus 81 iVmEy~~gg~L~~~l~~~~--~l~~~~~~~~~~qil~aL~yLH~~~--~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~ 156 (322)
T d1s9ja_ 81 ICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 156 (322)
T ss_dssp EEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHH
T ss_pred EEEEcCCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHhC--CEEccccCHHHeeECCCCCEEEeeCCCccccC
Confidence 9999999999999997443 4899999999999999999999731 79999999999999999999999999999765
Q ss_pred c
Q 009965 517 S 517 (521)
Q Consensus 517 ~ 517 (521)
+
T Consensus 157 ~ 157 (322)
T d1s9ja_ 157 D 157 (322)
T ss_dssp H
T ss_pred C
Confidence 4
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=8e-32 Score=260.79 Aligned_cols=143 Identities=20% Similarity=0.296 Sum_probs=125.1
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||+||+|+++++..||||++.... ...++|.+|+.++++++|||||+++|+|.++ ..++||||++
T Consensus 23 ~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-----~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~---~~~lv~Ey~~ 94 (285)
T d1fmka3 23 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE---PIYIVTEYMS 94 (285)
T ss_dssp EEEEECSSCEEEEEEETTTEEEEEEECCTTS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECSS---SCEEEECCCT
T ss_pred eEEeeCCCeEEEEEEECCCCEEEEEEECccc-----CCHHHHHHHHHHHHhcccCCEeEEEEEEecC---CeEEEEEecC
Confidence 7899999999999999988889999984322 1245799999999999999999999999654 5799999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
+|+|.+++.......++|.++++|+.|||+||+|||+. +|+||||||+|||+|+++++||+|||+|+.+.+
T Consensus 95 ~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~---~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~ 165 (285)
T d1fmka3 95 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 165 (285)
T ss_dssp TCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred CCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhh---heecccccceEEEECCCCcEEEcccchhhhccC
Confidence 99999998754445699999999999999999999999 999999999999999999999999999987653
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=3.4e-31 Score=254.44 Aligned_cols=151 Identities=25% Similarity=0.264 Sum_probs=127.4
Q ss_pred hhchhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecC--CCCceEEE
Q 009965 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES--SPFTRMLV 438 (521)
Q Consensus 362 ~~~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~~~lv 438 (521)
|.+.||+|+||+||+|+.. ++..||+|++..+.. .....+.|.+|++++++++|||||++++++.+. +....++|
T Consensus 13 ~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~--~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~iv 90 (270)
T d1t4ha_ 13 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL--TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 90 (270)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEE
Confidence 3467999999999999986 688999999854432 234456799999999999999999999998652 22257999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeec-CCCCeeeCCCchhhhccc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT-EDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld-~~~~~kl~DfGla~~~~~ 517 (521)
|||+++|+|.+++.... .+++.++..|+.||++||+|||+. .++|+||||||+|||++ +++.+||+|||+|+....
T Consensus 91 mE~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~gl~yLH~~-~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~ 167 (270)
T d1t4ha_ 91 TELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 167 (270)
T ss_dssp EECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred EeCCCCCcHHHHHhccc--cccHHHHHHHHHHHHHHHHHHHHC-CCCEEeCCcChhhceeeCCCCCEEEeecCcceeccC
Confidence 99999999999996443 589999999999999999999997 23499999999999996 578999999999987654
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2.6e-31 Score=257.72 Aligned_cols=143 Identities=18% Similarity=0.150 Sum_probs=127.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. ++..||||++..... ...++|.+|++++++++|||||++++++.+.+ ..++||||+
T Consensus 18 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~----~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~~~lvmEy~ 91 (288)
T d2jfla1 18 GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSE----EELEDYMVEIDILASCDHPNIVKLLDAFYYEN--NLWILIEFC 91 (288)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECSSS----GGGGGTHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred EEEeeCCCcEEEEEEECCCCeEEEEEEECcCCH----HHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC--eEEEEEecC
Confidence 68999999999999986 689999999854322 23456899999999999999999999999877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++... ..++++.++..|+.|+++||+|||+. +|+||||||+|||++.++.+||+|||+|+.+.
T Consensus 92 ~~g~L~~~~~~~-~~~l~e~~~~~i~~qi~~gL~ylH~~---~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~ 161 (288)
T d2jfla1 92 AGGAVDAVMLEL-ERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNT 161 (288)
T ss_dssp TTEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECH
T ss_pred CCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEEEeecChhheeECCCCCEEEEechhhhccC
Confidence 999999998643 23599999999999999999999999 99999999999999999999999999997654
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.97 E-value=4.9e-31 Score=258.25 Aligned_cols=146 Identities=17% Similarity=0.159 Sum_probs=128.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +++.||||++..... ......+.|.+|++++++++|||||++++++.+.+ ..++||||+
T Consensus 21 ~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~--~~~iv~E~~ 97 (309)
T d1u5ra_ 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH--TAWLVMEYC 97 (309)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEECCSS-CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEchhhc-cCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECC--EEEEEEEec
Confidence 78999999999999986 788999999854332 22334567999999999999999999999998877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++|++..++..+ .++++.++..|+.||+.||.|||+. +|+||||||+|||+++++.+||+|||+|+....
T Consensus 98 ~~g~l~~~~~~~--~~l~e~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~ 167 (309)
T d1u5ra_ 98 LGSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 167 (309)
T ss_dssp SEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred CCCchHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEECCCCCEEEeecccccccCC
Confidence 999998776533 3599999999999999999999999 999999999999999999999999999987654
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=5.3e-31 Score=255.36 Aligned_cols=145 Identities=26% Similarity=0.375 Sum_probs=122.5
Q ss_pred chhCcCCCeeEEEEEeCCC-----CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEE
Q 009965 364 NIIGSSPDSLVYKGTMKGG-----PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~-----~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
++||+|+||+||+|++++. ..||||++... .......+|.+|++++.+++|||||+++|+|.+.+ ..++|
T Consensus 13 ~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~--~~~~v 87 (283)
T d1mqba_ 13 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG---YTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK--PMMII 87 (283)
T ss_dssp EEEEECSSSEEEEEEEEC---CCEEEEEEEEECTT---CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SEEEE
T ss_pred eEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcc---cChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCC--ceEEE
Confidence 7899999999999998642 36999988432 22334567999999999999999999999998877 78999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
|||+.+|++.+++.... ..++|.++.+|+.|||.||+|||+. +|+||||||+|||+|.++.+||+|||+|+.+.+
T Consensus 88 ~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~i~~gl~~lH~~---~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~ 162 (283)
T d1mqba_ 88 TEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 162 (283)
T ss_dssp EECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred EEecccCcchhhhhccc-ccccHHHHHHHHHHHHHhhhhcccc---ccccCccccceEEECCCCeEEEcccchhhcccC
Confidence 99999999999886433 4699999999999999999999998 999999999999999999999999999998654
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=5.4e-31 Score=255.33 Aligned_cols=145 Identities=21% Similarity=0.201 Sum_probs=128.9
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +|+.||||++..... ......+.+.+|++++++++|||||++++++.+.+ ..|+||||+
T Consensus 14 ~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~~~ivmEy~ 90 (288)
T d1uu3a_ 14 KILGEGSFSTVVLARELATSREYAIKILEKRHI-IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE--KLYFGLSYA 90 (288)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEehHHc-cCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECC--EEEEEEEcc
Confidence 78999999999999986 789999999854321 12233467999999999999999999999999877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+|+.+.
T Consensus 91 ~gg~L~~~~~~~~--~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~ 159 (288)
T d1uu3a_ 91 KNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS 159 (288)
T ss_dssp TTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred CCCCHHHhhhccC--CCCHHHHHHHHHHHHHHHHhhccc---cEEcCcCCccccccCCCceEEecccccceecc
Confidence 9999999986443 489999999999999999999999 99999999999999999999999999998764
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.9e-30 Score=256.46 Aligned_cols=147 Identities=22% Similarity=0.322 Sum_probs=124.0
Q ss_pred hchhCcCCCeeEEEEEeCC-C-----CEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCce
Q 009965 363 SNIIGSSPDSLVYKGTMKG-G-----PEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~~-~-----~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 435 (521)
.+.||+|+||+||+|++.. + ..||||.+..... ....+.|.+|+.++.++ +|||||+++|+|.+.+ ..
T Consensus 42 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~--~~ 116 (325)
T d1rjba_ 42 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD---SSEREALMSELKMMTQLGSHENIVNLLGACTLSG--PI 116 (325)
T ss_dssp EEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC---------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SC
T ss_pred eeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccC---HHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCC--eE
Confidence 3899999999999998753 2 2588888743321 23346799999999998 8999999999999877 78
Q ss_pred EEEEecCCCCChhhhhccCC---------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCC
Q 009965 436 MLVFDYASNGTLYEHLHYGE---------------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSS 494 (521)
Q Consensus 436 ~lv~ey~~~gsL~~~l~~~~---------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~ 494 (521)
++||||+++|+|.++++.+. ...++|..+..|+.||++||+|||+. +||||||||+
T Consensus 117 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~---~IiHRDlKp~ 193 (325)
T d1rjba_ 117 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAAR 193 (325)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSGG
T ss_pred EEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCchh
Confidence 99999999999999997432 13589999999999999999999998 9999999999
Q ss_pred CeeecCCCCeeeCCCchhhhccc
Q 009965 495 AVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 495 NiLld~~~~~kl~DfGla~~~~~ 517 (521)
|||++.++.+||+|||+|+....
T Consensus 194 Nill~~~~~~Kl~DFGla~~~~~ 216 (325)
T d1rjba_ 194 NVLVTHGKVVKICDFGLARDIMS 216 (325)
T ss_dssp GEEEETTTEEEECCCGGGSCGGG
T ss_pred ccccccCCeEEEeeccccccccC
Confidence 99999999999999999987654
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=3.2e-30 Score=252.84 Aligned_cols=149 Identities=24% Similarity=0.317 Sum_probs=127.1
Q ss_pred hhhchhCcCCCeeEEEEEeCCC----CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceE
Q 009965 361 DFSNIIGSSPDSLVYKGTMKGG----PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 361 ~~~~~ig~G~~g~Vy~~~~~~~----~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
+|+++||+|+||+||+|++.++ ..||||++... ......++|.+|++++++++|||||+++|+|...+. ..+
T Consensus 30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~-~~~ 105 (311)
T d1r0pa_ 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPL 105 (311)
T ss_dssp EEEEEEEEETTEEEEEEEECC----CEEEEEEEECCC---CCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTT-EEE
T ss_pred ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcc---cCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCC-ceE
Confidence 3457899999999999998642 25899988422 233445789999999999999999999999875432 689
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+||||+++|+|.++++.. ...++|..+++++.|+|+||.|+|+. +|+||||||+|||+|+++.+||+|||+++.+.
T Consensus 106 lv~E~~~~g~l~~~~~~~-~~~~~~~~~~~i~~qia~gL~~lH~~---~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~ 181 (311)
T d1r0pa_ 106 VVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMY 181 (311)
T ss_dssp EEEECCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSSGGGCCTT
T ss_pred EEEEEeecCchhhhhccc-cccchHHHHHHHHHHHHHhhhhhccc---CcccCCccHHhEeECCCCCEEEecccchhhcc
Confidence 999999999999998743 34578999999999999999999998 99999999999999999999999999999765
Q ss_pred c
Q 009965 517 S 517 (521)
Q Consensus 517 ~ 517 (521)
.
T Consensus 182 ~ 182 (311)
T d1r0pa_ 182 D 182 (311)
T ss_dssp T
T ss_pred c
Confidence 3
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.96 E-value=3.2e-30 Score=248.52 Aligned_cols=147 Identities=22% Similarity=0.232 Sum_probs=129.9
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeecccc-----chhhHHHHHHHHHHHhccC-CCCccceeeEEecCCCCceE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW-----TGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-----~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~ 436 (521)
+.||+|+||+||+|+.. +|+.||||++....... .....+.+.+|+.++++++ |||||++++++.+++ ..|
T Consensus 9 ~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~--~~~ 86 (277)
T d1phka_ 9 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT--FFF 86 (277)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--EEE
T ss_pred eEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccCc--ceE
Confidence 78999999999999985 78899999986543211 1223457899999999997 999999999999877 899
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+||||+++|+|.++++.+. ++++.++..++.||++||+|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 87 ivmE~~~~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~ 161 (277)
T d1phka_ 87 LVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLD 161 (277)
T ss_dssp EEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEcCCCchHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHc---CCcccccccceEEEcCCCCeEEccchheeEcc
Confidence 9999999999999997443 599999999999999999999999 99999999999999999999999999999876
Q ss_pred c
Q 009965 517 S 517 (521)
Q Consensus 517 ~ 517 (521)
+
T Consensus 162 ~ 162 (277)
T d1phka_ 162 P 162 (277)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=3.5e-30 Score=253.08 Aligned_cols=147 Identities=14% Similarity=0.150 Sum_probs=129.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.+ +|+.||||++..... ......+.+.+|+.++++++|||||++++++.+.+ ..++||||+
T Consensus 10 ~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~--~~~ivmE~~ 86 (316)
T d1fota_ 10 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIV-VRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ--QIFMIMDYI 86 (316)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEecCcCcEEEEEEECCCCCEEEEEEEchHHc-cCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCC--eeeeEeeec
Confidence 78999999999999986 689999999854321 12233567999999999999999999999999877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~~ 518 (521)
++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+|+.+...
T Consensus 87 ~gg~l~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~ 157 (316)
T d1fota_ 87 EGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV 157 (316)
T ss_dssp CSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSC
T ss_pred CCccccccccccc--cccccHHHHHHHHHHHhhhhhccC---cEEccccCchheeEcCCCCEEEecCccceEeccc
Confidence 9999999986544 478899999999999999999999 9999999999999999999999999999987543
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.96 E-value=1.4e-30 Score=254.64 Aligned_cols=152 Identities=25% Similarity=0.327 Sum_probs=130.7
Q ss_pred HHhhhh--chhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEec
Q 009965 358 ACEDFS--NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRE 429 (521)
Q Consensus 358 ~~~~~~--~~ig~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~ 429 (521)
..++|. +.||+|+||+||+|+++ +++.||||++.... .....++|.+|+.++++++||||++++++|.+
T Consensus 11 p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~ 87 (301)
T d1lufa_ 11 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA---SADMQADFQREAALMAEFDNPNIVKLLGVCAV 87 (301)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred CHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhc---ChHHHHHHHHHHHHHHhcCCCCcccceeeecc
Confidence 345565 88999999999999874 34689999984322 23446789999999999999999999999988
Q ss_pred CCCCceEEEEecCCCCChhhhhccCC----------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeE
Q 009965 430 SSPFTRMLVFDYASNGTLYEHLHYGE----------------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFT 487 (521)
Q Consensus 430 ~~~~~~~lv~ey~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iv 487 (521)
.+ ..++||||+++|+|.++++... ...++|.++++|+.|+|.||+|||+. +||
T Consensus 88 ~~--~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~---~iv 162 (301)
T d1lufa_ 88 GK--PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFV 162 (301)
T ss_dssp SS--SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCC
T ss_pred CC--ceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccC---CeE
Confidence 76 7899999999999999986321 23489999999999999999999998 999
Q ss_pred ecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 488 ISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 488 H~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
||||||+|||+|.++.+||+|||+|+.+.+
T Consensus 163 HrDlKp~NILld~~~~~Kl~DFGls~~~~~ 192 (301)
T d1lufa_ 163 HRDLATRNCLVGENMVVKIADFGLSRNIYS 192 (301)
T ss_dssp CSCCSGGGEEECGGGCEEECCCSCHHHHTG
T ss_pred eeEEcccceEECCCCcEEEccchhheeccC
Confidence 999999999999999999999999997644
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=5.5e-30 Score=249.45 Aligned_cols=147 Identities=20% Similarity=0.251 Sum_probs=129.3
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccc--cchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEe
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH--WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 440 (521)
+.||+|+||+||+|+.. +|+.||||++...... ......+.|.+|+.++++++|||||++++++.+.+ ..++|||
T Consensus 16 ~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~--~~~iv~E 93 (293)
T d1jksa_ 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--DVILILE 93 (293)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEEE
Confidence 78999999999999986 7899999998654321 12224578999999999999999999999999887 8999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCC----CeeeCCCchhhhcc
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF----SPKVSPLCLSFLLV 516 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~----~~kl~DfGla~~~~ 516 (521)
|+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+|++|||+|+.+.
T Consensus 94 ~~~gg~L~~~i~~~~--~l~~~~~~~~~~qi~~al~yLH~~---~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~ 168 (293)
T d1jksa_ 94 LVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 168 (293)
T ss_dssp CCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECT
T ss_pred cCCCccccchhcccc--ccchhHHHHHHHHHHHHHHhhhhc---ceeecccccceEEEecCCCcccceEecchhhhhhcC
Confidence 999999999996543 599999999999999999999999 999999999999998776 49999999998765
Q ss_pred c
Q 009965 517 S 517 (521)
Q Consensus 517 ~ 517 (521)
.
T Consensus 169 ~ 169 (293)
T d1jksa_ 169 F 169 (293)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.96 E-value=3.8e-30 Score=251.78 Aligned_cols=144 Identities=19% Similarity=0.212 Sum_probs=117.3
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +++.||||.+...... ...+.+.+|++++++++|||||++++++.+.+ ..|+||||+
T Consensus 15 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~---~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~--~~~lvmE~~ 89 (307)
T d1a06a_ 15 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALE---GKEGSMENEIAVLHKIKHPNIVALDDIYESGG--HLYLIMQLV 89 (307)
T ss_dssp EESBSGGGGGEEEEEETTTCCEEEEEEEEC-------------CHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEeeccCeEEEEEEECCCCCEEEEEEEchHHhh---hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEEecc
Confidence 78999999999999986 6899999998644322 22356889999999999999999999999877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeec---CCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT---EDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld---~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.... .+++.++..|+.|++.||+|||+. +|+||||||+|||++ +++.+||+|||+|+...+
T Consensus 90 ~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~ 162 (307)
T d1a06a_ 90 SGGELFDRIVEKG--FYTERDASRLIFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP 162 (307)
T ss_dssp CSCBHHHHHHTCS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCC--------
T ss_pred CCCcHHHhhhccc--CCCHHHHHHHHHHHHHHHHhhhhc---eeeeEEecccceeecccCCCceEEEeccceeEEccC
Confidence 9999999997543 599999999999999999999999 999999999999994 578999999999987654
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=99.96 E-value=8.4e-30 Score=253.84 Aligned_cols=144 Identities=15% Similarity=0.196 Sum_probs=127.7
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++.+.+ ..|+||||+
T Consensus 35 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~----~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~--~~~ivmE~~ 108 (352)
T d1koba_ 35 EELGSGAFGVVHRCVEKATGRVFVAKFINTPY----PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKY--EMVLILEFL 108 (352)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSS--EEEEEEECC
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEECCcc----hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEEEcC
Confidence 78999999999999986 79999999985432 123457889999999999999999999999877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeec--CCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT--EDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld--~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++... ..++++.+...|+.||+.||+|||+. +|+||||||+|||++ +++.+||+|||+|+.+.+
T Consensus 109 ~gg~L~~~~~~~-~~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~ 181 (352)
T d1koba_ 109 SGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 181 (352)
T ss_dssp CCCBHHHHTTCT-TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred CCChHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccccccccccccCCCeEEEeecccceecCC
Confidence 999999987533 34599999999999999999999999 999999999999998 678999999999988754
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=99.96 E-value=6.9e-30 Score=254.29 Aligned_cols=144 Identities=15% Similarity=0.238 Sum_probs=127.6
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|+.++++++|||||++++++.+.+ ..++|||||
T Consensus 32 ~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~----~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~--~~~ivmE~~ 105 (350)
T d1koaa2 32 EELGTGAFGVVHRVTERATGNNFAAKFVMTPH----ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN--EMVMIYEFM 105 (350)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEECCCS----HHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETT--EEEEEECCC
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEcccc----hhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEEEcC
Confidence 78999999999999986 78999999985432 223567899999999999999999999999877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeec--CCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT--EDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld--~~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++... ...+++..+..|+.||+.||+|||+. +||||||||+|||++ .++.+||+|||+|+.+.+
T Consensus 106 ~gg~L~~~l~~~-~~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~ 178 (350)
T d1koaa2 106 SGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 178 (350)
T ss_dssp CSCBHHHHHTCT-TSCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTSCCEEECCCTTCEECCT
T ss_pred CCCCHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhc---CCeeeeechhHeeeccCCCCeEEEeecchheeccc
Confidence 999999999633 33599999999999999999999999 999999999999995 467899999999987654
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=4.8e-30 Score=253.91 Aligned_cols=149 Identities=19% Similarity=0.144 Sum_probs=130.8
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceE
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 436 (521)
++|. +.||+|+||+||+|+.. +|+.||||++...... .....+.+.+|+.++++++|||||++++++.+.+ ..|
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~-~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~--~~~ 81 (337)
T d1o6la_ 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVII-AKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD--RLC 81 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSS--EEE
T ss_pred HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhcc-CHHHHHHHHHHHHHHHhCCCCCEEEEEeeecccc--ccc
Confidence 3454 78999999999999986 7899999998543211 1223567899999999999999999999999887 899
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+||||+++|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||+|+++.+||+|||+|+...
T Consensus 82 iv~ey~~gg~L~~~~~~~~--~~~e~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~ 156 (337)
T d1o6la_ 82 FVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156 (337)
T ss_dssp EEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred cceeccCCCchhhhhhccc--CCcHHHHHHHHHHHhhhhhhhhhc---CccccccCHHHeEecCCCCEEEeecccccccc
Confidence 9999999999999997544 489999999999999999999999 99999999999999999999999999998754
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.3e-30 Score=249.17 Aligned_cols=144 Identities=24% Similarity=0.310 Sum_probs=120.8
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||.||+|+++ |..||||++... ...++|.+|++++++++|||||+++|+|.+.+. ..++||||++
T Consensus 13 ~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~------~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~-~~~lv~ey~~ 84 (262)
T d1byga_ 13 QTIGKGEFGDVMLGDYR-GNKVAVKCIKND------ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMA 84 (262)
T ss_dssp EEEEECSSCEEEEEEET-TEEEEEEECCCC------C--HHHHHTHHHHTTCCCTTBCCEEEEECCC---CCEEEECCCT
T ss_pred EEEecCCCeEEEEEEEC-CeEEEEEEECcH------HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCC-cEEEEEeccC
Confidence 78999999999999985 678999998432 234579999999999999999999999965432 5799999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcccc
Q 009965 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~~ 518 (521)
+|+|.++++.+....++|..+++|+.|||.||+|||+. +|+||||||+|||++.++.+||+|||+++...+.
T Consensus 85 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~ 156 (262)
T d1byga_ 85 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 156 (262)
T ss_dssp TEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-------
T ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccC---ceeccccchHhheecCCCCEeecccccceecCCC
Confidence 99999999754444689999999999999999999998 9999999999999999999999999999976543
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.96 E-value=2e-29 Score=250.98 Aligned_cols=150 Identities=17% Similarity=0.134 Sum_probs=131.3
Q ss_pred hhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEE
Q 009965 361 DFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 361 ~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
+|. +.||+|+||+||+|+.+ +|+.||||++..... ......+.+.+|+.+++.++|||||++++++.+.. ..++
T Consensus 42 ~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~~ 118 (350)
T d1rdqe_ 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYM 118 (350)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEE
T ss_pred CeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHc-cCHHHHHHHHHHHHHHHHcCCCcEeeccccccccc--cccc
Confidence 454 78999999999999986 789999999854321 12233467899999999999999999999999877 8899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 438 v~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
||||+.+|+|.+++.... .+++.....|+.||+.||.|||+. +||||||||+|||++.++.+||+|||+|+.+..
T Consensus 119 v~e~~~~g~l~~~l~~~~--~l~e~~~~~i~~qi~~aL~yLH~~---~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~ 193 (350)
T d1rdqe_ 119 VMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp EEECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred ccccccccchhhhHhhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEecCcCCHHHcccCCCCCEEeeeceeeeeccc
Confidence 999999999999996543 489999999999999999999999 999999999999999999999999999998764
Q ss_pred c
Q 009965 518 S 518 (521)
Q Consensus 518 ~ 518 (521)
.
T Consensus 194 ~ 194 (350)
T d1rdqe_ 194 R 194 (350)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.1e-29 Score=248.22 Aligned_cols=147 Identities=20% Similarity=0.193 Sum_probs=123.2
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccc-cchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH-WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~-~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
++||+|+||+||+|+.. +|+.||||++...... ......+.+.+|+.++++++|||||++++++.+.+ ..++||||
T Consensus 4 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~--~~~ivmE~ 81 (299)
T d1ua2a_ 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS--NISLVFDF 81 (299)
T ss_dssp EEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT--CCEEEEEC
T ss_pred eEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCC--ceeehhhh
Confidence 57999999999999986 6899999998544322 11223456899999999999999999999999877 79999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
+++|++..+.. ....+++.++..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+|+.+..
T Consensus 82 ~~~~~~~~~~~--~~~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~ 152 (299)
T d1ua2a_ 82 METDLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGS 152 (299)
T ss_dssp CSEEHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTS
T ss_pred hcchHHhhhhh--cccCCCHHHHHHHHHHHHHHHHHhhcc---ceecccCCcceEEecCCCccccccCccccccCC
Confidence 99887776654 234588999999999999999999999 999999999999999999999999999987654
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=9.2e-30 Score=244.98 Aligned_cols=146 Identities=21% Similarity=0.242 Sum_probs=118.3
Q ss_pred chhCcCCCeeEEEEEeC--CC--CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMK--GG--PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~--~~--~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||+||+|++. ++ ..||||++..... ......++|.+|++++++++|||||+++|+|.+. ..++||
T Consensus 14 ~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~-~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~---~~~lv~ 89 (273)
T d1u46a_ 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVL-SQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP---PMKMVT 89 (273)
T ss_dssp EECC----CCCEEEEEECTTSCEEEEEEEC---------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS---SCEEEE
T ss_pred EEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhc-CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeec---chheee
Confidence 78999999999999874 23 3689998754322 2234456899999999999999999999999764 478999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
||+++|++.+++..+. ..++|..+.+++.|+|+||.|||+. +|+||||||+|||++.++.+||+|||+++.+..
T Consensus 90 e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~ 163 (273)
T d1u46a_ 90 ELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 163 (273)
T ss_dssp ECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred eeecCcchhhhhhccc-CCCCHHHHHHHHHHHHHHHHHhhhC---CEeeeeecHHHhccccccceeeccchhhhhccc
Confidence 9999999999886433 3599999999999999999999998 999999999999999999999999999997643
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.7e-29 Score=248.72 Aligned_cols=144 Identities=22% Similarity=0.293 Sum_probs=122.5
Q ss_pred chhCcCCCeeEEEEEeC-CCC----EEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGP----EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~----~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 438 (521)
++||+|+||+||+|++. +|+ .||+|++... ......++|.+|++++++++|||||+++|+|.+. ..+++
T Consensus 15 ~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~---~~~~v 88 (317)
T d1xkka_ 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLI 88 (317)
T ss_dssp EEEEECSSEEEEEEEECC----CCEEEEEEEECC-------CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS---SEEEE
T ss_pred eEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccc---cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---CeeEE
Confidence 79999999999999886 454 4777776422 2233467899999999999999999999999875 47899
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
+||+.+|+|.+++... ...++|..+.+|+.|||+||+|||+. +|+||||||+|||++.++.+||+|||+|+.+..
T Consensus 89 ~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~gl~yLH~~---~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~ 163 (317)
T d1xkka_ 89 TQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 163 (317)
T ss_dssp EECCTTCBHHHHHHHT-SSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCCSHHHHTTT
T ss_pred EEeccCCccccccccc-ccCCCHHHHHHHHHHHHHHHHHHHHc---CcccCcchhhcceeCCCCCeEeeccccceeccc
Confidence 9999999999988644 34699999999999999999999998 999999999999999999999999999998653
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=3.1e-29 Score=246.92 Aligned_cols=143 Identities=12% Similarity=0.165 Sum_probs=126.2
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +++.||||.+..+. .....+.+|+++|..++|||||++++++.+.+ ..|+||||+
T Consensus 11 ~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-----~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~--~~~lvmE~~ 83 (321)
T d1tkia_ 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-----TDQVLVKKEISILNIARHRNILHLHESFESME--ELVMIFEFI 83 (321)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCCT-----HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETT--EEEEEECCC
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-----ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--EEEEEEecC
Confidence 78999999999999986 68899999985432 22356889999999999999999999999877 899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC--CCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE--DFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~--~~~~kl~DfGla~~~~~ 517 (521)
++|+|.+++.... ..+++.++..|+.||++||+|||+. +|+||||||+|||++. ...+||+|||+++....
T Consensus 84 ~gg~L~~~i~~~~-~~l~e~~~~~i~~qi~~al~yLH~~---~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~ 156 (321)
T d1tkia_ 84 SGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP 156 (321)
T ss_dssp CCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred CCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHc---CCCcccccccceeecCCCceEEEEcccchhhcccc
Confidence 9999999996433 3589999999999999999999999 9999999999999985 45899999999987653
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.96 E-value=2.4e-29 Score=251.78 Aligned_cols=146 Identities=18% Similarity=0.085 Sum_probs=124.5
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHH---HHHHHhccCCCCccceeeEEecCCCCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQR---EVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~---E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
++||+|+||.||+|+.. +|+.||||++...... .......+.+ |+.+++.++|||||++++++.+.+ ..|+||
T Consensus 10 ~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~-~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~--~~~ivm 86 (364)
T d1omwa3 10 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK-MKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD--KLSFIL 86 (364)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH-HHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS--EEEEEE
T ss_pred eEEecCCCeEEEEEEECCCCCEEEEEEEchHHcc-hhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECC--EEEEEE
Confidence 78999999999999986 6899999998543211 1112233444 467778889999999999999877 899999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
||+++|+|.+++.... .+++..+..|+.||+.||+|||+. +|+||||||+|||+++++.+||+|||+|+.+..
T Consensus 87 E~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~ylH~~---~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~ 159 (364)
T d1omwa3 87 DLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSK 159 (364)
T ss_dssp CCCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSSSCEEECCCTTCEECSS
T ss_pred EecCCCcHHHHHHhcc--cccHHHHHHHHHHHHHHHHHHHHC---CccceeeccceeEEcCCCcEEEeeeceeeecCC
Confidence 9999999999996443 488999999999999999999999 999999999999999999999999999997654
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=3.8e-29 Score=245.15 Aligned_cols=146 Identities=18% Similarity=0.304 Sum_probs=127.2
Q ss_pred chhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEE
Q 009965 364 NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
+.||+|+||+||+|++. ++..||||++... ........|.+|+.++++++|||||+++|+|.... ..++
T Consensus 26 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~---~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~--~~~l 100 (308)
T d1p4oa_ 26 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA---ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ--PTLV 100 (308)
T ss_dssp EEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT---SCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS--SCEE
T ss_pred eEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcc---cChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCC--ceeE
Confidence 78999999999999874 2568999998422 22334567999999999999999999999998776 7899
Q ss_pred EEecCCCCChhhhhccC--------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCC
Q 009965 438 VFDYASNGTLYEHLHYG--------ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPL 509 (521)
Q Consensus 438 v~ey~~~gsL~~~l~~~--------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~Df 509 (521)
||||+++|+|.++++.. ....++|..+.+|+.|+|+||.|||+. +|+||||||+|||+|+++++||+||
T Consensus 101 v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~---~ivHrDlk~~NiLld~~~~~Kl~DF 177 (308)
T d1p4oa_ 101 IMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDF 177 (308)
T ss_dssp EEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEECCT
T ss_pred EEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeeceEcCCceeecCCceEEEeec
Confidence 99999999999998631 224579999999999999999999998 9999999999999999999999999
Q ss_pred chhhhccc
Q 009965 510 CLSFLLVS 517 (521)
Q Consensus 510 Gla~~~~~ 517 (521)
|+|+.+..
T Consensus 178 Gla~~~~~ 185 (308)
T d1p4oa_ 178 GMTRDIYE 185 (308)
T ss_dssp TCCCGGGG
T ss_pred ccceeccC
Confidence 99997754
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=3e-29 Score=246.08 Aligned_cols=146 Identities=23% Similarity=0.365 Sum_probs=124.3
Q ss_pred chhCcCCCeeEEEEEeC-CCC--EEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGP--EIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~--~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
++||+|+||+||+|+++ ++. .||||++.... .....++|.+|++++.++ +|||||+++|+|.+.+ ..++||
T Consensus 16 ~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~--~~~iV~ 90 (309)
T d1fvra_ 16 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA---SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG--YLYLAI 90 (309)
T ss_dssp EEEECGGGCEEEEEEEEETTEEEEEEEEEEECC---------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred EEEeeCCCcEEEEEEECCCCeEEEEEEEEECccc---ChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCC--eeEEEE
Confidence 78999999999999987 444 46777763221 122345799999999999 7999999999999877 899999
Q ss_pred ecCCCCChhhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCee
Q 009965 440 DYASNGTLYEHLHYG--------------ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPK 505 (521)
Q Consensus 440 ey~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~k 505 (521)
||+++|+|.++++.. ....++|..+.+++.|||+||.|+|+. +|+||||||+|||+++++.+|
T Consensus 91 ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~---~iiHrDlkp~NIL~~~~~~~k 167 (309)
T d1fvra_ 91 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAK 167 (309)
T ss_dssp CCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEE
T ss_pred EecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC---CccccccccceEEEcCCCceE
Confidence 999999999999743 235699999999999999999999999 999999999999999999999
Q ss_pred eCCCchhhhccc
Q 009965 506 VSPLCLSFLLVS 517 (521)
Q Consensus 506 l~DfGla~~~~~ 517 (521)
|+|||+|+....
T Consensus 168 l~DfG~a~~~~~ 179 (309)
T d1fvra_ 168 IADFGLSRGQEV 179 (309)
T ss_dssp ECCTTCEESSCE
T ss_pred Eccccccccccc
Confidence 999999987553
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=2.8e-29 Score=245.41 Aligned_cols=145 Identities=23% Similarity=0.315 Sum_probs=119.6
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC--CceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP--FTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~--~~~~lv~ey 441 (521)
+.||+|+||+||+|++ +|+.||||++.... .....+..|+..+.+++|||||+++|+|.+.+. ...++||||
T Consensus 9 ~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~-----~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey 82 (303)
T d1vjya_ 9 ESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE-----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY 82 (303)
T ss_dssp EEEECCSSSEEEEEEE-TTEEEEEEEECGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred EEEeeCCCeEEEEEEE-CCEEEEEEEECccc-----hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEec
Confidence 7899999999999997 56899999884321 111223345555667899999999999976542 247899999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL-----GPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|++|+|.+++++. .++|.++.+++.|+|.||+|+|+.+ .++|+||||||+|||+|+++.+||+|||+++.+.
T Consensus 83 ~~~g~L~~~l~~~---~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~ 159 (303)
T d1vjya_ 83 HEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159 (303)
T ss_dssp CTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred ccCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCcccccc
Confidence 9999999999753 4899999999999999999999731 3499999999999999999999999999998765
Q ss_pred c
Q 009965 517 S 517 (521)
Q Consensus 517 ~ 517 (521)
.
T Consensus 160 ~ 160 (303)
T d1vjya_ 160 S 160 (303)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=4.9e-29 Score=243.33 Aligned_cols=149 Identities=20% Similarity=0.286 Sum_probs=126.3
Q ss_pred hhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEE
Q 009965 361 DFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (521)
Q Consensus 361 ~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 437 (521)
+|. +.||+|+||+||+|+.. +|+.||||++..... .....+++.+|++++++++|||||++++++.+.+ ..++
T Consensus 3 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~--~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~--~~~i 78 (298)
T d1gz8a_ 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE--TEGVPSTAIREISLLKELNHPNIVKLLDVIHTEN--KLYL 78 (298)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC---------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEE
T ss_pred CCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhc--ChHHHHHHHHHHHHHHhCCCCcEEEecccccccc--ceeE
Confidence 454 78999999999999985 789999999854321 1233467999999999999999999999999877 8999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 438 v~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
||||+.+ ++.+++.......+++..+..++.|++.||+|||+. +||||||||+|||++.++.+||+|||+|+....
T Consensus 79 v~e~~~~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~---~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~ 154 (298)
T d1gz8a_ 79 VFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 154 (298)
T ss_dssp EEECCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred EEeecCC-chhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcC---CEEccccCchheeecccCcceeccCCcceeccC
Confidence 9999976 555555444455699999999999999999999999 999999999999999999999999999987653
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=99.95 E-value=6.7e-29 Score=241.02 Aligned_cols=145 Identities=17% Similarity=0.191 Sum_probs=128.0
Q ss_pred chhCcCCCeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~~ 443 (521)
+.||+|+||+||+|+.++|+.||||++..... .....+++.+|+.++++++|||||++++++.+.+ ..++++||+.
T Consensus 8 ~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~i~~e~~~ 83 (286)
T d1ob3a_ 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKE--DEGIPSTTIREISILKELKHSNIVKLYDVIHTKK--RLVLVFEHLD 83 (286)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEEECCSSG--GGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSS--CEEEEEECCS
T ss_pred cEEecCCCcEEEEEEeCCCCEEEEEEEehhhc--ChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCC--ceeEEEEeeh
Confidence 78999999999999999999999999854322 2233567999999999999999999999999887 8999999998
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
++.+..+.... ..+++.++..|+.||+.||+|||+. +||||||||+|||++.++.+||+|||+|.....
T Consensus 84 ~~~~~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~ 152 (286)
T d1ob3a_ 84 QDLKKLLDVCE--GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGI 152 (286)
T ss_dssp EEHHHHHHTST--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC
T ss_pred hhhHHHHHhhc--CCcchhhhHHHHHHHHHHHHHhccC---cEEecCCCCceeeEcCCCCEEecccccceeccc
Confidence 87776665433 4599999999999999999999998 999999999999999999999999999988654
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=7e-29 Score=239.10 Aligned_cols=144 Identities=16% Similarity=0.233 Sum_probs=116.8
Q ss_pred chhCcCCCeeEEEEEeCC----CCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 439 (521)
+.||+|+||+||+|++.. +..||||.+... ......+.|.+|+.++++++|||||+++|++.+. ..++||
T Consensus 13 ~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~---~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~---~~~iv~ 86 (273)
T d1mp8a_ 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC---TSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN---PVWIIM 86 (273)
T ss_dssp EEEEECSSSEEEEEEECCC--CCEEEEEEECTTT---TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS---SCEEEE
T ss_pred EEEeeCCCcEEEEEEEecCCceeEEEEEEEeccc---cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---eEEEEE
Confidence 789999999999998853 235778776322 2234456799999999999999999999999653 589999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
||+++|+|.+++... ...+++.++..++.||++||+|||+. +|+||||||+||++++++.+||+|||+|+.+..
T Consensus 87 E~~~~g~l~~~~~~~-~~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~ 160 (273)
T d1mp8a_ 87 ELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 160 (273)
T ss_dssp ECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred EeccCCcHHhhhhcc-CCCCCHHHHHHHHHHHHHHhhhhccc---CeeccccchhheeecCCCcEEEccchhheeccC
Confidence 999999999987643 34689999999999999999999999 999999999999999999999999999997653
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=7.1e-29 Score=242.41 Aligned_cols=146 Identities=19% Similarity=0.235 Sum_probs=116.1
Q ss_pred chhCcCCCeeEEEEEeCC------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCceE
Q 009965 364 NIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 436 (521)
+.||+|+||+||+|++.. ++.||||++.... .....+.+.+|+.++.++ +|+|||.+++++...+. ..+
T Consensus 19 ~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~---~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~-~~~ 94 (299)
T d1ywna1 19 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG-PLM 94 (299)
T ss_dssp EEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC-------CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS-CCE
T ss_pred eEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEcccc---CcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCC-eEE
Confidence 889999999999998742 3579999984322 223456788888888887 78999999999876542 579
Q ss_pred EEEecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCC
Q 009965 437 LVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF 502 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~ 502 (521)
+||||+++|+|.++++... ...++|.++..|+.|||+||+|||+. +|+||||||+|||+++++
T Consensus 95 iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~ivHrDlKp~NILl~~~~ 171 (299)
T d1ywna1 95 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKN 171 (299)
T ss_dssp EEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGG
T ss_pred EEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC---CCcCCcCCccceeECCCC
Confidence 9999999999999996431 23589999999999999999999999 999999999999999999
Q ss_pred CeeeCCCchhhhcc
Q 009965 503 SPKVSPLCLSFLLV 516 (521)
Q Consensus 503 ~~kl~DfGla~~~~ 516 (521)
.+||+|||+|+...
T Consensus 172 ~~Kl~DFGla~~~~ 185 (299)
T d1ywna1 172 VVKICDFGLARDIY 185 (299)
T ss_dssp CEEECC------CC
T ss_pred cEEEccCcchhhcc
Confidence 99999999998754
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=9.6e-29 Score=243.15 Aligned_cols=145 Identities=16% Similarity=0.174 Sum_probs=125.4
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHh-ccCCCCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLA-RINHENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~-~l~H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||+||+|+.. +++.||||++...... .....+.+..|..++. .++|||||++++++.+.+ ..|+||||
T Consensus 8 ~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~-~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~--~~yivmEy 84 (320)
T d1xjda_ 8 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL-MDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE--NLFFVMEY 84 (320)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--EEEEEEEC
T ss_pred eEEecCCCcEEEEEEECCCCCEEEEEEEchhhcc-ChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCC--ceeEEEee
Confidence 88999999999999986 6899999998543211 1223345677777765 689999999999999887 89999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+++|+|.++++... .+++.++..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+|+...
T Consensus 85 ~~~g~L~~~i~~~~--~~~e~~~~~~~~qi~~al~ylH~~---~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~ 154 (320)
T d1xjda_ 85 LNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENM 154 (320)
T ss_dssp CTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred cCCCcHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCcccceeecCCCceeccccchhhhcc
Confidence 99999999997544 488999999999999999999999 99999999999999999999999999998654
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=1.6e-28 Score=241.05 Aligned_cols=147 Identities=18% Similarity=0.242 Sum_probs=127.4
Q ss_pred hchhCcCCCeeEEEEEeC------CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCce
Q 009965 363 SNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 435 (521)
.+.||+|+||.||+|++. +++.||||++.... ......+|.+|+.++.++ +|||||+++|+|.+.. ..
T Consensus 28 ~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~---~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~--~~ 102 (311)
T d1t46a_ 28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA---HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG--PT 102 (311)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SC
T ss_pred eeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECccc---CHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCC--EE
Confidence 378999999999999863 35689999985332 223456799999999999 7999999999998876 78
Q ss_pred EEEEecCCCCChhhhhccCC----------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeec
Q 009965 436 MLVFDYASNGTLYEHLHYGE----------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT 499 (521)
Q Consensus 436 ~lv~ey~~~gsL~~~l~~~~----------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld 499 (521)
++||||+++|+|.++++... ...+++..+.+|+.|||+||+|||++ +++||||||+|||++
T Consensus 103 ~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~---~ivHrDLKp~NIl~~ 179 (311)
T d1t46a_ 103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLT 179 (311)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEE
T ss_pred EEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---Ceeeccccccccccc
Confidence 99999999999999997432 23589999999999999999999999 999999999999999
Q ss_pred CCCCeeeCCCchhhhccc
Q 009965 500 EDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 500 ~~~~~kl~DfGla~~~~~ 517 (521)
.++.+|++|||+++....
T Consensus 180 ~~~~~ki~DfG~~~~~~~ 197 (311)
T d1t46a_ 180 HGRITKICDFGLARDIKN 197 (311)
T ss_dssp TTTEEEECCCGGGSCTTS
T ss_pred ccCcccccccchheeccC
Confidence 999999999999997654
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=3.2e-28 Score=240.96 Aligned_cols=142 Identities=14% Similarity=0.142 Sum_probs=121.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecC--CCCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRES--SPFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~--~~~~~~lv~ 439 (521)
++||+|+||+||+|+.. +++.||||++.. ...+.+|++++.++ +|||||++++++.+. .....|+||
T Consensus 18 ~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~---------~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivm 88 (335)
T d2ozaa1 18 QVLGLGINGKVLQIFNKRTQEKFALKMLQD---------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVM 88 (335)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEC---------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EEeeeccCeEEEEEEECCCCCEEEEEEECC---------cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEE
Confidence 56999999999999985 789999999742 13467899987665 899999999998652 112689999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC---CCCeeeCCCchhhhcc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~---~~~~kl~DfGla~~~~ 516 (521)
|||++|+|.+++..+....+++.++..|+.|++.||+|||+. +|+||||||+|||+++ ++.+||+|||+|+...
T Consensus 89 Ey~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~---~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~ 165 (335)
T d2ozaa1 89 ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 165 (335)
T ss_dssp ECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSTTCCEEECCCTTCEECC
T ss_pred ECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHc---CCccccccccccccccccccccccccccceeeecc
Confidence 999999999999865556799999999999999999999999 9999999999999985 5679999999998765
Q ss_pred c
Q 009965 517 S 517 (521)
Q Consensus 517 ~ 517 (521)
.
T Consensus 166 ~ 166 (335)
T d2ozaa1 166 S 166 (335)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.95 E-value=3.1e-28 Score=235.12 Aligned_cols=147 Identities=17% Similarity=0.212 Sum_probs=127.5
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC--CceEEEEe
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP--FTRMLVFD 440 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~--~~~~lv~e 440 (521)
+.||+|+||+||+|+.. +|+.||||.+..... .+....++|.+|++++++++|||||++++++...+. ...|+|||
T Consensus 13 ~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~lvmE 91 (277)
T d1o6ya_ 13 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLA-RDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME 91 (277)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSTTT-TCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEchhhc-cCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEEEEEE
Confidence 78999999999999985 789999999854322 223445679999999999999999999999976542 24789999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
|+++|+|.+++.... .+++.++..|+.||++||+|||+. +|+||||||+|||++.++..+|+|||.++...
T Consensus 92 ~~~g~~L~~~~~~~~--~l~~~~~~~i~~qi~~al~~lH~~---~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~ 162 (277)
T d1o6ya_ 92 YVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIA 162 (277)
T ss_dssp CCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTSCEEECCCTTCEECC
T ss_pred CCCCCEehhhhcccC--CCCHHHHHHHHHHHHHHHHHHHhC---CccCccccCcccccCccccceeehhhhhhhhc
Confidence 999999999986443 589999999999999999999998 99999999999999999999999999987653
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=4.6e-28 Score=236.37 Aligned_cols=146 Identities=25% Similarity=0.275 Sum_probs=121.7
Q ss_pred chhCcCCCeeEEEEEeCC--------CCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc-CCCCccceeeEEecCCCCc
Q 009965 364 NIIGSSPDSLVYKGTMKG--------GPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFT 434 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~--------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 434 (521)
+.||+|+||.||+|+..+ +..||||++.... ......++.+|+..+.++ +|||||+++++|.++. .
T Consensus 19 ~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~--~ 93 (299)
T d1fgka_ 19 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA---TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG--P 93 (299)
T ss_dssp EECC-----CEEEEEEECC----CCCEEEEEEECCCTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--S
T ss_pred eEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECccc---ChHHHHHHHHHHHHHHHhcCCCeEEecccccccCC--e
Confidence 789999999999998742 2379999884322 223456789999999888 8999999999998876 7
Q ss_pred eEEEEecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC
Q 009965 435 RMLVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE 500 (521)
Q Consensus 435 ~~lv~ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~ 500 (521)
.++||||+++|+|.++++.+. ...++|.++++++.|+|.||+|||+. +||||||||+|||++.
T Consensus 94 ~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~---~ivHrDiKp~NiLl~~ 170 (299)
T d1fgka_ 94 LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTE 170 (299)
T ss_dssp CEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECT
T ss_pred EEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC---CEEeeeecccceeecC
Confidence 999999999999999997442 24589999999999999999999999 9999999999999999
Q ss_pred CCCeeeCCCchhhhccc
Q 009965 501 DFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 501 ~~~~kl~DfGla~~~~~ 517 (521)
++.+||+|||+++...+
T Consensus 171 ~~~~kl~dfg~~~~~~~ 187 (299)
T d1fgka_ 171 DNVMKIADFGLARDIHH 187 (299)
T ss_dssp TCCEEECSTTCCCCGGG
T ss_pred CCCeEeccchhhccccc
Confidence 99999999999997754
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=3.7e-28 Score=233.88 Aligned_cols=148 Identities=11% Similarity=0.099 Sum_probs=124.1
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeecccc--chhhHHHHHHHHHHHhccC--CCCccceeeEEecCCCCceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW--TGYLELYFQREVADLARIN--HENTGKLLGYCRESSPFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~--~~~~~~~~~~E~~~l~~l~--H~niv~l~g~~~~~~~~~~~lv 438 (521)
+.||+|+||+||+|+.. +|+.||||++....... ......++.+|+.++++++ |||||++++++.+.+ ..++|
T Consensus 10 ~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~--~~~lv 87 (273)
T d1xwsa_ 10 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD--SFVLI 87 (273)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS--EEEEE
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCC--eEEEE
Confidence 78999999999999986 78999999985432111 1111234678999999996 999999999999877 89999
Q ss_pred EecCCC-CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC-CCCeeeCCCchhhhcc
Q 009965 439 FDYASN-GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~-~~~~kl~DfGla~~~~ 516 (521)
|||+.+ +++.+++..+. .+++.++..++.|+++||+|||+. +|+||||||+|||++. ++.+||+|||+|+...
T Consensus 88 ~e~~~~~~~l~~~~~~~~--~l~e~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~ 162 (273)
T d1xwsa_ 88 LERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLK 162 (273)
T ss_dssp EECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred EEeccCcchHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CCccccCcccceEEecCCCeEEECccccceecc
Confidence 999976 68888876433 589999999999999999999999 9999999999999985 4799999999998765
Q ss_pred cc
Q 009965 517 SS 518 (521)
Q Consensus 517 ~~ 518 (521)
..
T Consensus 163 ~~ 164 (273)
T d1xwsa_ 163 DT 164 (273)
T ss_dssp SS
T ss_pred cc
Confidence 43
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=2.5e-27 Score=230.47 Aligned_cols=145 Identities=14% Similarity=0.157 Sum_probs=129.0
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +++.||||++.... ......+++.+|+.++++++|||||++++++.+.. ..++|+||+
T Consensus 8 ~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~--~~~iv~~~~ 83 (292)
T d1unla_ 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDD--DDEGVPSSALREICLLKELKHKNIVRLHDVLHSDK--KLTLVFEFC 83 (292)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEESSC--SSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred eEEecCcCeEEEEEEECCCCcEEEEEEEehhh--CChHHHHHHHHHHHHHHhcCcCCEEeecccccccc--ceeEEeeec
Confidence 78999999999999986 78999999985432 22345678999999999999999999999999887 889999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
.++++..+++.. ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||.|+....
T Consensus 84 ~~~~l~~~~~~~--~~~~~~~~~~~~~q~~~aL~~lH~~---~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~ 153 (292)
T d1unla_ 84 DQDLKKYFDSCN--GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGI 153 (292)
T ss_dssp SEEHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred cccccccccccc--cccchhHHHHHHHHHHHHHHHhhcC---CEeeecccCcccccccCCceeeeecchhhcccC
Confidence 999998887643 3588999999999999999999999 999999999999999999999999999987654
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=4e-27 Score=234.49 Aligned_cols=145 Identities=20% Similarity=0.218 Sum_probs=120.5
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC--CceEEEEe
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP--FTRMLVFD 440 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~--~~~~lv~e 440 (521)
+.||+|+||+||+|+.. +|+.||||++.... .....+.+.+|+.+|.+++||||+++++++..... ...++++|
T Consensus 14 ~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~---~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l~~ 90 (345)
T d1pmea_ 14 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE---HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVT 90 (345)
T ss_dssp EECC---CCCEEEEEETTTCSEEEEEEECCTT---CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEE
T ss_pred EEEeeccCeEEEEEEECCCCcEEEEEEEehhc---ChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEEEE
Confidence 78999999999999885 79999999985322 22345678999999999999999999999975431 12355566
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 441 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
|+.+|+|.+++..+ .+++..+..++.|+++||+|||+. +||||||||+|||+++++.+||+|||+|+....
T Consensus 91 ~~~~g~L~~~l~~~---~l~~~~i~~i~~qil~al~yLH~~---~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~ 161 (345)
T d1pmea_ 91 HLMGADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 161 (345)
T ss_dssp ECCCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred eecCCchhhhhhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCcceEEECCCCCEEEcccCceeeccC
Confidence 77789999999643 489999999999999999999999 999999999999999999999999999987643
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=2.2e-27 Score=236.78 Aligned_cols=143 Identities=19% Similarity=0.257 Sum_probs=117.3
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCC----CCceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----PFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~~~~lv 438 (521)
++||+|+||+||+|+.. +|+.||||++...... +.+|++++++++|||||++++++.... ....++|
T Consensus 26 k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~--------~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv 97 (350)
T d1q5ka_ 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF--------KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 97 (350)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS--------CCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEE
T ss_pred eEEeeCcCeEEEEEEECCCCCEEEEEEECccchH--------HHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEE
Confidence 68999999999999986 6899999998543221 347999999999999999999985432 2247899
Q ss_pred EecCCCCChhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCC-CeeeCCCchhhhcc
Q 009965 439 FDYASNGTLYEHLHY-GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-SPKVSPLCLSFLLV 516 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~-~~kl~DfGla~~~~ 516 (521)
|||+++|.+....+. .....+++.++..|+.||++||+|||+. +|+||||||+|||++.++ .+||+|||+++.+.
T Consensus 98 ~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~---~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~ 174 (350)
T d1q5ka_ 98 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174 (350)
T ss_dssp EECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTTCCEEECCCTTCEECC
T ss_pred EeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc---CCcccCCCcceEEEecCCCceeEecccchhhcc
Confidence 999987644433321 2334699999999999999999999998 999999999999999775 89999999998764
Q ss_pred c
Q 009965 517 S 517 (521)
Q Consensus 517 ~ 517 (521)
.
T Consensus 175 ~ 175 (350)
T d1q5ka_ 175 R 175 (350)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=99.94 E-value=5.6e-27 Score=231.90 Aligned_cols=143 Identities=15% Similarity=0.179 Sum_probs=123.1
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCCccceeeEEecCCCCce
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~ 435 (521)
++|. +.||+|+||+||+|+.. +|+.||||++... ..+++.+|+.+|.+++ ||||+++++++........
T Consensus 35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~-------~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~ 107 (328)
T d3bqca1 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTP 107 (328)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS-------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSE
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH-------HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCce
Confidence 3454 78999999999999985 7899999998422 1356889999999995 9999999999976543468
Q ss_pred EEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCC-CeeeCCCchhhh
Q 009965 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-SPKVSPLCLSFL 514 (521)
Q Consensus 436 ~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~-~~kl~DfGla~~ 514 (521)
++||||+++|+|.++.+ .+++.++..++.||+.||+|||+. +|+||||||+|||++.++ .+||+|||+|+.
T Consensus 108 ~~v~e~~~~~~L~~~~~-----~l~e~~i~~i~~qil~aL~~LH~~---gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~ 179 (328)
T d3bqca1 108 ALVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 179 (328)
T ss_dssp EEEEECCCSCBGGGTTT-----SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCGGGCEE
T ss_pred eEEEeecCCCcHHHHhc-----CCCHHHHHHHHHHHHHHHHHHhhc---ccccccccccceEEcCCCCeeeeccccccee
Confidence 99999999999987652 489999999999999999999999 999999999999998655 689999999987
Q ss_pred ccc
Q 009965 515 LVS 517 (521)
Q Consensus 515 ~~~ 517 (521)
..+
T Consensus 180 ~~~ 182 (328)
T d3bqca1 180 YHP 182 (328)
T ss_dssp CCT
T ss_pred ccC
Confidence 654
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=1.9e-27 Score=234.13 Aligned_cols=151 Identities=19% Similarity=0.151 Sum_probs=128.4
Q ss_pred hhhh--chhCcCCCeeEEEEEeC----CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCC-CCccceeeEEecCCC
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH-ENTGKLLGYCRESSP 432 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~g~~~~~~~ 432 (521)
++|. +.||+|+||+||+|+.. +|+.||||.+............+.+.+|++++.+++| |||+++++++.+..
T Consensus 24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~- 102 (322)
T d1vzoa_ 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET- 102 (322)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT-
T ss_pred hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCC-
Confidence 3454 89999999999999862 4789999998554322222334568899999999977 89999999998877
Q ss_pred CceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchh
Q 009965 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512 (521)
Q Consensus 433 ~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla 512 (521)
..+++|||+.+|+|.+++.... .+.......++.|++.||+|+|+. +|+||||||+|||+|.++.+||+|||+|
T Consensus 103 -~~~~v~e~~~~~~L~~~i~~~~--~~~e~~~~~~~~Qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~vkL~DFG~a 176 (322)
T d1vzoa_ 103 -KLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLS 176 (322)
T ss_dssp -EEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred -ceeeeeecccccHHHHHHHhcc--cccHHHHHHHHHHHHHHHHHhhcC---CEEeccCCccceeecCCCCEEEeeccch
Confidence 8999999999999999997544 367888899999999999999999 9999999999999999999999999999
Q ss_pred hhccc
Q 009965 513 FLLVS 517 (521)
Q Consensus 513 ~~~~~ 517 (521)
+.+..
T Consensus 177 ~~~~~ 181 (322)
T d1vzoa_ 177 KEFVA 181 (322)
T ss_dssp EECCG
T ss_pred hhhcc
Confidence 87643
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=1.9e-26 Score=227.07 Aligned_cols=146 Identities=20% Similarity=0.289 Sum_probs=120.9
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCC------CCceE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS------PFTRM 436 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------~~~~~ 436 (521)
+.||+|+||+||+|+.. +|+.||||++..... .....+++.+|+.++++++||||+++++++.... ....+
T Consensus 16 ~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~--~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~~~~~ 93 (318)
T d3blha1 16 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENE--KEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIY 93 (318)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEC----C--TTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC----------CEE
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEehhhc--chHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccCceEE
Confidence 78999999999999985 789999999854432 2234567899999999999999999999986532 12579
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcc
Q 009965 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516 (521)
Q Consensus 437 lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~ 516 (521)
+||||++++.+..+.. ....++...+..|+.|++.||.|||+. +|+||||||+|||+++++.+||+|||+++.+.
T Consensus 94 iv~e~~~~~~~~~~~~--~~~~~~~~~~~~i~~qil~~l~~lH~~---~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~ 168 (318)
T d3blha1 94 LVFDFCEHDLAGLLSN--VLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFS 168 (318)
T ss_dssp EEEECCCEEHHHHHTC--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEeccCCCccchhhh--cccccccHHHHHHHHHHHHHHHHhccC---CEEecCcCchheeecCCCcEEeeecceeeecc
Confidence 9999999877765543 333588899999999999999999999 99999999999999999999999999997654
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=2e-26 Score=229.55 Aligned_cols=146 Identities=20% Similarity=0.220 Sum_probs=119.0
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCC----CceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~lv 438 (521)
+.||+|+||+||+|+.. +|+.||||++... .......+.+.+|+.+|++++|||||+++++|...+. ...++|
T Consensus 24 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~--~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv 101 (346)
T d1cm8a_ 24 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRP--FQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLV 101 (346)
T ss_dssp EEC------CEEEEEETTTCCEEEEEECSST--TSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEE
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEchh--hcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccceEEEE
Confidence 68999999999999986 6899999998532 2233445678999999999999999999999976541 146999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhcccc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~~ 518 (521)
|||+ +++|..+.+.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+|++|||+|+..+..
T Consensus 102 ~e~~-~~~l~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~ 174 (346)
T d1cm8a_ 102 MPFM-GTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQADSE 174 (346)
T ss_dssp EECC-SEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCSS
T ss_pred Eecc-cccHHHHHHhc---cccHHHHHHHHHHHHHHHHHHHhC---CCcccccCcchhhcccccccccccccceeccCCc
Confidence 9999 45787776532 489999999999999999999999 9999999999999999999999999999877643
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=5.2e-26 Score=226.77 Aligned_cols=146 Identities=21% Similarity=0.192 Sum_probs=121.0
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCC---CCceEEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS---PFTRMLVF 439 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~---~~~~~lv~ 439 (521)
+.||+|+||+||+|+.. +|+.||||++.... ......+++.+|+.++++++|||+|++++++.... ....++++
T Consensus 24 ~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~~i~ 101 (348)
T d2gfsa1 24 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 101 (348)
T ss_dssp EECGGGTTSSEEEEEETTTTEEEEEEECSCTT--SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCCEEE
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEECchh--cChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceEEEE
Confidence 78999999999999975 78999999985432 22334567899999999999999999999986432 11356778
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 440 ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
||+.+|+|.++++.+ .+++.++..|+.||+.||+|||+. +|+||||||+|||++.++.+|++|||++.....
T Consensus 102 ~~~~gg~L~~~~~~~---~l~e~~~~~i~~qil~aL~~LH~~---giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~ 173 (348)
T d2gfsa1 102 THLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 173 (348)
T ss_dssp EECCSEEHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCC----CCTG
T ss_pred EeecCCchhhhcccc---cccHHHHHHHHHHHHHHHHHHHhC---CCcccccCCccccccccccccccccchhcccCc
Confidence 888899999999532 499999999999999999999999 999999999999999999999999999987654
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=6.6e-26 Score=221.78 Aligned_cols=151 Identities=20% Similarity=0.243 Sum_probs=120.0
Q ss_pred hhhh--chhCcCCCeeEEEEEeC-C-CCEEEEEEeeeeccccchhhHHHHHHHHHHHhcc---CCCCccceeeEEecC--
Q 009965 360 EDFS--NIIGSSPDSLVYKGTMK-G-GPEIAVISLCIKEEHWTGYLELYFQREVADLARI---NHENTGKLLGYCRES-- 430 (521)
Q Consensus 360 ~~~~--~~ig~G~~g~Vy~~~~~-~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~~-- 430 (521)
++|. +.||+|+||+||+|+.. + ++.||||++...... ......+.+|+.+++.+ +|||||+++++|...
T Consensus 7 ~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~--~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~ 84 (305)
T d1blxa_ 7 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE--EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 84 (305)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCT--TSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred CCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhcc--chHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccc
Confidence 3454 78999999999999984 4 567999998654322 11223456777776665 899999999998532
Q ss_pred -CCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCC
Q 009965 431 -SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPL 509 (521)
Q Consensus 431 -~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~Df 509 (521)
.....++++||+++|.+..... .....+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+||
T Consensus 85 ~~~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~~~~~~~~qi~~aL~yLH~~---~ivHrDiKp~NILi~~~~~~kl~df 160 (305)
T d1blxa_ 85 DRETKLTLVFEHVDQDLTTYLDK-VPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 160 (305)
T ss_dssp SSEEEEEEEEECCSCBHHHHHHH-SCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSC
T ss_pred ccCceEEEEEEeccCCchhhhhh-ccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecCCCccEEEEcCCCCeeecch
Confidence 1126799999999877655443 3444689999999999999999999999 9999999999999999999999999
Q ss_pred chhhhcc
Q 009965 510 CLSFLLV 516 (521)
Q Consensus 510 Gla~~~~ 516 (521)
|+++...
T Consensus 161 g~~~~~~ 167 (305)
T d1blxa_ 161 GLARIYS 167 (305)
T ss_dssp CSCCCCC
T ss_pred hhhhhhc
Confidence 9998654
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.92 E-value=2.9e-25 Score=215.68 Aligned_cols=141 Identities=11% Similarity=0.118 Sum_probs=121.0
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCC-CCccceeeEEecCCCCceEEEEec
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH-ENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
+.||+|+||+||+|+.. +|+.||||.+..... ...+.+|++.+..++| +|++.+++++.... ..++||||
T Consensus 11 ~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~------~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~--~~~~vme~ 82 (293)
T d1csna_ 11 RRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD------APQLRDEYRTYKLLAGCTGIPNVYYFGQEGL--HNVLVIDL 82 (293)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEECCTT------SCCHHHHHHHHHHTTTCTTCCCEEEEEEETT--EEEEEEEC
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEccccC------cHHHHHHHHHHHHhcCCCCCCEEEEEeecCC--ccEEEEEe
Confidence 78999999999999986 688999998744322 1246788999999965 89999999998877 78999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecC-----CCCeeeCCCchhhhcc
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-----DFSPKVSPLCLSFLLV 516 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~-----~~~~kl~DfGla~~~~ 516 (521)
+ +|+|.++++... ..+++.++..|+.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+|+.+.
T Consensus 83 ~-~~~l~~~~~~~~-~~~~~~~~~~i~~q~~~~l~~lH~~---giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~ 157 (293)
T d1csna_ 83 L-GPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 157 (293)
T ss_dssp C-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred c-CCCHHHHHHhhc-cchhhHHHHHHHHHHHHHHHHHHHC---CceeccCCccceeecCcccccCCceEEcccceeEEcc
Confidence 9 579999986433 3589999999999999999999999 9999999999999974 5789999999999865
Q ss_pred c
Q 009965 517 S 517 (521)
Q Consensus 517 ~ 517 (521)
.
T Consensus 158 ~ 158 (293)
T d1csna_ 158 D 158 (293)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=6.7e-25 Score=219.09 Aligned_cols=144 Identities=18% Similarity=0.183 Sum_probs=116.2
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCC----CCceEEE
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----PFTRMLV 438 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----~~~~~lv 438 (521)
++||+|+||+||+|+.. +|+.||||++..... .....+++.+|+.++++++|||||++++++.... ....|+|
T Consensus 23 ~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~--~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~iv 100 (355)
T d2b1pa1 23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ--NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLV 100 (355)
T ss_dssp EECSCC--CEEEEEEETTTTEEEEEEEEESTTS--SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEE
T ss_pred EEeecCcCeEEEEEEECCCCCEEEEEEEChhhc--CHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCceeEEE
Confidence 78999999999999986 689999999854332 2334567899999999999999999999996432 1368999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCCCchhhhccc
Q 009965 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 439 ~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~~~~ 517 (521)
|||+.++ +.+.+. ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+|++|||+++....
T Consensus 101 ~Ey~~~~-l~~~~~----~~~~~~~i~~~~~qil~gl~~LH~~---giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~ 171 (355)
T d2b1pa1 101 MELMDAN-LCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 171 (355)
T ss_dssp EECCSEE-HHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred EeccchH-HHHhhh----cCCCHHHHHHHHHHHHHHHHHhhhc---ccccccCCccccccccccceeeechhhhhcccc
Confidence 9999765 444443 2489999999999999999999999 999999999999999999999999999886543
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.91 E-value=7.5e-25 Score=213.57 Aligned_cols=142 Identities=15% Similarity=0.226 Sum_probs=115.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCccceeeEEecCCCCceEEEEecC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ey~ 442 (521)
+.||+|+||+||+|+.. +|+.||||.+..+... +++..|+++++.++|+|+|..++++..... ..++||||+
T Consensus 13 ~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~------~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~-~~~ivme~~ 85 (299)
T d1ckia_ 13 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH------PQLHIESKIYKMMQGGVGIPTIRWCGAEGD-YNVMVMELL 85 (299)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEESCTTS------CCHHHHHHHHHHSTTSTTCCCEEEEEEETT-EEEEEEECC
T ss_pred EEEeeCCCcEEEEEEECCCCCEEEEEEEchhccC------HHHHHHHHHHHHccCCCcccEEEEEEecCC-EEEEEEEEc
Confidence 78999999999999985 6889999987543221 247889999999988887777666644332 688999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeec---CCCCeeeCCCchhhhccc
Q 009965 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT---EDFSPKVSPLCLSFLLVS 517 (521)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld---~~~~~kl~DfGla~~~~~ 517 (521)
++ ++.+.+... ...+++.++..++.|++.||+|||+. +|+||||||+|||++ .+..+||+|||+|+.+.+
T Consensus 86 ~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~ 158 (299)
T d1ckia_ 86 GP-SLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 158 (299)
T ss_dssp CC-BHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBC
T ss_pred CC-chhhhhhhc-cCCCcHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHhhccccccCCCceeeeeccCcceeccc
Confidence 54 676666433 23589999999999999999999999 999999999999875 456799999999998754
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.87 E-value=2.4e-22 Score=182.24 Aligned_cols=135 Identities=12% Similarity=0.102 Sum_probs=105.7
Q ss_pred hchhCcCCCeeEEEEEeCCCCEEEEEEeeeecc--------------ccchhhHHHHHHHHHHHhccCCCCccceeeEEe
Q 009965 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEE--------------HWTGYLELYFQREVADLARINHENTGKLLGYCR 428 (521)
Q Consensus 363 ~~~ig~G~~g~Vy~~~~~~~~~vavk~~~~~~~--------------~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~ 428 (521)
.+.||+|+||+||+|+..+|+.||||.+..... .........+.+|...+.++.|.+++..+++.
T Consensus 5 g~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~- 83 (191)
T d1zara2 5 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE- 83 (191)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE-
T ss_pred CCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec-
Confidence 478999999999999998999999998642110 00111234566789999999999999887653
Q ss_pred cCCCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeecCCCCeeeCC
Q 009965 429 ESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSP 508 (521)
Q Consensus 429 ~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NiLld~~~~~kl~D 508 (521)
..+++|||++++.+.++ ++....+++.|+++|++|||+. +|+||||||+|||++++ .++|+|
T Consensus 84 -----~~~lvme~~~~~~~~~l---------~~~~~~~i~~ql~~~l~~lH~~---giiHrDiKP~NILv~~~-~~~liD 145 (191)
T d1zara2 84 -----GNAVLMELIDAKELYRV---------RVENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVSEE-GIWIID 145 (191)
T ss_dssp -----TTEEEEECCCCEEGGGC---------CCSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEETT-EEEECC
T ss_pred -----CCEEEEEeeccccccch---------hhHHHHHHHHHHHHHHHHHhhC---CEEEccCChhheeeeCC-CEEEEE
Confidence 24799999998655432 2333567899999999999998 99999999999999975 489999
Q ss_pred Cchhhhcc
Q 009965 509 LCLSFLLV 516 (521)
Q Consensus 509 fGla~~~~ 516 (521)
||+|+...
T Consensus 146 FG~a~~~~ 153 (191)
T d1zara2 146 FPQSVEVG 153 (191)
T ss_dssp CTTCEETT
T ss_pred CCCcccCC
Confidence 99997664
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.82 E-value=7.8e-21 Score=189.85 Aligned_cols=145 Identities=17% Similarity=0.127 Sum_probs=113.8
Q ss_pred chhCcCCCeeEEEEEeC-CCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-----------CCCccceeeEEecCC
Q 009965 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-----------HENTGKLLGYCRESS 431 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----------H~niv~l~g~~~~~~ 431 (521)
++||+|+||+||+|+.. +|+.||||++.... ...+.+.+|+.++.+++ |+|||++++++....
T Consensus 19 ~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-----~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~ 93 (362)
T d1q8ya_ 19 RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-----VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKG 93 (362)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSCH-----HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEE
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-----cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeecc
Confidence 78999999999999985 78999999985321 22356788998888775 578999999986544
Q ss_pred CCceEEEEecCCCCC-hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeEecCCCCCCeeecCCC------C
Q 009965 432 PFTRMLVFDYASNGT-LYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTEDF------S 503 (521)
Q Consensus 432 ~~~~~lv~ey~~~gs-L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlk~~NiLld~~~------~ 503 (521)
....+++++++..+. ............+++..+..++.||+.||+|||+ . +|+||||||+|||++.++ .
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~---~IvHrDlKp~NIll~~~~~~~~~~~ 170 (362)
T d1q8ya_ 94 PNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC---GIIHTDIKPENVLMEIVDSPENLIQ 170 (362)
T ss_dssp TTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT---CEECSCCSGGGEEEEEEETTTTEEE
T ss_pred ccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhc---CcccccCChhHeeeeccCcccccce
Confidence 336677777765543 3333333444568999999999999999999998 5 899999999999998655 3
Q ss_pred eeeCCCchhhhcc
Q 009965 504 PKVSPLCLSFLLV 516 (521)
Q Consensus 504 ~kl~DfGla~~~~ 516 (521)
++++|||.|+...
T Consensus 171 ~kl~dfg~s~~~~ 183 (362)
T d1q8ya_ 171 IKIADLGNACWYD 183 (362)
T ss_dssp EEECCCTTCEETT
T ss_pred eeEeecccccccc
Confidence 8999999987654
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.82 E-value=5.7e-21 Score=186.91 Aligned_cols=174 Identities=30% Similarity=0.550 Sum_probs=149.2
Q ss_pred CCEEEEEecC-CCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceee
Q 009965 70 DRVLKINISG-SSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (521)
Q Consensus 70 ~~l~~L~L~~-n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (521)
.++++|+|++ |+++|.+|++|++|++|++|+|++|++.+..|..+..+.+|++++++.|.+.+.+|..+.+++.|+.++
T Consensus 76 ~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~ 155 (313)
T d1ogqa_ 76 PYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGIT 155 (313)
T ss_dssp TTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEE
T ss_pred ccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCcccceee
Confidence 4789999997 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCcccCchhhhCCCCC-CEEeCCCCCCCccCCCCC-------------------------CC--------------
Q 009965 149 LQSNGLTGRLPAELGNLISL-EELHLDRNRLQGAVPAGS-------------------------NS-------------- 188 (521)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L-~~L~Ls~N~l~g~~p~~~-------------------------~~-------------- 188 (521)
+++|.++|.+|..+..+.++ +.++++.|+++|..|... ..
T Consensus 156 l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~ 235 (313)
T d1ogqa_ 156 FDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAF 235 (313)
T ss_dssp CCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECC
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999988888776 778888888776554210 00
Q ss_pred -----cccccccccccccCCcCc-----ccCCCCCCEEeccCCccccCCccc--cccCCCcccCCCc
Q 009965 189 -----GYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKC--LEYLPSTSFQGNC 243 (521)
Q Consensus 189 -----~~~~~l~~l~l~~n~l~~-----~~~l~~L~~L~ls~N~l~g~ip~~--l~~l~~l~~~~N~ 243 (521)
.....+..+++++|++++ +..+++|++|||++|+|+|.+|.. +.+|+.+++.+|+
T Consensus 236 ~~~~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~~~L~~L~~l~l~~N~ 302 (313)
T d1ogqa_ 236 DLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNK 302 (313)
T ss_dssp BGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSS
T ss_pred cccccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCCcccCCCCCHHHhCCCc
Confidence 112356678999999874 566899999999999999999964 5778888999994
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.81 E-value=1.1e-19 Score=173.47 Aligned_cols=174 Identities=28% Similarity=0.296 Sum_probs=148.7
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
..++.|+|++|.|++..+..|.++++|++|+|++|+|+. +| .++.+++|++|+|++|+++ .+|..+.++++|+.|++
T Consensus 31 ~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~Ls~N~l~-~~~~~~~~l~~L~~L~l 107 (266)
T d1p9ag_ 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQ-VDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107 (266)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EE-CCSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEEC
T ss_pred cCCCEEECcCCcCCCcCHHHhhccccccccccccccccc-cc-ccccccccccccccccccc-ccccccccccccccccc
Confidence 479999999999999777889999999999999999984 44 3678999999999999998 56778999999999999
Q ss_pred ccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc-----cCCCCCCEEeccCCccc
Q 009965 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFV 224 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~l~~L~~L~ls~N~l~ 224 (521)
++|.+.+..+..+..+.+|++|++++|.++ .+|...... ...+..+++++|+++++ ..+++|++|||++|+|+
T Consensus 108 ~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~-~l~~~~~~~-l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~ 185 (266)
T d1p9ag_ 108 SFNRLTSLPLGALRGLGELQELYLKGNELK-TLPPGLLTP-TPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY 185 (266)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCC-CCCTTTTTT-CTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred cccccceeeccccccccccccccccccccc-eeccccccc-cccchhcccccccccccCccccccccccceeecccCCCc
Confidence 999999888888999999999999999998 555543332 34677889999998764 45899999999999999
Q ss_pred cCCcccc---ccCCCcccCCCcCCCCCC
Q 009965 225 GSIPKCL---EYLPSTSFQGNCLQNKDP 249 (521)
Q Consensus 225 g~ip~~l---~~l~~l~~~~N~l~~~~~ 249 (521)
.+|..+ .+|+.+++++|++.+.|.
T Consensus 186 -~lp~~~~~~~~L~~L~L~~Np~~CdC~ 212 (266)
T d1p9ag_ 186 -TIPKGFFGSHLLPFAFLHGNPWLCNCE 212 (266)
T ss_dssp -CCCTTTTTTCCCSEEECCSCCBCCSGG
T ss_pred -ccChhHCCCCCCCEEEecCCCCCCCcc
Confidence 888765 456778999999988764
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.78 E-value=7.8e-20 Score=165.62 Aligned_cols=102 Identities=26% Similarity=0.338 Sum_probs=58.7
Q ss_pred EEecCCCCCccCCccccCCCCCCEEECcCCcccccC-CccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeeccccc
Q 009965 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGII-PKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNG 153 (521)
Q Consensus 75 L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 153 (521)
++.++++|+. +|+.+. +++++|+|++|+|++.+ +..|..+++|+.|+|++|++.+..+..|..+++|++|+|++|+
T Consensus 13 v~Cs~~~L~~-iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~ 89 (192)
T d1w8aa_ 13 VDCTGRGLKE-IPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 89 (192)
T ss_dssp EECTTSCCSS-CCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCC
T ss_pred EEEeCCCcCc-cCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecccc
Confidence 3444455553 444432 45666666666665433 3445566666666666666665556666666666666666666
Q ss_pred CcccCchhhhCCCCCCEEeCCCCCCC
Q 009965 154 LTGRLPAELGNLISLEELHLDRNRLQ 179 (521)
Q Consensus 154 l~g~~p~~~~~l~~L~~L~Ls~N~l~ 179 (521)
+++..|..|.++++|++|+|++|+|+
T Consensus 90 l~~l~~~~F~~l~~L~~L~L~~N~l~ 115 (192)
T d1w8aa_ 90 IKEISNKMFLGLHQLKTLNLYDNQIS 115 (192)
T ss_dssp CCEECSSSSTTCTTCCEEECCSSCCC
T ss_pred ccccCHHHHhCCCcccccccCCcccc
Confidence 66555555666666666666666665
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.77 E-value=2.2e-18 Score=165.82 Aligned_cols=177 Identities=21% Similarity=0.195 Sum_probs=105.6
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCcc-------------------------ccCCCCCcEEE
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKE-------------------------LGLLKRLKILD 124 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~-------------------------~~~l~~L~~L~ 124 (521)
..++.|+|++|.|+...+..|.++++|++|++++|++.+..+.. |.++++|++|+
T Consensus 32 ~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~ 111 (284)
T d1ozna_ 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (284)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEEe
Confidence 46789999999999877778999999999999999886554444 44555555555
Q ss_pred ccCCcCCCCCCcccCCCccCceeecccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCc
Q 009965 125 LGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANL 204 (521)
Q Consensus 125 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l 204 (521)
+++|.+....+..+..+++|+.+++++|++++..+..|..+++|+.|++++|++++ +|...+.. ...+..++++.|++
T Consensus 112 l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~-l~~~~f~~-l~~L~~l~l~~N~l 189 (284)
T d1ozna_ 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISS-VPERAFRG-LHSLDRLLLHQNRV 189 (284)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCE-ECTTTTTT-CTTCCEEECCSSCC
T ss_pred cCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccc-cchhhhcc-ccccchhhhhhccc
Confidence 55555554444455555555555555555554444555555556666666655553 22222211 13445555555555
Q ss_pred Cc-----ccCCCCCCEEeccCCccccCCccccc---cCCCcccCCCcCCCCC
Q 009965 205 TG-----LCHLSQLKVADFSYNFFVGSIPKCLE---YLPSTSFQGNCLQNKD 248 (521)
Q Consensus 205 ~~-----~~~l~~L~~L~ls~N~l~g~ip~~l~---~l~~l~~~~N~l~~~~ 248 (521)
++ +..+++|++||+++|++.+..|..+. +|..+++++|++.+.|
T Consensus 190 ~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C~C 241 (284)
T d1ozna_ 190 AHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDC 241 (284)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSG
T ss_pred cccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCCCc
Confidence 43 23345566666666666655544442 3444555666555543
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.74 E-value=1e-17 Score=159.61 Aligned_cols=169 Identities=26% Similarity=0.277 Sum_probs=139.5
Q ss_pred CEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecc
Q 009965 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
....++.++++|+. +|+.+. ++|++|+|++|+|++..+..|.++++|++|+|++|+|+ .+| .++.+++|++|+|+
T Consensus 11 ~~~~v~C~~~~L~~-iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~-~l~-~~~~l~~L~~L~Ls 85 (266)
T d1p9ag_ 11 SHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQ-VDGTLPVLGTLDLS 85 (266)
T ss_dssp TCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEE-CCSCCTTCCEEECC
T ss_pred CCeEEEccCCCCCe-eCcCcC--cCCCEEECcCCcCCCcCHHHhhcccccccccccccccc-ccc-cccccccccccccc
Confidence 45567999999996 677664 68999999999999877788999999999999999998 555 46789999999999
Q ss_pred cccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc-----cCCCCCCEEeccCCcccc
Q 009965 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFVG 225 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~l~~L~~L~ls~N~l~g 225 (521)
+|+++ .+|..+..+++|+.|++++|.+.+ ++..... ....+..++++.|.++.+ ..+++|+.+++++|++++
T Consensus 86 ~N~l~-~~~~~~~~l~~L~~L~l~~~~~~~-~~~~~~~-~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~ 162 (266)
T d1p9ag_ 86 HNQLQ-SLPLLGQTLPALTVLDVSFNRLTS-LPLGALR-GLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTE 162 (266)
T ss_dssp SSCCS-SCCCCTTTCTTCCEEECCSSCCCC-CCSSTTT-TCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSC
T ss_pred ccccc-ccccccccccccccccccccccce-eeccccc-cccccccccccccccceeccccccccccchhcccccccccc
Confidence 99999 567789999999999999999984 4433222 234677888899988764 457899999999999997
Q ss_pred CCcccc---ccCCCcccCCCcCCCC
Q 009965 226 SIPKCL---EYLPSTSFQGNCLQNK 247 (521)
Q Consensus 226 ~ip~~l---~~l~~l~~~~N~l~~~ 247 (521)
..|..+ .+|+.|++++|.++.+
T Consensus 163 ~~~~~~~~l~~L~~L~Ls~N~L~~l 187 (266)
T d1p9ag_ 163 LPAGLLNGLENLDTLLLQENSLYTI 187 (266)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred cCccccccccccceeecccCCCccc
Confidence 776554 5677899999988864
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.71 E-value=1.7e-17 Score=149.88 Aligned_cols=167 Identities=19% Similarity=0.236 Sum_probs=138.0
Q ss_pred CCccceeeCCC---------CCCEEEEEecCCCCCccC-CccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccC
Q 009965 58 CHWTGIACSDA---------RDRVLKINISGSSLKGFL-APELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGT 127 (521)
Q Consensus 58 c~w~gv~C~~~---------~~~l~~L~L~~n~l~~~~-p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 127 (521)
|.|..|.|+.. ...++.|+|++|.|++.+ +..|..+++|++|+|++|++.+..+..|..+++|++|+|++
T Consensus 8 C~~~~v~Cs~~~L~~iP~~lp~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~ 87 (192)
T d1w8aa_ 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred EcCCEEEEeCCCcCccCCCCCCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecc
Confidence 67888889731 247899999999998755 55689999999999999999999999999999999999999
Q ss_pred CcCCCCCCcccCCCccCceeecccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc
Q 009965 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL 207 (521)
Q Consensus 128 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~ 207 (521)
|+|+...|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|.+....+... +
T Consensus 88 N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~~~~--------------------~ 147 (192)
T d1w8aa_ 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAW--------------------F 147 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHH--------------------H
T ss_pred ccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccccchHH--------------------H
Confidence 99998888899999999999999999998888899999999999999999874322110 0
Q ss_pred cCCCCCCEEeccCCccccCCccccccCCCcccCCCcCCC
Q 009965 208 CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQN 246 (521)
Q Consensus 208 ~~l~~L~~L~ls~N~l~g~ip~~l~~l~~l~~~~N~l~~ 246 (521)
. ..++.+.+..|.+....|..+..++-+++..|.+.+
T Consensus 148 ~--~~l~~~~l~~~~~~c~~p~~l~~~~l~~L~~n~l~C 184 (192)
T d1w8aa_ 148 A--EWLRKKSLNGGAARCGAPSKVRDVQIKDLPHSEFKC 184 (192)
T ss_dssp H--HHHHHHCCSGGGCBBCSSTTTTTSBGGGSCTTTCCC
T ss_pred h--hhhhhhcccCCCeEeCCChhhcCCEeeecCHhhCcC
Confidence 0 113334566777887888888887778888886665
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.71 E-value=8e-17 Score=156.33 Aligned_cols=185 Identities=24% Similarity=0.380 Sum_probs=143.5
Q ss_pred CCccceeeCCC---------CCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCC
Q 009965 58 CHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTN 128 (521)
Q Consensus 58 c~w~gv~C~~~---------~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 128 (521)
|.|++|.|+.. ...++.|+|++|+|+...+..|.++++|++|++++|.+....|..|.++++|++|++++|
T Consensus 10 c~~~~~~C~~~~L~~lP~~l~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n 89 (305)
T d1xkua_ 10 CHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN 89 (305)
T ss_dssp EETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSS
T ss_pred ecCCEEEecCCCCCccCCCCCCCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCC
Confidence 68999999741 356899999999999876678999999999999999999888999999999999999999
Q ss_pred cCCCCCCc------------------------------------------------ccCCCccCceeecccccCcccCch
Q 009965 129 QLTGPIPP------------------------------------------------EIGNLTGLVKINLQSNGLTGRLPA 160 (521)
Q Consensus 129 ~l~g~~p~------------------------------------------------~~~~l~~L~~L~Ls~N~l~g~~p~ 160 (521)
+++ .+|. .+..+++|+.+++++|.++ .+|.
T Consensus 90 ~l~-~l~~~~~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~-~l~~ 167 (305)
T d1xkua_ 90 QLK-ELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQ 167 (305)
T ss_dssp CCS-BCCSSCCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCS
T ss_pred ccC-cCccchhhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCcc-ccCc
Confidence 887 3332 1334566777888888777 4554
Q ss_pred hhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc-----cCCCCCCEEeccCCccccCCcccc---c
Q 009965 161 ELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFVGSIPKCL---E 232 (521)
Q Consensus 161 ~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~l~~L~~L~ls~N~l~g~ip~~l---~ 232 (521)
.+ +++|+.|++++|..++..+..... ...+..+++++|.++++ ..+++|++|+|++|+|+ .+|..+ .
T Consensus 168 ~~--~~~L~~L~l~~n~~~~~~~~~~~~--~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~ 242 (305)
T d1xkua_ 168 GL--PPSLTELHLDGNKITKVDAASLKG--LNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHK 242 (305)
T ss_dssp SC--CTTCSEEECTTSCCCEECTGGGTT--CTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCS
T ss_pred cc--CCccCEEECCCCcCCCCChhHhhc--cccccccccccccccccccccccccccceeeeccccccc-cccccccccc
Confidence 43 578999999999988766643222 23566777888877764 45789999999999998 677665 4
Q ss_pred cCCCcccCCCcCCCCCC
Q 009965 233 YLPSTSFQGNCLQNKDP 249 (521)
Q Consensus 233 ~l~~l~~~~N~l~~~~~ 249 (521)
+|+.+++++|+++....
T Consensus 243 ~L~~L~Ls~N~i~~i~~ 259 (305)
T d1xkua_ 243 YIQVVYLHNNNISAIGS 259 (305)
T ss_dssp SCCEEECCSSCCCCCCT
T ss_pred CCCEEECCCCccCccCh
Confidence 56678889998887643
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.64 E-value=1.3e-15 Score=138.13 Aligned_cols=153 Identities=28% Similarity=0.364 Sum_probs=118.0
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|++++|+++.. +.+..+++|++|+|++|++++..| +.++++|++|++++|.+. .+| .+.+++.|+.|++
T Consensus 40 ~~l~~L~l~~~~i~~l--~~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~-~~~-~l~~l~~L~~L~l 113 (199)
T d2omxa2 40 DQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIA-DIT-PLANLTNLTGLTL 113 (199)
T ss_dssp TTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-CCG-GGTTCTTCSEEEC
T ss_pred cCCCEEECCCCCCCCc--cccccCCCcCcCccccccccCccc--ccCCcccccccccccccc-ccc-ccccccccccccc
Confidence 3688999999999863 358899999999999999986543 899999999999999987 454 4889999999999
Q ss_pred ccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCc---ccCCCCCCEEeccCCccccC
Q 009965 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGS 226 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~---~~~l~~L~~L~ls~N~l~g~ 226 (521)
++|.+... ..+..+++|+.|++++|++. .+|... ....+..+++.+|.+++ +.++++|+.|++++|+++.
T Consensus 114 ~~~~~~~~--~~~~~l~~L~~L~l~~n~l~-~~~~l~---~~~~L~~L~l~~n~l~~l~~l~~l~~L~~L~ls~N~i~~- 186 (199)
T d2omxa2 114 FNNQITDI--DPLKNLTNLNRLELSSNTIS-DISALS---GLTSLQQLNFSSNQVTDLKPLANLTTLERLDISSNKVSD- 186 (199)
T ss_dssp CSSCCCCC--GGGTTCTTCSEEECCSSCCC-CCGGGT---TCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCC-
T ss_pred cccccccc--cccchhhhhHHhhhhhhhhc-cccccc---ccccccccccccccccCCccccCCCCCCEEECCCCCCCC-
Confidence 99998843 34888999999999999987 344211 12456677777777665 3457788888888888774
Q ss_pred CccccccCCC
Q 009965 227 IPKCLEYLPS 236 (521)
Q Consensus 227 ip~~l~~l~~ 236 (521)
+| .+..++.
T Consensus 187 i~-~l~~L~~ 195 (199)
T d2omxa2 187 IS-VLAKLTN 195 (199)
T ss_dssp CG-GGGGCTT
T ss_pred Cc-cccCCCC
Confidence 44 3444443
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.62 E-value=1.6e-16 Score=152.62 Aligned_cols=156 Identities=21% Similarity=0.242 Sum_probs=132.7
Q ss_pred CEEEEEe-cCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 71 RVLKINI-SGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 71 ~l~~L~L-~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+..++. ..+.++...+..|.++++|++|+|++|.+....+..+..+++|+.+++++|++++..+..|..+++|+.|+|
T Consensus 81 ~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l 160 (284)
T d1ozna_ 81 LLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFL 160 (284)
T ss_dssp TCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cccccccccccccccccchhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhccc
Confidence 4556655 467777777888999999999999999998877888899999999999999999777788999999999999
Q ss_pred ccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc-----cCCCCCCEEeccCCccc
Q 009965 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFV 224 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~-----~~l~~L~~L~ls~N~l~ 224 (521)
++|++++..|..|.++++|+++++++|++++..|..+.. ..++..++++.|.+.++ ..+++|++|++++|.+.
T Consensus 161 ~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~--l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~ 238 (284)
T d1ozna_ 161 HGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRD--LGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238 (284)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTT--CTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred ccCcccccchhhhccccccchhhhhhccccccChhHhhh--hhhcccccccccccccccccccccccccCEEEecCCCCC
Confidence 999999888889999999999999999999776664332 34788899999998764 46889999999999998
Q ss_pred cCCc
Q 009965 225 GSIP 228 (521)
Q Consensus 225 g~ip 228 (521)
+.-+
T Consensus 239 C~C~ 242 (284)
T d1ozna_ 239 CDCR 242 (284)
T ss_dssp CSGG
T ss_pred CCcc
Confidence 6543
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.60 E-value=4.9e-15 Score=135.48 Aligned_cols=151 Identities=23% Similarity=0.338 Sum_probs=115.9
Q ss_pred CEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecc
Q 009965 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
.++.|++++|.++... .+..+++|++|+|++|+|++. + .++.+++|++|++++|++++ +| .+.++++|+.|+++
T Consensus 47 ~L~~L~l~~~~i~~l~--~l~~l~~L~~L~L~~n~i~~l-~-~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~ 120 (210)
T d1h6ta2 47 SIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDI-K-PLANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLE 120 (210)
T ss_dssp TCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECT
T ss_pred CccEEECcCCCCCCch--hHhhCCCCCEEeCCCccccCc-c-ccccCccccccccccccccc-cc-cccccccccccccc
Confidence 6888999999998743 488899999999999999864 3 37889999999999999984 55 58889999999999
Q ss_pred cccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc---cCCCCCCEEeccCCccccCC
Q 009965 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGSI 227 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~---~~l~~L~~L~ls~N~l~g~i 227 (521)
+|.+. .+ ..+..+++|+.++++.|.+++..+.. ...++..+++++|+++++ ..+++|+.|++++|+++ .+
T Consensus 121 ~~~~~-~~-~~l~~l~~l~~l~~~~n~l~~~~~~~----~l~~L~~l~l~~n~l~~i~~l~~l~~L~~L~Ls~N~i~-~l 193 (210)
T d1h6ta2 121 HNGIS-DI-NGLVHLPQLESLYLGNNKITDITVLS----RLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHIS-DL 193 (210)
T ss_dssp TSCCC-CC-GGGGGCTTCCEEECCSSCCCCCGGGG----GCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCC-BC
T ss_pred ccccc-cc-cccccccccccccccccccccccccc----ccccccccccccccccccccccCCCCCCEEECCCCCCC-CC
Confidence 99987 34 36888999999999999987432211 124566777777777654 45778888888888887 45
Q ss_pred ccccccCC
Q 009965 228 PKCLEYLP 235 (521)
Q Consensus 228 p~~l~~l~ 235 (521)
| .+..++
T Consensus 194 ~-~l~~l~ 200 (210)
T d1h6ta2 194 R-ALAGLK 200 (210)
T ss_dssp G-GGTTCT
T ss_pred h-hhcCCC
Confidence 5 344433
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.56 E-value=6e-15 Score=122.74 Aligned_cols=102 Identities=26% Similarity=0.302 Sum_probs=90.2
Q ss_pred EEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeeccccc
Q 009965 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNG 153 (521)
Q Consensus 74 ~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 153 (521)
.|+|++|+++. ++ .+..+++|++|++++|+|+ .+|..++.+++|++|++++|+|+. +| .+..+++|++|++++|+
T Consensus 2 ~L~Ls~n~l~~-l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N~ 76 (124)
T d1dcea3 2 VLHLAHKDLTV-LC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNR 76 (124)
T ss_dssp EEECTTSCCSS-CC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSC
T ss_pred EEEcCCCCCCC-Cc-ccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCCc
Confidence 68999999985 44 5899999999999999998 578889999999999999999984 55 59999999999999999
Q ss_pred CcccC-chhhhCCCCCCEEeCCCCCCCc
Q 009965 154 LTGRL-PAELGNLISLEELHLDRNRLQG 180 (521)
Q Consensus 154 l~g~~-p~~~~~l~~L~~L~Ls~N~l~g 180 (521)
++... ...+..+++|++|++++|+++.
T Consensus 77 i~~~~~~~~l~~~~~L~~L~l~~N~i~~ 104 (124)
T d1dcea3 77 LQQSAAIQPLVSCPRLVLLNLQGNSLCQ 104 (124)
T ss_dssp CCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred cCCCCCchhhcCCCCCCEEECCCCcCCc
Confidence 99433 2578999999999999999983
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.56 E-value=1e-14 Score=121.34 Aligned_cols=104 Identities=29% Similarity=0.357 Sum_probs=89.0
Q ss_pred CEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecccccCcccCchhhhCCCCCCEEeCCCC
Q 009965 97 QELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRN 176 (521)
Q Consensus 97 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 176 (521)
+.|+|++|+++ .+| .+..+++|++||+++|+|+ .+|+.++.+++|+.|++++|+++ .+| .++.+++|++|++++|
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~-~l~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVD-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCG-GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccc-ccC-ccccccccCeEECCCC
Confidence 58999999998 455 4899999999999999998 68889999999999999999999 455 5999999999999999
Q ss_pred CCCccCCCCCCCcccccccccccccCCcCcccCCCCCCEEeccCCcccc
Q 009965 177 RLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVG 225 (521)
Q Consensus 177 ~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g 225 (521)
+++ .+|.. ..+..+++|+.|++++|+++.
T Consensus 76 ~i~-~~~~~-------------------~~l~~~~~L~~L~l~~N~i~~ 104 (124)
T d1dcea3 76 RLQ-QSAAI-------------------QPLVSCPRLVLLNLQGNSLCQ 104 (124)
T ss_dssp CCC-SSSTT-------------------GGGGGCTTCCEEECTTSGGGG
T ss_pred ccC-CCCCc-------------------hhhcCCCCCCEEECCCCcCCc
Confidence 998 34421 124457889999999999874
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.52 E-value=3e-14 Score=128.98 Aligned_cols=161 Identities=24% Similarity=0.303 Sum_probs=126.5
Q ss_pred EEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecccccC
Q 009965 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGL 154 (521)
Q Consensus 75 L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 154 (521)
+.++.+.+++.++ ...+.+|++|++++|.++. ++ .+..+++|++|+|++|++++..| ++++++|++|++++|.+
T Consensus 23 ~~l~~~~~~~~~~--~~~l~~l~~L~l~~~~i~~-l~-~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~ 96 (199)
T d2omxa2 23 TVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQI 96 (199)
T ss_dssp HHTTCSSTTSEEC--HHHHTTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred HHhCCCCCCCccC--HHHhcCCCEEECCCCCCCC-cc-ccccCCCcCcCccccccccCccc--ccCCccccccccccccc
Confidence 3455566665433 3567899999999999984 43 58899999999999999996433 89999999999999999
Q ss_pred cccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCc---ccCCCCCCEEeccCCccccCCc-cc
Q 009965 155 TGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGSIP-KC 230 (521)
Q Consensus 155 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~---~~~l~~L~~L~ls~N~l~g~ip-~~ 230 (521)
. .+| .+.++++|+.|++++|.+....+-.. ...+..+++++|.+.. +..+++|+.|++++|++++..| ..
T Consensus 97 ~-~~~-~l~~l~~L~~L~l~~~~~~~~~~~~~----l~~L~~L~l~~n~l~~~~~l~~~~~L~~L~l~~n~l~~l~~l~~ 170 (199)
T d2omxa2 97 A-DIT-PLANLTNLTGLTLFNNQITDIDPLKN----LTNLNRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKPLAN 170 (199)
T ss_dssp C-CCG-GGTTCTTCSEEECCSSCCCCCGGGTT----CTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCCCCGGGTT
T ss_pred c-ccc-ccccccccccccccccccccccccch----hhhhHHhhhhhhhhcccccccccccccccccccccccCCccccC
Confidence 8 455 48999999999999999875332211 2467888999998865 4567899999999999985433 34
Q ss_pred cccCCCcccCCCcCCCC
Q 009965 231 LEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 231 l~~l~~l~~~~N~l~~~ 247 (521)
+.+|+.+++++|+++..
T Consensus 171 l~~L~~L~ls~N~i~~i 187 (199)
T d2omxa2 171 LTTLERLDISSNKVSDI 187 (199)
T ss_dssp CTTCCEEECCSSCCCCC
T ss_pred CCCCCEEECCCCCCCCC
Confidence 57788899999988764
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=1.4e-14 Score=126.41 Aligned_cols=87 Identities=21% Similarity=0.155 Sum_probs=52.3
Q ss_pred ccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecccccCcccCchhhhCCCCCC
Q 009965 90 LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLE 169 (521)
Q Consensus 90 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~ 169 (521)
+.+...|++|+|++|+|+. +|..+..+++|++|||++|+++ .++ .|..+++|++|+|++|+++...+..+..+++|+
T Consensus 14 ~~n~~~lr~L~L~~n~I~~-i~~~~~~l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~ 90 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 90 (162)
T ss_dssp EECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred ccCcCcCcEEECCCCCCCc-cCccccccccCCEEECCCCCCC-ccC-CcccCcchhhhhcccccccCCCccccccccccc
Confidence 4555566666666666663 3544555666666666666665 332 356666666666666666644444445566666
Q ss_pred EEeCCCCCCC
Q 009965 170 ELHLDRNRLQ 179 (521)
Q Consensus 170 ~L~Ls~N~l~ 179 (521)
.|+|++|+++
T Consensus 91 ~L~L~~N~i~ 100 (162)
T d1a9na_ 91 ELILTNNSLV 100 (162)
T ss_dssp EEECCSCCCC
T ss_pred cceecccccc
Confidence 6666666665
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.51 E-value=2.5e-14 Score=130.68 Aligned_cols=160 Identities=21% Similarity=0.316 Sum_probs=124.4
Q ss_pred EecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecccccCc
Q 009965 76 NISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLT 155 (521)
Q Consensus 76 ~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 155 (521)
++..+.+++.++. ..+.+|++|++++|.++.. + .+..+++|++|+|++|++++ ++ .++.+++|++|++++|+++
T Consensus 30 ~l~~~~~~~~~~~--~~L~~L~~L~l~~~~i~~l-~-~l~~l~~L~~L~L~~n~i~~-l~-~~~~l~~L~~L~l~~n~i~ 103 (210)
T d1h6ta2 30 NLKKKSVTDAVTQ--NELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTD-IK-PLANLKNLGWLFLDENKVK 103 (210)
T ss_dssp HTTCSCTTSEECH--HHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCC
T ss_pred HhCcCccCCccCH--HHhcCccEEECcCCCCCCc-h-hHhhCCCCCEEeCCCccccC-cc-ccccCcccccccccccccc
Confidence 4555666655443 3577899999999999854 3 48899999999999999996 44 4789999999999999999
Q ss_pred ccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCc---ccCCCCCCEEeccCCccccCCc-ccc
Q 009965 156 GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGSIP-KCL 231 (521)
Q Consensus 156 g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~---~~~l~~L~~L~ls~N~l~g~ip-~~l 231 (521)
.+| .+..+++|+.|++++|.+. .++... ....+..++++.|.++. +..+++|+.+++++|++++..| ..+
T Consensus 104 -~l~-~l~~l~~L~~L~l~~~~~~-~~~~l~---~l~~l~~l~~~~n~l~~~~~~~~l~~L~~l~l~~n~l~~i~~l~~l 177 (210)
T d1h6ta2 104 -DLS-SLKDLKKLKSLSLEHNGIS-DINGLV---HLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVPLAGL 177 (210)
T ss_dssp -CGG-GGTTCTTCCEEECTTSCCC-CCGGGG---GCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGGGTTC
T ss_pred -ccc-ccccccccccccccccccc-cccccc---ccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 465 5899999999999999987 343211 12356777888888765 3468899999999999985433 345
Q ss_pred ccCCCcccCCCcCCCC
Q 009965 232 EYLPSTSFQGNCLQNK 247 (521)
Q Consensus 232 ~~l~~l~~~~N~l~~~ 247 (521)
.+|+.|++++|+++..
T Consensus 178 ~~L~~L~Ls~N~i~~l 193 (210)
T d1h6ta2 178 TKLQNLYLSKNHISDL 193 (210)
T ss_dssp TTCCEEECCSSCCCBC
T ss_pred CCCCEEECCCCCCCCC
Confidence 6788899999988764
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.51 E-value=9.8e-15 Score=127.48 Aligned_cols=106 Identities=23% Similarity=0.234 Sum_probs=92.5
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|+|++|+|+. ++..+..+++|+.|+|++|+|+. ++ .|..+++|++|+|++|+++...+..+..+++|+.|+|
T Consensus 18 ~~lr~L~L~~n~I~~-i~~~~~~l~~L~~L~Ls~N~i~~-l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~L 94 (162)
T d1a9na_ 18 VRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRK-LD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELIL 94 (162)
T ss_dssp TSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCE-EC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEEC
T ss_pred CcCcEEECCCCCCCc-cCccccccccCCEEECCCCCCCc-cC-CcccCcchhhhhcccccccCCCcccccccccccccee
Confidence 368999999999987 46667889999999999999995 44 5899999999999999999655555678999999999
Q ss_pred ccccCcccCc--hhhhCCCCCCEEeCCCCCCC
Q 009965 150 QSNGLTGRLP--AELGNLISLEELHLDRNRLQ 179 (521)
Q Consensus 150 s~N~l~g~~p--~~~~~l~~L~~L~Ls~N~l~ 179 (521)
++|+++. ++ ..+..+++|++|++++|.++
T Consensus 95 ~~N~i~~-~~~l~~l~~l~~L~~L~l~~N~i~ 125 (162)
T d1a9na_ 95 TNNSLVE-LGDLDPLASLKSLTYLCILRNPVT 125 (162)
T ss_dssp CSCCCCC-GGGGGGGGGCTTCCEEECCSSGGG
T ss_pred ccccccc-cccccccccccccchhhcCCCccc
Confidence 9999984 44 46889999999999999997
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.51 E-value=1.5e-13 Score=132.78 Aligned_cols=170 Identities=20% Similarity=0.206 Sum_probs=116.0
Q ss_pred EEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeeccc
Q 009965 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151 (521)
Q Consensus 72 l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 151 (521)
.+.+|-++++++. +|+.+. +++++|+|++|+|+...+.+|.++++|++|++++|.+....|..|.++++|++|++++
T Consensus 12 ~~~~~C~~~~L~~-lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~ 88 (305)
T d1xkua_ 12 LRVVQCSDLGLEK-VPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 88 (305)
T ss_dssp TTEEECTTSCCCS-CCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCCc-cCCCCC--CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccC
Confidence 3568999999986 676663 7899999999999976667899999999999999999988889999999999999999
Q ss_pred ccCcccCchhhhCCCCCCEEeCCCCCCCccCCC---CC----------C--C---------cccccccccccccCCcCcc
Q 009965 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPA---GS----------N--S---------GYTANIHGMYASSANLTGL 207 (521)
Q Consensus 152 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~---~~----------~--~---------~~~~~l~~l~l~~n~l~~~ 207 (521)
|+++ .+|..+ ...|+.|+++.|.+.+..+. .. . . .....+..++++.|.++.+
T Consensus 89 n~l~-~l~~~~--~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~l 165 (305)
T d1xkua_ 89 NQLK-ELPEKM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTI 165 (305)
T ss_dssp SCCS-BCCSSC--CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSC
T ss_pred CccC-cCccch--hhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCcccc
Confidence 9998 566543 35677777777777632210 00 0 0 0001234455566655543
Q ss_pred c--CCCCCCEEeccCCccccCCcccccc---CCCcccCCCcCCCC
Q 009965 208 C--HLSQLKVADFSYNFFVGSIPKCLEY---LPSTSFQGNCLQNK 247 (521)
Q Consensus 208 ~--~l~~L~~L~ls~N~l~g~ip~~l~~---l~~l~~~~N~l~~~ 247 (521)
. -+++|+.|++++|..++..|..+.. +..+.+++|.+...
T Consensus 166 ~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~ 210 (305)
T d1xkua_ 166 PQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAV 210 (305)
T ss_dssp CSSCCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEE
T ss_pred CcccCCccCEEECCCCcCCCCChhHhhcccccccccccccccccc
Confidence 2 2455666666666666555544433 23345555555443
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.51 E-value=4.3e-14 Score=140.76 Aligned_cols=164 Identities=26% Similarity=0.349 Sum_probs=99.6
Q ss_pred CEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecc
Q 009965 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
++..+++++|.+++..| +...++|++|++++|+++. + +.+..+++|+.|++++|.+++..| +..+++|++|+++
T Consensus 198 ~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~ 271 (384)
T d2omza2 198 NLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLG 271 (384)
T ss_dssp TCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECC
T ss_pred ccceeeccCCccCCCCc--ccccCCCCEEECCCCCCCC-c-chhhcccccchhccccCccCCCCc--ccccccCCEeecc
Confidence 45667777777776433 4556677777777777763 2 356677777777777777765332 6667777777777
Q ss_pred cccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc---cCCCCCCEEeccCCccccCC
Q 009965 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGSI 227 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~---~~l~~L~~L~ls~N~l~g~i 227 (521)
+|++++.. .+..++.++.++++.|.+++ ++.. .....+..++++.|+++++ ..+++|+.|++++|++++ +
T Consensus 272 ~~~l~~~~--~~~~~~~l~~l~~~~n~l~~-~~~~---~~~~~l~~L~ls~n~l~~l~~l~~l~~L~~L~L~~n~l~~-l 344 (384)
T d2omza2 272 ANQISNIS--PLAGLTALTNLELNENQLED-ISPI---SNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFANNKVSD-V 344 (384)
T ss_dssp SSCCCCCG--GGTTCTTCSEEECCSSCCSC-CGGG---GGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCC-C
T ss_pred CcccCCCC--cccccccccccccccccccc-cccc---chhcccCeEECCCCCCCCCcccccCCCCCEEECCCCCCCC-C
Confidence 77776432 25666667777777776663 2210 1113455566666666553 446667777777776663 3
Q ss_pred c--cccccCCCcccCCCcCCCC
Q 009965 228 P--KCLEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 228 p--~~l~~l~~l~~~~N~l~~~ 247 (521)
| ..+.+|+.+++++|++++.
T Consensus 345 ~~l~~l~~L~~L~l~~N~l~~l 366 (384)
T d2omza2 345 SSLANLTNINWLSAGHNQISDL 366 (384)
T ss_dssp GGGGGCTTCCEEECCSSCCCBC
T ss_pred hhHcCCCCCCEEECCCCcCCCC
Confidence 3 1233455566667766654
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.50 E-value=1.1e-13 Score=127.93 Aligned_cols=165 Identities=23% Similarity=0.333 Sum_probs=129.7
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|++.+|+++. + +.+..+++|++|+|++|++++..| +..+++|++|++++|.++ .++ .+..+++|+.+++
T Consensus 41 ~~L~~L~l~~~~i~~-l-~~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~-~i~-~l~~l~~L~~l~l 114 (227)
T d1h6ua2 41 DGITTLSAFGTGVTT-I-EGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLK-NVS-AIAGLQSIKTLDL 114 (227)
T ss_dssp HTCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCS-CCG-GGTTCTTCCEEEC
T ss_pred CCcCEEECCCCCCCc-c-hhHhcCCCCcEeecCCceeecccc--cccccccccccccccccc-ccc-ccccccccccccc
Confidence 368999999999987 4 358999999999999999986544 899999999999999987 444 5888999999999
Q ss_pred ccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCc---ccCCCCCCEEeccCCccccC
Q 009965 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGS 226 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~---~~~l~~L~~L~ls~N~l~g~ 226 (521)
++|...+.. .+...+.++.++++.+.+....+.. ...++..++++.|.+.. +..+++|+.|++++|++++
T Consensus 115 ~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~L~~L~l~~n~~~~~~~l~~l~~L~~L~Ls~n~l~~- 187 (227)
T d1h6ua2 115 TSTQITDVT--PLAGLSNLQVLYLDLNQITNISPLA----GLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISD- 187 (227)
T ss_dssp TTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGGGG----GCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCC-
T ss_pred ccccccccc--hhccccchhhhhchhhhhchhhhhc----cccccccccccccccccchhhcccccceecccCCCccCC-
Confidence 999887533 3677888999999988887443321 12356777888887654 5678899999999999985
Q ss_pred Cc--cccccCCCcccCCCcCCCC
Q 009965 227 IP--KCLEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 227 ip--~~l~~l~~l~~~~N~l~~~ 247 (521)
+| ..+.+|+.|++++|+++..
T Consensus 188 l~~l~~l~~L~~L~Ls~N~lt~i 210 (227)
T d1h6ua2 188 ISPLASLPNLIEVHLKNNQISDV 210 (227)
T ss_dssp CGGGGGCTTCCEEECTTSCCCBC
T ss_pred ChhhcCCCCCCEEECcCCcCCCC
Confidence 44 3457778889999987764
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.48 E-value=7.7e-14 Score=130.07 Aligned_cols=188 Identities=12% Similarity=0.152 Sum_probs=114.7
Q ss_pred CCccceeeCCC---------CCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccC-CccccCCCCCcEEEcc-
Q 009965 58 CHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGII-PKELGLLKRLKILDLG- 126 (521)
Q Consensus 58 c~w~gv~C~~~---------~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls- 126 (521)
|....|.|... ...+++|+|++|.|+...+..|.++++|++|+|++|.+...+ +..|..++++++|++.
T Consensus 8 C~~~~i~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~ 87 (242)
T d1xwdc1 8 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 87 (242)
T ss_dssp ECSSEEEEESCSCSSCCSCSCSCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEEC
T ss_pred CcCCEEEEeCCCCCCcCCCCCCCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccc
Confidence 45666777521 236788888888888765667888888888888888877544 4467788888888875
Q ss_pred CCcCCCCCCcccCCCccCceeecccccCcccCch-hhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcC
Q 009965 127 TNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPA-ELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT 205 (521)
Q Consensus 127 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~ 205 (521)
.|++....+..|.++++|++|++++|++....+. .+..+..|..+..+++.+. .++...+......+..++++.|.++
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~-~i~~~~~~~~~~~l~~L~l~~n~l~ 166 (242)
T d1xwdc1 88 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIH-TIERNSFVGLSFESVILWLNKNGIQ 166 (242)
T ss_dssp CTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCC-EECTTSSTTSBSSCEEEECCSSCCC
T ss_pred cccccccccccccccccccccccchhhhcccccccccccccccccccccccccc-cccccccccccccceeeeccccccc
Confidence 4677767777788888888888888888743221 2233444445555555555 3443333323334445556666655
Q ss_pred cccC----CCCCCEE-eccCCccccCCcc-c---cccCCCcccCCCcCCCC
Q 009965 206 GLCH----LSQLKVA-DFSYNFFVGSIPK-C---LEYLPSTSFQGNCLQNK 247 (521)
Q Consensus 206 ~~~~----l~~L~~L-~ls~N~l~g~ip~-~---l~~l~~l~~~~N~l~~~ 247 (521)
.+.. ..+++.+ ++++|+++ .+|. . +.+|+.+++++|+++..
T Consensus 167 ~i~~~~~~~~~l~~~~~l~~n~l~-~l~~~~f~~l~~L~~L~Ls~N~l~~l 216 (242)
T d1xwdc1 167 EIHNCAFNGTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDISRTRIHSL 216 (242)
T ss_dssp EECTTTTTTCCEEEEECTTCTTCC-CCCTTTTTTSCCCSEEECTTSCCCCC
T ss_pred ccccccccchhhhccccccccccc-cccHHHhcCCCCCCEEECCCCcCCcc
Confidence 4322 2333333 34555665 3432 2 24455566666666654
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.43 E-value=3.7e-13 Score=116.46 Aligned_cols=103 Identities=23% Similarity=0.201 Sum_probs=85.4
Q ss_pred EEecCCCCCccCCccccCCCCCCEEECcCC-cccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeeccccc
Q 009965 75 INISGSSLKGFLAPELGLLTYLQELILHGN-NLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNG 153 (521)
Q Consensus 75 L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 153 (521)
++++++++.. .|..+..+++|++|++++| .++...+..|.++++|+.|+|++|+|+...|..|..+++|++|+|++|+
T Consensus 13 l~c~~~~~~~-~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~ 91 (156)
T d2ifga3 13 LRCTRDGALD-SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNA 91 (156)
T ss_dssp EECCSSCCCT-TTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSC
T ss_pred EEecCCCCcc-CcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCC
Confidence 3334555554 5777888999999999866 5887777889999999999999999998778889999999999999999
Q ss_pred CcccCchhhhCCCCCCEEeCCCCCCC
Q 009965 154 LTGRLPAELGNLISLEELHLDRNRLQ 179 (521)
Q Consensus 154 l~g~~p~~~~~l~~L~~L~Ls~N~l~ 179 (521)
|+ .+|.......+|+.|+|++|.+.
T Consensus 92 l~-~l~~~~~~~~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 92 LE-SLSWKTVQGLSLQELVLSGNPLH 116 (156)
T ss_dssp CS-CCCSTTTCSCCCCEEECCSSCCC
T ss_pred Cc-ccChhhhccccccccccCCCccc
Confidence 99 55555445558999999999885
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.39 E-value=1e-12 Score=130.62 Aligned_cols=161 Identities=23% Similarity=0.369 Sum_probs=114.4
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|++++|.++.. +.+..+++|+.|++++|.+++..| +..+++|++|++++|++++.. .+..++.++.+++
T Consensus 219 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~~~l~~~~--~~~~~~~l~~l~~ 292 (384)
T d2omza2 219 TNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNIS--PLAGLTALTNLEL 292 (384)
T ss_dssp TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCG--GGTTCTTCSEEEC
T ss_pred CCCCEEECCCCCCCCc--chhhcccccchhccccCccCCCCc--ccccccCCEeeccCcccCCCC--ccccccccccccc
Confidence 4677888888888762 357778888888888888876443 777888888888888887543 3667788888888
Q ss_pred ccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCc---ccCCCCCCEEeccCCccccC
Q 009965 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGS 226 (521)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~---~~~l~~L~~L~ls~N~l~g~ 226 (521)
+.|.+++ + ..+..+++++.|++++|++++..|-. ...++..+++++|.++. +..+++|++|++++|++++.
T Consensus 293 ~~n~l~~-~-~~~~~~~~l~~L~ls~n~l~~l~~l~----~l~~L~~L~L~~n~l~~l~~l~~l~~L~~L~l~~N~l~~l 366 (384)
T d2omza2 293 NENQLED-I-SPISNLKNLTYLTLYFNNISDISPVS----SLTKLQRLFFANNKVSDVSSLANLTNINWLSAGHNQISDL 366 (384)
T ss_dssp CSSCCSC-C-GGGGGCTTCSEEECCSSCCSCCGGGG----GCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCBC
T ss_pred ccccccc-c-cccchhcccCeEECCCCCCCCCcccc----cCCCCCEEECCCCCCCCChhHcCCCCCCEEECCCCcCCCC
Confidence 8888874 3 34777888888888888887543211 12467778888887664 45577888888888888865
Q ss_pred Cc-cccccCCCcccCCC
Q 009965 227 IP-KCLEYLPSTSFQGN 242 (521)
Q Consensus 227 ip-~~l~~l~~l~~~~N 242 (521)
.| ..+.+|+.|++++|
T Consensus 367 ~~l~~l~~L~~L~L~~N 383 (384)
T d2omza2 367 TPLANLTRITQLGLNDQ 383 (384)
T ss_dssp GGGTTCTTCSEEECCCE
T ss_pred hhhccCCCCCEeeCCCC
Confidence 54 23455566677665
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.36 E-value=2.5e-12 Score=118.48 Aligned_cols=166 Identities=20% Similarity=0.310 Sum_probs=126.0
Q ss_pred CccceeeCCCCCCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCccc
Q 009965 59 HWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI 138 (521)
Q Consensus 59 ~w~gv~C~~~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~ 138 (521)
.+.|+.. -.+++.|++++|.+++..| +..+++|++|++++|.++. ++ .+..+++|+++++++|...+. ..+
T Consensus 55 ~l~~l~~---l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~~-i~-~l~~l~~L~~l~l~~~~~~~~--~~~ 125 (227)
T d1h6ua2 55 TIEGVQY---LNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITDV--TPL 125 (227)
T ss_dssp CCTTGGG---CTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCCC--GGG
T ss_pred cchhHhc---CCCCcEeecCCceeecccc--ccccccccccccccccccc-cc-ccccccccccccccccccccc--chh
Confidence 4555443 4589999999999988543 8999999999999999984 44 588999999999999998754 346
Q ss_pred CCCccCceeecccccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcc---cCCCCCCE
Q 009965 139 GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKV 215 (521)
Q Consensus 139 ~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~---~~l~~L~~ 215 (521)
...+.++.+.++++.+.... .+.++++|+.|++++|.+++..+-.. ..++..+++++|.++++ ..+++|++
T Consensus 126 ~~~~~~~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~n~~~~~~~l~~----l~~L~~L~Ls~n~l~~l~~l~~l~~L~~ 199 (227)
T d1h6ua2 126 AGLSNLQVLYLDLNQITNIS--PLAGLTNLQYLSIGNAQVSDLTPLAN----LSKLTTLKADDNKISDISPLASLPNLIE 199 (227)
T ss_dssp TTCTTCCEEECCSSCCCCCG--GGGGCTTCCEEECCSSCCCCCGGGTT----CTTCCEEECCSSCCCCCGGGGGCTTCCE
T ss_pred ccccchhhhhchhhhhchhh--hhccccccccccccccccccchhhcc----cccceecccCCCccCCChhhcCCCCCCE
Confidence 67788999999999887433 37788899999999998874333111 24678889999888764 56899999
Q ss_pred EeccCCccccCCc-cccccCCCccc
Q 009965 216 ADFSYNFFVGSIP-KCLEYLPSTSF 239 (521)
Q Consensus 216 L~ls~N~l~g~ip-~~l~~l~~l~~ 239 (521)
|++++|+++...| ..+.+|..+++
T Consensus 200 L~Ls~N~lt~i~~l~~l~~L~~L~l 224 (227)
T d1h6ua2 200 VHLKNNQISDVSPLANTSNLFIVTL 224 (227)
T ss_dssp EECTTSCCCBCGGGTTCTTCCEEEE
T ss_pred EECcCCcCCCCcccccCCCCCEEEe
Confidence 9999999985333 23344444444
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.36 E-value=2.1e-12 Score=111.57 Aligned_cols=110 Identities=16% Similarity=0.047 Sum_probs=92.4
Q ss_pred CCCCCCEEECcCCcccccCCccccCCCCCcEEEccCC-cCCCCCCcccCCCccCceeecccccCcccCchhhhCCCCCCE
Q 009965 92 LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTN-QLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEE 170 (521)
Q Consensus 92 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 170 (521)
.....+.++.+++++. ..|..+..+++|+.|++++| .++...+..|.++++|+.|+|++|+|+...|.+|..+++|++
T Consensus 6 ~c~~~~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~ 84 (156)
T d2ifga3 6 CPHGSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSR 84 (156)
T ss_dssp CCSSSSCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCE
T ss_pred CcCCCCeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccc
Confidence 3445667999999988 57888999999999999766 588666778999999999999999999888899999999999
Q ss_pred EeCCCCCCCccCCCCCCCcccccccccccccCCcCcccCCCCCCEEeccCCccc
Q 009965 171 LHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFV 224 (521)
Q Consensus 171 L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~ 224 (521)
|+|++|+|+ .+|...+. ..+|+.|+|++|.+.
T Consensus 85 L~Ls~N~l~-~l~~~~~~---------------------~~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 85 LNLSFNALE-SLSWKTVQ---------------------GLSLQELVLSGNPLH 116 (156)
T ss_dssp EECCSSCCS-CCCSTTTC---------------------SCCCCEEECCSSCCC
T ss_pred eeccCCCCc-ccChhhhc---------------------cccccccccCCCccc
Confidence 999999998 67654322 125889999999885
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.26 E-value=1.6e-11 Score=113.85 Aligned_cols=171 Identities=16% Similarity=0.102 Sum_probs=120.5
Q ss_pred EEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCC-CcccCCCccCceeeccc
Q 009965 73 LKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI-PPEIGNLTGLVKINLQS 151 (521)
Q Consensus 73 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~-p~~~~~l~~L~~L~Ls~ 151 (521)
+.++.++++++. +|+.+. +++++|+|++|+|+...+..|.++++|++|+|++|.+...+ +..|.+++++++|++..
T Consensus 11 ~~i~c~~~~l~~-iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~ 87 (242)
T d1xwdc1 11 RVFLCQESKVTE-IPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 87 (242)
T ss_dssp SEEEEESCSCSS-CCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEEC
T ss_pred CEEEEeCCCCCC-cCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccc
Confidence 368889999984 776653 68999999999999766778999999999999999998655 45688999999999864
Q ss_pred -ccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCc-----ccCC-CCCCEEeccCCccc
Q 009965 152 -NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHL-SQLKVADFSYNFFV 224 (521)
Q Consensus 152 -N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~-----~~~l-~~L~~L~ls~N~l~ 224 (521)
|.+....+..|.++++|++|++++|.++. ++..........+.......+.+.. +..+ ..++.+++++|+++
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~-~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~ 166 (242)
T d1xwdc1 88 ANNLLYINPEAFQNLPNLQYLLISNTGIKH-LPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ 166 (242)
T ss_dssp CTTCCEECTTSEECCTTCCEEEEESCCCCS-CCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC
T ss_pred cccccccccccccccccccccccchhhhcc-cccccccccccccccccccccccccccccccccccccceeeeccccccc
Confidence 78887888889999999999999999984 4432211111222222333334433 2223 36888999999998
Q ss_pred cCCcccccc--CCC-cccCCCcCCCC
Q 009965 225 GSIPKCLEY--LPS-TSFQGNCLQNK 247 (521)
Q Consensus 225 g~ip~~l~~--l~~-l~~~~N~l~~~ 247 (521)
...+..+.. +.. +.+.+|.++..
T Consensus 167 ~i~~~~~~~~~l~~~~~l~~n~l~~l 192 (242)
T d1xwdc1 167 EIHNCAFNGTQLDELNLSDNNNLEEL 192 (242)
T ss_dssp EECTTTTTTCCEEEEECTTCTTCCCC
T ss_pred ccccccccchhhhccccccccccccc
Confidence 433333322 122 34566666654
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.23 E-value=6.3e-14 Score=126.55 Aligned_cols=116 Identities=22% Similarity=0.288 Sum_probs=87.0
Q ss_pred CCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecccccCcccCchhhhCC
Q 009965 86 LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNL 165 (521)
Q Consensus 86 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 165 (521)
++..+..|++|++|+|++|+|+. ++ .+..+++|++|+|++|+++ .+|..+..+++|+.|++++|+++. + +.+..+
T Consensus 40 l~~sl~~L~~L~~L~Ls~n~I~~-i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l-~~~~~l 114 (198)
T d1m9la_ 40 MDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-L-SGIEKL 114 (198)
T ss_dssp CHHHHHHTTTCCEEECSEEEESC-CC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-H-HHHHHH
T ss_pred hhhHHhcccccceeECcccCCCC-cc-cccCCccccChhhcccccc-cccccccccccccccccccccccc-c-cccccc
Confidence 45678888889999999888884 44 4888888999999988887 567666666788889999888884 4 347788
Q ss_pred CCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCcCcccCCCCCCEEeccCCccccC
Q 009965 166 ISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGS 226 (521)
Q Consensus 166 ~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l~g~ 226 (521)
++|+.|+|++|+++. ++. +..+..+++|+.|++++|++...
T Consensus 115 ~~L~~L~L~~N~i~~-~~~-------------------~~~l~~l~~L~~L~L~~N~l~~~ 155 (198)
T d1m9la_ 115 VNLRVLYMSNNKITN-WGE-------------------IDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp HHSSEEEESEEECCC-HHH-------------------HHHHTTTTTCSEEEECSSHHHHH
T ss_pred ccccccccccchhcc-ccc-------------------cccccCCCccceeecCCCccccC
Confidence 888899998888862 211 01244577888888888887643
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.20 E-value=1e-13 Score=125.11 Aligned_cols=109 Identities=22% Similarity=0.244 Sum_probs=93.0
Q ss_pred CCEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeec
Q 009965 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (521)
.+++.|+|++|.|+. ++ .+..+++|++|+|++|.|+ .+|..+..+++|++|++++|+++. + +.+..+++|+.|+|
T Consensus 48 ~~L~~L~Ls~n~I~~-i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l-~~~~~l~~L~~L~L 122 (198)
T d1m9la_ 48 KACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-L-SGIEKLVNLRVLYM 122 (198)
T ss_dssp TTCCEEECSEEEESC-CC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-H-HHHHHHHHSSEEEE
T ss_pred cccceeECcccCCCC-cc-cccCCccccChhhcccccc-cccccccccccccccccccccccc-c-cccccccccccccc
Confidence 479999999999986 44 5999999999999999998 567666667789999999999984 4 35888999999999
Q ss_pred ccccCcccCc--hhhhCCCCCCEEeCCCCCCCccCCC
Q 009965 150 QSNGLTGRLP--AELGNLISLEELHLDRNRLQGAVPA 184 (521)
Q Consensus 150 s~N~l~g~~p--~~~~~l~~L~~L~Ls~N~l~g~~p~ 184 (521)
++|+++. ++ ..+..+++|++|+|++|.++...+.
T Consensus 123 ~~N~i~~-~~~~~~l~~l~~L~~L~L~~N~l~~~~~~ 158 (198)
T d1m9la_ 123 SNNKITN-WGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp SEEECCC-HHHHHHHTTTTTCSEEEECSSHHHHHHCT
T ss_pred ccchhcc-ccccccccCCCccceeecCCCccccCccc
Confidence 9999984 44 4689999999999999998855443
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.20 E-value=1.8e-10 Score=112.22 Aligned_cols=38 Identities=18% Similarity=0.098 Sum_probs=31.6
Q ss_pred CCCCCEEeccCCccccCCccccccCCCcccCCCcCCCCC
Q 009965 210 LSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNKD 248 (521)
Q Consensus 210 l~~L~~L~ls~N~l~g~ip~~l~~l~~l~~~~N~l~~~~ 248 (521)
+++|++|++++|+++ .+|..+.+|+.|++++|.++...
T Consensus 283 ~~~L~~L~Ls~N~l~-~lp~~~~~L~~L~L~~N~L~~l~ 320 (353)
T d1jl5a_ 283 PPSLEELNVSNNKLI-ELPALPPRLERLIASFNHLAEVP 320 (353)
T ss_dssp CTTCCEEECCSSCCS-CCCCCCTTCCEEECCSSCCSCCC
T ss_pred CCCCCEEECCCCccC-ccccccCCCCEEECCCCcCCccc
Confidence 367999999999988 78888888999999999887653
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.10 E-value=7e-10 Score=107.96 Aligned_cols=134 Identities=22% Similarity=0.260 Sum_probs=100.1
Q ss_pred CEEEEEecCCCCCccCCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecc
Q 009965 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (521)
+++.|||++++|+. +|+. +++|++|+|++|+|+ .+|..+ .+|+.|++++|+++ .++.- .+.|++|+++
T Consensus 39 ~l~~LdLs~~~L~~-lp~~---~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~-~l~~l---p~~L~~L~L~ 106 (353)
T d1jl5a_ 39 QAHELELNNLGLSS-LPEL---PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLK-ALSDL---PPLLEYLGVS 106 (353)
T ss_dssp TCSEEECTTSCCSC-CCSC---CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCS-CCCSC---CTTCCEEECC
T ss_pred CCCEEEeCCCCCCC-CCCC---CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccc-hhhhh---cccccccccc
Confidence 57889999999986 6753 578999999999999 678654 57999999999998 45431 2469999999
Q ss_pred cccCcccCchhhhCCCCCCEEeCCCCCCCccCCCCCCCcccccccccccccCCc---CcccCCCCCCEEeccCCccc
Q 009965 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANL---TGLCHLSQLKVADFSYNFFV 224 (521)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l---~~~~~l~~L~~L~ls~N~l~ 224 (521)
+|.++ .+|. ++.+++|+.|++++|.++. .|... ..+..+.+..+.. ..+..++.++.+++++|.+.
T Consensus 107 ~n~l~-~lp~-~~~l~~L~~L~l~~~~~~~-~~~~~-----~~l~~l~~~~~~~~~~~~l~~l~~l~~L~l~~n~~~ 175 (353)
T d1jl5a_ 107 NNQLE-KLPE-LQNSSFLKIIDVDNNSLKK-LPDLP-----PSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLK 175 (353)
T ss_dssp SSCCS-SCCC-CTTCTTCCEEECCSSCCSC-CCCCC-----TTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCS
T ss_pred ccccc-cccc-hhhhccceeeccccccccc-ccccc-----ccccchhhccccccccccccccccceeccccccccc
Confidence 99999 6774 6889999999999999984 33321 1222233333222 33556778888999888876
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.90 E-value=1.8e-10 Score=109.60 Aligned_cols=171 Identities=20% Similarity=0.164 Sum_probs=113.4
Q ss_pred CCEEEEEecCCCCCcc-CCccccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCC-cCCCC-CCcccCCCccCce
Q 009965 70 DRVLKINISGSSLKGF-LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTN-QLTGP-IPPEIGNLTGLVK 146 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~g~-~p~~~~~l~~L~~ 146 (521)
.++++|||+++.++.. ++..+..+++|++|+|+++.++...+..+..+++|++|+|+++ .++.. +..-..++++|++
T Consensus 46 ~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~ 125 (284)
T d2astb2 46 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 125 (284)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccc
Confidence 4789999999888753 3445788999999999999998888888999999999999985 55421 2222456789999
Q ss_pred eecccc-cCcc-cCchhhhC-CCCCCEEeCCCC--CCCcc-CCCCCCCcccccccccccccCC-cC-----cccCCCCCC
Q 009965 147 INLQSN-GLTG-RLPAELGN-LISLEELHLDRN--RLQGA-VPAGSNSGYTANIHGMYASSAN-LT-----GLCHLSQLK 214 (521)
Q Consensus 147 L~Ls~N-~l~g-~~p~~~~~-l~~L~~L~Ls~N--~l~g~-~p~~~~~~~~~~l~~l~l~~n~-l~-----~~~~l~~L~ 214 (521)
|+++++ .++. .++..+.. .++|+.|++++. .++.. +.. . ....+++..++++++. ++ .+..+++|+
T Consensus 126 L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~-l-~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~ 203 (284)
T d2astb2 126 LNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLST-L-VRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQ 203 (284)
T ss_dssp EECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHH-H-HHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCC
T ss_pred cccccccccccccchhhhcccccccchhhhcccccccccccccc-c-ccccccccccccccccCCCchhhhhhcccCcCC
Confidence 999985 4542 22333433 468999998864 23321 100 0 0012356677777643 33 355678899
Q ss_pred EEeccC-CccccCCcccc---ccCCCcccCCC
Q 009965 215 VADFSY-NFFVGSIPKCL---EYLPSTSFQGN 242 (521)
Q Consensus 215 ~L~ls~-N~l~g~ip~~l---~~l~~l~~~~N 242 (521)
+|++++ +.++......+ .+|+.+++.++
T Consensus 204 ~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 204 HLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp EEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred EEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 999998 46665544444 34555667665
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=98.75 E-value=4.3e-10 Score=109.96 Aligned_cols=177 Identities=18% Similarity=0.148 Sum_probs=106.4
Q ss_pred CCEEEEEecCCCCCcc----CCccccCCCCCCEEECcCCcccccCCc-------------cccCCCCCcEEEccCCcCCC
Q 009965 70 DRVLKINISGSSLKGF----LAPELGLLTYLQELILHGNNLIGIIPK-------------ELGLLKRLKILDLGTNQLTG 132 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~p~-------------~~~~l~~L~~L~Ls~N~l~g 132 (521)
.+++.|+|++|.++.. +...+...++|++|++++|.+...-.. .....+.|+.|++++|+++.
T Consensus 93 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~ 172 (344)
T d2ca6a1 93 PKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLEN 172 (344)
T ss_dssp TTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTG
T ss_pred CCcccccccccccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccc
Confidence 3677788888877653 233445667788888888776421100 11345677777877777652
Q ss_pred C----CCcccCCCccCceeecccccCccc-----CchhhhCCCCCCEEeCCCCCCCccCCCCCC--Cccccccccccccc
Q 009965 133 P----IPPEIGNLTGLVKINLQSNGLTGR-----LPAELGNLISLEELHLDRNRLQGAVPAGSN--SGYTANIHGMYASS 201 (521)
Q Consensus 133 ~----~p~~~~~l~~L~~L~Ls~N~l~g~-----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~~~~~~l~~l~l~~ 201 (521)
. +...+...+.|+.|+|++|+++.. +...+..+++|+.|+|++|.++..-..... .....++..+++++
T Consensus 173 ~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~ 252 (344)
T d2ca6a1 173 GSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLND 252 (344)
T ss_dssp GGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTT
T ss_pred cccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhc
Confidence 1 222344567788888888887631 233456678888888888877532100000 00123566778888
Q ss_pred CCcCc---------c--cCCCCCCEEeccCCccccC----Cccc----cccCCCcccCCCcCCC
Q 009965 202 ANLTG---------L--CHLSQLKVADFSYNFFVGS----IPKC----LEYLPSTSFQGNCLQN 246 (521)
Q Consensus 202 n~l~~---------~--~~l~~L~~L~ls~N~l~g~----ip~~----l~~l~~l~~~~N~l~~ 246 (521)
|.++. + .....|+.||+++|+++.. +... ...++.+++++|++..
T Consensus 253 n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 253 CLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 316 (344)
T ss_dssp CCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred CccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCC
Confidence 87753 1 1235688888888887532 2222 3457778888887765
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.66 E-value=1.8e-09 Score=102.50 Aligned_cols=153 Identities=20% Similarity=0.163 Sum_probs=105.3
Q ss_pred ccCCCCCCEEECcCCccccc-CCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecccc-cCccc-CchhhhCCC
Q 009965 90 LGLLTYLQELILHGNNLIGI-IPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN-GLTGR-LPAELGNLI 166 (521)
Q Consensus 90 l~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N-~l~g~-~p~~~~~l~ 166 (521)
......|++|||+++.++.. ++..+..+++|++|+|+++.+++..+..++.+++|++|+|+++ .++.. +..-+.+++
T Consensus 42 ~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~ 121 (284)
T d2astb2 42 HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCS 121 (284)
T ss_dssp CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCT
T ss_pred hccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHH
Confidence 34567899999999998754 4555788999999999999998888888999999999999995 56632 333356789
Q ss_pred CCCEEeCCCC-CCCccCCCCCCCcccccccccccccC--CcCc------ccCCCCCCEEeccCC-ccccCCccccc---c
Q 009965 167 SLEELHLDRN-RLQGAVPAGSNSGYTANIHGMYASSA--NLTG------LCHLSQLKVADFSYN-FFVGSIPKCLE---Y 233 (521)
Q Consensus 167 ~L~~L~Ls~N-~l~g~~p~~~~~~~~~~l~~l~l~~n--~l~~------~~~l~~L~~L~ls~N-~l~g~ip~~l~---~ 233 (521)
+|++|+++++ .++...-..........+..+++++. .++. ...+++|++|++++| .+++..+..+. +
T Consensus 122 ~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~ 201 (284)
T d2astb2 122 RLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNY 201 (284)
T ss_dssp TCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTT
T ss_pred hccccccccccccccccchhhhcccccccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhcccCc
Confidence 9999999985 45421100000001134566666643 2322 234789999999986 46766665554 4
Q ss_pred CCCcccCCC
Q 009965 234 LPSTSFQGN 242 (521)
Q Consensus 234 l~~l~~~~N 242 (521)
|+.++++++
T Consensus 202 L~~L~L~~C 210 (284)
T d2astb2 202 LQHLSLSRC 210 (284)
T ss_dssp CCEEECTTC
T ss_pred CCEEECCCC
Confidence 556677663
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=98.60 E-value=2.3e-09 Score=104.62 Aligned_cols=156 Identities=15% Similarity=0.112 Sum_probs=112.7
Q ss_pred CCEEEEEecCCCCCccCCc-------------cccCCCCCCEEECcCCccccc----CCccccCCCCCcEEEccCCcCCC
Q 009965 70 DRVLKINISGSSLKGFLAP-------------ELGLLTYLQELILHGNNLIGI----IPKELGLLKRLKILDLGTNQLTG 132 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~~~p~-------------~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g 132 (521)
.+++.|++++|.+...-.. .....+.|+.|++++|+++.. +...+...+.|+.|+|++|+++.
T Consensus 121 ~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~ 200 (344)
T d2ca6a1 121 TPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRP 200 (344)
T ss_dssp TTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCH
T ss_pred ccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchhhhhhhhcccccccccccc
Confidence 4789999999987531111 123567899999999988632 33445678899999999999863
Q ss_pred C-----CCcccCCCccCceeecccccCccc----CchhhhCCCCCCEEeCCCCCCCccCCCCCC----Cccccccccccc
Q 009965 133 P-----IPPEIGNLTGLVKINLQSNGLTGR----LPAELGNLISLEELHLDRNRLQGAVPAGSN----SGYTANIHGMYA 199 (521)
Q Consensus 133 ~-----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~----~~~~~~l~~l~l 199 (521)
. +...+..+++|+.|+|++|.++.. +...+..+++|++|+|++|.+++.-..... ......+..+++
T Consensus 201 ~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~l 280 (344)
T d2ca6a1 201 EGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRL 280 (344)
T ss_dssp HHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEEC
T ss_pred cccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEEC
Confidence 2 334567789999999999998733 455677899999999999998743111000 001135778999
Q ss_pred ccCCcCc---------c-cCCCCCCEEeccCCcccc
Q 009965 200 SSANLTG---------L-CHLSQLKVADFSYNFFVG 225 (521)
Q Consensus 200 ~~n~l~~---------~-~~l~~L~~L~ls~N~l~g 225 (521)
++|+++. + .+.++|+.|++++|.|..
T Consensus 281 s~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 281 QYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 316 (344)
T ss_dssp CSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred CCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCC
Confidence 9998863 2 246889999999999964
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.44 E-value=1.5e-08 Score=101.73 Aligned_cols=110 Identities=29% Similarity=0.310 Sum_probs=86.6
Q ss_pred CEEEEEecCCCCCccC-CccccCCCCCCEEECcCCcccc----cCCccccCCCCCcEEEccCCcCCCC----CCcccC-C
Q 009965 71 RVLKINISGSSLKGFL-APELGLLTYLQELILHGNNLIG----IIPKELGLLKRLKILDLGTNQLTGP----IPPEIG-N 140 (521)
Q Consensus 71 ~l~~L~L~~n~l~~~~-p~~l~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~-~ 140 (521)
+|+.||+++|++++.- ..-+..+++|+.|+|++|.++. .+...+..+++|++|||++|.|+.. +...+. .
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence 6899999999998632 3346678999999999999873 3456678899999999999998521 222332 2
Q ss_pred CccCceeecccccCccc----CchhhhCCCCCCEEeCCCCCCCc
Q 009965 141 LTGLVKINLQSNGLTGR----LPAELGNLISLEELHLDRNRLQG 180 (521)
Q Consensus 141 l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g 180 (521)
..+|++|+|++|+++.. ++..+..+++|++|+|++|.++.
T Consensus 83 ~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~ 126 (460)
T d1z7xw1 83 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGD 126 (460)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHH
T ss_pred CCCCCEEECCCCCccccccccccchhhccccccccccccccchh
Confidence 35799999999999853 46678889999999999999863
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.32 E-value=1.5e-06 Score=80.32 Aligned_cols=147 Identities=16% Similarity=0.072 Sum_probs=93.9
Q ss_pred HHHHHHhhhh-chhCcCC-CeeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC-CCCccceeeEEecC
Q 009965 354 ELEVACEDFS-NIIGSSP-DSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRES 430 (521)
Q Consensus 354 ~l~~~~~~~~-~~ig~G~-~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~ 430 (521)
|+.+....+. ....+|. .+.||+... +++.+.+|+....... ....+.+|...+..+. +--+.+++.++.++
T Consensus 8 ~l~~~~~~~~~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~----~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~ 82 (263)
T d1j7la_ 8 ELKKLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKG----TTYDVEREKDMMLWLEGKLPVPKVLHFERHD 82 (263)
T ss_dssp HHHHHHTTSEEEECSCCCSSSEEEEEEC-SSCEEEEEEECGGGTT----STTCHHHHHHHHHHHTTTSCCCCEEEEEEET
T ss_pred HHHHhhhceEEEEcCCCCCCCcEEEEEe-CCCeEEEEEcCCCccc----chhhHHHHHHHHHHHhccCCCCcEEEEEecC
Confidence 3444444443 2223344 468999865 4456777776432211 1224677888877663 43356777777766
Q ss_pred CCCceEEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC----------------------------
Q 009965 431 SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL---------------------------- 482 (521)
Q Consensus 431 ~~~~~~lv~ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~---------------------------- 482 (521)
+ ..++|||++++.++.+..... ....+++.++++.++.||+..
T Consensus 83 ~--~~~lv~~~l~G~~~~~~~~~~-------~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (263)
T d1j7la_ 83 G--WSNLLMSEADGVLCSEEYEDE-------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADV 153 (263)
T ss_dssp T--EEEEEEECCSSEEHHHHTTTC-------SCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCC
T ss_pred C--ceEEEEEeccccccccccccc-------ccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhh
Confidence 5 789999999998876654211 123345666777777777532
Q ss_pred ----------------------------CCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 483 ----------------------------GPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 483 ----------------------------~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
.+.++|+|+.|.|||++++...-|.||+.+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T d1j7la_ 154 DCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp CGGGGSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred hhhcccccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence 02378999999999999877777999987764
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.32 E-value=1.1e-08 Score=88.13 Aligned_cols=91 Identities=22% Similarity=0.145 Sum_probs=59.7
Q ss_pred ccCCCCCCEEECcCCcccccCCccccCCCCCcEEEccCCcCCCC--CCcccCCCccCceeecccccCcccCchhhhCCCC
Q 009965 90 LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP--IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLIS 167 (521)
Q Consensus 90 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~--~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~ 167 (521)
+..+..+..+++.+|... .++..+..+++|++|+|++|+|+.. ++..+..+++|+.|+|++|.++...+-.+....+
T Consensus 38 l~~~~~~~~l~~~~~~~~-~l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~ 116 (162)
T d1koha1 38 LVAQNIDVVLNRRSSMAA-TLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLK 116 (162)
T ss_dssp TTTTTCCCCTTSHHHHHH-HHHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCC
T ss_pred hhhccchhhcchhhhHhh-hhHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccc
Confidence 444444555555544433 4455556778888888888888743 2344667888888888888888443334445567
Q ss_pred CCEEeCCCCCCCcc
Q 009965 168 LEELHLDRNRLQGA 181 (521)
Q Consensus 168 L~~L~Ls~N~l~g~ 181 (521)
|+.|++++|.++..
T Consensus 117 L~~L~L~~Npl~~~ 130 (162)
T d1koha1 117 LEELWLDGNSLSDT 130 (162)
T ss_dssp CSSCCCTTSTTSSS
T ss_pred cceeecCCCCcCcC
Confidence 88888888888743
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.30 E-value=6.6e-08 Score=83.20 Aligned_cols=87 Identities=22% Similarity=0.155 Sum_probs=67.4
Q ss_pred CCccccCCCCCCEEECcCCccccc--CCccccCCCCCcEEEccCCcCCCCCCcccCCCccCceeecccccCcccCch---
Q 009965 86 LAPELGLLTYLQELILHGNNLIGI--IPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPA--- 160 (521)
Q Consensus 86 ~p~~l~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~--- 160 (521)
++..+..++.|++|+|++|+|+.. ++..+..+++|+.|||++|.++..-+-.+....+|+.|+|++|.++.....
T Consensus 57 l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~ 136 (162)
T d1koha1 57 LRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQST 136 (162)
T ss_dssp HHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHH
T ss_pred hHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchh
Confidence 344456789999999999999864 345577899999999999999843332344456799999999999866543
Q ss_pred ----hhhCCCCCCEEe
Q 009965 161 ----ELGNLISLEELH 172 (521)
Q Consensus 161 ----~~~~l~~L~~L~ 172 (521)
.+..+|+|+.||
T Consensus 137 y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 137 YISAIRERFPKLLRLD 152 (162)
T ss_dssp HHHHHHTTSTTCCEET
T ss_pred HHHHHHHHCCCCCEEC
Confidence 366789999886
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.22 E-value=2.4e-08 Score=100.23 Aligned_cols=175 Identities=17% Similarity=0.126 Sum_probs=101.3
Q ss_pred CCEEEEEecCCCCCc-----cCCccccCCCCCCEEECcCCccccc----CCccccCCCCCcEEEccCCcCCCCCCcc---
Q 009965 70 DRVLKINISGSSLKG-----FLAPELGLLTYLQELILHGNNLIGI----IPKELGLLKRLKILDLGTNQLTGPIPPE--- 137 (521)
Q Consensus 70 ~~l~~L~L~~n~l~~-----~~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~--- 137 (521)
..++.+++++|.+.. ..+........|+.|++++|.+... ....+...+.++.+++++|.++......
T Consensus 226 ~~~~~l~~~~n~~~~~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~ 305 (460)
T d1z7xw1 226 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 305 (460)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred ccccccchhhccccccccchhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhc
Confidence 356677777776542 2233344566788888888877633 2233456677888888888765221111
Q ss_pred -c-CCCccCceeecccccCcccCch----hhhCCCCCCEEeCCCCCCCcc----CCCCCCCcccccccccccccCCcCc-
Q 009965 138 -I-GNLTGLVKINLQSNGLTGRLPA----ELGNLISLEELHLDRNRLQGA----VPAGSNSGYTANIHGMYASSANLTG- 206 (521)
Q Consensus 138 -~-~~l~~L~~L~Ls~N~l~g~~p~----~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~~~~~~l~~l~l~~n~l~~- 206 (521)
+ .....|+.+++++|.++..-.. .+...++|++|+|++|++++. ++..... ....+..+++++|.++.
T Consensus 306 ~l~~~~~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~-~~~~L~~L~Ls~n~i~~~ 384 (460)
T d1z7xw1 306 TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQ-PGSVLRVLWLADCDVSDS 384 (460)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTS-TTCCCCEEECTTSCCCHH
T ss_pred cccccccccccccccccchhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhc-ccCCCCEEECCCCCCChH
Confidence 1 2335677888888877644322 234456788888888877532 1110000 01235566777777653
Q ss_pred --------ccCCCCCCEEeccCCccccCCcccc--------ccCCCcccCCCcCC
Q 009965 207 --------LCHLSQLKVADFSYNFFVGSIPKCL--------EYLPSTSFQGNCLQ 245 (521)
Q Consensus 207 --------~~~l~~L~~L~ls~N~l~g~ip~~l--------~~l~~l~~~~N~l~ 245 (521)
+...++|++|||++|+++......+ ..|+.+.+.+|.+.
T Consensus 385 ~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~l~l~~~~~~ 439 (460)
T d1z7xw1 385 SCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWS 439 (460)
T ss_dssp HHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCC
T ss_pred HHHHHHHHHhcCCCCCEEECCCCcCCHHHHHHHHHHHHhCCCccCEEECCCCCCC
Confidence 3346788888888888864322221 24566667666544
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=98.15 E-value=3.3e-06 Score=77.58 Aligned_cols=131 Identities=14% Similarity=0.070 Sum_probs=83.0
Q ss_pred hhCcCCC-eeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccC--CCCccceeeEEecCCCCceEEEEec
Q 009965 365 IIGSSPD-SLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN--HENTGKLLGYCRESSPFTRMLVFDY 441 (521)
Q Consensus 365 ~ig~G~~-g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~--H~niv~l~g~~~~~~~~~~~lv~ey 441 (521)
.+..|.. +.||+....++..+.+|...... ...+..|...+..+. .-.+.++++++.+.+ ..++||||
T Consensus 17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~-------~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~--~~~~v~~~ 87 (255)
T d1nd4a_ 17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA-------LNELQDEAARLSWLATTGVPCAAVLDVVTEAG--RDWLLLGE 87 (255)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSCT-------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSS--CEEEEEEC
T ss_pred EcCCcccCCeEEEEEeCCCCEEEEEeCCccC-------HhHHHHHHHHHHHHHhcCCCCCceeeeccccc--ceEEEEEe
Confidence 3445543 67999998888888888753221 123567777777663 333566777777665 78999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc-----------------------------------------
Q 009965 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT----------------------------------------- 480 (521)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~----------------------------------------- 480 (521)
+++-++.+.. .. ...++.++++.|+-||+
T Consensus 88 i~G~~~~~~~-------~~---~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (255)
T d1nd4a_ 88 VPGQDLLSSH-------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLA 157 (255)
T ss_dssp CSSEETTTSC-------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCC
T ss_pred eecccccccc-------cc---HHHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhH
Confidence 9876654321 00 11122233333333332
Q ss_pred ----------CC----CCCeEecCCCCCCeeecCCCCeeeCCCchhhh
Q 009965 481 ----------EL----GPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514 (521)
Q Consensus 481 ----------~~----~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~~ 514 (521)
.. .+.++|+|+.|.|||++++..+-|.||+.+..
T Consensus 158 ~~~~~~~l~~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~~ 205 (255)
T d1nd4a_ 158 PAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 205 (255)
T ss_dssp HHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHhCCccCCceEEeCCCCCcceEEeCCceEEEEEchhccc
Confidence 11 12489999999999999877778999998764
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.66 E-value=7.2e-06 Score=70.32 Aligned_cols=109 Identities=11% Similarity=0.091 Sum_probs=73.0
Q ss_pred CCEEEEEecCC-CCCcc----CCccccCCCCCCEEECcCCccccc----CCccccCCCCCcEEEccCCcCCCC----CCc
Q 009965 70 DRVLKINISGS-SLKGF----LAPELGLLTYLQELILHGNNLIGI----IPKELGLLKRLKILDLGTNQLTGP----IPP 136 (521)
Q Consensus 70 ~~l~~L~L~~n-~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~ 136 (521)
+.++.|+|+++ .++.. +-..+...+.|++|+|++|.+... +...+...+.|+.|+|++|.++.. +-.
T Consensus 15 ~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~ 94 (167)
T d1pgva_ 15 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 94 (167)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHH
Confidence 56888999874 45431 333566778899999999888632 223345567889999999987632 123
Q ss_pred ccCCCccCceeecccccCccc-------CchhhhCCCCCCEEeCCCCCC
Q 009965 137 EIGNLTGLVKINLQSNGLTGR-------LPAELGNLISLEELHLDRNRL 178 (521)
Q Consensus 137 ~~~~l~~L~~L~Ls~N~l~g~-------~p~~~~~l~~L~~L~Ls~N~l 178 (521)
.+...+.|++|+|++|.+... +...+..-++|+.|+++.+..
T Consensus 95 aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~~~ 143 (167)
T d1pgva_ 95 STLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 143 (167)
T ss_dssp HTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCCCc
Confidence 455667888999988866521 334455568888888876643
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=97.57 E-value=0.00013 Score=71.28 Aligned_cols=78 Identities=14% Similarity=0.063 Sum_probs=46.4
Q ss_pred chhCcCCCeeEEEEEeCC-CCEEEEEEeeeec----cccchhhHHHHHHHHHHHhcc-CC--CCccceeeEEecCCCCce
Q 009965 364 NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKE----EHWTGYLELYFQREVADLARI-NH--ENTGKLLGYCRESSPFTR 435 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~-~~~vavk~~~~~~----~~~~~~~~~~~~~E~~~l~~l-~H--~niv~l~g~~~~~~~~~~ 435 (521)
+.||.|....||+....+ ++.++||.-.... +.+.. ...+...|.+.+..+ .+ ..+.+++.+.. . ..
T Consensus 32 ~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~-~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d~--~--~~ 106 (392)
T d2pula1 32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPL-TIDRARIESSALIRQGEHVPHLVPRVFYSDT--E--MA 106 (392)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCC-CTTHHHHHHHHHHHHHTTCGGGSCCEEEEET--T--TT
T ss_pred EEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCC-CHHHHHHHHHHHHHhhhhCCCCcceEEEEcC--C--CC
Confidence 568999999999998864 6788888643211 11111 112345677777665 23 33555555543 3 45
Q ss_pred EEEEecCCCCC
Q 009965 436 MLVFDYASNGT 446 (521)
Q Consensus 436 ~lv~ey~~~gs 446 (521)
++||||+++..
T Consensus 107 ~lvmE~L~~~~ 117 (392)
T d2pula1 107 VTVMEDLSHLK 117 (392)
T ss_dssp EEEECCCTTSE
T ss_pred EEEEeccCCcc
Confidence 89999997643
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.33 E-value=5.4e-05 Score=64.63 Aligned_cols=89 Identities=19% Similarity=0.114 Sum_probs=66.1
Q ss_pred cCCCCCCEEECcCC-ccccc----CCccccCCCCCcEEEccCCcCCC----CCCcccCCCccCceeecccccCccc----
Q 009965 91 GLLTYLQELILHGN-NLIGI----IPKELGLLKRLKILDLGTNQLTG----PIPPEIGNLTGLVKINLQSNGLTGR---- 157 (521)
Q Consensus 91 ~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~---- 157 (521)
.+.+.|++|+|+++ .++.. +-..+...++|+.|+|++|.+.. .+...+...+.|+.|+|++|.++..
T Consensus 12 ~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~ 91 (167)
T d1pgva_ 12 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 91 (167)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hCCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHH
Confidence 45688999999974 46532 23356778899999999999862 2223455668899999999999843
Q ss_pred CchhhhCCCCCCEEeCCCCCCC
Q 009965 158 LPAELGNLISLEELHLDRNRLQ 179 (521)
Q Consensus 158 ~p~~~~~l~~L~~L~Ls~N~l~ 179 (521)
+-..+...++|++|+|++|.+.
T Consensus 92 l~~aL~~n~sL~~L~l~~n~~~ 113 (167)
T d1pgva_ 92 LLRSTLVTQSIVEFKADNQRQS 113 (167)
T ss_dssp HHHHTTTTCCCSEEECCCCSSC
T ss_pred HHHHHHhCCcCCEEECCCCcCC
Confidence 2335667789999999999765
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.99 E-value=6.7e-05 Score=63.87 Aligned_cols=110 Identities=17% Similarity=0.241 Sum_probs=76.5
Q ss_pred CCCEEEEEecC-CCCCcc----CCccccCCCCCCEEECcCCccccc----CCccccCCCCCcEEEccCCcCCCC----CC
Q 009965 69 RDRVLKINISG-SSLKGF----LAPELGLLTYLQELILHGNNLIGI----IPKELGLLKRLKILDLGTNQLTGP----IP 135 (521)
Q Consensus 69 ~~~l~~L~L~~-n~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p 135 (521)
.+.++.|+|++ +.++.. +-..+...++|++|+|++|.++.. +-..+...+.|+.|++++|.++.. +-
T Consensus 16 ~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~ 95 (166)
T d1io0a_ 16 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 95 (166)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHH
Confidence 35788899987 456532 334566788999999999988643 223456678899999999987632 22
Q ss_pred cccCCCccCceeec--ccccCcc----cCchhhhCCCCCCEEeCCCCCC
Q 009965 136 PEIGNLTGLVKINL--QSNGLTG----RLPAELGNLISLEELHLDRNRL 178 (521)
Q Consensus 136 ~~~~~l~~L~~L~L--s~N~l~g----~~p~~~~~l~~L~~L~Ls~N~l 178 (521)
..+...++|+.++| +.|.+.. .+...+...++|+.|+++.+..
T Consensus 96 ~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~~ 144 (166)
T d1io0a_ 96 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 144 (166)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCCCC
Confidence 45666788886544 5677753 3445566788999999987654
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=96.74 E-value=0.0027 Score=59.82 Aligned_cols=133 Identities=8% Similarity=0.037 Sum_probs=73.7
Q ss_pred eeEEEEEeCCCCEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCc--cceeeE-----EecCCCCceEEEEecCCC
Q 009965 372 SLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT--GKLLGY-----CRESSPFTRMLVFDYASN 444 (521)
Q Consensus 372 g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~ni--v~l~g~-----~~~~~~~~~~lv~ey~~~ 444 (521)
-.||+++.++|..+++|+..... ...+++..|...+..+....+ +..+.. ..... ..+.+++|+++
T Consensus 36 N~vy~v~~~dg~~~VlK~~rp~~-----~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~--~~~~l~~~~~G 108 (325)
T d1zyla1 36 NRVYQFQDEDRRRFVVKFYRPER-----WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQG--FYFAVFPSVGG 108 (325)
T ss_dssp SEEEEECCTTCCCEEEEEECTTT-----SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETT--EEEEEEECCCC
T ss_pred ceeEEEEcCCCCEEEEEEeCCCC-----CCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeee--EEEEEEeecCC
Confidence 47999999999999999864321 123457788888877743222 222111 11122 57889999976
Q ss_pred CChhh-----h---------hcc-------CCCCCCCHHH-------------------HHHHHHHHHHHHHHHh----c
Q 009965 445 GTLYE-----H---------LHY-------GERCQVSWTR-------------------RMKIVIGIARGLKYLH----T 480 (521)
Q Consensus 445 gsL~~-----~---------l~~-------~~~~~l~~~~-------------------~~~i~~~ia~gL~yLH----~ 480 (521)
..+.. + +|. ..+..+++.. +-.+...+.+.++.+. +
T Consensus 109 ~~~~~~~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 188 (325)
T d1zyla1 109 RQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWRE 188 (325)
T ss_dssp EECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCS
T ss_pred cCCCCCCHHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHhccc
Confidence 33221 1 110 0111222211 1112222223333332 2
Q ss_pred CCCCCeEecCCCCCCeeecCCCCeeeCCCchhh
Q 009965 481 ELGPPFTISELNSSAVYLTEDFSPKVSPLCLSF 513 (521)
Q Consensus 481 ~~~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~ 513 (521)
....+++|+|+.+.|||++++ ..+.||+-+.
T Consensus 189 ~~p~~liHgDlh~~NvL~~~~--~~~IDFdd~~ 219 (325)
T d1zyla1 189 DFTVLRLHGDCHAGNILWRDG--PMFVDLDDAR 219 (325)
T ss_dssp CSCCEECCSSCSGGGEEESSS--EEECCCTTCC
T ss_pred cCCceeecCCCCcccEEEeCC--ceEEechhcc
Confidence 223478999999999999754 5689998765
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=95.89 E-value=0.017 Score=55.63 Aligned_cols=72 Identities=13% Similarity=0.136 Sum_probs=45.1
Q ss_pred chhCcCCCeeEEEEEeCCC--------CEEEEEEeeeeccccchhhHHHHHHHHHHHhccCCCCc-cceeeEEecCCCCc
Q 009965 364 NIIGSSPDSLVYKGTMKGG--------PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT-GKLLGYCRESSPFT 434 (521)
Q Consensus 364 ~~ig~G~~g~Vy~~~~~~~--------~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~ 434 (521)
+.|+.|-.-.+|++..+++ ..|.+++.. .... .....+|..+++.+.-.++ .++++++. +
T Consensus 48 ~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~~~~-----~idr~~E~~i~~~ls~~gl~Pkll~~~~--~--- 116 (395)
T d1nw1a_ 48 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-NPET-----ESHLVAESVIFTLLSERHLGPKLYGIFS--G--- 116 (395)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-SCCC-----HHHHHHHHHHHHHHHHTTSSSCEEEEET--T---
T ss_pred EEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-Ccch-----hhHHHHHHHHHHHHHhCCCCCeEEEEcC--C---
Confidence 5677788889999987643 345555542 2111 1234578888887743344 46777663 2
Q ss_pred eEEEEecCCCCCh
Q 009965 435 RMLVFDYASNGTL 447 (521)
Q Consensus 435 ~~lv~ey~~~gsL 447 (521)
.+|+||+++-++
T Consensus 117 -g~I~efi~g~~l 128 (395)
T d1nw1a_ 117 -GRLEEYIPSRPL 128 (395)
T ss_dssp -EEEECCCCEEEC
T ss_pred -ceEEEEeccccC
Confidence 589999987444
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=95.87 E-value=0.012 Score=54.72 Aligned_cols=31 Identities=10% Similarity=0.099 Sum_probs=27.3
Q ss_pred CCCeEecCCCCCCeeecCCCCeeeCCCchhh
Q 009965 483 GPPFTISELNSSAVYLTEDFSPKVSPLCLSF 513 (521)
Q Consensus 483 ~~~ivH~Dlk~~NiLld~~~~~kl~DfGla~ 513 (521)
..++||+|+.+.||+++++...-|.||+.+.
T Consensus 182 ~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~ 212 (316)
T d2ppqa1 182 PAGVIHADLFQDNVFFLGDELSGLIDFYFAC 212 (316)
T ss_dssp CEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred ccccccCCcchhhhhcccccceeEecccccc
Confidence 3479999999999999998877899999764
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=95.54 E-value=0.0022 Score=53.97 Aligned_cols=117 Identities=21% Similarity=0.173 Sum_probs=73.9
Q ss_pred ccCCCCCCEEECcC-Cccccc----CCccccCCCCCcEEEccCCcCCCCC----CcccCCCccCceeecccccCccc---
Q 009965 90 LGLLTYLQELILHG-NNLIGI----IPKELGLLKRLKILDLGTNQLTGPI----PPEIGNLTGLVKINLQSNGLTGR--- 157 (521)
Q Consensus 90 l~~l~~L~~L~L~~-N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~~----p~~~~~l~~L~~L~Ls~N~l~g~--- 157 (521)
..+.+.|++|+|++ +.++.. +-..+...++|+.|+|++|.++... -..+...+.|+.|++++|.++..
T Consensus 13 ~~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~ 92 (166)
T d1io0a_ 13 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 92 (166)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHH
Confidence 45678999999987 456522 2344567889999999999886321 22345567899999999988632
Q ss_pred -CchhhhCCCCCCEEeCC--CCCCCccCCCCCCCcccccccccccccCCcCcccCCCCCCEEeccCCcc
Q 009965 158 -LPAELGNLISLEELHLD--RNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFF 223 (521)
Q Consensus 158 -~p~~~~~l~~L~~L~Ls--~N~l~g~~p~~~~~~~~~~l~~l~l~~n~l~~~~~l~~L~~L~ls~N~l 223 (521)
+-..+...++|+.++|+ .|.+....-. .+. ..+...++|+.|+++.|..
T Consensus 93 ~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~--------~La---------~~L~~n~~L~~L~l~~~~~ 144 (166)
T d1io0a_ 93 ALVEALQSNTSLIELRIDNQSQPLGNNVEM--------EIA---------NMLEKNTTLLKFGYHFTQQ 144 (166)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCCCHHHHH--------HHH---------HHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHhCccccEEeeccCCCcCcHHHHH--------HHH---------HHHHhCCCcCEEeCcCCCC
Confidence 23456677888876664 4555311000 000 0123356789999887754
|